MELO3C003030 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003030
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCamphor resistance CrcB family protein
Locationchr9 : 10420284 .. 10422059 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTCATTTCTCTCTTTACGAGCCCCCTGCCCCCCTGATATCTCGACCCTCACAAAATCTCACGCCCCCCACAAAGATCCGTCGTCTGCCGTCTAATCCGTCGTCCACCGCTTAGTTTCAGCGTCCGCCGCTCTAGATCATTCTCTGCGTTTCATTTAAGTTATAATTAATAAGATAAATTATGAATTAAATATGTGTTATCACATTATCGAAGTGGGTTATTGGTTTTGAGGAAATTGAAATCTTTCACAGTATTTTCTGGAGATTTCGAAGCTCCTAATGATGATAGAGGTGGGTACTATGCATGAACTGTTTTGACCCACCTATAAGGTGATCTTTCTTTGTGGGTAAGTTCTTCTTCTTTTTACTCTTTTTCTTTTTCTTGGTTGTTTTAGATGATTCAGAATCTGTTCTTTTGGTCTGTTCAATTTCAGTACTGCATATTGGTCTGGTCTTCAATACTTGTCGGTGAGCTTGGGTAGTTAAATTCAGGGTAGAAAAAGTTGTCAAAGTTTATTAAAGTTAATGCAGGACAAATACTTTGAAATTGATGCCTAATTCATAGAACTCTTTAAGAGTACTGGGAGGTTCCGGAATTTGTTGATAAAAAGCCTTTAGAAATTTTTGTCATTGTAACAAGAATGTACTTCCTTTGGTCATATTACCCATGGTTTTTAACTTTTTAGCATGTTTGGTTTAGCAAGCAAACCTTTGATAATGTACGATCATTGTTTTCTGTTCTTTCTATTTCTATTTCTTTGCAATCATATTCTGTTCTTTTGAACTTTTATGATTGGGATTTAAGAGAACATGAGCTATCAGACGAAGAGAACTTCGACAAAGTTTAGCTACATTATAATCTAAGCTTTTACAAATATGGCCAAATATCACCATGAATGCTCTTGTTACGTGATATAATATACTAATTTAAATCATGGACAAAATTATATTTGTTTATGGTTTTTTTTTTTAGTCTAGTTTTGTGGTTTCACTTTGACACCTATGTAATTGATTTGGCTAGCTAATTGTGTGTAGTGAATTTTATCTTGTTTATGTATTTGACTTGATATTGATGTTGTGTGTGAGTGTAAAACAAATATTTATAGTTTATGCAGTTCTATCTAACTTGATATTGATGTTGTGCATGAGTGTAAAAAACAATTGAAAAACTGACAGCTTTATCACCATTTAATTACTCTGTTCTTTTGTTTTGTTTTGTTTTAATCTTTGTAGATCTGATTTGCAGATAACTTTTGGTGATCTATTCCAAAAGGGGGCCATGGATTATGGGAGTAGCAACCCGGAAGCCAGGCAAGTAATTCCACTTAATCGAGCAAGAAGTTTAGGCCCTTCATTTAGAAGAAACTCATTTAACTCTTCTGGTTCCGGCTATCAACCTCCTCAAACTGGTCATGATGCTGAAACCGAGAGTGTTTCAGAGGCAGGAGACATAGGGGACCGTGCTCTTTGCAGCAACAGAATAAGTGATAGTGAGCGCTTTAGCTTGTCTCTTGATCGTGCTTTAGAGAATGGTGCAATTGCACCCATGCCAGAGAATATCTTTTTGCAATCCCATGGATTTAGAGGCTGTGAGTCTGCAACAGTTGATGATACTACTGTTTCTTCTGTGCCGTCTTCGGGAGAGCAAAATGTGTCCTCTCTTCCAACTTGTCGTCCCATTGTTCATTCTGAAGACACAAAGCAAGTGGGTTTTATTTTGACATCTTTTCCACGATGGATAAATTGA

