MELO3C003364 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003364
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glycine-rich protein
Location	chr4 : 622667 .. 626689 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCGATCCAAATTCTTCTTTCAAAGACGCCGCAGGGATGGAACCGAAATTTTTGGTCTCCATCAAACGGATGATGATGGTTGTAAGACCATTTCGGTCGCTTTGACTTTCGATGAGGTATATACTTTAATTTTTCTTCCTTCTTTTTATTTGATTTATTTTTTTTTTTGGGTTTGTTGAATTGTTTGTAAGTTTCAGTGTTTGTGAGCTTCAAGTGATTTATCTTCAGTTATCAAGCTAAGAATTTATTTCTGTTTTTAACATAGTTTTGGCAATCTTATCTTGCATTACAGATTTTTTCATGTTCCATGTTAGAAATCGCTTCCATTTAGAGTAACGAGCTGAATTATAATGTGGTGGTGAAGCAATTGCTGGTAGCAAGAGCTTTCTGTTAGACACCGGCGTTGTCATACACTGGTGTCATTTCAAATTTCAATTTTCCCACTAGAAAATTGTTGGTAGTAATGGTAATGAGCTGAATTAGTGTCACAATCACGCTTTCTTAAGACTCCTAAAGCATAATCTTGTTTTGGCCCTCGAACAATTCAGTCAATTCTAATTCAGGTAATAGGAGGCGAAATAAGCGTATTTCGTAAACTCCACTCCTGTTTTGGAGAAAACAGTTTCAGAAAATGGGGTTAGAGAAAAAGGTTTCATAAACGTTTGAAAACATTTAGATATTGTCTTTCATTTCTCGTGTTCATTCAGACTGGTTACCTAAATTAGAATCCAAATTCGAGGGAAGACATGTAATATAAGTTTTCATTCAAGTGAAAATCTGTTAATGGATAGGATTCAGAGTGTATATCGGTAATACGTATACCTATCACCGATCAACAAGAAAGTCTGCAGTCATATTATTTATCTCATTTAAAATTGGTTATGGTTGTCTATAAAATCAAATTATTTCTCTCATTTGCATTCTACTGGTAAGCCGTACTCTTTGGACTAAATGCCATAGCTATTTTGTTGATTACAGATTATATAGATATTAATGTTTCTGGTGCACCAGAAAAGAGCAAATGCCACAAAGACTATTCTACTTCTGAGGTTAAGTTTGCTCGATAAATTCATCTGGAGTGCTATGTGCGAGTAGACTCTGCAAAATAACTTTCAGTGATGTGTTCTTCCCTGCCGCACTGGCACATAAGACAGTATATAGTTTGGGGATGTCTATACATGTCTGTCATCACCCTCAATTCACTTCAGTATGAAAGTGGAAATGTTTTTCTGAACGATTTGCGGCATGAATTCCGGCCAGTGACAGGCAATGGCTCTCAGAACATTAGTCCAATACTTTTTTCTTCTTCAAATCATTTTGTATCATGCGAGGACCTGGGAGGTGTTGGGTCATTTAACACAACCTGCCTGTTAAACACAAACTTGTCTTTATATTCTGATTTTTACATATCTGGAACGGGGAATCTGGAGATACTTCCACACGTTGTGATTTGCTGCCCCATAGAAGGTTGTACAATTACTCTTAATATGTCTGGCAATATCAAAGTCAGTCACCACGCCGGTGTTGTTGCTGGTTCTGTGGTTTTTTTTGCTGCTAATTTAACAATGGAATACAATTCGTACATAAATACTACTTCCCTTGGTGGAGCACCTCCTTCTCAAACGAGTGGCACACCATTTGGTTATGATGGATCTGGTGGAGGTCATGGTGGCCGAGGGGCATCCTGTTTTAAAAGTAATCAGACAAGCAATTGGGGTGGTGATGTGTATGCTTGGTCTACATTGTCTGAACCATGGAGCTATGGGAGCAAGGGTGGTGGCATATCAGATGAAAAGCCATATGGAGGGCTTGGTGGAGGACGTGTGAAACTTATAATAGTAGGTGTATTATATCTAAATGGTTCTATCCTAGCAGAAGGTGGAGACGGAGGATCAAGAGGTGGAGGTGGATCTGGTGGAAGTATCTTTGTGCATGCTGTAAAGTTGTGAGTATAATTCATGCTTGTGGATTGGTTTAAACTTTTCAAGTGCTTTCTCTTGAGGTTATGATTATGATGCATACCTTTTCGCTAATCTAGTTTGAAACCCATATAAGTTTAACTACTGAATTTGTTTGTATGTTATGTTTAAAGTTTTTTGTGTATTAGTGTTGTTTATCTAATTTGAAACCCGCACAAGCTTTTTGCATGTTTAATGTTAACTTAACTGTGTGAAATCTTCAACAATAACATCTAATACACTTTAGACAACATCACTGATGATAGTGATGGCAGTGCCGTTTTAAGCACGTGAAGTTACCATCAATACATGAGTACTTTTTTTTAATGAATACCCAAAGTTCGAGGGGAAAAAAAATGAAAGAATGTACAAGCATGCAAAAAATGAGAGCACACAAAAAGGGGAGGAACCTACAAAGATGACCTCGATATAACAAAATATACTTAATATGGAATTGCCTCTGACATACATAAAATGAATAATTATAAATTTAGGGAACAGATTCCAAACGGCTAGTTTCTTCTTTTACTTCCTAGCATATAGCTTGCTTGGTGATGCTGACATTTAGGGCGAGAGGAATGAGCGGGTCTTTAGGGGTAGGGAGAGGGAGCATAGTGATATTTGGTCTTTGCTAGATTTCATGTTTTCCTTTGGATTTCGATTTTGAAGCTTTTTTCTAATTATTCTATATGTAACATTTTACTTGGTCCCCTTTCTGCTAGCTGGGGTGTTTTAGCGGGCTTGTTTTTTTTGTATGCCAATGTATTCTTTCATTTTTTCTCAATGAAAGCAGGTTGTTTTATAAAAAAATAGCTTGCTCAGTGATGTCTATTGTTTGTTCTTGGGAAGTTATGTATCAGCTCCTTCACTGTTAGGCCTATAGCCAAATTTTTCTTTAGTTCCATTTGAAGGACTGAAATTCTTTGTCTGCTCCCTACTAGACCGTGAGAAAAAAATGGAAGAAAAGTTTGAAAGTACCTTGATTATTTAATGGCGCTCTCATTGTAGCATGCAGAAATCTCACAAATGAATGATGCTTCTGATATCTTCAATATTGGCTCAGAGATTGTGTACTGTCGGTTGTTTCGTCTGTTTCTAATATTTGGCTCTCTTTCTATATACCTAGAAGGGGAAGTGGAACTATATCTGCTGCAGGCGGAAAGGGATGGGGTGGAGGTGGTGGGGGAAGAATTTCTCTGGATTGCTATAGCATTCAAGAAGATATTAAGGTTACTGTACATGGTATGTGCTTTGAATCGATGAAATATTCAATGTCGTCATATGTTAGATGATATAGCATTTAATTTGCTTTCATCCACTAATTTAAGCTTTTTGGTTAATTGGTAATTTAAGATGTTATCAGAGCAGATGGTCTAGGAGGCTATGTATTCAAACCCCTGCAGTTCTATTTCCTCCCTAGTTAAAATTGCCTTCCACTTGTTGAGTCTTTTACATATTTGAAGCCTCAAGTAAGGGGAGAGTTAGATGATATAAGAATAAATTTGTCTTCCCATCAACTTAAGTTTTTGGGTCAATTGGCGATTTAAGTTTATATAATAATTATTGTTTTATGTGATAATAATGATCGGGAAGGATTCTACAATACTGGTTACTAGGCTATCTGGCTTTGTGTAGTATGCCATTGCCTGTCTTGGAAACTAGAAATATAATTTTTTTTTTTTTTTTTGACTTTTTGGAGTGCTTCTAATATTGAATACAACATTGGCAACTCTATGTTTGCACCATCCTTGTTTCAGGTGGTATAAGTATTGGGTGTTCTGGTAATGCTGGGGCAGCTGGCACTTACTTCAATGCTGATTTGCTTAGTTTAAGAGTTGGAAATGACAATCTCACGACAGAAACTGAAACCCCATTGCTAGACTTTTCTACTAGTCCCCTATGGTCAAACGTGTTTGTGGAGAATAATGCAAAAGCATTGGTCCCATTGCTGTGGACAAGAGTCCAGGTATTGGGTGACGTTTTCTTCCTTGTGCTTCCGTTGTTGTGTAGAGGTGGAAAATGCCTTGCTCCCTTAAACTTCAAATATTTGTTGATTAATTGA

