MELO3C002938 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002938
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPlant self-incompatibility protein S1 family
Locationchr9 : 8119436 .. 8119873 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAATGTGGTCGTTCTGTGGCTTGCCATGATGGTTTTGGTTGAGGGTCAAGTTTCGAAGTGGTCGAAACCTCCGCCGCTACCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGCTATCAAAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCGTTTGGTTAAACAAGGAGATGAATTTCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCCTGTTTTGGTGTAGATTGGAGAAGCCGGATGCATATGTCGCTTTTGAAAGCTTTTGGCCTGAAACGAAGAACGTTTGGCTTCGTCATAGATGCGGGAATCAAGGAACTTGTATTTGGACTGCCAAAGACGATGGAATTTATTTGAGAAATATGCCTACTAATGCTGATGAATTTGTTCACAAATGGATCCCTAAATAA

mRNA sequence

ATGAGGAATGTGGTCGTTCTGTGGCTTGCCATGATGGTTTTGGTTGAGGGTCAAGTTTCGAAGTGGTCGAAACCTCCGCCGCTACCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGCTATCAAAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCGTTTGGTTAAACAAGGAGATGAATTTCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCCTGTTTTGGTGTAGATTGGAGAAGCCGGATGCATATGTCGCTTTTGAAAGCTTTTGGCCTGAAACGAAGAACGTTTGGCTTCGTCATAGATGCGGGAATCAAGGAACTTGTATTTGGACTGCCAAAGACGATGGAATTTATTTGAGAAATATGCCTACTAATGCTGATGAATTTGTTCACAAATGGATCCCTAAATAA

Coding sequence (CDS)

ATGAGGAATGTGGTCGTTCTGTGGCTTGCCATGATGGTTTTGGTTGAGGGTCAAGTTTCGAAGTGGTCGAAACCTCCGCCGCTACCTTCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGCTATCAAAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCGTTTGGTTAAACAAGGAGATGAATTTCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCCTGTTTTGGTGTAGATTGGAGAAGCCGGATGCATATGTCGCTTTTGAAAGCTTTTGGCCTGAAACGAAGAACGTTTGGCTTCGTCATAGATGCGGGAATCAAGGAACTTGTATTTGGACTGCCAAAGACGATGGAATTTATTTGAGAAATATGCCTACTAATGCTGATGAATTTGTTCACAAATGGATCCCTAAATAA

Protein sequence

MRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKWIPK*
Homology
[Close]
BLAST of MELO3C002938 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-26
Identity = 58/114 (50.88%), Postives = 77/114 (67.54%), Query Frame = 1 

Query: 30  SRYFVHVVNGLSY-QSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEK 89
           +++ VHVVN L   ++L  HC+SKDDDLG   L   G EF W+F+ENF+GTTL+WC +  
Sbjct: 17  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAP-GTEFNWSFKENFFGTTLYWCYMST 76

Query: 90  PDAYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKW 143
              + A + FW E  + WL++RC N   CIW AKDDGIY++ +P N DEF HKW
Sbjct: 77  DQKHAALDVFWVEGDHSWLQYRC-NWKDCIWIAKDDGIYIKIIPENRDEFSHKW 128

[Close]
BLAST of MELO3C002938 vs. TrEMBL
Match: B9S578_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-25
Identity = 60/114 (52.63%), Postives = 74/114 (64.91%), Query Frame = 1 

Query: 31  RYFVHVVNGLSYQS-LDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEKP 90
           ++ VHVVNGLS    L +HC+S D+DLG H L K G EF W+F  NF  TTL+WC +   
Sbjct: 32  KFHVHVVNGLSRNKILQIHCKSADNDLGAHSLAK-GREFSWSFRINFILTTLYWCHMAPD 91

Query: 91  D-AYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKW 143
           D ++V  + FW      +L  RCG    CIWTAKDDG+YLRN+P N DEF HKW
Sbjct: 92  DHSHVDLKVFWDSQ---YLFERCGGAQQCIWTAKDDGVYLRNIPKNTDEFQHKW 141

