MELO3C002970 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002970
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAnkyrin repeat-containing protein, putative
Locationchr9 : 8949011 .. 8949331 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGTATGTTTGGAAGAAAGGACATTCTTAAGCTTAAAAATGATAGAGGAAACACTCCTCTTCATGTGGCTGCGGCAATGGGATGTGCTAGAATGTGTGGCATCATTGGTTCCGAGGATGAGAAGTTAGTTGATGAGAGGAACAAAGACGGCGAAACTCCACTCTTCTTGGCGGCCCTCCATGACCACAAGAATGCGTTTTATTGTCTTTATGACTTTTGTAAAATGGACCTCGCTCGATTTGAGAGAAATTGCAGGAGGCATTTTAATGGAGATACCATTCTTCATTGTGCTCTCAAAAACGAGCAATTTGGTTAG

mRNA sequence

ATGATCAGTATGTTTGGAAGAAAGGACATTCTTAAGCTTAAAAATGATAGAGGAAACACTCCTCTTCATGTGGCTGCGGCAATGGGATGTGCTAGAATGTGTGGCATCATTGGTTCCGAGGATGAGAAGTTAGTTGATGAGAGGAACAAAGACGGCGAAACTCCACTCTTCTTGGCGGCCCTCCATGACCACAAGAATGCGTTTTATTGTCTTTATGACTTTTGTAAAATGGACCTCGCTCGATTTGAGAGAAATTGCAGGAGGCATTTTAATGGAGATACCATTCTTCATTGTGCTCTCAAAAACGAGCAATTTGGTTAG

Coding sequence (CDS)

ATGATCAGTATGTTTGGAAGAAAGGACATTCTTAAGCTTAAAAATGATAGAGGAAACACTCCTCTTCATGTGGCTGCGGCAATGGGATGTGCTAGAATGTGTGGCATCATTGGTTCCGAGGATGAGAAGTTAGTTGATGAGAGGAACAAAGACGGCGAAACTCCACTCTTCTTGGCGGCCCTCCATGACCACAAGAATGCGTTTTATTGTCTTTATGACTTTTGTAAAATGGACCTCGCTCGATTTGAGAGAAATTGCAGGAGGCATTTTAATGGAGATACCATTCTTCATTGTGCTCTCAAAAACGAGCAATTTGGTTAG

Protein sequence

MISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAALHDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQFG*
Homology
[Close]
BLAST of MELO3C002970 vs. TrEMBL
Match: A0A0A0KQK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G470050 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.2e-44
Identity = 87/103 (84.47%), Postives = 92/103 (89.32%), Query Frame = 1 

Query: 2   ISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAAL 61
           I MF RKDILK+KN+RGNTPLHVAA+MGCARMC IIGS DEKLVDERNKDGETPLFLAAL
Sbjct: 67  ICMFERKDILKIKNERGNTPLHVAASMGCARMCRIIGSVDEKLVDERNKDGETPLFLAAL 126

Query: 62  HDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQ 105
           HDHKNAFYCLY+FCKMD  RFE N RR  +GDTILHC LKNEQ
Sbjct: 127 HDHKNAFYCLYNFCKMDQNRFESNSRRQIDGDTILHCILKNEQ 169

[Close]
BLAST of MELO3C002970 vs. TrEMBL
Match: A0A0A0KNJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469050 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-42
Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1 

Query: 2   ISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAAL 61
           I MF RKDILK++N+RG+TPLHVAA +GCARMC IIGS DEKLVDERNKDGETPLFLAAL
Sbjct: 67  ICMFERKDILKIRNERGDTPLHVAALVGCARMCRIIGSVDEKLVDERNKDGETPLFLAAL 126

Query: 62  HDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQ 105
           HDHKNAFYCLY+FCKMD  RFE N RR  +GDTILHC LKNEQ
Sbjct: 127 HDHKNAFYCLYNFCKMDQNRFESNSRRQIDGDTILHCILKNEQ 169

[Close]
BLAST of MELO3C002970 vs. TrEMBL
Match: D7TE19_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00180 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 8   KDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAALHDHKNA 67
           K++LK++N+RGNT LH+AA+MG   MC  I      L+  RN D ETPLFLAALH  K A
Sbjct: 79  KEVLKIQNERGNTILHLAASMGSMEMCKCIADALPDLIGARNHDSETPLFLAALHGKKEA 138

Query: 68  FYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQF 106
           F CL + C +D  +    CRR+ +GDTILHCA+  E F
Sbjct: 139 FICLDEICGLD--KGNTYCRRN-DGDTILHCAIAGEYF 173

