|
|
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGCAAAACTGAAGGACGGAAAAAGTCTAAGGGTGGTGATGGGGAAGGAAGACATAAAAGAGGAGCTGAAAACAAGAAAGAGATTGGGAAGGACAAACAAAACTTGGAAATTGATCCACTTGAAAGAGACAAGAAAAGGAACAAAACCCACAGAGACGAGATGATGGCAAAAATCAATGACTAG mRNA sequence ATGGGCAAAACTGAAGGACGGAAAAAGTCTAAGGGTGGTGATGGGGAAGGAAGACATAAAAGAGGAGCTGAAAACAAGAAAGAGATTGGGAAGGACAAACAAAACTTGGAAATTGATCCACTTGAAAGAGACAAGAAAAGGAACAAAACCCACAGAGACGAGATGATGGCAAAAATCAATGACTAG Coding sequence (CDS) ATGGGCAAAACTGAAGGACGGAAAAAGTCTAAGGGTGGTGATGGGGAAGGAAGACATAAAAGAGGAGCTGAAAACAAGAAAGAGATTGGGAAGGACAAACAAAACTTGGAAATTGATCCACTTGAAAGAGACAAGAAAAGGAACAAAACCCACAGAGACGAGATGATGGCAAAAATCAATGACTAG Protein sequence MGKTEGRKKSKGGDGEGRHKRGAENKKEIGKDKQNLEIDPLERDKKRNKTHRDEMMAKIND*
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006633 |
fatty acid biosynthetic process |
| biological_process |
GO:2001295 |
malonyl-CoA biosynthetic process |
| biological_process |
GO:0006090 |
pyruvate metabolic process |
| cellular_component |
GO:0009343 |
biotin carboxylase complex |
| cellular_component |
GO:0009507 |
chloroplast |
| molecular_function |
GO:0003989 |
acetyl-CoA carboxylase activity |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004075 |
biotin carboxylase activity |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0003824 |
catalytic activity |
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
| Feature Name | Unique Name | Type |
|---|
| MU51699 | MU51699 | transcribed_cluster |
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR005479 | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | PFAM | PF02786 | CPSase_L_D2 | coord: 1..155
score: 8.5 |
| IPR005479 | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | PROSITE | PS00867 | CPSASE_2 | coord: 119..126
scor |
| IPR005482 | Biotin carboxylase, C-terminal | PFAM | PF02785 | Biotin_carb_C | coord: 169..274
score: 1.2 |
| IPR005482 | Biotin carboxylase, C-terminal | SMART | SM00878 | Biotin_carb_C_2 | coord: 169..275
score: 2.1 |
| IPR011054 | Rudiment single hybrid motif | unknown | SSF51246 | Rudiment single hybrid motif | coord: 164..280
score: 3.82 |
| IPR011761 | ATP-grasp fold | PROFILE | PS50975 | ATP_GRASP | coord: 30..150
score: 21 |
| IPR011764 | Biotin carboxylation domain | PROFILE | PS50979 | BC | coord: 19..279
score: 27 |
| IPR013815 | ATP-grasp fold, subdomain 1 | GENE3D | G3DSA:3.30.1490.20 | | coord: 1..35
score: 4. |
| IPR013816 | ATP-grasp fold, subdomain 2 | GENE3D | G3DSA:3.30.470.20 | | coord: 36..281
score: 1.2E |
| None | No IPR available | PANTHER | PTHR18866 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE | coord: 1..286
score: 7.8E |
| None | No IPR available | unknown | SSF56059 | Glutathione synthetase ATP-binding domain-like | coord: 1..182
score: 3.01 |
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|
