MELO3C003051 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003051
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent DNA helicase PIF1
Location	chr9 : 10859572 .. 10860317 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATGATGATCCTCTCTCCTGGGGCTACATTGAACATGAAGATGATGATCTTTTCAACTGCGGCCGCATTGAAGGTGATGAATGATAATCCTCTCGACTGCGGCTTCATTGACGATGAAGATAATGATCCTTTCGATTGTGACTGTATTAAAGATGAAGATGATGATTCTCTCGGCCGTGGCCACATTGAAGGTGAAAATGATGATCCTCTTGGCTGCGGCCACATTGAAGATGAAAATGGCGATCCTCTCGACTGCAAATGCATTAAATATGAAGATGACGATCCTCTTGACTGTGAATGCTTTAAAGATGAAGATGATGATCCTCTCAACTGCCGGTACATTGAAGATGAAGATGGTGATCCTCTCAACTGGCCGCATTGAAGATGAAGATGATGATCTTCTCAACTGCTGTCCACATTAAAGATGAAGATGATGATCTTATCAGCTGTGTCCACATTGAAGATGAAGATGATGATCCTCTTGGTTGTGACCACATTGAAGATGAAGATAATAATTCTCTCGATTGTAGTCGTATTAAAGATGATGATTCTATCGACTATGAGCGTATTAAAGATGAAGATGATGATCCTTCGGCTGTAGTCGCATTGAAGAAGATGAAGATGATGGTCCTCTCGGTTGCAATTGCATTGAAGATGAAGATGATGATCCTCTCGACTTCAGTCGTATTAAAGAAGATGAAGATGAAGATCCTCTCGACTGTAACACATGTGAGAAGATGA

mRNA sequence

ATGAACATGATGATCCTCTCTCCTGGGGCTACATTGAACATGAAGATGATGATCTTTTCAACTGCGGCCGCATTGAAGGTGATGAATGATAATCCTCTCGACTGCGGCTTCATTGACGATGAAGATAATGATCCTTTCGATTGTGACTGTATTAAAGATGAAGATGATGATTCTCTCGGCCGTGGCCACATTGAAGGTGAAAATGATGATCCTCTTGGCTGCGGCCACATTGAAGATGAAAATGGCGATCCTCTCGACTGCAAATGCATTAAATATGAAGATGACGATCCTCTTGACTGTGAATGCTTTAAAGATGAAGATGATGATCCTCTCAACTGCCGGTACATTGAAGATGAAGATGATGAAGATGATGATCTTATCAGCTGTGTCCACATTGAAGATGAAGATGATGATCCTCTTGGTTGTGACCACATTGAAGATGAAGATAATAATTCTCTCGATTGTAGTCGTATTAAAGATGATGATTCTATCGACTATGAGCGTATTAAAGATGAAGATGATGATCCTTCGGCTGTAGTCGCATTGAAGAAGATGAAGATGATGGTCCTCTCGGTTGCAATTGCATTGAAGATGAAGATGATGATCCTCTCGACTTCAGTCGTATTAAAGAAGATGAAGATGAAGATCCTCTCGACTGTAACACATGTGAGAAGATGA

Coding sequence (CDS)

ATGAACATGATGATCCTCTCTCCTGGGGCTACATTGAACATGAAGATGATGATCTTTTCAACTGCGGCCGCATTGAAGGTGATGAATGATAATCCTCTCGACTGCGGCTTCATTGACGATGAAGATAATGATCCTTTCGATTGTGACTGTATTAAAGATGAAGATGATGATTCTCTCGGCCGTGGCCACATTGAAGGTGAAAATGATGATCCTCTTGGCTGCGGCCACATTGAAGATGAAAATGGCGATCCTCTCGACTGCAAATGCATTAAATATGAAGATGACGATCCTCTTGACTGTGAATGCTTTAAAGATGAAGATGATGATCCTCTCAACTGCCGGTACATTGAAGATGAAGATGATGAAGATGATGATCTTATCAGCTGTGTCCACATTGAAGATGAAGATGATGATCCTCTTGGTTGTGACCACATTGAAGATGAAGATAATAATTCTCTCGATTGTAGTCGTATTAAAGATGATGATTCTATCGACTATGAGCGTATTAAAGATGAAGATGATGATCCTTCGGCTGTAGTCGCATTGAAGAAGATGAAGATGATGGTCCTCTCGGTTGCAATTGCATTGAAGATGAAGATGATGATCCTCTCGACTTCAGTCGTATTAAAGAAGATGAAGATGAAGATCCTCTCGACTGTAACACATGTGAGAAGATGA

Protein sequence

MNMMILSPGATLNMKMMIFSTAAALKVMNDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYEDDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALKKMKMMVLSVAIALKMKMMILSTSVVLKKMKMKILSTVTHVRR*

Homology

[Close]

BLAST of MELO3C003051 vs. Swiss-Prot
Match: LRR4_PLAF7 (Protein PFC0760c OS=Plasmodium falciparum (isolate 3D7) GN=PFC0760c PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-07
Identity = 42/137 (30.66%), Postives = 68/137 (49.64%), Query Frame = 1


