MELO3C003584 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003584
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr4 : 2458911 .. 2459560 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAACGCCATAAAGATCTTAAACAAAATGTGTGAATATGGAGTTTCTCCTAATCTGAAGACATTTGAGACTATAATATGCGGATATGGAGAGGCAAAACAGCCATGGAAGGCAGAAGAAATGCTTCAAATAATGGAGGAATATGAAATTAAACCTGAGAAATCTACCATCTTATTAGTTGCAGAAGCCTGGCGCTCTATTGGATTGACAAAAGAAGCAAACAGAGTTATAGGCATTATGAAACGCATGGAAAGCTCTGACCAAACAGAGACGAAGAACGAGATGCAGGCGGAGAACTCGGACAAGTTCTATAAGAAGCAGCTTTCTGGTACCTCTCATACAAATATATTGCAGATACCGAACGCGGTTGGTCAAAAAGGCTCAACCACTGGAAATAAAAGAAACCGTGTCTTATTAAGAGATGTTGATTCTTCTTTAGAATGTTCGTGGCTAGCAACAAAATCCATTTACCAATCTCGCATTTGCAAGTTTGGGGAAAGATTTCCTATCATCTCTCGAAAGCAGCCGCAAGCACAAATTGGTATGTACAGTCATTTCACACGTTCATGTTCACTTGTGACACTGATATAATCATTTCACACATTCATGTACAGTCGTGACATTGATGTAAAGGTCAACATAGATGA

mRNA sequence

ATGGATAACGCCATAAAGATCTTAAACAAAATGTGTGAATATGGAGTTTCTCCTAATCTGAAGACATTTGAGACTATAATATGCGGATATGGAGAGGCAAAACAGCCATGGAAGGCAGAAGAAATGCTTCAAATAATGGAGGAATATGAAATTAAACCTGAGAAATCTACCATCTTATTAGTTGCAGAAGCCTGGCGCTCTATTGGATTGACAAAAGAAGCAAACAGAGTTATAGGCATTATGAAACGCATGGAAAGCTCTGACCAAACAGAGACGAAGAACGAGATGCAGGCGGAGAACTCGGACAAGTTCTATAAGAAGCAGCTTTCTGGTACCTCTCATACAAATATATTGCAGATACCGAACGCGGTTGGTCAAAAAGGCTCAACCACTGGAAATAAAAGAAACCGTGTCTTATTAAGAGATGTTGATTCTTCTTTAGAATGTTCGTGGCTAGCAACAAAATCCATTTACCAATCTCGCATTTGCAAGTTTGGGGAAAGATTTCCTATCATCTCTCGAAAGCAGCCGCAAGCACAAATTGGTCAACATAGATGA

Coding sequence (CDS)

ATGGATAACGCCATAAAGATCTTAAACAAAATGTGTGAATATGGAGTTTCTCCTAATCTGAAGACATTTGAGACTATAATATGCGGATATGGAGAGGCAAAACAGCCATGGAAGGCAGAAGAAATGCTTCAAATAATGGAGGAATATGAAATTAAACCTGAGAAATCTACCATCTTATTAGTTGCAGAAGCCTGGCGCTCTATTGGATTGACAAAAGAAGCAAACAGAGTTATAGGCATTATGAAACGCATGGAAAGCTCTGACCAAACAGAGACGAAGAACGAGATGCAGGCGGAGAACTCGGACAAGTTCTATAAGAAGCAGCTTTCTGGTACCTCTCATACAAATATATTGCAGATACCGAACGCGGTTGGTCAAAAAGGCTCAACCACTGGAAATAAAAGAAACCGTGTCTTATTAAGAGATGTTGATTCTTCTTTAGAATGTTCGTGGCTAGCAACAAAATCCATTTACCAATCTCGCATTTGCAAGTTTGGGGAAAGATTTCCTATCATCTCTCGAAAGCAGCCGCAAGCACAAATTGGTCAACATAGATGA

Protein sequence

MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQIPNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQIGQHR*

Homology

[Close]

BLAST of MELO3C003584 vs. Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-31
Identity = 79/182 (43.41%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD+A+++ NKMC++GVSPN+KTFET++ GY E KQPWKAEE+LQ+M    +KPE ST LL
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 474

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR  GLT E+N+ I  +K            +++    +K Y+KQ SG+S  N+LQI
Sbjct: 475 LAEAWRVAGLTDESNKAINALK----------CKDIEIAKLEKLYQKQSSGSSF-NLLQI 534

Query: 121 PNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQ 180
           P  VG++   T    N                          CK G R PII +KQ QAQ
Sbjct: 535 P--VGKRELPTAKAMN-----------------------LSACKLGARVPIICQKQSQAQ 560

