MELO3C003843 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003843
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glutathione S-transferase,-like protein
Location	chr4 : 5476065 .. 5476286 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATGCAGTTCACTTCAAGTGCAACAAGAAACTACTGAGAGAGTATTCAAATCTGTTCGATTACACCAAAGATATATACCAAACTAAAGGGGTAGACAGCTCTGTTAATATGGAACATATAAAGAAGCATTATTATGGAAGCCATCCTACAATCAATCCATTTGGAATGATCCCTCTTGGCCCAAATATTGATTACTCTTCTCCTCGTGATTATAGATAG

mRNA sequence

GTTTATGCAGTTCACTTCAAGTGCAACAAGAAACTACTGAGAGAGTATTCAAATCTGTTCGATTACACCAAAGATATATACCAAACTAAAGGGGTAGACAGCTCTGTTAATATGGAACATATAAAGAAGCATTATTATGGAAGCCATCCTACAATCAATCCATTTGGAATGATCCCTCTTGGCCCAAATATTGATTACTCTTCTCCTCGTGATTATAGATAG

Coding sequence (CDS)

GTTTATGCAGTTCACTTCAAGTGCAACAAGAAACTACTGAGAGAGTATTCAAATCTGTTCGATTACACCAAAGATATATACCAAACTAAAGGGGTAGACAGCTCTGTTAATATGGAACATATAAAGAAGCATTATTATGGAAGCCATCCTACAATCAATCCATTTGGAATGATCCCTCTTGGCCCAAATATTGATTACTCTTCTCCTCGTGATTATAGATAG

Protein sequence

VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPLGPNIDYSSPRDYR*

Homology

[Close]

BLAST of MELO3C003843 vs. Swiss-Prot
Match: YQJG_ECOLI (Glutathionyl-hydroquinone reductase YqjG OS=Escherichia coli (strain K12) GN=yqjG PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-15
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VY  HFKC+K  + +Y NL+ + +DIYQ  G+  +VN +HI+ HY+ SH TINP G+I +
Sbjct: 252 VYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISI 311

Query: 61  GPNIDYSSP--RDYR 74
           GP  D   P  RD R
Sbjct: 312 GPWQDLDEPHGRDVR 326

[Close]

BLAST of MELO3C003843 vs. TrEMBL
Match: A0A0A0M0U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701990 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.4e-33
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREYSNLF+YTKDIYQTKGV SSVNMEHIKKHYYGSHPTINPFG+IPL
Sbjct: 249 VYAVHFKCNKKLLREYSNLFNYTKDIYQTKGVGSSVNMEHIKKHYYGSHPTINPFGIIPL 308

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 309 GPNIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. TrEMBL
Match: A0A068URV3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033358001 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-28
Identity = 59/71 (83.10%), Postives = 65/71 (91.55%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREY NLF+YTKDI+Q  GV S+VNMEHIKKHYYGSHP+INPFG+IP 
Sbjct: 288 VYAVHFKCNKKLLREYPNLFNYTKDIFQIPGVSSTVNMEHIKKHYYGSHPSINPFGIIPQ 347

Query: 61  GPNIDYSSPRD 72
           GP+IDYSSP D
Sbjct: 348 GPDIDYSSPHD 358

[Close]

BLAST of MELO3C003843 vs. TrEMBL
Match: M1ANN8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010333 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-28
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREY NLF+YTKDI+Q  G+ S+VNMEHIKKHYYGSHP INPFG+IP 
Sbjct: 249 VYAVHFKCNKKLLREYPNLFNYTKDIFQIPGMSSTVNMEHIKKHYYGSHPGINPFGIIPQ 308

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 309 GPNIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. TrEMBL
Match: A0A0V0I3X2_SOLCH (Putative glutathione S-transferase omega-like 2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-28
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREY NLF+YTKDI+Q  G+ S+VNMEHIKKHYYGSHP INPFG+IP 
Sbjct: 241 VYAVHFKCNKKLLREYPNLFNYTKDIFQIPGMSSTVNMEHIKKHYYGSHPGINPFGIIPQ 300

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 301 GPNIDYSSPHD 311

[Close]

BLAST of MELO3C003843 vs. TrEMBL
Match: A0A0U4J960_LITCN (GST8 OS=Litchi chinensis PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-28
Identity = 57/71 (80.28%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREY NLF+YTKDIYQ  G+ S+VNM+HIK+HYYGSHP+INP+G+IPL
Sbjct: 249 VYAVHFKCNKKLLREYPNLFNYTKDIYQIPGMSSTVNMQHIKRHYYGSHPSINPYGIIPL 308

Query: 61  GPNIDYSSPRD 72
           GP+IDYSSP D
Sbjct: 309 GPDIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. TAIR10
Match: AT5G45020.1 (AT5G45020.1 Glutathione S-transferase family protein)

HSP 1 Score: 130.6 bits (327), Expect = 4.1e-31
Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNK+LLREY N+F+Y KDIYQ  G+ S+VNMEHIK+HYYGSHPTINPFG+IP 
Sbjct: 249 VYAVHFKCNKRLLREYPNIFNYIKDIYQIHGMSSTVNMEHIKQHYYGSHPTINPFGIIPH 308