Query: 39   DDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYEDDDPL 98
            DDED+D    D   ++DDD+       G++DD     + +D+NGD  D +   Y+D+D  
Sbjct: 3148 DDEDDDDNGDDDDNEDDDDN--EDDDNGDDDD-----NEDDDNGDDDDNEDDNYDDEDN- 3207

Query: 99   DCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDEDNNSLDCSRI 158
              + +++EDDD     Y  ++DD         + E++DDD    D   D+DN   D    
Sbjct: 3208 --DNYENEDDD----NYANEDDD---------NYENDDDDNYEND---DDDNYENDDDNY 3258

Query: 159  KDDDSIDYERIKDEDDD 176
            ++DD  +YE   D++D+
Sbjct: 3268 ENDDDDNYENGDDDNDN 3258

HSP 2 Score: 42.4 bits (98), Expect = 7.9e-03
Identity = 21/71 (29.58%), Postives = 38/71 (53.52%), Query Frame = 1


Query: 105  DEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDEDNNSLDCSRIKDDDSI 164
            +E++   +C  I  +D+ D   +S  + +DEDDD  G D   ++D+++ D     DDD+ 
Sbjct: 3120 NEEESNNSCYIISSDDEGDKKNVSKQNDDDEDDDDNGDDDDNEDDDDNEDDDNGDDDDNE 3179

Query: 165  DYERIKDEDDD 176
            D +   D+D++
Sbjct: 3180 DDDNGDDDDNE 3190

[Close]

BLAST of MELO3C003051 vs. TrEMBL
Match: K4CCM1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-13
Identity = 58/190 (30.53%), Postives = 98/190 (51.58%), Query Frame = 1


Query: 34  DCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYE 93
           D  + DD  ND  DCD   D DDD      ++ ++DD        D+N D +D     Y+
Sbjct: 49  DGDYGDDGGNDSDDCDDDDDNDDDD---DDVDNDDDD--------DDNDDDVDDDD-DYD 108

Query: 94  DDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDEDNNSL 153
           DDD  D +   D+DDD  +    +D+DD+DDD       +D+DDD    D  +D+DN+  
Sbjct: 109 DDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDD-------DDDDDD--DDDDDDDDDNDDY 168

Query: 154 DCSRIKDDDSIDYERIKDEDDDPSAVVALKKMKMMV--LSVAIALKMKMMILSTSVVLKK 213
           D     D+D+ D +  +D+DDD   V+ +  M M +  + + + + M M ++ T+ ++  
Sbjct: 169 DDDDEDDEDNDDDDDDEDDDDDEEDVMMMMMMMMTMTTMMMMMTMMMTMTMMMTTTMMMM 217

Query: 214 MKMKILSTVT 222
           M + I++ +T
Sbjct: 229 MMVMIMTVMT 217

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BLAST of MELO3C003051 vs. TrEMBL
Match: K4CCM1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 56/199 (28.14%), Postives = 88/199 (44.22%), Query Frame = 1


Query: 39  DDEDNDPFDCDCIKDEDDDSLGRGHIEGEN--DDPLGCGHIEDENGDPLDCKCIKYEDDD 98
           DD+D D  D D   D DDD        G++  +D   C   +D + D  D   +  +DDD
Sbjct: 26  DDDDGDDDDGDGEDDNDDDGDDHDGDYGDDGGNDSDDCDDDDDNDDDDDD---VDNDDDD 85

Query: 99  PLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDD-PLGCDHIEDEDNNSLDC 158
                   ++DD   +  Y +D+DD+DDD       +D+DDD     D  +D+D++  D 
Sbjct: 86  D------DNDDDVDDDDDYDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDDDD 145

Query: 159 SRIKDDDSIDY-----------ERIKDEDDDPSAVVALKKMKMMVLSVAIALKMKMMILS 218
               DDD+ DY           +   DEDDD      +  M MM+    + + M MM+  
Sbjct: 146 DDDDDDDNDDYDDDDEDDEDNDDDDDDEDDDDDEEDVMMMMMMMMTMTTMMMMMTMMMTM 205

Query: 219 TSVVLKKMKMKILSTVTHV 224
           T ++   M M ++  +  V
Sbjct: 206 TMMMTTTMMMMMMVMIMTV 215

HSP 2 Score: 82.8 bits (203), Expect = 5.9e-13
Identity = 64/175 (36.57%), Postives = 81/175 (46.29%), Query Frame = 1


Query: 29  NDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCK 88
           +D+P DC    D+D+ P DCD   D DDD       +  +DDP  C   EDE G   +  
Sbjct: 135 DDDPDDCDH--DDDDGPNDCD--HDGDDDDRDPNDYDRNDDDPNDCVSFEDEYGRNPNDY 194

