MELO3C003884 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003884
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTetratricopeptide repeat-like superfamily protein, putative isoform 1
Locationchr4 : 6150599 .. 6151219 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTCGTAACCTCCTCTGTCTTCTTCTTCGTCCGGTGAGTATTCGACGTCAGACGAATCTTCAACTTCCGGCCACGGTTCGACTTCTACCCAGGTTGGAGTTCCGCCCACATTCGACTTTCGCCCAATCTTCTGACAGCTGTTTGTCATTGGAGTTCGCCGCCACTGAGTTCTTTATCTTTGTTTTTTCGTTTCTTCTCTCTCTTGGATTTGTTCGTGGTGGAACTGTAGATGAGTTAAATTTACTTGGGAATAAAAATTGGGGGAAAGAGGAAATTTTGAGGTTTCTCGCTGAGAATTTAAGAAATTTGGAGAAGTTTTTTTATGGGTTTGCTGTCAAACTTGATAATTTGAAATGTATCATACAGAGCACCATTGATTCTAGAGAAATTACACTTGAGGATTTTCAACCTCCACTTGCTTCGAAGGTTGTTGAGGCCTTGATTAATAATGGAGGCAACACCAAAGTTGTTTTTCTTGAGAATTATAAACCAAGTAGGAAAATTAAAGACCTAGGAGATGTGGGGTTTGAGCTTTTGCAATCCTTTGGCAGTTTGCTTGGAGAAAAGTTGGTTGGTTCTAAGCCTAACAAAGTGAAAAACAATGTTAACCCATAA

mRNA sequence

ATGAGGATTCGTAACCTCCTCTGTCTTCTTCTTCGTCCGGTGAGTATTCGACGTCAGACGAATCTTCAACTTCCGGCCACGGTTCGACTTCTACCCAGGTTGGAGTTCCGCCCACATTCGACTTTCGCCCAATCTTCTGACAGCTGTTTGTCATTGGAGTTCGCCGCCACTGAGTTCTTTATCTTTGTTTTTTCGTTTCTTCTCTCTCTTGGATTTGTTCGTGGTGGAACTGTAGATGAGTTAAATTTACTTGGGAATAAAAATTGGGGGAAAGAGGAAATTTTGAGGTTTCTCGCTGAGAATTTAAGAAATTTGGAGAAGTTTTTTTATGGGTTTGCTGTCAAACTTGATAATTTGAAATGTATCATACAGAGCACCATTGATTCTAGAGAAATTACACTTGAGGATTTTCAACCTCCACTTGCTTCGAAGGTTGTTGAGGCCTTGATTAATAATGGAGGCAACACCAAAGTTGTTTTTCTTGAGAATTATAAACCAAGTAGGAAAATTAAAGACCTAGGAGATGTGGGGTTTGAGCTTTTGCAATCCTTTGGCAGTTTGCTTGGAGAAAAGTTGGTTGGTTCTAAGCCTAACAAAGTGAAAAACAATGTTAACCCATAA

Coding sequence (CDS)

ATGAGGATTCGTAACCTCCTCTGTCTTCTTCTTCGTCCGGTGAGTATTCGACGTCAGACGAATCTTCAACTTCCGGCCACGGTTCGACTTCTACCCAGGTTGGAGTTCCGCCCACATTCGACTTTCGCCCAATCTTCTGACAGCTGTTTGTCATTGGAGTTCGCCGCCACTGAGTTCTTTATCTTTGTTTTTTCGTTTCTTCTCTCTCTTGGATTTGTTCGTGGTGGAACTGTAGATGAGTTAAATTTACTTGGGAATAAAAATTGGGGGAAAGAGGAAATTTTGAGGTTTCTCGCTGAGAATTTAAGAAATTTGGAGAAGTTTTTTTATGGGTTTGCTGTCAAACTTGATAATTTGAAATGTATCATACAGAGCACCATTGATTCTAGAGAAATTACACTTGAGGATTTTCAACCTCCACTTGCTTCGAAGGTTGTTGAGGCCTTGATTAATAATGGAGGCAACACCAAAGTTGTTTTTCTTGAGAATTATAAACCAAGTAGGAAAATTAAAGACCTAGGAGATGTGGGGTTTGAGCTTTTGCAATCCTTTGGCAGTTTGCTTGGAGAAAAGTTGGTTGGTTCTAAGCCTAACAAAGTGAAAAACAATGTTAACCCATAA