Query: 181 IG 183
            G
Sbjct: 595 FG 560

HSP 2 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 31/97 (31.96%), Postives = 50/97 (51.55%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEE---YEIKPEKST 60
           M++A++ L KM E G++P   T+ T+I GYG A +P ++ E+L +M E    ++ P   T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190

Query: 61  ILLVAEAWRSIGLTKEANRVIGIMKRMESSDQTETKN 95
             ++ +AW      +EA  V+  M+       T T N
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

HSP 3 Score: 35.8 bits (81), Expect = 6.1e-01
Identity = 21/76 (27.63%), Postives = 40/76 (52.63%), Query Frame = 1


Query: 2   DNAIKILNKMCEYG---VSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTI 61
           + + ++L+ M E G   V PN++TF  ++  + + K+  +A E+++ MEE  ++P+  T 
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226

Query: 62  LLVAEAWRSIGLTKEA 75
             +A  +   G T  A
Sbjct: 227 NTIATCYVQKGETVRA 242

[Close]

BLAST of MELO3C003584 vs. TrEMBL
Match: A0A061GRF2_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037144 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.7e-55
Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD+AIKI ++MCE G+SPNLKTFET++ GY EAKQPWKAEE+LQIM+E+E++PEKSTI L
Sbjct: 388 MDSAIKIFDQMCESGISPNLKTFETLVWGYSEAKQPWKAEEILQIMKEFEVEPEKSTIFL 447

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR+IGLTKEANR++   K  E   + ETK ++  E+ +K Y KQ    S++N+LQI
Sbjct: 448 IAEAWRAIGLTKEANRILWTFKSKE--QKMETKEDIPIESLEKLYHKQTMAASNSNVLQI 507

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           P+ V   QKGS    ++ R++LRD D  L+CSWLATKS+Y    CKFG R+PI+ RKQ Q
Sbjct: 508 PSVVAGDQKGSAVSLRKGRMVLRDADFPLDCSWLATKSMYLPLGCKFGARYPIVCRKQCQ 567

Query: 181 AQIGQH 185
            Q+G +
Sbjct: 568 GQLGMY 571

[Close]

BLAST of MELO3C003584 vs. TrEMBL
Match: A0A061GRF2_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037144 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-02
Identity = 22/79 (27.85%), Postives = 41/79 (51.90%), Query Frame = 1


Query: 3   NAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVA 62
           +A++ + +M E  + PNL  F ++I G+ +       +E+L +MEE+ +KP+  T   + 
Sbjct: 250 DALRFVYRMKELRLHPNLVIFNSLIKGFVDIMDRDGVDEVLTLMEEFRVKPDVITFSTIM 309

Query: 63  EAWRSIGLTKEANRVIGIM 82
            AW S G   +   +   M
Sbjct: 310 NAWSSAGFMGKCREIFDDM 328

HSP 2 Score: 43.1 bits (100), Expect = 4.2e-01
Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M    +I + M + G+ P++  +  +  GY  A++P KAEE+L IM +   +P    +  
Sbjct: 318 MGKCREIFDDMVKAGIQPDIHAYSILAKGYVRAQEPEKAEELLTIMIKTGSRPNVVILTT 377

Query: 61  VAEAWRSIGLTKEANRVIGIM 82
           V   W S G    A ++   M
Sbjct: 378 VISGWCSTGRMDSAIKIFDQM 398

HSP 3 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 24/82 (29.27%), Postives = 44/82 (53.66%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           ++ A++   KM E G+ P   T+ T+I GYG A +P ++ +++ +M ++  +KP   T  
Sbjct: 107 IEKAMETFWKMRENGLKPTTSTYNTLIKGYGIAGKPEESLKLVDLMSQQGNVKPNLRTYN 166

Query: 61  LVAEAWRSIGLTKEANRVIGIM 82
           ++  AW       EA  V+  M
Sbjct: 167 VLVRAWCKKKNMTEAWNVVNKM 188

HSP 4 Score: 214.9 bits (546), Expect = 8.2e-53
Identity = 101/186 (54.30%), Postives = 137/186 (73.66%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD AI++ +KMCE+GVSPNLKTFET++ GY EA+QPW+AEE+LQIM+ + + P+KST LL
Sbjct: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR+ GLTKEA R++  +K  E +++ E + E+  E+ ++ Y K+ +  S+ N+LQI
Sbjct: 499 LAEAWRATGLTKEAKRILSKIKNKERTNEMEAEEEIPVESLERLYHKEATTASYPNLLQI 558

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           PN V   QKGS    K+ R+LLRD DSSLECSW AT S+Y S  CK G R PII +KQP 
Sbjct: 559 PNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPL 618