Query: 89  CIKYEDDDPLDCECFKDE-----DDDPLNCRYIEDED--DEDDDLISCVHIEDE------ 148
               +DDDP DC C  D      DDDP +C   +D D  D DDD   CV  EDE      
Sbjct: 195 DGDGDDDDPDDCNCDDDLDDCDCDDDPDDCDCDDDPDDYDRDDDPNDCVSFEDEYGRDPN 254

Query: 149 -----DDDPLGCDHIED--EDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALK 184
                DD+P   D  ++   D N  DC    DDD  D +R    DDDP+  V+ +
Sbjct: 255 DYDSDDDNPDDYDRDDEYGRDPNDYDC----DDDPDDCDR----DDDPNDCVSFE 297

[Close]

BLAST of MELO3C003051 vs. TrEMBL
Match: A0A0K0ISF5_BRUMA (Uncharacterized protein OS=Brugia malayi PE=4 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10
Identity = 59/166 (35.54%), Postives = 75/166 (45.18%), Query Frame = 1


Query: 29  NDNPLDCGFIDDEDND-PFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENG----- 88
           ND+P  C   DD+D+D P D D      DD  GR   + +  DP  C   +D +      
Sbjct: 38  NDDPNGCDHDDDDDDDDPDDYD-----RDDEYGRDPNDYDGGDPDDCDRDDDPDDYDRDD 97

Query: 89  ----DPLDCKCIKYE-DDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDD 148
               DP D     Y+ DDDP DC    D DDDP       D+ D DD+     +  D DD
Sbjct: 98  EYGRDPND-----YDGDDDPDDC----DRDDDP-------DDYDRDDEYGRDPNDYDCDD 157

Query: 149 DPLGCDHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALK 184
           DP  CDH  D+D+   DC    DDD  D       DDDP+  V+ +
Sbjct: 158 DPDDCDH--DDDDGPNDCDHDGDDDDRDPNDYDRNDDDPNDCVSFE 180

HSP 2 Score: 70.5 bits (171), Expect = 3.0e-09
Identity = 58/165 (35.15%), Postives = 75/165 (45.45%), Query Frame = 1


Query: 40  DEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYEDDDPLD 99
           D D+DP DCD  +D+D D   R    G + +   C      + DP DC     +DD P D
Sbjct: 102 DGDDDPDDCD--RDDDPDDYDRDDEYGRDPNDYDC------DDDPDDCD--HDDDDGPND 161

Query: 100 CECFKDEDD-DPLNCRYIEDEDDEDDDLISCVHIEDE-------------DDDPLGC--- 159
           C+   D+DD DP       D D  DDD   CV  EDE             DDDP  C   
Sbjct: 162 CDHDGDDDDRDP------NDYDRNDDDPNDCVSFEDEYGRNPNDYDGDGDDDDPDDCNCD 221

Query: 160 DHIE----DEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALK 184
           D ++    D+D +  DC    DDD  DY+R    DDDP+  V+ +
Sbjct: 222 DDLDDCDCDDDPDDCDC----DDDPDDYDR----DDDPNDCVSFE 242

HSP 3 Score: 68.9 bits (167), Expect = 8.8e-09
Identity = 66/211 (31.28%), Postives = 87/211 (41.23%), Query Frame = 1


Query: 29  NDNPLDCGFIDDEDND----------------------PFDCDCIKDEDD----DSLGRG 88
           ND+P  C   DD+D+D                      P DCD   D DD    D  GR 
Sbjct: 38  NDDPNGCDHDDDDDDDDPDDYDRDDEYGRDPNDYDGGDPDDCDRDDDPDDYDRDDEYGRD 97

Query: 89  HIEGE-NDDPLGCGHIEDENG---------DPLDCKCIKYEDDDPLDCECFKDEDDDPLN 148
             + + +DDP  C   +D +          DP D  C    DDDP DC+   D+DD P +
Sbjct: 98  PNDYDGDDDPDDCDRDDDPDDYDRDDEYGRDPNDYDC----DDDPDDCD--HDDDDGPND 157

Query: 149 CRYIEDEDD--------EDDDLISCVHIEDE------DDDPLGCDHIEDE---DNNSLDC 184
           C +  D+DD         DDD   CV  EDE      D D  G D   D+   D++  DC
Sbjct: 158 CDHDGDDDDRDPNDYDRNDDDPNDCVSFEDEYGRNPNDYDGDGDDDDPDDCNCDDDLDDC 217

HSP 4 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 53/165 (32.12%), Postives = 67/165 (40.61%), Query Frame = 1


Query: 34  DCGFIDDE-DNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLD------ 93
           DC   +DE D DP D D                 +NDDP GC H +D++ D  D      
Sbjct: 20  DCVLFEDEWDRDPNDWD-----------------DNDDPNGCDHDDDDDDDDPDDYDRDD 79

Query: 94  ---CKCIKYEDDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCD 153
                   Y+  DP DC    D DDDP       D+ D DD+     +  D DDDP  CD
Sbjct: 80  EYGRDPNDYDGGDPDDC----DRDDDP-------DDYDRDDEYGRDPNDYDGDDDPDDCD 139