mRNA sequence

AAGATCGATCCAAATTCTTCTTTCAAAGACGCCGCAGGGATGGAACCGAAATTTTTGGTCTCCATCAAACGGATGATGATGGTTGTAAGACCATTTCGGTCGCTTTGACTTTCGATGAGATTATATAGATATTAATGTTTCTGGTGCACCAGAAAAGAGCAAATGCCACAAAGACTATTCTACTTCTGAGGTTAAGTTTGCTCGATAAATTCATCTGGAGTGCTATGTGCGAGTAGACTCTGCAAAATAACTTTCAGTGATGTGTTCTTCCCTGCCGCACTGGCACATAAGACAGTATATAGTTTGGGGATGTCTATACATGTCTGTCATCACCCTCAATTCACTTCAGTATGAAAGTGGAAATGTTTTTCTGAACGATTTGCGGCATGAATTCCGGCCAGTGACAGGCAATGGCTCTCAGAACATTAGTCCAATACTTTTTTCTTCTTCAAATCATTTTGTATCATGCGAGGACCTGGGAGGTGTTGGGTCATTTAACACAACCTGCCTGTTAAACACAAACTTGTCTTTATATTCTGATTTTTACATATCTGGAACGGGGAATCTGGAGATACTTCCACACGTTGTGATTTGCTGCCCCATAGAAGGTTGTACAATTACTCTTAATATGTCTGGCAATATCAAAGTCAGTCACCACGCCGGTGTTGTTGCTGGTTCTGTGGTTTTTTTTGCTGCTAATTTAACAATGGAATACAATTCGTACATAAATACTACTTCCCTTGGTGGAGCACCTCCTTCTCAAACGAGTGGCACACCATTTGGTTATGATGGATCTGGTGGAGGTCATGGTGGCCGAGGGGCATCCTGTTTTAAAAGTAATCAGACAAGCAATTGGGGTGGTGATGTGTATGCTTGGTCTACATTGTCTGAACCATGGAGCTATGGGAGCAAGGGTGGTGGCATATCAGATGAAAAGCCATATGGAGGGCTTGGTGGAGGACGTGTGAAACTTATAATAGTAGGTGTATTATATCTAAATGGTTCTATCCTAGCAGAAGGTGGAGACGGAGGATCAAGAGGTGGAGGTGGATCTGGTGGAAGTATCTTTGTGCATGCTGTAAAGTTAAGGGGAAGTGGAACTATATCTGCTGCAGGCGGAAAGGGATGGGGTGGAGGTGGTGGGGGAAGAATTTCTCTGGATTGCTATAGCATTCAAGAAGATATTAAGGTTACTGTACATGGTGGTATAAGTATTGGGTGTTCTGGTAATGCTGGGGCAGCTGGCACTTACTTCAATGCTGATTTGCTTAGTTTAAGAGTTGGAAATGACAATCTCACGACAGAAACTGAAACCCCATTGCTAGACTTTTCTACTAGTCCCCTATGGTCAAACGTGTTTGTGGAGAATAATGCAAAAGCATTGGTCCCATTGCTGTGGACAAGAGTCCAGGTATTGGGTGACGTTTTCTTCCTTGTGCTTCCGTTGTTGTGTAGAGGTGGAAAATGCCTTGCTCCCTTAAACTTCAAATATTTGTTGATTAATTGA

Coding sequence (CDS)