Query: 181 AQIGQH 185
            Q+G +
Sbjct: 619 GQVGMY 624

[Close]

BLAST of MELO3C003584 vs. TrEMBL
Match: V4UI18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007728mg PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-02
Identity = 27/123 (21.95%), Postives = 51/123 (41.46%), Query Frame = 1


Query: 4   AIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVAE 63
           A++    M EYGV PNL  F  +I G+ E       +E+L +M+E+ + P+  T   +  
Sbjct: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361

Query: 64  AWRSIGLTKEANRVIGIMKRMESSDQTETKN--------EMQAENSDKFYKKQLSGTSHT 119
           AW + G   +   +   M +          +        E + E +++     +    H 
Sbjct: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421

HSP 2 Score: 42.0 bits (97), Expect = 9.5e-01
Identity = 26/88 (29.55%), Postives = 45/88 (51.14%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           M+ A+    KM E G++    T+ T+I GYG A +P ++ ++L +M  E  +KP   T  
Sbjct: 158 MEEAMDTFWKMKESGLTATTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRMESS 88
           ++  AW +    K       +M +M +S
Sbjct: 218 VLVRAWCN---EKNITEAWNVMHKMAAS 242

HSP 3 Score: 208.4 bits (529), Expect = 7.6e-51
Identity = 99/186 (53.23%), Postives = 136/186 (73.12%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD AI++ +KMCE+GVSPNLKTFET++ GY EA+QPW+AEE+LQIM+ + + P+KST LL
Sbjct: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEA R+ GLTKEA R++  +K  E +++ E + ++  E+ ++ Y K+ +  S+ N+LQI
Sbjct: 499 LAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQI 558

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           PN V   QKGS    K+ R+LLRD DSSLECSW AT S+Y S  CK G R PII +KQP 
Sbjct: 559 PNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPL 618

Query: 181 AQIGQH 185
            Q+G +
Sbjct: 619 GQVGMY 624

[Close]

BLAST of MELO3C003584 vs. TrEMBL
Match: A0A067GJD1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0066401mg PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-02
Identity = 27/123 (21.95%), Postives = 51/123 (41.46%), Query Frame = 1


Query: 4   AIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVAE 63
           A++    M EYGV PNL  F  +I G+ E       +E+L +M+E+ + P+  T   +  
Sbjct: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361

Query: 64  AWRSIGLTKEANRVIGIMKRMESSDQTETKN--------EMQAENSDKFYKKQLSGTSHT 119
           AW + G   +   +   M +          +        E + E +++     +    H 
Sbjct: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421

HSP 2 Score: 45.1 bits (105), Expect = 1.1e-01
Identity = 27/88 (30.68%), Postives = 46/88 (52.27%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           M+ A+    KM E G++P   T+ T+I GYG A +P ++ ++L +M  E  +KP   T  
Sbjct: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRMESS 88
           ++  AW +    K       +M +M +S
Sbjct: 218 VLVRAWCN---EKNITEAWNVMHKMAAS 242

HSP 3 Score: 208.4 bits (529), Expect = 7.6e-51
Identity = 98/187 (52.41%), Postives = 142/187 (75.94%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M+ AI++ + MCEYG+SPNLKTFET++ G+ EAKQPWKAEE+LQIM E++++PE+ST+LL
Sbjct: 388 MEYAIRVFDMMCEYGISPNLKTFETLMWGFSEAKQPWKAEEILQIMREFKVEPERSTVLL 447

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTE-TKNEMQAENSDKFYKKQLSGTSHTNILQ 120
           VAEAWR+IGLTKEANR++G +KR E + + +  + +M  E+ +K Y+KQ +  S++N+L 
Sbjct: 448 VAEAWRAIGLTKEANRILGTIKRKEMTHRKDRAEEDMPVESLEKLYQKQSTNVSYSNLLH 507

Query: 121 IPNAV--GQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQP 180
           +P+ V   QKGS+   ++ R++LR+ + S+E SWLA KS+  S+ CKFG R PII  KQ 
Sbjct: 508 VPSTVTNDQKGSSAALRKGRMVLREAEFSMEYSWLAAKSMCFSQTCKFGSRLPIICHKQS 567

Query: 181 QAQIGQH 185
           Q Q G +
Sbjct: 568 QGQHGMY 574

[Close]

BLAST of MELO3C003584 vs. TrEMBL
Match: A0A067KR04_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07785 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-03
Identity = 23/78 (29.49%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 4   AIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVAE 63
           A++ + +M E+GV PNL    ++I G+ E       +E+L++MEE+ +KP+  T   +  
Sbjct: 251 ALRFVYRMKEFGVYPNLVVLNSLIKGFIETMDRDGVDEVLKLMEEFNVKPDVITFSTIMN 310