Query: 154 HIEDEDN-----------NSLDCSRIKDDDSIDYERIKDEDDDPS 178
             +D D+           N  DC    DDD  D +   D+DD P+
Sbjct: 140 RDDDPDDYDRDDEYGRDPNDYDC----DDDPDDCDH--DDDDGPN 150

HSP 5 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = 1


Query: 34  DCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYE 93
           D G  DD+++DP D + + D+DD+      ++ ++D+P     ++D+  DP D + +  +
Sbjct: 188 DAGEPDDDEDDPADDEPVDDDDDEP-----VDDDDDEP-----VDDDAEDPADDEPVDDD 247

Query: 94  DD-DPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDE-DNN 153
           DD DP+D     D+DDDP++    +D+D  DDD    V  +D+D+DP+  D  +D  D++
Sbjct: 248 DDEDPVD----DDDDDDPVD---DDDDDPVDDDDEDPVDDDDDDEDPVDDDDDDDPVDDD 307

Query: 154 SLDCSRIKDDDSIDYERIKDEDDDPS 178
             D   I DD+S D +   D+DDDP+
Sbjct: 308 PADDDPIDDDESADDD---DDDDDPA 313

[Close]

BLAST of MELO3C003051 vs. TrEMBL
Match: L9XEM5_9EURY (Uncharacterized protein OS=Natronococcus amylolyticus DSM 10524 GN=C491_05916 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 47/153 (30.72%), Postives = 82/153 (53.59%), Query Frame = 1


Query: 33  LDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKY 92
           L+ G   +E  +P      ++EDDD+   G  + + DDP     ++D++ +P+D      
Sbjct: 170 LEIGDPGEESYEP------EEEDDDA---GEPDDDEDDPADDEPVDDDDDEPVD-----D 229

Query: 93  EDDDPLDCECFKDEDDDPLNCRYIEDEDDED--DDLISCVHIEDEDDDPLGCDH---IED 152
           +DD+P+D     D+ +DP +   ++D+DDED  DD      ++D+DDDP+  D    ++D
Sbjct: 230 DDDEPVD-----DDAEDPADDEPVDDDDDEDPVDDDDDDDPVDDDDDDPVDDDDEDPVDD 289

Query: 153 EDNNSLDCSRIKDDDSIDYERIKDE--DDDPSA 179
           +D++        DDD +D +   D+  DDD SA
Sbjct: 290 DDDDEDPVDDDDDDDPVDDDPADDDPIDDDESA 303

HSP 2 Score: 75.5 bits (184), Expect = 9.4e-11
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = 1


Query: 39  DDEDNDPFDCDCIKDEDDDSLGRGHIEG-ENDDPLGCGHIEDENGDPLDCKCIKYEDDDP 98
           DD+D+D  D D   D+DDD  G G  +  E+DD       +D++GD  D      +DDD 
Sbjct: 8   DDDDDDDDDDDDDDDDDDDDDGDGDDDDIEDDDDDDDDDDDDDDGDDDDD-----DDDDD 67

Query: 99  LDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIEDEDNNSLDCSR 158
            D +   D+DDD  +  Y +D+D+EDDD        D+DDD  G D  +D+D+++ D   
Sbjct: 68  DDGDDDNDDDDDDDDDGYGDDDDNEDDD--------DDDDDDDGDDDDDDDDDDNGDVDN 127

Query: 159 IKDDDSIDYERIKDEDDDPSAVVALKKMKMMV 190
             DDD+ +     ++DDD +  V   K+ +++
Sbjct: 128 DDDDDNENDSDDAEDDDDDNDDVDNSKVSILI 146

[Close]

BLAST of MELO3C003051 vs. TrEMBL
Match: U6PP51_HAECO (Uncharacterized protein OS=Haemonchus contortus GN=HCOI_01941100 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 1


Query: 34  DCGFIDDE-DNDPFDCDCIKDEDDDSLGRGHIEGE-NDDPLGCGHIEDENGDPLDCKCIK 93
           +C   DDE D D  D +C  D+DDD       E + +DD   C + +D++    +C    
Sbjct: 17  ECDDDDDECDYDDDDDECDYDDDDDECDYDDDECDYDDDDDECDYDDDDD----ECD--- 76

Query: 94  YEDDDPLDCECFKDEDDDPLNCRYIEDED--DEDDDLISCVHIEDEDDDPLGCDHIEDED 153
           Y+DDD    EC  D+DDD   C Y +D+D  D+DDD   C   +D+DDD   CD  +D+D
Sbjct: 77  YDDDDD---ECDYDDDDD--ECDYDDDDDECDDDDDDDEC---DDDDDDDDECDDDDDDD 136

Query: 154 NNSLD-CSRIKDDDSIDYERIKDEDDD 176
           ++  D C    DDD  D +   D+DDD
Sbjct: 137 DDDDDECDDDDDDDDDDDDDDDDDDDD 148