Protein sequence

MRIRNLLCLLLRPVSIRRQTNLQLPATVRLLPRLEFRPHSTFAQSSDSCLSLEFAATEFFIFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLKCIIQSTIDSREITLEDFQPPLASKVVEALINNGGNTKVVFLENYKPSRKIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVNP*
Homology
[Close]
BLAST of MELO3C003884 vs. TrEMBL
Match: A0A0A0KNA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517240 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.7e-55
Identity = 119/158 (75.32%), Postives = 126/158 (79.75%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           +FVF+   SLGFVRGG++DELNLLGNKN GKEEI  F AENLRNLEKFF GFAVKLDNLK
Sbjct: 118 VFVFAVGFSLGFVRGGSIDELNLLGNKNRGKEEISGFHAENLRNLEKFFDGFAVKLDNLK 177

Query: 121 CIIQSTIDSREITL------------EDFQPPLASKVVEALINNGGNTKVVFLENYKPSR 180
           C IQ+ IDSREITL             DF    ASKVVEALI NGG +K V LEN+KPSR
Sbjct: 178 CSIQNAIDSREITLTDLESYVKILESSDFSTSNASKVVEALIYNGGKSKAVILENHKPSR 237

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVNP 207
           KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV P
Sbjct: 238 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVKP 275

[Close]
BLAST of MELO3C003884 vs. TrEMBL
Match: A0A061GFU9_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029901 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.7e-23
Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + VF    S GFV+GG+ +EL+    K   KEEILR  ++ LRNL  FF+GF V+++ LK
Sbjct: 132 VLVFGIGFSFGFVKGGSFNELS--STKRRSKEEILRVYSDKLRNLANFFHGFDVQVNKLK 191

Query: 121 CIIQSTIDSREITLEDFQPPL------------ASKVVEALINNGGNTKVVFLENYKPSR 180
             IQ  IDS  IT+ D +  +            A  VVEA ++N GN+   + EN KPS 
Sbjct: 192 NNIQRAIDSSRITISDLENYVSLVESMRLSASNARNVVEAAVDNVGNS---YRENQKPSS 251

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV 205
           K K+ G+VG +LLQ  G+  GEK V S PNKVK++V
Sbjct: 252 KKKEAGEVGLQLLQYLGNFFGEKSVASNPNKVKDDV 282

[Close]
BLAST of MELO3C003884 vs. TrEMBL
Match: B9RZ72_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0935960 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-22
Identity = 70/158 (44.30%), Postives = 93/158 (58.86%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + +F+   SLGF RGG + EL+   +K   K+EI R  +E LR+L  FF GF VK+++LK
Sbjct: 132 VLIFAIGFSLGFFRGGNLIELSANASKKRAKDEIFRVCSERLRSLVGFFDGFDVKVNDLK 191

Query: 121 CIIQSTIDSREITLEDFQPPL------------ASKVVEALINNGGNTKVVFLENYKPS- 180
             IQ  ID++EI L D +  +            +  VVE+ I   GN+  V  EN K S 
Sbjct: 192 NYIQRVIDTKEIELGDLENYISVIESLQASALNSRNVVESTIVGVGNSSSVLAENQKSSV 251

Query: 181 RKIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVN 206
           RK K++G+VGF LLQ  G L GEKLV SKP KVK+  N
Sbjct: 252 RKKKEIGEVGFGLLQFVGGLFGEKLVDSKPPKVKDKDN 289

[Close]
BLAST of MELO3C003884 vs. TrEMBL
Match: A0A0B0MT61_GOSAR (Prolyl endopeptidase OS=Gossypium arboreum GN=F383_27732 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.1e-21
Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           I VF    S GFV+GG+ ++L+   NK   KEE  R  +E LR+L  FFYGF +K++NLK
Sbjct: 127 ILVFGVGFSFGFVKGGSFNDLS--SNKRRSKEESSRVYSEKLRSLVDFFYGFDIKINNLK 186

Query: 121 CIIQSTIDSREITLEDFQ------------PPLASKVVEALINNGGNTKVVFLENYKPSR 180
             IQ  IDS  I + D +               A  VVEA ++N GN    + EN KPS 
Sbjct: 187 NNIQRAIDSNRINVADLENYANLVESMRLSASNAKNVVEASMDNVGNP---YRENKKPSS 246

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV 205
           + KD G+  FELL   G+L GEK V SKPNKV + +
Sbjct: 247 RKKDAGEARFELLHFLGALFGEKQVASKPNKVTDTI 277

[Close]
BLAST of MELO3C003884 vs. TrEMBL
Match: A0A067JDV8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21419 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.4e-21
Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + +F    SLGF RGG+ +E++   +K   KEEI+R  +E L++L  FF GF VK+++LK
Sbjct: 85  VLIFGIGFSLGFFRGGSFNEVSGSASKKRAKEEIIRVYSERLKSLVGFFDGFDVKVNDLK 144