Query: 64  AWRSIGLTKEANRVIGIM 82
           AW + G   +   +   M
Sbjct: 311 AWSTAGFMDKCREIFDDM 328

HSP 2 Score: 45.4 bits (106), Expect = 8.6e-02
Identity = 29/104 (27.88%), Postives = 49/104 (47.12%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           M+ A+    KM E G+ P   T+ T+I GYG + +P ++ ++L +M  E ++KP   T  
Sbjct: 107 MEEAMDTFWKMKENGMKPTTSTYNTLIKGYGISGKPEESAKLLDLMSREGDVKPNLRTYN 166

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDK 104
           ++  AW +     EA  V+  M          T N +    + K
Sbjct: 167 VLVRAWCNKKNISEAWNVVHKMVASRMQPDVVTYNTIATAYTQK 210

HSP 3 Score: 208.4 bits (529), Expect = 7.6e-51
Identity = 103/184 (55.98%), Postives = 135/184 (73.37%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD AIKI  +MCEYGVSPNLKTFET+ICGY EAKQPWKAEE+LQ+M+E+E++PEKSTI L
Sbjct: 388 MDQAIKIFYQMCEYGVSPNLKTFETLICGYSEAKQPWKAEELLQVMKEFEVRPEKSTIFL 447

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR+ GL+KEANR++G +   E   + ET  E+  E+ +K Y +Q +  SH+++LQI
Sbjct: 448 IAEAWRASGLSKEANRILGSVHSKEM--KIETTKEIPTESLEKLYHRQTTMPSHSSLLQI 507

Query: 121 PNAV--GQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           PN V   QK S    ++ R++LRD D  L+CSWL TKS +    CKF  R PI+ +KQ Q
Sbjct: 508 PNMVTDDQKWSALSLRKGRMVLRDADPPLDCSWLVTKSKHIPLGCKFRARCPIVCQKQCQ 567

Query: 181 AQIG 183
            Q+G
Sbjct: 568 QQLG 569

[Close]

BLAST of MELO3C003584 vs. TAIR10
Match: AT5G25630.2 (AT5G25630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 79/182 (43.41%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD+A+++ NKMC++GVSPN+KTFET++ GY E KQPWKAEE+LQ+M    +KPE ST LL
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 499

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR  GLT E+N+ I  +K            +++    +K Y+KQ SG+S  N+LQI
Sbjct: 500 LAEAWRVAGLTDESNKAINALK----------CKDIEIAKLEKLYQKQSSGSSF-NLLQI 559

Query: 121 PNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQ 180
           P  VG++   T    N                          CK G R PII +KQ QAQ
Sbjct: 560 P--VGKRELPTAKAMN-----------------------LSACKLGARVPIICQKQSQAQ 585

Query: 181 IG 183
            G
Sbjct: 620 FG 585

HSP 2 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 31/97 (31.96%), Postives = 50/97 (51.55%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEE---YEIKPEKST 60
           M++A++ L KM E G++P   T+ T+I GYG A +P ++ E+L +M E    ++ P   T
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190

Query: 61  ILLVAEAWRSIGLTKEANRVIGIMKRMESSDQTETKN 95
             ++ +AW      +EA  V+  M+       T T N
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

HSP 3 Score: 35.8 bits (81), Expect = 3.4e-02
Identity = 21/76 (27.63%), Postives = 40/76 (52.63%), Query Frame = 1


Query: 2   DNAIKILNKMCEYG---VSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTI 61
           + + ++L+ M E G   V PN++TF  ++  + + K+  +A E+++ MEE  ++P+  T 
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226

Query: 62  LLVAEAWRSIGLTKEA 75
             +A  +   G T  A
Sbjct: 227 NTIATCYVQKGETVRA 242

[Close]

BLAST of MELO3C003584 vs. TAIR10
Match: AT5G21222.1 (AT5G21222.1 protein kinase family protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 24/77 (31.17%), Postives = 39/77 (50.65%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M+ A++   +M E GV PNL  F ++I G+          E++ +MEE+ +KP+  T   
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606

Query: 61  VAEAWRSIGLTKEANRV 78
           +  AW S+G  K    +
Sbjct: 607 LMNAWSSVGDMKRCEEI 623

HSP 2 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 23/77 (29.87%), Postives = 37/77 (48.05%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M    +I   M E G+ P++  F  +  GY  A +P KAE++L  M ++ ++P       
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676