[Close]

BLAST of MELO3C003051 vs. TAIR10
Match: AT3G19510.1 (AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 40/145 (27.59%), Postives = 64/145 (44.14%), Query Frame = 1


Query: 18  IFSTAAALKVMNDNPLDCGF-IDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGH 77
           IF  AAA  V     LDC    DD D++ +D DC+ D ++D       +G +D+      
Sbjct: 346 IFPEAAAALVGGGQNLDCDLPSDDSDDEEYDPDCLNDNENDE------DGSDDNE----E 405

Query: 78  IEDENGDPLDCKCIKYEDDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDED 137
            E+E+G   + +     D+     E FK+  D   +   +  +D EDDD          D
Sbjct: 406 SENEDGSSDETEFTSASDE---MIESFKEGKDIMKDVMALPSDDSEDDDY---------D 465

Query: 138 DDPLGCDHIEDEDNNSLDCSRIKDD 162
            D   CD  +D+++++ DC+   +D
Sbjct: 466 PDAPTCD--DDKESSNSDCTSDTED 466

[Close]

BLAST of MELO3C003051 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27
Identity = 78/174 (44.83%), Postives = 102/174 (58.62%), Query Frame = 1


Query: 43  NDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGD----------------PLD 102
           +DP + + IKDEDDDS+    IE E+DDP+GC  I+D++ D                PL 
Sbjct: 31  DDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDDHLCDDDCLDEDKDEDDPLS 90

Query: 103 CKCIKYED-DDPLDCECFKDED-DDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDH 162
           C  I+YED DDP  C   +DE  DD L+   IEDED++D      +  E+ED DP GC +
Sbjct: 91  CSDIEYEDEDDPFGCGNIEDEGKDDTLDFLRIEDEDEDDPLGYDIIEDENEDHDPFGCGN 150

Query: 163 IEDED-NNSLDCSRIKD---DDSIDYERIKDEDDDPSAVVALK-KMKMMVLSVA 194
           IEDED ++ LDC  I+D   DD +D   I+DEDDDP +   LK KM MM+L  A
Sbjct: 151 IEDEDKDDPLDCGYIEDEDEDDPLDCNSIEDEDDDPLSCNTLKMKMMMMILLAA 204

[Close]

BLAST of MELO3C003051 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24
Identity = 80/177 (45.20%), Postives = 103/177 (58.19%), Query Frame = 1


Query: 25  LKVMNDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGEN---DDPLGCGHIE-DE 84
           +K  +D+ ++   I+DED+DP  CD IKD+DDD L       E+   DDPL C  IE ++
Sbjct: 39  IKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDDHLCDDDCLDEDKDEDDPLSCSDIEYED 98

Query: 85  NGDPLDCKCIKYED-DDPLDCECFKD-EDDDPLNCRYIEDEDDEDDDLISCVHIEDED-D 144
             DP  C  I+ E  DD LD    +D ++DDPL    IEDE +ED D   C +IEDED D
Sbjct: 99  EDDPFGCGNIEDEGKDDTLDFLRIEDEDEDDPLGYDIIEDE-NEDHDPFGCGNIEDEDKD 158

Query: 145 DPLGCDHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALK-KMKMMVLSVA 194
           DPL C +IEDED          +DD +D   I+DEDDDP +   LK KM MM+L  A
Sbjct: 159 DPLDCGYIEDED----------EDDPLDCNSIEDEDDDPLSCNTLKMKMMMMILLAA 204

HSP 2 Score: 47.0 bits (110), Expect = 5.1e-02
Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 1


Query: 125 DLISCVHIEDEDDDPLGCDHIEDEDNNSLDCSRI--KDDDSIDYERIKDEDDD 176
           D+ S   +  + DDP+  + I+DED++S++ +RI  +DDD I  +RIKD+DDD
Sbjct: 19  DIGSYNEVAHKKDDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDD 71

HSP 3 Score: 126.7 bits (317), Expect = 5.1e-26
Identity = 85/170 (50.00%), Postives = 106/170 (62.35%), Query Frame = 1


Query: 30  DNPLDCGFIDDED-NDPFDCDCIKDEDD-DSLGRGHIEGEN-DDPLGCGHI-------ED 89
           DNPLDCG I+D D +DPF C  I+DED  D L  GHIE E+ DDPLGCGH        ED
Sbjct: 34  DNPLDCGSIEDYDEDDPFCCGRIEDEDGYDPLCCGHIEDEHEDDPLGCGHDLLDCSRNED 93

Query: 90  EN-GDPLDCKCIKYEDDDPLDCECFKDED-DDPLNCRYIEDEDDEDDDLISCVHIEDEDD 149
           EN  D L+  C++ + DDP D    +DED DDPL    IEDED  +DDL+ C   +DED+
Sbjct: 94  ENKDDALNYGCME-DKDDPFDYSHIEDEDEDDPLGYVCIEDED--EDDLLGCGCSQDEDE 153