Query: 121 CIIQSTIDSREITLEDFQPPL------------ASKVVEALINNGGNTKVVFLENYKPS- 180
             IQ  + + EI L D +  +            +   VEA I++ GN+  V +EN K S 
Sbjct: 145 NAIQRAVHTEEIELVDLENYISVLESVQASALNSRNEVEATIDSVGNSSNVLIENPKSSG 204

Query: 181 RKIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVN 206
           RK K++G+ GFE+LQ  G L GEK+V SKPNK K+  N
Sbjct: 205 RKKKEIGEAGFEMLQFLGGLFGEKMVDSKPNKGKDKDN 242

[Close]
BLAST of MELO3C003884 vs. NCBI nr
Match: gi|659078731|ref|XP_008439876.1| (PREDICTED: uncharacterized protein LOC103484532 [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 2.5e-56
Identity = 121/158 (76.58%), Postives = 128/158 (81.01%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           +FVF+   SLGFVRGG++DELNLLGNKN GKEEI  + AENLRNLEKFF GFAVKLDNLK
Sbjct: 118 VFVFAVGFSLGFVRGGSIDELNLLGNKNRGKEEISGYHAENLRNLEKFFDGFAVKLDNLK 177

Query: 121 CIIQSTIDSREITL------------EDFQPPLASKVVEALINNGGNTKVVFLENYKPSR 180
           C IQ+ IDSREITL             DF    ASKVVEALINNGGNTK V LEN+KPSR
Sbjct: 178 CSIQNAIDSREITLGDLESYVKVLESSDFSTSNASKVVEALINNGGNTKAVILENHKPSR 237

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVNP 207
           KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV P
Sbjct: 238 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVKP 275

[Close]
BLAST of MELO3C003884 vs. NCBI nr
Match: gi|778720773|ref|XP_004134717.2| (PREDICTED: uncharacterized protein LOC101207805 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.4e-54
Identity = 119/158 (75.32%), Postives = 126/158 (79.75%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           +FVF+   SLGFVRGG++DELNLLGNKN GKEEI  F AENLRNLEKFF GFAVKLDNLK
Sbjct: 118 VFVFAVGFSLGFVRGGSIDELNLLGNKNRGKEEISGFHAENLRNLEKFFDGFAVKLDNLK 177

Query: 121 CIIQSTIDSREITL------------EDFQPPLASKVVEALINNGGNTKVVFLENYKPSR 180
           C IQ+ IDSREITL             DF    ASKVVEALI NGG +K V LEN+KPSR
Sbjct: 178 CSIQNAIDSREITLTDLESYVKILESSDFSTSNASKVVEALIYNGGKSKAVILENHKPSR 237

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVNP 207
           KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV P
Sbjct: 238 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVKP 275

[Close]
BLAST of MELO3C003884 vs. NCBI nr
Match: gi|1009109247|ref|XP_015889077.1| (PREDICTED: uncharacterized protein LOC107423934 [Ziziphus jujuba])

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 68/155 (43.87%), Postives = 90/155 (58.06%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + VF+   S+G VRGG + E+NL GNK   KEEI R   E LRNL + F GF V++ NLK
Sbjct: 216 VLVFAIGFSIGAVRGGGIGEVNLTGNKRRAKEEIFRVYTEKLRNLVEVFNGFDVEVSNLK 275

Query: 121 CIIQSTIDSREITLEDFQ------------PPLASKVVEALINNGGNTKVVFLENYKPSR 180
             IQ  IDSREIT+ D +               A   +E  I + G++ V F E+ KP++
Sbjct: 276 HNIQKAIDSREITVVDLENYVKVVESISLSASSAKSTLEVSIQDVGSSSVQF-EDQKPAK 335

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNN 204
           + K+L ++G+E LQS   L GE    SKP KVKNN
Sbjct: 336 RKKELSEIGYEFLQSCRGLFGENFADSKPTKVKNN 369

[Close]
BLAST of MELO3C003884 vs. NCBI nr
Match: gi|590624664|ref|XP_007025666.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 115.9 bits (289), Expect = 8.2e-23
Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + VF    S GFV+GG+ +EL+    K   KEEILR  ++ LRNL  FF+GF V+++ LK
Sbjct: 132 VLVFGIGFSFGFVKGGSFNELS--STKRRSKEEILRVYSDKLRNLANFFHGFDVQVNKLK 191