ATGTGTTCTTCCCTGCCGCACTGGCACATAAGACAGTATATAGTTTGGGGATGTCTATACATGTCTGTCATCACCCTCAATTCACTTCAGTATGAAAGTGGAAATGTTTTTCTGAACGATTTGCGGCATGAATTCCGGCCAGTGACAGGCAATGGCTCTCAGAACATTAGTCCAATACTTTTTTCTTCTTCAAATCATTTTGTATCATGCGAGGACCTGGGAGGTGTTGGGTCATTTAACACAACCTGCCTGTTAAACACAAACTTGTCTTTATATTCTGATTTTTACATATCTGGAACGGGGAATCTGGAGATACTTCCACACGTTGTGATTTGCTGCCCCATAGAAGGTTGTACAATTACTCTTAATATGTCTGGCAATATCAAAGTCAGTCACCACGCCGGTGTTGTTGCTGGTTCTGTGGTTTTTTTTGCTGCTAATTTAACAATGGAATACAATTCGTACATAAATACTACTTCCCTTGGTGGAGCACCTCCTTCTCAAACGAGTGGCACACCATTTGGTTATGATGGATCTGGTGGAGGTCATGGTGGCCGAGGGGCATCCTGTTTTAAAAGTAATCAGACAAGCAATTGGGGTGGTGATGTGTATGCTTGGTCTACATTGTCTGAACCATGGAGCTATGGGAGCAAGGGTGGTGGCATATCAGATGAAAAGCCATATGGAGGGCTTGGTGGAGGACGTGTGAAACTTATAATAGTAGGTGTATTATATCTAAATGGTTCTATCCTAGCAGAAGGTGGAGACGGAGGATCAAGAGGTGGAGGTGGATCTGGTGGAAGTATCTTTGTGCATGCTGTAAAGTTAAGGGGAAGTGGAACTATATCTGCTGCAGGCGGAAAGGGATGGGGTGGAGGTGGTGGGGGAAGAATTTCTCTGGATTGCTATAGCATTCAAGAAGATATTAAGGTTACTGTACATGGTGGTATAAGTATTGGGTGTTCTGGTAATGCTGGGGCAGCTGGCACTTACTTCAATGCTGATTTGCTTAGTTTAAGAGTTGGAAATGACAATCTCACGACAGAAACTGAAACCCCATTGCTAGACTTTTCTACTAGTCCCCTATGGTCAAACGTGTTTGTGGAGAATAATGCAAAAGCATTGGTCCCATTGCTGTGGACAAGAGTCCAGGTATTGGGTGACGTTTTCTTCCTTGTGCTTCCGTTGTTGTGTAGAGGTGGAAAATGCCTTGCTCCCTTAAACTTCAAATATTTGTTGATTAATTGA

Protein sequence

MCSSLPHWHIRQYIVWGCLYMSVITLNSLQYESGNVFLNDLRHEFRPVTGNGSQNISPILFSSSNHFVSCEDLGGVGSFNTTCLLNTNLSLYSDFYISGTGNLEILPHVVICCPIEGCTITLNMSGNIKVSHHAGVVAGSVVFFAANLTMEYNSYINTTSLGGAPPSQTSGTPFGYDGSGGGHGGRGASCFKSNQTSNWGGDVYAWSTLSEPWSYGSKGGGISDEKPYGGLGGGRVKLIIVGVLYLNGSILAEGGDGGSRGGGGSGGSIFVHAVKLRGSGTISAAGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGNDNLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCLAPLNFKYLLIN*

Homology

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BLAST of MELO3C003364 vs. TrEMBL
Match: A0A0A0LKA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G910730 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.7e-63
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVL DVFFL+LPLL RGGKCL
Sbjct: 345 NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLSDVFFLMLPLLYRGGKCL 404

Query: 123 APL 126
           APL
Sbjct: 405 APL 407

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BLAST of MELO3C003364 vs. TrEMBL
Match: M5WFM2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000222mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-49
Identity = 98/124 (79.03%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG+GWGGGGGGR+SLDCYSIQED+KVTVHGG+SIGC GNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGRGWGGGGGGRLSLDCYSIQEDVKVTVHGGLSIGCPGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           N+TTETETPLLDF TSPLWS+VFVENNAK LVPLLWTRVQV G +       L RGG  +
Sbjct: 345 NITTETETPLLDFPTSPLWSHVFVENNAKVLVPLLWTRVQVRGQI------SLYRGGSII 402

Query: 123 APLN 127
             L+
Sbjct: 405 FGLS 402

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BLAST of MELO3C003364 vs. TrEMBL
Match: A0A0D2S2D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G190100 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-49
Identity = 98/124 (79.03%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG GWGGGGGGRISLDCYSIQED+KV+VHGG S+GC GN+GAAGTYFNADLLSLRVGND
Sbjct: 301 AGGMGWGGGGGGRISLDCYSIQEDVKVSVHGGYSLGCPGNSGAAGTYFNADLLSLRVGND 360

