MELO3C003252.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C003252.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionhistone-lysine N-methyltransferase ASHR1 isoform X1
Locationchr08 : 33765682 .. 33766014 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

mRNA sequence

ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

Coding sequence (CDS)

ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

Protein sequence

MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMRLGLQAKKQQQSLLKYIEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN
Homology
[Close]
BLAST of MELO3C003252.2 vs. NCBI nr
Match: XP_016903467.1 (PREDICTED: uncharacterized protein LOC107992206 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 40/111 (36.04%), Postives = 71/111 (63.96%), Query Frame = 0 

Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMR-LGLQAKKQQQSLLKYIE 60
           M Q  +EE++++F+QE+ GI+ +L K+P IE  L+ L+K+M  + LQ++KQQQ++L Y+E
Sbjct: 1   MVQTRIEERMESFEQEVAGIKKELMKMPMIESTLIELSKNMETMRLQSEKQQQAILSYME 60

Query: 61  GNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN 111
            N K +ST    + ES  +      + +G+++S ++I       K +S+EN
Sbjct: 61  ANAKGRSTARERMNESDIQNSPATKSKDGKASSSRDIGETSTERKTDSDEN 111

[Close]
BLAST of MELO3C003252.2 vs. TrEMBL
Match: tr|A0A1S4E5H0|A0A1S4E5H0_CUCME (uncharacterized protein LOC107992206 OS=Cucumis melo OX=3656 GN=LOC107992206 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.7e-08
Identity = 40/111 (36.04%), Postives = 71/111 (63.96%), Query Frame = 0 

Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMR-LGLQAKKQQQSLLKYIE 60
           M Q  +EE++++F+QE+ GI+ +L K+P IE  L+ L+K+M  + LQ++KQQQ++L Y+E
Sbjct: 1   MVQTRIEERMESFEQEVAGIKKELMKMPMIESTLIELSKNMETMRLQSEKQQQAILSYME 60

Query: 61  GNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN 111
            N K +ST    + ES  +      + +G+++S ++I       K +S+EN
Sbjct: 61  ANAKGRSTARERMNESDIQNSPATKSKDGKASSSRDIGETSTERKTDSDEN 111

[Close]
BLAST of MELO3C003252.2 vs. TrEMBL
Match: tr|A0A1S3CR68|A0A1S3CR68_CUCME (histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503403 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-03
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 6   MEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMRL-GLQAKKQQQSLLKYIEGNVKE 65
           +EE+++ FD EI G++ +L K+  I  +L  + K++ L   Q +KQQQ LL ++E N KE
Sbjct: 6   IEERMEVFDLEIAGLKKELSKMLVINASLSEIMKNLELMRFQTEKQQQVLLMFMESNAKE 65

Query: 66  KSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESE 109
           +S M   +TESA +        + E+TS  +I       +G +E
Sbjct: 66  RSMMSERLTESAVRDKSTTKGKKNEATSSCDIGADRNIGEGRNE 109

[Close]
BLAST of MELO3C003252.2 vs. TrEMBL
Match: tr|A0A1S3CPQ4|A0A1S3CPQ4_CUCME (histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503403 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-03
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 6   MEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMRL-GLQAKKQQQSLLKYIEGNVKE 65
           +EE+++ FD EI G++ +L K+  I  +L  + K++ L   Q +KQQQ LL ++E N KE
Sbjct: 6   IEERMEVFDLEIAGLKKELSKMLVINASLSEIMKNLELMRFQTEKQQQVLLMFMESNAKE 65

Query: 66  KSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESE 109
           +S M   +TESA +        + E+TS  +I       +G +E
Sbjct: 66  RSMMSERLTESAVRDKSTTKGKKNEATSSCDIGADRNIGEGRNE 109

The following BLAST results are available for this feature:
BLAST of MELO3C003252.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903467.11.3e-0736.04PREDICTED: uncharacterized protein LOC107992206 [Cucumis melo][more]
BLAST of MELO3C003252.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C003252.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C003252.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E5H0|A0A1S4E5H0_CUCME8.7e-0836.04uncharacterized protein LOC107992206 OS=Cucumis melo OX=3656 GN=LOC107992206 PE=... [more]
tr|A0A1S3CR68|A0A1S3CR68_CUCME1.0e-0334.62histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo OX=3656 GN=L... [more]
tr|A0A1S3CPQ4|A0A1S3CPQ4_CUCME1.0e-0334.62histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo OX=3656 GN=L... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003252.2.1MELO3C003252.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..110

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003252.2Watermelon (97103) v2medwmbB537
MELO3C003252.2Bottle gourd (USVL1VR-Ls)lsimedB160
MELO3C003252.2Watermelon (Charleston Gray)medwcgB531