MELO3C002964 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002964
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBEST Arabidopsis thaliana protein match is: my s in 105 species: Archae - 10
Locationchr9 : 8814680 .. 8815053 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCATCAGAGAGAAAAAGATATAGGTGGTTTGAACGAGGTCTGAGATCGCAAATATCAGTACAATGCGATTACGCAAAATTGGTGAACGATGAGTCATGCGTCGAGAAAAGTTTTGGAGGATTGAAAAAGGCTAAGTTTCAGGTTATAGCAAGGAAGAAGAAGAAGAAGAAGAGAAGAAAAGTAGTGGAAGGTATACTAAACAGTCTAAACCTGCGTTTAGCCAGGGATCGCATTGGAGCAAAGATCAAAAGCAAAAGTGCAATAATGGTGGCAAGAGACATTCGGGAGTTTGTATGCGAAGAAACATTATTTGTTTCCAATGCAACGAGATGGGGCATTACAAGAGTAAATGTCAAAGCAAAGCTAAGGTAG

mRNA sequence

TGGCATCAGAGAGAAAAAGATATAGGTGGTTTGAACGAGGTCTGAGATCGCAAATATCAGTACAATGCGATTACGCAAAATTGGTGAACGATGAGTCATGCGTCGAGAAAAGTTTTGGAGGATTGAAAAAGGCTAAGTTTCAGGTTATAGCAAGGAAGAAGAAGAAGAAGAAGAGAAGAAAAGTAGTGGAAGGTATACTAAACAGTCTAAACCTGCGTTTAGCCAGGGATCGCATTGGAGCAAAGATCAAAAGCAAAAGTGCAATAATGGTGGCAAGAGACATTCGGGAGTTTGTATGCGAAGAAACATTATTTGTTTCCAATGCAACGAGATGGGGCATTACAAGAGTAAATGTCAAAGCAAAGCTAAGGTAG

Coding sequence (CDS)

TGGCATCAGAGAGAAAAAGATATAGGTGGTTTGAACGAGGTCTGAGATCGCAAATATCAGTACAATGCGATTACGCAAAATTGGTGAACGATGAGTCATGCGTCGAGAAAAGTTTTGGAGGATTGAAAAAGGCTAAGTTTCAGGTTATAGCAAGGAAGAAGAAGAAGAAGAAGAGAAGAAAAGTAGTGGAAGGTATACTAAACAGTCTAAACCTGCGTTTAGCCAGGGATCGCATTGGAGCAAAGATCAAAAGCAAAAGTGCAATAATGGTGGCAAGAGACATTCGGGAGTTTGTATGCGAAGAAACATTATTTGTTTCCAATGCAACGAGATGGGGCATTACAAGAGTAAATGTCAAAGCAAAGCTAAGGTAG

Protein sequence

ASERKRYRWFERGLRSQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITRVNVKAKLR*
Homology
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BLAST of MELO3C002964 vs. NCBI nr
Match: gi|659131739|ref|XP_008465831.1| (PREDICTED: uncharacterized protein LOC103503425 [Cucumis melo])

HSP 1 Score: 241.9 bits (616), Expect = 6.0e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

Query: 1   ASERKRYRWFERGLRSQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRK 60
           ASERKRYRWFERGLRSQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRK
Sbjct: 192 ASERKRYRWFERGLRSQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRK 251

Query: 61  VVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITRVNVKA 120
           VVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITRVNVKA
Sbjct: 252 VVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITRVNVKA 311

Query: 121 KLR 124
           KLR
Sbjct: 312 KLR 314

The following BLAST results are available for this feature:
BLAST of MELO3C002964 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131739|ref|XP_008465831.1|6.0e-61100.00PREDICTED: uncharacterized protein LOC103503425 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002964T1MELO3C002964T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002964Silver-seed gourdcarmeB0322
MELO3C002964Cucumber (Chinese Long) v3cucmeB359
MELO3C002964Watermelon (97103) v2mewmbB039
MELO3C002964Watermelon (97103) v2mewmbB040
MELO3C002964Wax gourdmewgoB023
MELO3C002964Wax gourdmewgoB035
MELO3C002964Cucumber (Gy14) v1cgymeB004
MELO3C002964Cucurbita maxima (Rimu)cmameB146
MELO3C002964Cucurbita maxima (Rimu)cmameB715
MELO3C002964Cucurbita maxima (Rimu)cmameB716
MELO3C002964Cucurbita moschata (Rifu)cmomeB136
MELO3C002964Cucurbita moschata (Rifu)cmomeB706
MELO3C002964Wild cucumber (PI 183967)cpimeB350
MELO3C002964Cucumber (Chinese Long) v2cumeB361
MELO3C002964Watermelon (Charleston Gray)mewcgB003
MELO3C002964Watermelon (Charleston Gray)mewcgB004
MELO3C002964Watermelon (97103) v1mewmB004
MELO3C002964Watermelon (97103) v1mewmB005
MELO3C002964Cucurbita pepo (Zucchini)cpemeB742
MELO3C002964Bottle gourd (USVL1VR-Ls)lsimeB162
MELO3C002964Bottle gourd (USVL1VR-Ls)lsimeB164
MELO3C002964Cucumber (Gy14) v2cgybmeB300