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           N+TTETETPLLDFSTSPLWSNVFVENNAK LVPLLWTRVQV G +       L RGG+ +
Sbjct: 361 NVTTETETPLLDFSTSPLWSNVFVENNAKVLVPLLWTRVQVRGQI------SLYRGGEIV 418

Query: 123 APLN 127
             L+
Sbjct: 421 FGLS 418

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BLAST of MELO3C003364 vs. TrEMBL
Match: A0A0B0PPF4_GOSAR (Vacuolar sorting-associated protein 13A OS=Gossypium arboreum GN=F383_12538 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-48
Identity = 97/124 (78.23%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG GWGGGGGGRISLDCYSIQED+KV+VHGG S+GC GN+GAAGTYFNADLLSLRVGND
Sbjct: 301 AGGMGWGGGGGGRISLDCYSIQEDVKVSVHGGYSLGCPGNSGAAGTYFNADLLSLRVGND 360

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           N+TT+TETPLLDFSTSPLWSNVFVENNAK LVPLLWTRVQV G +       L RGG+ +
Sbjct: 361 NVTTDTETPLLDFSTSPLWSNVFVENNAKVLVPLLWTRVQVRGQI------SLYRGGEIV 418

Query: 123 APLN 127
             L+
Sbjct: 421 FGLS 418

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BLAST of MELO3C003364 vs. TrEMBL
Match: D7TTH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00460 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-48
Identity = 95/116 (81.90%), Postives = 102/116 (87.93%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG GWGGGGGGRISLDCYSIQED+K+TVHGG+SIGC GNAGAAGTYF+A LLSLRVGND
Sbjct: 136 AGGSGWGGGGGGRISLDCYSIQEDVKITVHGGLSIGCPGNAGAAGTYFDATLLSLRVGND 195

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRG 119
           N+TTETETPLLDF T+PLWSNVFVENNAK LVPLLWTRVQV G +      LLC G
Sbjct: 196 NITTETETPLLDFPTTPLWSNVFVENNAKVLVPLLWTRVQVRGQI-----KLLCGG 246

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BLAST of MELO3C003364 vs. TAIR10
Match: AT5G47020.1 (AT5G47020.1 unknown protein)

HSP 1 Score: 188.0 bits (476), Expect = 3.9e-48
Identity = 85/105 (80.95%), Postives = 94/105 (89.52%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           +GG+GWGGGGGGRISLDCYSIQED+KV VHGG SIGC  NAGAAGTYFNA+L+SLRVGND
Sbjct: 266 SGGRGWGGGGGGRISLDCYSIQEDVKVFVHGGASIGCPKNAGAAGTYFNAELVSLRVGND 325

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDV 108
           N+TTETETPLLDF T PLWSN++V+NNAK LVPLLWTR+QV G +
Sbjct: 326 NMTTETETPLLDFPTRPLWSNIYVDNNAKVLVPLLWTRMQVGGQI 370

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BLAST of MELO3C003364 vs. TAIR10
Match: AT5G11700.2 (AT5G11700.2 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3))

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = 1


Query: 4   GGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGNDN 63
           GG G+GGGGGGR+S+D +S  +D K+ VHGG SIGC  N+GAAGT ++A   SL V N N
Sbjct: 291 GGSGYGGGGGGRVSVDIFSRHDDPKIFVHGGYSIGCPDNSGAAGTLYDAVPRSLFVSNYN 350

Query: 64  LTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRG 119
            TT+T T LL+F   PLW+NV++++ A+A  PLLW+RVQV G +      LLC G
Sbjct: 351 QTTDTYTLLLEFPFQPLWTNVYIQDKARATCPLLWSRVQVQGQI-----SLLCGG 400

[Close]

BLAST of MELO3C003364 vs. TAIR10
Match: AT4G32920.1 (AT4G32920.1 glycine-rich protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23
Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           +GG G+ GGGGGR+S+D YS   D K+  +GG S GC  NAGAAGT ++    SL + N 
Sbjct: 280 SGGDGYAGGGGGRVSVDIYSRHSDPKIFFNGGRSFGCPENAGAAGTLYDVISESLTIDNH 339

