MELO3C003279 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003279
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit A
Locationchr8 : 32187893 .. 32188542 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGCATTTTGCTAATCCTGATACGTTAGTTGTGGTCTATGATTCTTCAAATGAAGATCACATTACTATTGACATCTTTTGCATCATCCTTGAAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGTAAATATTTCTGACCAGCATCATTCTTGCCTGGTTGTTATGGATCTTATTCATCATGCAGGGTTATCTAA

mRNA sequence

ATGAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGGTTATCTAA

Coding sequence (CDS)

ATGAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGGTTATCTAA

Protein sequence

MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHIDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTRVI*
Homology
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BLAST of MELO3C003279 vs. NCBI nr
Match: gi|659069500|ref|XP_008450238.1| (PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60
           MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH
Sbjct: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60

Query: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120
           IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK
Sbjct: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120

Query: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 162
           LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT
Sbjct: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 161

The following BLAST results are available for this feature:
BLAST of MELO3C003279 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069500|ref|XP_008450238.1|1.9e-83100.00PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003279T1MELO3C003279T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003279Cucumber (Gy14) v2cgybmeB281
MELO3C003279Silver-seed gourdcarmeB0480
MELO3C003279Silver-seed gourdcarmeB0521
MELO3C003279Cucumber (Chinese Long) v3cucmeB329
MELO3C003279Watermelon (97103) v2mewmbB543
MELO3C003279Wax gourdmewgoB648
MELO3C003279Cucumber (Gy14) v1cgymeB303
MELO3C003279Cucurbita maxima (Rimu)cmameB616
MELO3C003279Cucurbita maxima (Rimu)cmameB812
MELO3C003279Cucurbita moschata (Rifu)cmomeB611
MELO3C003279Cucurbita moschata (Rifu)cmomeB796
MELO3C003279Wild cucumber (PI 183967)cpimeB325
MELO3C003279Cucumber (Chinese Long) v2cumeB328
MELO3C003279Watermelon (Charleston Gray)mewcgB535
MELO3C003279Cucurbita pepo (Zucchini)cpemeB066
MELO3C003279Cucurbita pepo (Zucchini)cpemeB453
MELO3C003279Bottle gourd (USVL1VR-Ls)lsimeB153