[Close]
BLAST of MELO3C002938 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-24
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 1 

Query: 30  SRYFVHVVNGLSY-QSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEK 89
           S + +H+ NGLS  Q+L VHC+SKD DLG  R +  G EF+WNF+ N W TTLFWC L K
Sbjct: 28  SPWEIHIKNGLSDGQALFVHCKSKDSDLG-ERTLSTGAEFKWNFKVNIWDTTLFWCYLRK 87

Query: 90  PDA-YVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKW 143
           P    V FE+FW E K  WLR +C +   C W A+D GIYL++  TN DE +H W
Sbjct: 88  PKGDQVRFEAFWVEKKTRWLRVKC-DGNICNWIAEDTGIYLKDNSTNEDERIHYW 140

[Close]
BLAST of MELO3C002938 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-24
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 1 

Query: 3   NVVVLWLAMMVLVEGQVSKWSKPPPLPSR-YFVHVVNGLSY-QSLDVHCQSKDDDLGYHR 62
           N+V + + + + +   VS      P+P++ + VHVVN LS  Q+L +HC+SKDDDLG H+
Sbjct: 7   NLVAVIVVLALAIRPSVS------PIPTKTWHVHVVNNLSNNQTLFLHCKSKDDDLGEHK 66

Query: 63  LVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYV-AFESFWPETKNVWLRHRCGNQGTCIW 122
           L   G E  W F+ENF+ TTLFWC L KPD +   F+ FW E    + + RC     CIW
Sbjct: 67  LTT-GTESNWKFKENFFQTTLFWCHLRKPDNFCNNFKVFWNED---FFQFRC-RYKDCIW 126

Query: 123 TAKDDGIYLRNMPTNADEFVHKW 143
           TAKD+GIYL+N+P   DE   KW
Sbjct: 127 TAKDEGIYLKNIPEGRDELWQKW 138

[Close]
BLAST of MELO3C002938 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-23
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 1 

Query: 3   NVVVLWLAMMVLVEGQVSKWSKPPPLPSR-YFVHVVNGLSY-QSLDVHCQSKDDDLGYHR 62
           N+VV+ + + + +   VS      P+P++ + VHVVN LS  Q+L VHC+SKDDDLG H 
Sbjct: 11  NLVVVTVVLALAIRPSVS------PIPTKTWHVHVVNNLSNNQTLLVHCKSKDDDLGEHN 70

Query: 63  LVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYV-AFESFWPETKNVWLRHRCGNQGTCIW 122
           L   G EF W F+ENF+ TTLFWC L+K D +   F  FW E    + + RC     CIW
Sbjct: 71  LAA-GTEFAWKFKENFFQTTLFWCYLKKQDKFCNIFNVFWKED---FFQFRC-RYKNCIW 130

Query: 123 TAKDDGIYLRNMPTNADEFVHKW 143
            AK +GIYL+N+P   DE  H+W
Sbjct: 131 IAKVEGIYLKNIPEGHDELWHEW 142

[Close]
BLAST of MELO3C002938 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 94.7 bits (234), Expect = 4.9e-20
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 1 

Query: 13  VLVEGQVSKWSKPPPLPSRYFVHVVNGLSY-QSLDVHCQSKDDDLGYHRLVKQGDEFQWN 72
           VLV G  ++    P + S + V VVNGL+  ++L +HC+SK+DDLG   L K  + F WN
Sbjct: 23  VLVGGTTTRDIIVPKI-SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWN 82

Query: 73  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNM 132
           F EN   +T FWC + K + ++    FW +   V L HRCG +  CIWTAK DG+YL N 
Sbjct: 83  FGENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCGWKN-CIWTAKTDGLYLWNS 142

Query: 133 PTNADEFVHKW 143
            +  D    KW
Sbjct: 143 ASGEDVLSRKW 147

[Close]
BLAST of MELO3C002938 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-19
Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 1 