Query: 61  VAEAWRSIGLTKEANRV 78
           +   W S G  K+A +V
Sbjct: 677 IISGWCSAGEMKKAMQV 693

HSP 3 Score: 45.4 bits (106), Expect = 4.3e-05
Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYE-IKPEKSTIL 60
           +D A+KI  KM E G  P   TF T+I GYG+  +  ++  +L +M   E ++P   T  
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464

Query: 61  LVAEAWRSIGLTKEANRVI 79
           ++ +AW +    +EA  ++
Sbjct: 465 ILVQAWCNQRKIEEAWNIV 483

HSP 4 Score: 39.7 bits (91), Expect = 2.4e-03
Identity = 20/83 (24.10%), Postives = 42/83 (50.60%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD   ++++ M E+GV P++ TF T++  +       + EE+   M E  I P+     +
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641

Query: 61  VAEAWRSIGLTKEANRVIGIMKR 84
           +A+ +   G  ++A +++  M++
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRK 664

HSP 5 Score: 37.4 bits (85), Expect = 1.2e-02
Identity = 25/85 (29.41%), Postives = 37/85 (43.53%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEM-LQIMEEYEIKPEKSTIL 60
           ++ A  I+ KM  YGV P++ TF T+   Y        AE+M +  M   ++KP   T  
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRM 85
            +   +   G  +EA R    MK +
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKEL 560

[Close]

BLAST of MELO3C003584 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.9e-06
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 1


Query: 2   DNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLV 61
           D A  IL  + E G+SP+L T+ +++  Y    + WKAEE+L+ +E+ ++KP+  +   V
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707

Query: 62  AEAWRSIGLTKEANRVIGIM 82
            + +   GL +EA R++  M
Sbjct: 708 IKGFCRRGLMQEAVRMLSEM 727

HSP 2 Score: 42.4 bits (98), Expect = 3.7e-04
Identity = 20/85 (23.53%), Postives = 42/85 (49.41%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M  A+++L++M E G+ P + T+ T + GY       + E++++ M + + +P + T  +
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776

Query: 61  VAEAWRSIGLTKEANRVIGIMKRME 86
           V + +   G   EA   +  +K  +
Sbjct: 777 VVDGYCRAGKYSEAMDFVSKIKTFD 801

HSP 3 Score: 37.0 bits (84), Expect = 1.5e-02
Identity = 27/96 (28.12%), Postives = 41/96 (42.71%), Query Frame = 1


Query: 2   DNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPW-KAEEMLQIMEEYEIKPEKSTILL 61
           + AI +  +M E G SP L T+  I+  +G+  + W K   +L  M    +K ++ T   
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286

Query: 62  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEM 97
           V  A    GL +EA      +K       T T N +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322

[Close]

BLAST of MELO3C003584 vs. NCBI nr
Match: gi|659132532|ref|XP_008466248.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 1.8e-98
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL
Sbjct: 435 MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 494

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI
Sbjct: 495 VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 554

Query: 121 PNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQ 180
           PNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQ
Sbjct: 555 PNAVGQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQAQ 614

Query: 181 IGQH 185
           IG +
Sbjct: 615 IGMY 618

[Close]

BLAST of MELO3C003584 vs. NCBI nr
Match: gi|659132532|ref|XP_008466248.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g25630 [Cucumis melo])

HSP 1 Score: 45.1 bits (105), Expect = 1.6e-01
Identity = 21/84 (25.00%), Postives = 44/84 (52.38%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           +  A  ++  +   G+ P+  T+ T+   Y +  +  +AEE++Q+M++  ++P + T  +
Sbjct: 229 ISEAWNVVQSIGSLGIKPDAVTYNTLATAYAQNGETERAEEIIQVMQDNNVQPNQQTCSI 288

Query: 61  VAEAWRSIGLTKEANRVIGIMKRM 85
           VA  +      KEA R +  MK +
Sbjct: 289 VAFGYCKEXRLKEAMRFVYKMKNL 312

HSP 2 Score: 44.7 bits (104), Expect = 2.1e-01
Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           +  A++ + KM   GV PNL  F ++I G+ E        ++L +M+E+ ++P+  T   
Sbjct: 299 LKEAMRFVYKMKNLGVQPNLVPFNSLIKGFMELMDRDGVNKVLMLMKEFGVEPDVITYST 358

Query: 61  VAEAWRSIGLTKEANRVIGIM 82
           V  AW   G   +   V   M
Sbjct: 359 VMNAWSKAGFMAKCREVFDEM 379

HSP 3 Score: 41.2 bits (95), Expect = 2.3e+00
Identity = 25/79 (31.65%), Postives = 39/79 (49.37%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           ++ A+    KM   G+ P   TF T+I GYG A +P +  ++L +M  E  +KP   T  
Sbjct: 158 VEEAMLTFRKMKASGLRPITSTFNTLIKGYGIAGKPEETVQLLDLMYREENLKPNLRTCN 217