[Close]
BLAST of MELO3C002970 vs. TrEMBL
Match: D7TE17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00240 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 8   KDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAALHDHKNA 67
           K++LK++N+RGNT LH+AA+MG   MC  I      L+  RN D ETPLFLAALH  K A
Sbjct: 21  KEVLKIQNERGNTILHLAASMGSMEMCKCIADALPDLIGARNHDSETPLFLAALHGKKEA 80

Query: 68  FYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQF 106
           F CL + C +D  +    CRR+ +GDTILHCA+  E F
Sbjct: 81  FICLDEICGLD--KGNTYCRRN-DGDTILHCAIAGEYF 115

[Close]
BLAST of MELO3C002970 vs. TrEMBL
Match: V4S1L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006513mg PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-18
Identity = 52/97 (53.61%), Postives = 71/97 (73.20%), Query Frame = 1 

Query: 9   DILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAALHDHKNAF 68
           ++LKL+N++GNT LH+AAA+G A +C  + S+D KLV  RNK+ ETPLFLAALH  K+AF
Sbjct: 71  NVLKLQNEKGNTTLHLAAALGNAALCHCMASKDPKLVAARNKESETPLFLAALHGKKDAF 130

Query: 69  YCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQF 106
            CL+ F   ++ R   +CR++ NGDTILH A+  E F
Sbjct: 131 LCLH-FFNQEMDR-TASCRKN-NGDTILHSAIFGEHF 164

[Close]
BLAST of MELO3C002970 vs. NCBI nr
Match: gi|659131322|ref|XP_008465625.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 4.2e-47
Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 1   MISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAA 60
           MISMF RKDIL++KN+RGNTPLHVAA MGCARMC IIGS DEKLVDERNKDGETPLFLAA
Sbjct: 64  MISMFERKDILRIKNERGNTPLHVAATMGCARMCRIIGSMDEKLVDERNKDGETPLFLAA 123

Query: 61  LHDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQF 106
           LHDHKNAFYCLYDFCKMDL RF++NCRR  NGDTILHCALKN+QF
Sbjct: 124 LHDHKNAFYCLYDFCKMDLVRFDKNCRR-TNGDTILHCALKNDQF 167

[Close]
BLAST of MELO3C002970 vs. NCBI nr
Match: gi|778702933|ref|XP_004143822.2| (PREDICTED: uncharacterized protein LOC101216965 isoform X1 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 7.5e-44
Identity = 87/103 (84.47%), Postives = 92/103 (89.32%), Query Frame = 1 

Query: 2   ISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAAL 61
           I MF RKDILK+KN+RGNTPLHVAA+MGCARMC IIGS DEKLVDERNKDGETPLFLAAL
Sbjct: 67  ICMFERKDILKIKNERGNTPLHVAASMGCARMCRIIGSVDEKLVDERNKDGETPLFLAAL 126

Query: 62  HDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQ 105
           HDHKNAFYCLY+FCKMD  RFE N RR  +GDTILHC LKNEQ
Sbjct: 127 HDHKNAFYCLYNFCKMDQNRFESNSRRQIDGDTILHCILKNEQ 169

[Close]
BLAST of MELO3C002970 vs. NCBI nr
Match: gi|778702940|ref|XP_011655284.1| (PREDICTED: uncharacterized protein LOC101216965 isoform X2 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 7.5e-44
Identity = 87/103 (84.47%), Postives = 92/103 (89.32%), Query Frame = 1 

Query: 2   ISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAAL 61
           I MF RKDILK+KN+RGNTPLHVAA+MGCARMC IIGS DEKLVDERNKDGETPLFLAAL
Sbjct: 67  ICMFERKDILKIKNERGNTPLHVAASMGCARMCRIIGSVDEKLVDERNKDGETPLFLAAL 126

Query: 62  HDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQ 105
           HDHKNAFYCLY+FCKMD  RFE N RR  +GDTILHC LKNEQ
Sbjct: 127 HDHKNAFYCLYNFCKMDQNRFESNSRRQIDGDTILHCILKNEQ 169

[Close]
BLAST of MELO3C002970 vs. NCBI nr
Match: gi|778702926|ref|XP_004143777.2| (PREDICTED: uncharacterized protein LOC101205819 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 3.1e-42
Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1 