Query: 27  PLPSRYFVHVVNGLSY-QSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCR 86
           P  S + V V NGL+  ++L +HC+SK++DLG   L K  D F WNF EN   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCY 95

Query: 87  LEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKW 143
           + K D ++  + FW +   V L HRC +   C+WTAK+DG+YL N     D    KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRC-DWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]
BLAST of MELO3C002938 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.5 bits (158), Expect = 3.2e-11
Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 1 

Query: 36  VVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEK-PD--AY 95
           V N L+ + L V C+SKDD+LG H +++ G   + NF++N W  TLFWC L K PD   +
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDH-ILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 96  VAFESFWPETK-NVWLRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKW 143
           VAF+++  + K ++  R+        +W A++DGIY    P    +  + W
Sbjct: 86  VAFDAYRSQWKADIGPRY--------LWIAREDGIYYTQHPETPPKKKYDW 127

[Close]
BLAST of MELO3C002938 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10
Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 45  LDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEK-PD-----AYVAFESF 104
           L VHC+SKDDDLG H ++K G ++++ F +N W TT F C++++ P+      +VA+E+ 
Sbjct: 41  LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 100

Query: 105 WPETKNVWLRHRCGNQGTCIWTAKDDGIY 128
           W +            + +C W  ++DGIY
Sbjct: 101 WSKAL----------EASCKWIGREDGIY 118

[Close]
BLAST of MELO3C002938 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-10
Identity = 40/116 (34.48%), Postives = 54/116 (46.55%), Query Frame = 1 

Query: 34  VHVVNGLS----YQSLDVHCQSKDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEKP 93
           +H+ N L     +  L V C+S   D+G H  VK G  +Q++  +NFW TTLFWC     
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKH-YVKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 94  DAYVAFESFWPETKNVW-LRHRCGNQGTCIWTAKDDGIYLRNMPTNADEFVHKWIP 145
             Y   + F     +V+  +      GT  WTA++DGIY R +       VH W P
Sbjct: 86  PDYRTGQQF-----DVYEYKPGVAQGGTYEWTAREDGIYFR-LNQGTIHKVHNWKP 134

[Close]
BLAST of MELO3C002938 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-72
Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = 1 

Query: 12  MVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWN 71
           MVLVEG+VSKW KPPP PSRYFVHVVNGLSYQSLDVHCQSK+DDLGYH LV +GDE+QWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 72  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWTAKDDGIYLRNM 131
           FEEN WGTTLFWCRLEKPDAYVAFESFWPETKNVWLR RCGNQGTCIWTAKDDGIYLRNM
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIYLRNM 120

Query: 132 PTNADEFVHKWIPK 146
           PTN DEFVHKWIPK
Sbjct: 121 PTNVDEFVHKWIPK 134

[Close]
BLAST of MELO3C002938 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 4.1e-69
Identity = 119/145 (82.07%), Postives = 127/145 (87.59%), Query Frame = 1 

Query: 1   MRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHR 60
           MRNVV+LWLA  V+VEGQVS+W KPPP PSRYFV+VVNGLSY SLDVHCQSKDDDLGYH 
Sbjct: 1   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 60

Query: 61  LVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWT 120
           LV  GD FQWNFEENF+GTTLFWCRLEK DAYVAFESFWPE+ N WLR RCGNQGTC+W 
Sbjct: 61  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQGTCVWI 120

Query: 121 AKDDGIYLRNMPTNADEFVHKWIPK 146
           AKDDGIYLRN+P N DE VHKWI K
Sbjct: 121 AKDDGIYLRNIPVNVDELVHKWISK 145

[Close]
BLAST of MELO3C002938 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 114/135 (84.44%), Postives = 122/135 (90.37%), Query Frame = 1 

Query: 12  MVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWN 71
           MVLVEGQV  WS+PPP  SRYFVHVVNGLSY +LDVHCQSKDDDLGYH LV  GD+FQWN
Sbjct: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60