Query: 150 D----------PLGCDHIED-EDNNSLDCSRIKDDDSIDY-ERIKDEDDD 176
           D          PLGCD IE+ +D++ L C RIKD+D + Y   I+DED+D
Sbjct: 154 DDLLDYSYEDHPLGCDCIENKDDDDPLICDRIKDEDDLFYCGCIEDEDED 200

[Close]

BLAST of MELO3C003051 vs. NCBI nr
Match: gi|659083329|ref|XP_008442294.1| (PREDICTED: protein bfr2-like [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 2.9e-21
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 1


Query: 31  NPLDCGFIDDE-DNDPFDC-----DCIKDED---DDSLGRGHIEGENDDPLGCGHIEDEN 90
           +PL CG I+DE ++DP  C     DC ++ED   DD+L  G +E + DDP    HIEDE+
Sbjct: 63  DPLCCGHIEDEHEDDPLGCGHDLLDCSRNEDENKDDALNYGCME-DKDDPFDYSHIEDED 122

Query: 91  -GDPLDCKCIKYED-DDPLDCECFKDEDDD----------PLNCRYIEDEDDED------ 150
             DPL   CI+ ED DD L C C +DED+D          PL C  IE++DD+D      
Sbjct: 123 EDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGCDCIENKDDDDPLICDR 182

Query: 151 ----DDLISCVHIEDEDDD-PLGCDHIEDED-NNSLDCSRIK-DDDSIDYERIKDE---D 177
               DDL  C  IEDED+D PL    I+D+D N+ L C RI+ + D   Y+RI+DE   +
Sbjct: 183 IKDEDDLFYCGCIEDEDEDGPLDFVLIKDKDENDPLSCGRIEVEFDPFCYDRIEDEGKDE 242

HSP 2 Score: 107.1 bits (266), Expect = 4.2e-20
Identity = 80/196 (40.82%), Postives = 102/196 (52.04%), Query Frame = 1


Query: 17  MIFSTAAALKVMNDNP----LDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPL 76
           +I STA  LK + +        C +I+DEDN P DC  I+D D+            DDP 
Sbjct: 5   IILSTATILKTIEEENEKDLFSCDYIEDEDN-PLDCGSIEDYDE------------DDPF 64

Query: 77  GCGHIEDENG-DPLDCKCIKYE-DDDPLDC-----ECFKDED---DDPLNCRYIED---- 136
            CG IEDE+G DPL C  I+ E +DDPL C     +C ++ED   DD LN   +ED    
Sbjct: 65  CCGRIEDEDGYDPLCCGHIEDEHEDDPLGCGHDLLDCSRNEDENKDDALNYGCMEDKDDP 124

Query: 137 ------EDDEDDDLISCVHIEDED-DDPLGCDHIEDEDNNSL------------DCSRIK 175
                 ED+++DD +  V IEDED DD LGC   +DED + L            DC   K
Sbjct: 125 FDYSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGCDCIENK 184

HSP 3 Score: 103.2 bits (256), Expect = 6.0e-19
Identity = 77/189 (40.74%), Postives = 102/189 (53.97%), Query Frame = 1


Query: 30  DNPLDCGFIDDEDNDPFDCDCIKDED-DDSLGRGHIEGEN-DDPLGCGHIEDENGD---- 89
           D+ L+ G ++D+D DPFD   I+DED DD LG   IE E+ DD LGCG  +DE+ D    
Sbjct: 97  DDALNYGCMEDKD-DPFDYSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLD 156

Query: 90  ------PLDCKCIKY-EDDDPLDCECFKDEDDDPLNCRYIEDEDD------------EDD 149
                 PL C CI+  +DDDPL C+  KDE DD   C  IEDED+            +++
Sbjct: 157 YSYEDHPLGCDCIENKDDDDPLICDRIKDE-DDLFYCGCIEDEDEDGPLDFVLIKDKDEN 216

Query: 150 DLISCVHIEDEDDDPLGCDHIEDE---DNNSLDCSRIKDD---------------DSIDY 176
           D +SC  IE E  DP   D IEDE   +++   C RI D+               D +DY
Sbjct: 217 DPLSCGRIEVE-FDPFCYDRIEDEGKDEDDPFGCRRIDDEHEDASLNLDNIKDEYDPLDY 276

HSP 4 Score: 99.4 bits (246), Expect = 8.7e-18
Identity = 77/226 (34.07%), Postives = 111/226 (49.12%), Query Frame = 1


Query: 30  DNPLDCGFIDDEDNDPF-DCDCIKDEDDDSL----------GRGHIEG-ENDDPLGCGHI 89
           D+PL    I+DED D    C C +DED+D L          G   IE  ++DDPL C  I
Sbjct: 123 DDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGCDCIENKDDDDPLICDRI 182

Query: 90  EDENGDPLDCKCIKYEDDD-PLDCECFKDEDD-DPLNCRYI------------EDEDDED 149
           +DE+ D   C CI+ ED+D PLD    KD+D+ DPL+C  I            EDE  ++
Sbjct: 183 KDED-DLFYCGCIEDEDEDGPLDFVLIKDKDENDPLSCGRIEVEFDPFCYDRIEDEGKDE 242