Query: 61  LVAEAWRSIGLTKEANRVI 79
           ++  AW       EA  V+
Sbjct: 218 VLVRAWCKKKKISEAWNVV 236

HSP 4 Score: 221.9 bits (564), Expect = 9.6e-55
Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD+AIKI ++MCE G+SPNLKTFET++ GY EAKQPWKAEE+LQIM+E+E++PEKSTI L
Sbjct: 388 MDSAIKIFDQMCESGISPNLKTFETLVWGYSEAKQPWKAEEILQIMKEFEVEPEKSTIFL 447

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR+IGLTKEANR++   K  E   + ETK ++  E+ +K Y KQ    S++N+LQI
Sbjct: 448 IAEAWRAIGLTKEANRILWTFKSKE--QKMETKEDIPIESLEKLYHKQTMAASNSNVLQI 507

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           P+ V   QKGS    ++ R++LRD D  L+CSWLATKS+Y    CKFG R+PI+ RKQ Q
Sbjct: 508 PSVVAGDQKGSAVSLRKGRMVLRDADFPLDCSWLATKSMYLPLGCKFGARYPIVCRKQCQ 567

Query: 181 AQIGQH 185
            Q+G +
Sbjct: 568 GQLGMY 571

[Close]

BLAST of MELO3C003584 vs. NCBI nr
Match: gi|590573185|ref|XP_007012050.1| (Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 46.6 bits (109), Expect = 5.5e-02
Identity = 22/79 (27.85%), Postives = 41/79 (51.90%), Query Frame = 1


Query: 3   NAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVA 62
           +A++ + +M E  + PNL  F ++I G+ +       +E+L +MEE+ +KP+  T   + 
Sbjct: 250 DALRFVYRMKELRLHPNLVIFNSLIKGFVDIMDRDGVDEVLTLMEEFRVKPDVITFSTIM 309

Query: 63  EAWRSIGLTKEANRVIGIM 82
            AW S G   +   +   M
Sbjct: 310 NAWSSAGFMGKCREIFDDM 328

HSP 2 Score: 43.1 bits (100), Expect = 6.1e-01
Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           M    +I + M + G+ P++  +  +  GY  A++P KAEE+L IM +   +P    +  
Sbjct: 318 MGKCREIFDDMVKAGIQPDIHAYSILAKGYVRAQEPEKAEELLTIMIKTGSRPNVVILTT 377

Query: 61  VAEAWRSIGLTKEANRVIGIM 82
           V   W S G    A ++   M
Sbjct: 378 VISGWCSTGRMDSAIKIFDQM 398

HSP 3 Score: 41.6 bits (96), Expect = 1.8e+00
Identity = 24/82 (29.27%), Postives = 44/82 (53.66%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           ++ A++   KM E G+ P   T+ T+I GYG A +P ++ +++ +M ++  +KP   T  
Sbjct: 107 IEKAMETFWKMRENGLKPTTSTYNTLIKGYGIAGKPEESLKLVDLMSQQGNVKPNLRTYN 166

Query: 61  LVAEAWRSIGLTKEANRVIGIM 82
           ++  AW       EA  V+  M
Sbjct: 167 VLVRAWCKKKNMTEAWNVVNKM 188

HSP 4 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 101/186 (54.30%), Postives = 137/186 (73.66%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD AI++ +KMCE+GVSPNLKTFET++ GY EA+QPW+AEE+LQIM+ + + P+KST LL
Sbjct: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR+ GLTKEA R++  +K  E +++ E + E+  E+ ++ Y K+ +  S+ N+LQI
Sbjct: 499 LAEAWRATGLTKEAKRILSKIKNKERTNEMEAEEEIPVESLERLYHKEATTASYPNLLQI 558

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           PN V   QKGS    K+ R+LLRD DSSLECSW AT S+Y S  CK G R PII +KQP 
Sbjct: 559 PNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPL 618

Query: 181 AQIGQH 185
            Q+G +
Sbjct: 619 GQVGMY 624

[Close]

BLAST of MELO3C003584 vs. NCBI nr
Match: gi|567917236|ref|XP_006450624.1| (hypothetical protein CICLE_v10007728mg [Citrus clementina])

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-02
Identity = 27/123 (21.95%), Postives = 51/123 (41.46%), Query Frame = 1


Query: 4   AIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLVAE 63
           A++    M EYGV PNL  F  +I G+ E       +E+L +M+E+ + P+  T   +  
Sbjct: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361