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 309 GPNIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. TAIR10
Match: AT4G19880.2 (AT4G19880.2 Glutathione S-transferase family protein)

HSP 1 Score: 127.9 bits (320), Expect = 2.6e-30
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKL+REY NLF+YTKDI+Q  G+ S+VNM HIK+HYYGSHP+INPFG+IP 
Sbjct: 306 VYAVHFKCNKKLIREYPNLFNYTKDIFQIPGMSSTVNMNHIKQHYYGSHPSINPFGIIPH 365

Query: 61  GPNIDYSSPRD 72
           GPNIDY+SP D
Sbjct: 366 GPNIDYTSPHD 376

[Close]

BLAST of MELO3C003843 vs. TAIR10
Match: AT5G44990.1 (AT5G44990.1 Glutathione S-transferase family protein)

HSP 1 Score: 100.5 bits (249), Expect = 4.5e-22
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 2   YAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPLG 61
           YAV FKC+K+L+REY +LF+YTKDIYQ  G+ S+V M+HIK++YYGS P+INP  +I  G
Sbjct: 247 YAVIFKCDKRLVREYYHLFNYTKDIYQIAGMSSTVKMDHIKQNYYGSFPSINPLEIIAHG 306

Query: 62  PNIDYSSPRD 72
           PNIDYS P D
Sbjct: 307 PNIDYSLPHD 316

[Close]

BLAST of MELO3C003843 vs. TAIR10
Match: AT5G44000.1 (AT5G44000.1 Glutathione S-transferase family protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-06
Identity = 27/71 (38.03%), Postives = 36/71 (50.70%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VY + FKC KK L EY NL+ Y ++IYQ  GV ++ ++  I   YY    T+ P     +
Sbjct: 311 VYNILFKCTKKKLVEYPNLYGYLREIYQIPGVAATCDISAIMDGYY---KTLFPLNASGI 370

Query: 61  GPNIDYSSPRD 72
            P I  S  +D
Sbjct: 371 QPAISSSGDQD 378

[Close]

BLAST of MELO3C003843 vs. NCBI nr
Match: gi|449455407|ref|XP_004145444.1| (PREDICTED: glutathione S-transferase omega-like 2 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREYSNLF+YTKDIYQTKGV SSVNMEHIKKHYYGSHPTINPFG+IPL
Sbjct: 249 VYAVHFKCNKKLLREYSNLFNYTKDIYQTKGVGSSVNMEHIKKHYYGSHPTINPFGIIPL 308

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 309 GPNIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. NCBI nr
Match: gi|659118292|ref|XP_008459045.1| (PREDICTED: glutathione S-transferase omega-like 2 isoform X2 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREYSNLF+YTKDIYQTKGV SSVNMEHIKKHYYGSHPTINPFG+IPL
Sbjct: 249 VYAVHFKCNKKLLREYSNLFNYTKDIYQTKGVGSSVNMEHIKKHYYGSHPTINPFGIIPL 308

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 309 GPNIDYSSPHD 319

[Close]

BLAST of MELO3C003843 vs. NCBI nr
Match: gi|659118290|ref|XP_008459044.1| (PREDICTED: glutathione S-transferase omega-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREYSNLF+YTKDIYQTKGV SSVNMEHIKKHYYGSHPTINPFG+IPL
Sbjct: 259 VYAVHFKCNKKLLREYSNLFNYTKDIYQTKGVGSSVNMEHIKKHYYGSHPTINPFGIIPL 318

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 319 GPNIDYSSPHD 329

[Close]

BLAST of MELO3C003843 vs. NCBI nr
Match: gi|743771606|ref|XP_010916094.1| (PREDICTED: LOW QUALITY PROTEIN: glutathione S-transferase omega-like 2 [Elaeis guineensis])

HSP 1 Score: 134.8 bits (338), Expect = 6.1e-29
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNKKLLREY NLF+YTKDIYQ  G+ S+VNMEHIKKHYYGSHPTIN +G+IPL
Sbjct: 269 VYAVHFKCNKKLLREYPNLFNYTKDIYQIPGMSSTVNMEHIKKHYYGSHPTINTYGIIPL 328

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 329 GPNIDYSSPHD 339

[Close]

BLAST of MELO3C003843 vs. NCBI nr
Match: gi|727648014|ref|XP_010494562.1| (PREDICTED: glutathione S-transferase omega-like 2 [Camelina sativa])

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28
Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 1


Query: 1   VYAVHFKCNKKLLREYSNLFDYTKDIYQTKGVDSSVNMEHIKKHYYGSHPTINPFGMIPL 60
           VYAVHFKCNK+LLREY N+F+Y KDIYQ KG+ S+VNMEHIK+HYYGSHPTINPFG+IP 
Sbjct: 247 VYAVHFKCNKRLLREYPNIFNYIKDIYQIKGMSSTVNMEHIKQHYYGSHPTINPFGIIPH 306