Query: 121 CIIQSTIDSREITLEDFQPPL------------ASKVVEALINNGGNTKVVFLENYKPSR 180
             IQ  IDS  IT+ D +  +            A  VVEA ++N GN+   + EN KPS 
Sbjct: 192 NNIQRAIDSSRITISDLENYVSLVESMRLSASNARNVVEAAVDNVGNS---YRENQKPSS 251

Query: 181 KIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNV 205
           K K+ G+VG +LLQ  G+  GEK V S PNKVK++V
Sbjct: 252 KKKEAGEVGLQLLQYLGNFFGEKSVASNPNKVKDDV 282

[Close]
BLAST of MELO3C003884 vs. NCBI nr
Match: gi|255556013|ref|XP_002519041.1| (PREDICTED: uncharacterized protein LOC8279482 [Ricinus communis])

HSP 1 Score: 112.5 bits (280), Expect = 9.1e-22
Identity = 70/158 (44.30%), Postives = 93/158 (58.86%), Query Frame = 1 

Query: 61  IFVFSFLLSLGFVRGGTVDELNLLGNKNWGKEEILRFLAENLRNLEKFFYGFAVKLDNLK 120
           + +F+   SLGF RGG + EL+   +K   K+EI R  +E LR+L  FF GF VK+++LK
Sbjct: 132 VLIFAIGFSLGFFRGGNLIELSANASKKRAKDEIFRVCSERLRSLVGFFDGFDVKVNDLK 191

Query: 121 CIIQSTIDSREITLEDFQPPL------------ASKVVEALINNGGNTKVVFLENYKPS- 180
             IQ  ID++EI L D +  +            +  VVE+ I   GN+  V  EN K S 
Sbjct: 192 NYIQRVIDTKEIELGDLENYISVIESLQASALNSRNVVESTIVGVGNSSSVLAENQKSSV 251

Query: 181 RKIKDLGDVGFELLQSFGSLLGEKLVGSKPNKVKNNVN 206
           RK K++G+VGF LLQ  G L GEKLV SKP KVK+  N
Sbjct: 252 RKKKEIGEVGFGLLQFVGGLFGEKLVDSKPPKVKDKDN 289

The following BLAST results are available for this feature:
BLAST of MELO3C003884 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNA8_CUCSA9.7e-5575.32Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517240 PE=4 SV=1[more]
A0A061GFU9_THECC5.7e-2344.23Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobro... [more]
B9RZ72_RICCO6.3e-2244.30Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0935960 PE=4 SV=1[more]
A0A0B0MT61_GOSAR4.1e-2143.59Prolyl endopeptidase OS=Gossypium arboreum GN=F383_27732 PE=4 SV=1[more]
A0A067JDV8_JATCU5.4e-2141.14Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21419 PE=4 SV=1[more]
BLAST of MELO3C003884 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078731|ref|XP_008439876.1|2.5e-5676.58PREDICTED: uncharacterized protein LOC103484532 [Cucumis melo][more]
gi|778720773|ref|XP_004134717.2|1.4e-5475.32PREDICTED: uncharacterized protein LOC101207805 [Cucumis sativus][more]
gi|1009109247|ref|XP_015889077.1|2.8e-2343.87PREDICTED: uncharacterized protein LOC107423934 [Ziziphus jujuba][more]
gi|590624664|ref|XP_007025666.1|8.2e-2344.23Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma... [more]
gi|255556013|ref|XP_002519041.1|9.1e-2244.30PREDICTED: uncharacterized protein LOC8279482 [Ricinus communis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003884T1MELO3C003884T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003884Cucurbita pepo (Zucchini)cpemeB516
MELO3C003884Cucurbita pepo (Zucchini)cpemeB726
MELO3C003884Bottle gourd (USVL1VR-Ls)lsimeB311
MELO3C003884Cucumber (Gy14) v2cgybmeB185
MELO3C003884Silver-seed gourdcarmeB0106
MELO3C003884Silver-seed gourdcarmeB0928
MELO3C003884Cucumber (Chinese Long) v3cucmeB219
MELO3C003884Watermelon (97103) v2mewmbB332
MELO3C003884Wax gourdmewgoB384
MELO3C003884Cucumber (Gy14) v1cgymeB559
MELO3C003884Cucurbita maxima (Rimu)cmameB032
MELO3C003884Cucurbita maxima (Rimu)cmameB424
MELO3C003884Cucurbita moschata (Rifu)cmomeB021
MELO3C003884Cucurbita moschata (Rifu)cmomeB414
MELO3C003884Wild cucumber (PI 183967)cpimeB215
MELO3C003884Cucumber (Chinese Long) v2cumeB222
MELO3C003884Watermelon (Charleston Gray)mewcgB331
MELO3C003884Watermelon (97103) v1mewmB368