Query: 150 DDLISCVHIEDEDD-------------DPLGCDHIEDEDNN---SLDCSRIKD------- 200
           DD   C  I+DE +             DPL  D IEDED +   ++D S  KD       
Sbjct: 243 DDPFGCRRIDDEHEDASLNLDNIKDEYDPLDYDRIEDEDEDDPLNIDRSEDKDDNDPLGF 302

HSP 5 Score: 124.4 bits (311), Expect = 2.5e-25
Identity = 71/152 (46.71%), Postives = 99/152 (65.13%), Query Frame = 1


Query: 27  VMNDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLD 86
           +++D+P+D   I DED+D  D   I+DEDDDS+   +IE E+DD +   +IEDE+ D +D
Sbjct: 6   LIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDF-YIENEDDDFIDF-YIEDEDDDSID 65

Query: 87  CKCIKYEDDDPLDCECFKDEDDDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCDHIE 146
           C  I+ +DDDP+  + F+DEDDD L C  ++ +      +I  V  ED DDDPLG D+IE
Sbjct: 66  CDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMK-----MMIVSVIFEDGDDDPLGYDNIE 125

Query: 147 DEDNNSLDCSRI--KDDDSIDYERIKDEDDDP 177
           DED +   C  I  +DDDS+ Y  I+DEDDDP
Sbjct: 126 DEDEDPFSCGCIEDEDDDSLSYSHIEDEDDDP 149

[Close]

BLAST of MELO3C003051 vs. NCBI nr
Match: gi|659114284|ref|XP_008456992.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16
Identity = 57/108 (52.78%), Postives = 67/108 (62.04%), Query Frame = 1


Query: 94  DDDPLDCECFKDEDDDPLNCRYIEDEDD---------EDDDLISCVHIEDEDDDPLGCDH 153
           DDDP+D    KDEDDD ++  YIEDEDD         EDDD I   +IEDEDDD + CDH
Sbjct: 8   DDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFID-FYIEDEDDDSIDCDH 67

Query: 154 IEDEDNNSLDCSRIKDDDSIDYERIKDEDDDPSAVVALKKMKMMVLSV 193
           IED           KDDD I ++R +DEDDD    VAL KMKMM++SV
Sbjct: 68  IED-----------KDDDPIGWDRFEDEDDDRLGCVAL-KMKMMIVSV 101

HSP 2 Score: 69.3 bits (168), Expect = 9.6e-09
Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 12  LNMKMMIFSTAAALKVMNDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDP 71
           L MKMMI S     +  +D+PL    I+DED DPF C CI+DEDDDSL   HIE E+DDP
Sbjct: 92  LKMKMMIVSVI--FEDGDDDPLGYDNIEDEDEDPFSCGCIEDEDDDSLSYSHIEDEDDDP 150

Query: 72  L 73
           L
Sbjct: 152 L 150

HSP 3 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 27  VMNDNPLDCGFIDDEDNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDEN-GDPL 86
           ++ND+P+D   I DED+D  D + I+D DD      H++ E++DP G G I+DE+  DP 
Sbjct: 12  LINDDPIDLNCIKDEDDDSIDYNYIEDGDD------HLDYEDEDPFGWGQIQDEDEDDPF 71

Query: 87  DCKCIKYEDDD-PLDCECFKDEDDD-PLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGCD 146
               I+ ED+D P + +  +D+D+D PL+C  IEDED+ D     C  IEDED+ P  C 
Sbjct: 72  SYDHIEDEDEDNPFENDFIEDKDEDYPLDCGCIEDEDEYDPLSYGC--IEDEDEPPC-CG 131

Query: 147 HIEDEDNNSLDCSRIK 160
            IEDED++ LDC++ K
Sbjct: 132 RIEDEDDDPLDCNKWK 138

[Close]

BLAST of MELO3C003051 vs. NCBI nr
Match: gi|659127362|ref|XP_008463663.1| (PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-13
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 1


Query: 42  DNDPFDCDCIKDEDDDSLGRGHIEGENDDPLGCGHIEDENGDPLDCKCIKYEDDDPLDCE 101
           ++DP D +CIKDEDDDS+   +IE  +D      H++             YED+DP    
Sbjct: 14  NDDPIDLNCIKDEDDDSIDYNYIEDGDD------HLD-------------YEDEDPFGWG 73

Query: 102 CFKDED-DDPLNCRYIEDEDDE---DDDLISCVHIEDEDDDPLGCDHIEDEDN-NSLDCS 161
             +DED DDP +  +IEDED++   ++D I     + ++D PL C  IEDED  + L   
Sbjct: 74  QIQDEDEDDPFSYDHIEDEDEDNPFENDFIE----DKDEDYPLDCGCIEDEDEYDPLSYG 133