Query: 64  AWRSIGLTKEANRVIGIMKRMESSDQTETKN--------EMQAENSDKFYKKQLSGTSHT 119
           AW + G   +   +   M +          +        E + E +++     +    H 
Sbjct: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421

HSP 2 Score: 42.0 bits (97), Expect = 1.4e+00
Identity = 26/88 (29.55%), Postives = 45/88 (51.14%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           M+ A+    KM E G++    T+ T+I GYG A +P ++ ++L +M  E  +KP   T  
Sbjct: 158 MEEAMDTFWKMKESGLTATTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRMESS 88
           ++  AW +    K       +M +M +S
Sbjct: 218 VLVRAWCN---EKNITEAWNVMHKMAAS 242

HSP 3 Score: 214.5 bits (545), Expect = 1.5e-52
Identity = 107/187 (57.22%), Postives = 137/187 (73.26%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD A+++ +KMC+ G+SPNLKTFET+I G+ EA+QPWKAEE+LQIM E+E++PEKST+LL
Sbjct: 438 MDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLL 497

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTET-KNEMQAENSDKFYKKQLSGTSHTNILQ 120
           VAEAWR+ G+TKEANR +G M R E ++Q E  + E+   N +K Y+KQ  G  H+NILQ
Sbjct: 498 VAEAWRASGMTKEANRFLGTMNRKEMTNQKEALEKEIPVGNLEKLYQKQTEGVLHSNILQ 557

Query: 121 IPNAV--GQKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQP 180
           IP+ V    KGS    ++ R+LLRD D  +ECSWLAT S   S  CKFG R PII RKQ 
Sbjct: 558 IPSTVTSDMKGSPASLRKGRMLLRDADFPVECSWLATGSKSLSHSCKFGLRLPIICRKQS 617

Query: 181 QAQIGQH 185
           QAQ G +
Sbjct: 618 QAQHGMY 624

[Close]

BLAST of MELO3C003584 vs. NCBI nr
Match: gi|743841933|ref|XP_011026579.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g25630 [Populus euphratica])

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-02
Identity = 35/123 (28.46%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIM-EEYEIKPEKSTIL 60
           M++A++   KM E G+ P   T+ T+I GYG A +P ++ ++L++M +E  +KP   T  
Sbjct: 157 MESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYN 216

Query: 61  LVAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQ 120
           ++  AW +     EA  V+  M          T N +    + K    Q  G     IL+
Sbjct: 217 VLVRAWCNKKRIAEAWNVVNKMIASGIQPDVVTYNTIATAYAQKGALDQAEGA----ILE 275

Query: 121 IPN 123
           + N
Sbjct: 277 MQN 275

HSP 2 Score: 35.4 bits (80), Expect = 1.3e+02
Identity = 19/64 (29.69%), Postives = 34/64 (53.12%), Query Frame = 1


Query: 2   DNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILLV 61
           D   ++LN M E+GV P++ TF TI+  +  A    K  E+   M +  I+P+     ++
Sbjct: 334 DGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSIL 393

Query: 62  AEAW 66
           A+ +
Sbjct: 394 AKGY 397

HSP 3 Score: 212.6 bits (540), Expect = 5.8e-52
Identity = 101/186 (54.30%), Postives = 135/186 (72.58%), Query Frame = 1


Query: 1   MDNAIKILNKMCEYGVSPNLKTFETIICGYGEAKQPWKAEEMLQIMEEYEIKPEKSTILL 60
           MD AI++ +KMCE+GVSPNLKTFET++ GY EAKQPW+AEE+LQIM+ + + P+KST LL
Sbjct: 333 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYNEAKQPWRAEEILQIMKAFGVHPQKSTFLL 392

Query: 61  VAEAWRSIGLTKEANRVIGIMKRMESSDQTETKNEMQAENSDKFYKKQLSGTSHTNILQI 120
           +AEAWR  GLTKEA R++  +K  E +++ E + E+  E+ +  Y K+ +  S+ N+LQI
Sbjct: 393 LAEAWRPTGLTKEAKRILSKIKNKERTNEMEAEEEIPVESLETLYHKEATSASYPNLLQI 452

Query: 121 PNAVG--QKGSTTGNKRNRVLLRDVDSSLECSWLATKSIYQSRICKFGERFPIISRKQPQ 180
           PN V   +KGS    K+ R+LLRD DSSL+CSW AT S+Y S  CK G R PII +KQP 
Sbjct: 453 PNVVSSDKKGSAAALKKGRMLLRDTDSSLDCSWFATTSMYLSHSCKSGARLPIICQKQPL 512