Query: 2   ISMFGRKDILKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAAL 61
           I MF RKDILK++N+RG+TPLHVAA +GCARMC IIGS DEKLVDERNKDGETPLFLAAL
Sbjct: 67  ICMFERKDILKIRNERGDTPLHVAALVGCARMCRIIGSVDEKLVDERNKDGETPLFLAAL 126

Query: 62  HDHKNAFYCLYDFCKMDLARFERNCRRHFNGDTILHCALKNEQ 105
           HDHKNAFYCLY+FCKMD  RFE N RR  +GDTILHC LKNEQ
Sbjct: 127 HDHKNAFYCLYNFCKMDQNRFESNSRRQIDGDTILHCILKNEQ 169

[Close]
BLAST of MELO3C002970 vs. NCBI nr
Match: gi|645259447|ref|XP_008235365.1| (PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Prunus mume])

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-18
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 1 

Query: 11  LKLKNDRGNTPLHVAAAMGCARMCGIIGSEDEKLVDERNKDGETPLFLAALHDHKNAFYC 70
           L+++NDRGNTPLH+AA+MG  RMC  I  E   LV+  NKD ETPLFLAALH  K+AF C
Sbjct: 80  LRIQNDRGNTPLHLAASMGNVRMCECIAKEYPCLVNVLNKDNETPLFLAALHGRKDAFLC 139

Query: 71  LYDFC--KMDLARFERNCRRHFNGDTILHCALKNEQF 106
           L+  C    D  +   NCRR  +G+TILHCA+  + F
Sbjct: 140 LHYICTPAFDDPQRYNNCRR-TDGETILHCAILGDYF 175

The following BLAST results are available for this feature:
BLAST of MELO3C002970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQK1_CUCSA5.2e-4484.47Uncharacterized protein OS=Cucumis sativus GN=Csa_5G470050 PE=4 SV=1[more]
A0A0A0KNJ0_CUCSA2.2e-4281.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469050 PE=4 SV=1[more]
D7TE19_VITVI1.7e-1852.04Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00180 PE=4 SV=... [more]
D7TE17_VITVI1.7e-1852.04Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00240 PE=4 SV=... [more]
V4S1L9_9ROSI2.9e-1853.61Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006513mg PE=4 SV=1[more]
BLAST of MELO3C002970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131322|ref|XP_008465625.1|4.2e-4787.62PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo][more]
gi|778702933|ref|XP_004143822.2|7.5e-4484.47PREDICTED: uncharacterized protein LOC101216965 isoform X1 [Cucumis sativus][more]
gi|778702940|ref|XP_011655284.1|7.5e-4484.47PREDICTED: uncharacterized protein LOC101216965 isoform X2 [Cucumis sativus][more]
gi|778702926|ref|XP_004143777.2|3.1e-4281.55PREDICTED: uncharacterized protein LOC101205819 [Cucumis sativus][more]
gi|645259447|ref|XP_008235365.1|1.4e-1854.64PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002970T1MELO3C002970T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainGENE3DG3DSA:1.25.40.20coord: 13..103
score: 1.7
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 16..71
score: 2.
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 17..106
score: 9
IPR020683Ankyrin repeat-containing domainunknownSSF48403Ankyrin repeatcoord: 13..103
score: 2.49
NoneNo IPR availablePANTHERPTHR24177FAMILY NOT NAMEDcoord: 7..105
score: 2.7
NoneNo IPR availablePANTHERPTHR24177:SF30SUBFAMILY NOT NAMEDcoord: 7..105
score: 2.7
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score:

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002970Cucumber (Chinese Long) v3cucmeB359
MELO3C002970Watermelon (97103) v2mewmbB039
MELO3C002970Wax gourdmewgoB035
MELO3C002970Cucumber (Gy14) v1cgymeB004
MELO3C002970Cucurbita maxima (Rimu)cmameB146
MELO3C002970Cucurbita maxima (Rimu)cmameB715
MELO3C002970Cucurbita moschata (Rifu)cmomeB136
MELO3C002970Cucurbita moschata (Rifu)cmomeB706
MELO3C002970Wild cucumber (PI 183967)cpimeB350
MELO3C002970Cucumber (Chinese Long) v2cumeB361
MELO3C002970Watermelon (Charleston Gray)mewcgB003
MELO3C002970Watermelon (97103) v1mewmB004
MELO3C002970Cucurbita pepo (Zucchini)cpemeB742
MELO3C002970Bottle gourd (USVL1VR-Ls)lsimeB164
MELO3C002970Cucumber (Gy14) v2cgybmeB300
MELO3C002970Silver-seed gourdcarmeB0322