Query: 61  GPNIDYSSPRD 72
           GPNIDYSSP D
Sbjct: 307 GPNIDYSSPHD 317

The following BLAST results are available for this feature:

BLAST of MELO3C003843 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YQJG_ECOLI	5.0e-15	48.00	Glutathionyl-hydroquinone reductase YqjG OS=Escherichia coli (strain K12) GN=yqj...	[more]

BLAST of MELO3C003843 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0U0_CUCSA	6.4e-33	94.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701990 PE=4 SV=1	[more]
A0A068URV3_COFCA	1.6e-28	83.10	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033358001 PE=4 SV=1	[more]
M1ANN8_SOLTU	2.1e-28	83.10	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010333 PE=4 SV=1	[more]
A0A0V0I3X2_SOLCH	2.1e-28	83.10	Putative glutathione S-transferase omega-like 2-like OS=Solanum chacoense PE=4 S...	[more]
A0A0U4J960_LITCN	2.8e-28	80.28	GST8 OS=Litchi chinensis PE=2 SV=1	[more]

BLAST of MELO3C003843 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45020.1	4.1e-31	80.28	Glutathione S-transferase family protein	[more]
AT4G19880.2	2.6e-30	77.46	Glutathione S-transferase family protein	[more]
AT5G44990.1	4.5e-22	64.29	Glutathione S-transferase family protein	[more]
AT5G44000.1	1.2e-06	38.03	Glutathione S-transferase family protein	[more]

BLAST of MELO3C003843 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455407\|ref\|XP_004145444.1\|	9.1e-33	94.37	PREDICTED: glutathione S-transferase omega-like 2 [Cucumis sativus]	[more]
gi\|659118292\|ref\|XP_008459045.1\|	9.1e-33	94.37	PREDICTED: glutathione S-transferase omega-like 2 isoform X2 [Cucumis melo]	[more]
gi\|659118290\|ref\|XP_008459044.1\|	9.1e-33	94.37	PREDICTED: glutathione S-transferase omega-like 2 isoform X1 [Cucumis melo]	[more]
gi\|743771606\|ref\|XP_010916094.1\|	6.1e-29	84.51	PREDICTED: LOW QUALITY PROTEIN: glutathione S-transferase omega-like 2 [Elaeis g...	[more]
gi\|727648014\|ref\|XP_010494562.1\|	2.3e-28	81.69	PREDICTED: glutathione S-transferase omega-like 2 [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010987	Glutathione-S-Trfase_C-like
IPR016639	GST_Omega/GSH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003843T1	MELO3C003843T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010987	Glutathione S-transferase, C-terminal-like	unknown	SSF47616	GST C-terminal domain-like	coord: 5..72 score: 2.96
IPR016639	Glutathione S-transferase (GST)	PANTHER	PTHR32419	FAMILY NOT NAMED	coord: 1..71 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C003843	Cucurbita pepo (Zucchini)	cpemeB516
MELO3C003843	Cucurbita pepo (Zucchini)	cpemeB726
MELO3C003843	Bottle gourd (USVL1VR-Ls)	lsimeB142
MELO3C003843	Bottle gourd (USVL1VR-Ls)	lsimeB311
MELO3C003843	Cucumber (Gy14) v2	cgybmeB185
MELO3C003843	Cucumber (Gy14) v2	cgybmeB427
MELO3C003843	Silver-seed gourd	carmeB0106
MELO3C003843	Silver-seed gourd	carmeB0928
MELO3C003843	Cucumber (Chinese Long) v3	cucmeB219
MELO3C003843	Cucumber (Chinese Long) v3	cucmeB498
MELO3C003843	Watermelon (97103) v2	mewmbB315
MELO3C003843	Watermelon (97103) v2	mewmbB332
MELO3C003843	Wax gourd	mewgoB384
MELO3C003843	Wax gourd	mewgoB425
MELO3C003843	Melon (DHL92) v3.5.1	memeB145
MELO3C003843	Cucumber (Gy14) v1	cgymeB202
MELO3C003843	Cucumber (Gy14) v1	cgymeB559
MELO3C003843	Cucurbita maxima (Rimu)	cmameB032
MELO3C003843	Cucurbita maxima (Rimu)	cmameB424
MELO3C003843	Cucurbita moschata (Rifu)	cmomeB021
MELO3C003843	Cucurbita moschata (Rifu)	cmomeB414
MELO3C003843	Wild cucumber (PI 183967)	cpimeB215
MELO3C003843	Wild cucumber (PI 183967)	cpimeB488
MELO3C003843	Cucumber (Chinese Long) v2	cumeB222
MELO3C003843	Cucumber (Chinese Long) v2	cumeB485
MELO3C003843	Watermelon (Charleston Gray)	mewcgB326
MELO3C003843	Watermelon (Charleston Gray)	mewcgB331
MELO3C003843	Watermelon (97103) v1	mewmB368
MELO3C003843	Watermelon (97103) v1	mewmB378