Query: 162 RIKDDDSID-YERIKDEDDDPSAVVALKKMKMMVLSVA 194
            I+D+D      RI+DEDDDP      K MK++  +++
Sbjct: 134 CIEDEDEPPCCGRIEDEDDDPLDCNKWKMMKILTCNIS 148

HSP 2 Score: 41.6 bits (96), Expect = 2.2e+00
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 1


Query: 131 HIEDE---DDDPLGCDHIEDEDNNSLDCSRIKD-DDSIDYE--------RIKDEDDD 176
           H+E++   +DDP+  + I+DED++S+D + I+D DD +DYE        +I+DED+D
Sbjct: 6   HMENDTLINDDPIDLNCIKDEDDDSIDYNYIEDGDDHLDYEDEDPFGWGQIQDEDED 62

HSP 3 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 1


Query: 30   DNPLDCGF-IDDEDNDPFDCDCIKDEDDDSLGRGHIEGEND--DPLGCG-HIEDENGDPL 89
            ++P DC    DD+ +DP DCD   D+D D      I+ ++D  DP  C    +D+  DP 
Sbjct: 1017 EDPTDCDIDYDDDYDDPTDCDIDDDDDRDDPTDCDIDYDDDRNDPTDCDIDYDDDRDDPT 1076

Query: 90   DCKCIKYED--DDPLDCECFKDED-DDPLNCRYIEDEDDEDDDLISCVHIEDEDDDPLGC 149
            DC  I Y+D  DDP DC+   D+D DDP +C  I+ +DD DD     +  +D+ DDP  C
Sbjct: 1077 DCD-IDYDDDRDDPTDCDIDYDDDCDDPTDCD-IDYDDDRDDPTDCDIDYDDDRDDPTDC 1136

Query: 150  DHIEDEDNNSLDCSRIKDDDSIDYERIKDEDDD 176
            D I+ +D+     + + D D +DY    D  DD
Sbjct: 1137 D-IDYDDDLHNPVNDLPDADHLDYPTDADRYDD 1166

The following BLAST results are available for this feature:

BLAST of MELO3C003051 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRR4_PLAF7	5.3e-07	30.66	Protein PFC0760c OS=Plasmodium falciparum (isolate 3D7) GN=PFC0760c PE=1 SV=1	[more]

BLAST of MELO3C003051 vs. TrEMBL


Match Name	E-value	Identity	Description
K4CCM1_SOLLC	2.6e-13	30.53	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
K4CCM1_SOLLC	1.3e-07	28.14	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0K0ISF5_BRUMA	1.6e-10	35.54	Uncharacterized protein OS=Brugia malayi PE=4 SV=2	[more]
L9XEM5_9EURY	1.5e-08	30.72	Uncharacterized protein OS=Natronococcus amylolyticus DSM 10524 GN=C491_05916 PE...	[more]
U6PP51_HAECO	1.2e-10	37.41	Uncharacterized protein OS=Haemonchus contortus GN=HCOI_01941100 PE=4 SV=1	[more]

BLAST of MELO3C003051 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19510.1	2.8e-06	27.59	Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain	[more]

BLAST of MELO3C003051 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127358\|ref\|XP_008463661.1\|	4.6e-27	44.83	PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]	[more]
gi\|659127358\|ref\|XP_008463661.1\|	2.8e-24	45.20	PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]	[more]
gi\|659083329\|ref\|XP_008442294.1\|	2.9e-21	43.72	PREDICTED: protein bfr2-like [Cucumis melo]	[more]
gi\|659114284\|ref\|XP_008456992.1\|	1.6e-16	52.78	PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]	[more]
gi\|659127362\|ref\|XP_008463663.1\|	1.0e-13	36.71	PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like [C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003051T1	MELO3C003051T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 225..225 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C003051	Cucumber (Chinese Long) v3	cucmeB351
MELO3C003051	Watermelon (97103) v2	mewmbB020
MELO3C003051	Wax gourd	mewgoB015
MELO3C003051	Cucumber (Gy14) v1	cgymeB419
MELO3C003051	Cucurbita maxima (Rimu)	cmameB252
MELO3C003051	Cucurbita maxima (Rimu)	cmameB636
MELO3C003051	Cucurbita moschata (Rifu)	cmomeB240
MELO3C003051	Cucurbita moschata (Rifu)	cmomeB626
MELO3C003051	Wild cucumber (PI 183967)	cpimeB343
MELO3C003051	Cucumber (Chinese Long) v2	cumeB350
MELO3C003051	Watermelon (Charleston Gray)	mewcgB023
MELO3C003051	Watermelon (97103) v1	mewmB014
MELO3C003051	Cucurbita pepo (Zucchini)	cpemeB158
MELO3C003051	Cucurbita pepo (Zucchini)	cpemeB360
MELO3C003051	Bottle gourd (USVL1VR-Ls)	lsimeB007
MELO3C003051	Cucumber (Gy14) v2	cgybmeB294
MELO3C003051	Silver-seed gourd	carmeB0531
MELO3C003051	Silver-seed gourd	carmeB0822