mRNA sequence

TTCTTCATTTCTCTCTTTACGAGCCCCCTGCCCCCCTGATATCTCGACCCTCACAAAATCTCACGCCCCCCACAAAGATCCGTCGTCTGCCGTCTAATCCGTCGTCCACCGCTTAGTTTCAGCGTCCGCCGCTCTAGATCATTCTCTGCGTTTCATTTAAGTTATAATTAATAAGATAAATTATGAATTAAATATGTGTTATCACATTATCGAAGTGGGTTATTGGTTTTGAGGAAATTGAAATCTTTCACAGTATTTTCTGGAGATTTCGAAGCTCCTAATGATGATAGAGGTGGGTACTATGCATGAACTGTTTTGACCCACCTATAAGGTGATCTTTCTTTGTGGATCTGATTTGCAGATAACTTTTGGTGATCTATTCCAAAAGGGGGCCATGGATTATGGGAGTAGCAACCCGGAAGCCAGGCAAGTAATTCCACTTAATCGAGCAAGAAGTTTAGGCCCTTCATTTAGAAGAAACTCATTTAACTCTTCTGGTTCCGGCTATCAACCTCCTCAAACTGGTCATGATGCTGAAACCGAGAGTGTTTCAGAGGCAGGAGACATAGGGGACCGTGCTCTTTGCAGCAACAGAATAAGTGATAGTGAGCGCTTTAGCTTGTCTCTTGATCGTGCTTTAGAGAATGGTGCAATTGCACCCATGCCAGAGAATATCTTTTTGCAATCCCATGGATTTAGAGGCTGTGAGTCTGCAACAGTTGATGATACTACTGTTTCTTCTGTGCCGTCTTCGGGAGAGCAAAATGTGTCCTCTCTTCCAACTTGTCGTCCCATTGTTCATTCTGAAGACACAAAGCAAGTGGGTTTTATTTTGACATCTTTTCCACGATGGATAAATTGA

Coding sequence (CDS)

ATGGATTATGGGAGTAGCAACCCGGAAGCCAGGCAAGTAATTCCACTTAATCGAGCAAGAAGTTTAGGCCCTTCATTTAGAAGAAACTCATTTAACTCTTCTGGTTCCGGCTATCAACCTCCTCAAACTGGTCATGATGCTGAAACCGAGAGTGTTTCAGAGGCAGGAGACATAGGGGACCGTGCTCTTTGCAGCAACAGAATAAGTGATAGTGAGCGCTTTAGCTTGTCTCTTGATCGTGCTTTAGAGAATGGTGCAATTGCACCCATGCCAGAGAATATCTTTTTGCAATCCCATGGATTTAGAGGCTGTGAGTCTGCAACAGTTGATGATACTACTGTTTCTTCTGTGCCGTCTTCGGGAGAGCAAAATGTGTCCTCTCTTCCAACTTGTCGTCCCATTGTTCATTCTGAAGACACAAAGCAAGTGGGTTTTATTTTGACATCTTTTCCACGATGGATAAATTGA
Homology
[Close]
BLAST of MELO3C003030 vs. TrEMBL
Match: A0A0A0KMU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373710 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-63
Identity = 127/142 (89.44%), Postives = 130/142 (91.55%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MDYGSSN EARQ IPLNRARSLG SFRRNSFNSSGSGYQPPQTGHD ETESVSEAGDIGD
Sbjct: 1   MDYGSSNAEARQGIPLNRARSLGSSFRRNSFNSSGSGYQPPQTGHDVETESVSEAGDIGD 60

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS 120
           RALCSNRISDSERFSLSLD ALENGAIAP+PENIFLQS+GFRG ESAT+DDTTVSSVP  
Sbjct: 61  RALCSNRISDSERFSLSLDHALENGAIAPIPENIFLQSYGFRGRESATIDDTTVSSVPPL 120

Query: 121 GEQNVSSLPTCRPIVHSEDTKQ 143
            EQNVSS  TCRPIVHS DTKQ
Sbjct: 121 EEQNVSSPSTCRPIVHSGDTKQ 142

[Close]
BLAST of MELO3C003030 vs. TrEMBL
Match: B9RJ52_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1031430 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18
Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 1 

Query: 18  RARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGDRALCSNRISDSERFSLS 77
           R  S+G S RR S + S +   P Q G DAE+E+VSEAGDIGDRAL S+R SDS    +S
Sbjct: 18  RTSSMGSSLRRRSLSLSRT--VPFQIGDDAESENVSEAGDIGDRALNSSRHSDSGSIRVS 77

Query: 78  LDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSSGEQNVSSLPTCRPIVHS 137
           +D ALENG + P+ EN FLQSHGFR   SA  + + VS +P   E+ +S L T   IV +
Sbjct: 78  IDSALENGVVFPIQENNFLQSHGFRSHSSAAFNASPVSPLP---EEIISPLST-DAIVCA 136