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLG 106
           N TT T+T LL+F    L++N+++ N AK  VPL W+RVQV G
Sbjct: 340 NKTTYTDTLLLEFPNHRLFTNLYIRNMAKVAVPLRWSRVQVQG 382

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BLAST of MELO3C003364 vs. NCBI nr
Match: gi|700205303|gb|KGN60436.1| (hypothetical protein Csa_3G910730 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-63
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVL DVFFL+LPLL RGGKCL
Sbjct: 345 NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLSDVFFLMLPLLYRGGKCL 404

Query: 123 APL 126
           APL
Sbjct: 405 APL 407

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BLAST of MELO3C003364 vs. NCBI nr
Match: gi|449461585|ref|XP_004148522.1| (PREDICTED: uncharacterized protein LOC101208985 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-52
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDV 108
           NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQV G +
Sbjct: 345 NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVRGQI 389

[Close]

BLAST of MELO3C003364 vs. NCBI nr
Match: gi|659131906|ref|XP_008465917.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503496 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-52
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDV 108
           NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQV G +
Sbjct: 345 NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVRGQI 389

[Close]

BLAST of MELO3C003364 vs. NCBI nr
Match: gi|645246768|ref|XP_008229507.1| (PREDICTED: uncharacterized protein LOC103328882 [Prunus mume])

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-49
Identity = 98/124 (79.03%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG+GWGGGGGGR+SLDCYSIQED+KVTVHGG+SIGC GNAGAAGTYFNADLLSLRVGND
Sbjct: 290 AGGRGWGGGGGGRLSLDCYSIQEDVKVTVHGGLSIGCPGNAGAAGTYFNADLLSLRVGND 349

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           N+TTETETPLLDF TSPLWS+VFVENNAK LVPLLWTRVQV G +       L RGG  +
Sbjct: 350 NITTETETPLLDFPTSPLWSHVFVENNAKVLVPLLWTRVQVRGQI------SLYRGGSII 407

Query: 123 APLN 127
             L+
Sbjct: 410 FGLS 407

[Close]

BLAST of MELO3C003364 vs. NCBI nr
Match: gi|595861338|ref|XP_007211315.1| (hypothetical protein PRUPE_ppa000222mg [Prunus persica])

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-49
Identity = 98/124 (79.03%), Postives = 107/124 (86.29%), Query Frame = 1


Query: 3   AGGKGWGGGGGGRISLDCYSIQEDIKVTVHGGISIGCSGNAGAAGTYFNADLLSLRVGND 62
           AGG+GWGGGGGGR+SLDCYSIQED+KVTVHGG+SIGC GNAGAAGTYFNADLLSLRVGND
Sbjct: 285 AGGRGWGGGGGGRLSLDCYSIQEDVKVTVHGGLSIGCPGNAGAAGTYFNADLLSLRVGND 344

Query: 63  NLTTETETPLLDFSTSPLWSNVFVENNAKALVPLLWTRVQVLGDVFFLVLPLLCRGGKCL 122
           N+TTETETPLLDF TSPLWS+VFVENNAK LVPLLWTRVQV G +       L RGG  +
Sbjct: 345 NITTETETPLLDFPTSPLWSHVFVENNAKVLVPLLWTRVQVRGQI------SLYRGGSII 402

Query: 123 APLN 127
             L+
Sbjct: 405 FGLS 402

The following BLAST results are available for this feature:

BLAST of MELO3C003364 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKA9_CUCSA	3.7e-63	97.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G910730 PE=4 SV=1	[more]
M5WFM2_PRUPE	1.8e-49	79.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000222mg PE=4 SV=1	[more]
A0A0D2S2D6_GOSRA	5.1e-49	79.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G190100 PE=4 SV=1	[more]
A0A0B0PPF4_GOSAR	1.1e-48	78.23	Vacuolar sorting-associated protein 13A OS=Gossypium arboreum GN=F383_12538 PE=4...	[more]
D7TTH7_VITVI	2.0e-48	81.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00460 PE=4 SV=...	[more]

BLAST of MELO3C003364 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47020.1	3.9e-48	80.95	unknown protein	[more]
AT5G11700.2	1.4e-29	53.91	BEST Arabidopsis thaliana protein match is: glycine-rich protein (TA...	[more]
AT4G32920.1	1.1e-23	50.49	glycine-rich protein	[more]