Query: 181 AQIGQH 185
            QIG +
Sbjct: 513 GQIGMY 518

The following BLAST results are available for this feature:

BLAST of MELO3C003584 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP397_ARATH	2.5e-31	43.41	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN...	[more]

BLAST of MELO3C003584 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GRF2_THECC	6.7e-55	57.53	Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G...	[more]
A0A061GRF2_THECC	3.8e-02	27.85	Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G...	[more]
V4UI18_9ROSI	1.0e-02	21.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007728mg PE=4 SV=1	[more]
A0A067GJD1_CITSI	1.0e-02	21.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0066401mg PE=4 SV=1	[more]
A0A067KR04_JATCU	2.0e-03	29.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07785 PE=4 SV=1	[more]

BLAST of MELO3C003584 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25630.2	1.4e-32	43.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G21222.1	1.8e-06	31.17	protein kinase family protein	[more]
AT2G18940.1	3.9e-06	33.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C003584 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132532\|ref\|XP_008466248.1\|	1.8e-98	98.91	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]
gi\|659132532\|ref\|XP_008466248.1\|	1.6e-01	25.00	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g...	[more]
gi\|590573185\|ref\|XP_007012050.1\|	5.5e-02	27.85	Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao]	[more]
gi\|567917236\|ref\|XP_006450624.1\|	1.5e-02	21.95	hypothetical protein CICLE_v10007728mg [Citrus clementina]	[more]
gi\|743841933\|ref\|XP_011026579.1\|	1.5e-02	28.46	PREDICTED: pentatricopeptide repeat-containing protein At5g25630 [Populus euphra...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58022	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003584T1	MELO3C003584T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU58022	MU58022	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 22..49 score: 0
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 22..53 score: 0.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 19..53 score: 9.449coord: 1..18 score: 6
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..142 score: 2.4
None	No IPR available	PANTHER	PTHR24015:SF815	SUBFAMILY NOT NAMED	coord: 1..142 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C003584	Cla023001	Watermelon (97103) v1	mewmB387
MELO3C003584	ClCG11G014000	Watermelon (Charleston Gray)	mewcgB322
MELO3C003584	Cla97C11G219980	Watermelon (97103) v2	mewmbB323
MELO3C003584	Bhi09G002050	Wax gourd	mewgoB435
MELO3C003584	Lsi04G022220	Bottle gourd (USVL1VR-Ls)	lsimeB310

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C003584	Cucurbita pepo (Zucchini)	cpemeB093
MELO3C003584	Cucurbita pepo (Zucchini)	cpemeB515
MELO3C003584	Cucurbita pepo (Zucchini)	cpemeB728
MELO3C003584	Cucurbita pepo (Zucchini)	cpemeB769
MELO3C003584	Bottle gourd (USVL1VR-Ls)	lsimeB479
MELO3C003584	Cucumber (Gy14) v2	cgybmeB106
MELO3C003584	Cucumber (Gy14) v2	cgybmeB185
MELO3C003584	Silver-seed gourd	carmeB0059
MELO3C003584	Silver-seed gourd	carmeB0631
MELO3C003584	Silver-seed gourd	carmeB0958
MELO3C003584	Cucumber (Chinese Long) v3	cucmeB127
MELO3C003584	Cucumber (Chinese Long) v3	cucmeB219
MELO3C003584	Watermelon (97103) v2	mewmbB353
MELO3C003584	Wax gourd	mewgoB411
MELO3C003584	Melon (DHL92) v3.5.1	memeB122
MELO3C003584	Cucumber (Gy14) v1	cgymeB278
MELO3C003584	Cucumber (Gy14) v1	cgymeB517
MELO3C003584	Cucurbita maxima (Rimu)	cmameB034
MELO3C003584	Cucurbita maxima (Rimu)	cmameB169
MELO3C003584	Cucurbita maxima (Rimu)	cmameB425
MELO3C003584	Cucurbita maxima (Rimu)	cmameB729
MELO3C003584	Cucurbita moschata (Rifu)	cmomeB023
MELO3C003584	Cucurbita moschata (Rifu)	cmomeB158
MELO3C003584	Cucurbita moschata (Rifu)	cmomeB415
MELO3C003584	Cucurbita moschata (Rifu)	cmomeB720
MELO3C003584	Wild cucumber (PI 183967)	cpimeB124
MELO3C003584	Wild cucumber (PI 183967)	cpimeB215
MELO3C003584	Cucumber (Chinese Long) v2	cumeB122
MELO3C003584	Cucumber (Chinese Long) v2	cumeB222
MELO3C003584	Watermelon (Charleston Gray)	mewcgB351
MELO3C003584	Watermelon (97103) v1	mewmB350