Query: 138 EDTKQ 143
           +D +Q
Sbjct: 138 KDNQQ 136

[Close]
BLAST of MELO3C003030 vs. TrEMBL
Match: A5BWA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018905 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MD+ +++ E  +     R+ S G S RR S    G    PPQ   D E+E+VS+AGDIGD
Sbjct: 1   MDHKTNDLEETRSGSFGRSSSAGSSLRRRSCGLPGP--VPPQMDDDIESETVSQAGDIGD 60

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSH--GFRGCESATV 110
           RAL SNRIS+S  F LS D  L+NG + P+PEN  L+ H   FR   + TV
Sbjct: 61  RALHSNRISESSSFRLSFDNXLDNGVVVPIPENSLLKPHEIWFRDATANTV 109

[Close]
BLAST of MELO3C003030 vs. TrEMBL
Match: F6H0U1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03520 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MD+ +++ E  +     R+ S G S RR S    G    PPQ   D E+E+VS+AGDIGD
Sbjct: 48  MDHKTNDLEETRSGSFGRSSSAGSSLRRRSCGLPGP--VPPQMDDDIESETVSQAGDIGD 107

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSH--GFRGCESATV 110
           RAL SNRIS+S  F LS D  L+NG + P+PEN  L+ H   FR   + TV
Sbjct: 108 RALHSNRISESSSFRLSFDNLLDNGVVVPIPENSLLKPHEIWFRDATANTV 156

[Close]
BLAST of MELO3C003030 vs. TrEMBL
Match: A0A059BYI0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04372 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-13
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           M+  + + EAR+ +   R  S G S RR S N S     P Q   D ++E VSEAGDIGD
Sbjct: 8   MELQNDDREARRSMSHGRTSSTGSSLRRRSLNLSS--VLPNQLDDDIDSERVSEAGDIGD 67

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS 120
           RAL S R S+S    LS D A+ENG + P  E+  L   GF   + +T++  +VS V   
Sbjct: 68  RALSSKRYSESGSMRLSADHAIENGIVFPTQEDTLLHPIGFWSRDPSTLN--SVSPVSLV 127

Query: 121 GEQNVSSLPT---CRPIVHSEDTKQV 144
            E+ +S L T    RP+   +D ++V
Sbjct: 128 VEEIISPLSTDGILRPVDEKKDEERV 149

[Close]
BLAST of MELO3C003030 vs. NCBI nr
Match: gi|659131651|ref|XP_008465789.1| (PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 1.6e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD
Sbjct: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS 120
           RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS
Sbjct: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS 120

Query: 121 GEQNVSSLPTCRPIVHSEDTKQ 143
           GEQNVSSLPTCRPIVHSEDTKQ
Sbjct: 121 GEQNVSSLPTCRPIVHSEDTKQ 142

[Close]
BLAST of MELO3C003030 vs. NCBI nr
Match: gi|778702285|ref|XP_011655170.1| (PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-63
Identity = 127/142 (89.44%), Postives = 130/142 (91.55%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MDYGSSN EARQ IPLNRARSLG SFRRNSFNSSGSGYQPPQTGHD ETESVSEAGDIGD
Sbjct: 1   MDYGSSNAEARQGIPLNRARSLGSSFRRNSFNSSGSGYQPPQTGHDVETESVSEAGDIGD 60

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSS 120
           RALCSNRISDSERFSLSLD ALENGAIAP+PENIFLQS+GFRG ESAT+DDTTVSSVP  
Sbjct: 61  RALCSNRISDSERFSLSLDHALENGAIAPIPENIFLQSYGFRGRESATIDDTTVSSVPPL 120

Query: 121 GEQNVSSLPTCRPIVHSEDTKQ 143
            EQNVSS  TCRPIVHS DTKQ
Sbjct: 121 EEQNVSSPSTCRPIVHSGDTKQ 142

[Close]
BLAST of MELO3C003030 vs. NCBI nr
Match: gi|255545422|ref|XP_002513771.1| (PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Ricinus communis])

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 1 

Query: 18  RARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGDRALCSNRISDSERFSLS 77
           R  S+G S RR S + S +   P Q G DAE+E+VSEAGDIGDRAL S+R SDS    +S
Sbjct: 18  RTSSMGSSLRRRSLSLSRT--VPFQIGDDAESENVSEAGDIGDRALNSSRHSDSGSIRVS 77