BLAST of MELO3C003364 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700205303\|gb\|KGN60436.1\|	5.3e-63	97.56	hypothetical protein Csa_3G910730 [Cucumis sativus]	[more]
gi\|449461585\|ref\|XP_004148522.1\|	1.9e-52	97.14	PREDICTED: uncharacterized protein LOC101208985 [Cucumis sativus]	[more]
gi\|659131906\|ref\|XP_008465917.1\|	1.9e-52	97.14	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503496 [Cucumis me...	[more]
gi\|645246768\|ref\|XP_008229507.1\|	2.5e-49	79.03	PREDICTED: uncharacterized protein LOC103328882 [Prunus mume]	[more]
gi\|595861338\|ref\|XP_007211315.1\|	2.5e-49	79.03	hypothetical protein PRUPE_ppa000222mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU56993	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003364T2	MELO3C003364T2	mRNA
MELO3C003364T1	MELO3C003364T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU56993	MU56993	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31513	FAMILY NOT NAMED	coord: 1..385 score: 1.4E
None	No IPR available	PANTHER	PTHR31513:SF2	SUBFAMILY NOT NAMED	coord: 1..385 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C003364	Csa3G910730	Cucumber (Chinese Long) v2	cumeB222
MELO3C003364	CSPI03G47180	Wild cucumber (PI 183967)	cpimeB215

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C003364	Cucurbita pepo (Zucchini)	cpemeB038
MELO3C003364	Cucurbita pepo (Zucchini)	cpemeB689
MELO3C003364	Bottle gourd (USVL1VR-Ls)	lsimeB351
MELO3C003364	Bottle gourd (USVL1VR-Ls)	lsimeB439
MELO3C003364	Cucumber (Gy14) v2	cgybmeB185
MELO3C003364	Cucumber (Gy14) v2	cgybmeB188
MELO3C003364	Cucumber (Gy14) v2	cgybmeB193
MELO3C003364	Silver-seed gourd	carmeB0568
MELO3C003364	Silver-seed gourd	carmeB0702
MELO3C003364	Silver-seed gourd	carmeB0771
MELO3C003364	Cucumber (Chinese Long) v3	cucmeB219
MELO3C003364	Cucumber (Chinese Long) v3	cucmeB222
MELO3C003364	Cucumber (Chinese Long) v3	cucmeB227
MELO3C003364	Watermelon (97103) v2	mewmbB318
MELO3C003364	Watermelon (97103) v2	mewmbB340
MELO3C003364	Watermelon (97103) v2	mewmbB363
MELO3C003364	Wax gourd	mewgoB378
MELO3C003364	Wax gourd	mewgoB400
MELO3C003364	Wax gourd	mewgoB402
MELO3C003364	Melon (DHL92) v3.5.1	memeB141
MELO3C003364	Melon (DHL92) v3.5.1	memeB139
MELO3C003364	Cucumber (Gy14) v1	cgymeB432
MELO3C003364	Cucumber (Gy14) v1	cgymeB517
MELO3C003364	Cucumber (Gy14) v1	cgymeB531
MELO3C003364	Cucurbita maxima (Rimu)	cmameB289
MELO3C003364	Cucurbita maxima (Rimu)	cmameB473
MELO3C003364	Cucurbita maxima (Rimu)	cmameB567
MELO3C003364	Cucurbita maxima (Rimu)	cmameB754
MELO3C003364	Cucurbita moschata (Rifu)	cmomeB282
MELO3C003364	Cucurbita moschata (Rifu)	cmomeB460
MELO3C003364	Cucurbita moschata (Rifu)	cmomeB463
MELO3C003364	Cucurbita moschata (Rifu)	cmomeB556
MELO3C003364	Cucurbita moschata (Rifu)	cmomeB746
MELO3C003364	Wild cucumber (PI 183967)	cpimeB218
MELO3C003364	Wild cucumber (PI 183967)	cpimeB224
MELO3C003364	Cucumber (Chinese Long) v2	cumeB227
MELO3C003364	Watermelon (Charleston Gray)	mewcgB310
MELO3C003364	Watermelon (Charleston Gray)	mewcgB317
MELO3C003364	Watermelon (97103) v1	mewmB342
MELO3C003364	Watermelon (97103) v1	mewmB347
MELO3C003364	Watermelon (97103) v1	mewmB375