Query: 78  LDRALENGAIAPMPENIFLQSHGFRGCESATVDDTTVSSVPSSGEQNVSSLPTCRPIVHS 137
           +D ALENG + P+ EN FLQSHGFR   SA  + + VS +P   E+ +S L T   IV +
Sbjct: 78  IDSALENGVVFPIQENNFLQSHGFRSHSSAAFNASPVSPLP---EEIISPLST-DAIVCA 136

Query: 138 EDTKQ 143
           +D +Q
Sbjct: 138 KDNQQ 136

[Close]
BLAST of MELO3C003030 vs. NCBI nr
Match: gi|731428153|ref|XP_010664238.1| (PREDICTED: uncharacterized protein LOC100254107 isoform X1 [Vitis vinifera])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MD+ +++ E  +     R+ S G S RR S    G    PPQ   D E+E+VS+AGDIGD
Sbjct: 11  MDHKTNDLEETRSGSFGRSSSAGSSLRRRSCGLPGP--VPPQMDDDIESETVSQAGDIGD 70

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSH--GFRGCESATV 110
           RAL SNRIS+S  F LS D  L+NG + P+PEN  L+ H   FR   + TV
Sbjct: 71  RALHSNRISESSSFRLSFDNLLDNGVVVPIPENSLLKPHEIWFRDATANTV 119

[Close]
BLAST of MELO3C003030 vs. NCBI nr
Match: gi|302141857|emb|CBI19060.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 1 

Query: 1   MDYGSSNPEARQVIPLNRARSLGPSFRRNSFNSSGSGYQPPQTGHDAETESVSEAGDIGD 60
           MD+ +++ E  +     R+ S G S RR S    G    PPQ   D E+E+VS+AGDIGD
Sbjct: 56  MDHKTNDLEETRSGSFGRSSSAGSSLRRRSCGLPGP--VPPQMDDDIESETVSQAGDIGD 115

Query: 61  RALCSNRISDSERFSLSLDRALENGAIAPMPENIFLQSH--GFRGCESATV 110
           RAL SNRIS+S  F LS D  L+NG + P+PEN  L+ H   FR   + TV
Sbjct: 116 RALHSNRISESSSFRLSFDNLLDNGVVVPIPENSLLKPHEIWFRDATANTV 164

The following BLAST results are available for this feature:
BLAST of MELO3C003030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMU9_CUCSA1.5e-6389.44Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373710 PE=4 SV=1[more]
B9RJ52_RICCO1.9e-1850.40Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1031430 PE=4 SV=1[more]
A5BWA9_VITVI2.2e-1445.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018905 PE=4 SV=1[more]
F6H0U1_VITVI2.2e-1445.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03520 PE=4 SV=... [more]
A0A059BYI0_EUCGR2.4e-1339.04Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04372 PE=4 SV=1[more]
BLAST of MELO3C003030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131651|ref|XP_008465789.1|1.6e-74100.00PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Cucumis melo][more]
gi|778702285|ref|XP_011655170.1|2.1e-6389.44PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Cucumis sativus][more]
gi|255545422|ref|XP_002513771.1|2.7e-1850.40PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c [Ricinus communis][more]
gi|731428153|ref|XP_010664238.1|3.1e-1445.95PREDICTED: uncharacterized protein LOC100254107 isoform X1 [Vitis vinifera][more]
gi|302141857|emb|CBI19060.3|3.1e-1445.95unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48463melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003030T2MELO3C003030T2mRNA
MELO3C003030T1MELO3C003030T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48463MU48463transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003030Cucumber (Gy14) v2cgybmeB294
MELO3C003030Cucumber (Chinese Long) v3cucmeB351
MELO3C003030Watermelon (97103) v2mewmbB020
MELO3C003030Wax gourdmewgoB010
MELO3C003030Cucumber (Gy14) v1cgymeB419
MELO3C003030Cucurbita maxima (Rimu)cmameB636
MELO3C003030Cucurbita moschata (Rifu)cmomeB626
MELO3C003030Wild cucumber (PI 183967)cpimeB343
MELO3C003030Cucumber (Chinese Long) v2cumeB350
MELO3C003030Watermelon (Charleston Gray)mewcgB023
MELO3C003030Cucurbita pepo (Zucchini)cpemeB360
MELO3C003030Bottle gourd (USVL1VR-Ls)lsimeB007