Query: 72  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQ-GTCIWTAKDDGIYLRN 131
           F ENFWGTTLFWCRLEK DAYVAFESFWPE++N+WLR+RCGNQ GTCIWTAKDDGIYLRN
Sbjct: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 132 MPTNADEFVHKWIPK 146
           + TN DEFVHKWIPK
Sbjct: 121 LSTNVDEFVHKWIPK 135

[Close]
BLAST of MELO3C002938 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 3.0e-64
Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 1 

Query: 12  MVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWN 71
           MVLVE QV  WS+PPP  SRYFVHVVNGLS  SLDVHC+SKDDDLGYH +V  GD+FQWN
Sbjct: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWN 60

Query: 72  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQ-GTCIWTAKDDGIYLRN 131
           FEENFWGTTLFWCRLE P+AY  FESFWPE++N+WLR+RCGNQ GTCIWTAKDDGIYLRN
Sbjct: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 132 MPTNADEFVHKWIPK 146
           MP N DEFVHKWIPK
Sbjct: 121 MPANVDEFVHKWIPK 135

[Close]
BLAST of MELO3C002938 vs. NCBI nr
Match: gi|778730328|ref|XP_011659759.1| (PREDICTED: uncharacterized protein LOC105436263 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-62
Identity = 112/155 (72.26%), Postives = 126/155 (81.29%), Query Frame = 1 

Query: 1   MRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRY---------FVHVVNGLSYQSLDVHCQS 60
           M+NVV+LWL    LV GQV +WS+PPP   RY         +VHV+NGL++ SLDVHCQS
Sbjct: 1   MKNVVILWLVTAALVGGQVLRWSEPPPKRMRYHVHVLNGPYYVHVLNGLNHHSLDVHCQS 60

Query: 61  KDDDLGYHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPET-KNVWLRHR 120
           KD+DLG+H LVK GD+FQWNF EN W TTLFWCRLEK DAYV+FESFWPE+ KN WLRHR
Sbjct: 61  KDNDLGHHYLVKHGDDFQWNFIENLWRTTLFWCRLEKSDAYVSFESFWPESLKNPWLRHR 120

Query: 121 CGNQGTCIWTAKDDGIYLRNMPTNADEFVHKWIPK 146
           CG Q TC+WTAKDDGIYLRNMPTNADEFVHKWIPK
Sbjct: 121 CGTQLTCLWTAKDDGIYLRNMPTNADEFVHKWIPK 155

The following BLAST results are available for this feature:
BLAST of MELO3C002938 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VWE5_PRUPE3.0e-2650.88Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
B9S578_RICCO5.6e-2552.63Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1[more]
A0A0A0K6N8_CUCSA2.8e-2452.17Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1[more]
V4VUI1_9ROSI4.8e-2446.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1[more]
V4TTV3_9ROSI2.4e-2346.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1[more]
BLAST of MELO3C002938 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.14.9e-2042.75 S-protein homologue 1[more]
AT4G29035.11.9e-1943.59 Plant self-incompatibility protein S1 family[more]
AT5G04347.13.2e-1136.04 Plant self-incompatibility protein S1 family[more]
AT5G04350.11.6e-1035.96 Plant self-incompatibility protein S1 family[more]
AT1G28305.12.7e-1034.48 Plant self-incompatibility protein S1 family[more]
BLAST of MELO3C002938 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124355|ref|XP_008462115.1|1.8e-7291.79PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|659124347|ref|XP_008462110.1|4.1e-6982.07PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
gi|659124349|ref|XP_008462111.1|1.2e-6584.44PREDICTED: pumilio homolog 15-like [Cucumis melo][more]
gi|449443935|ref|XP_004139731.1|3.0e-6481.48PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
gi|778730328|ref|XP_011659759.1|3.7e-6272.26PREDICTED: uncharacterized protein LOC105436263 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002938T1MELO3C002938T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 34..142
score: 2.7
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 28..142
score: 5.0
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 28..142
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002938Wax gourdmewgoB023
MELO3C002938Cucumber (Gy14) v1cgymeB460
MELO3C002938Cucurbita maxima (Rimu)cmameB716
MELO3C002938Cucurbita moschata (Rifu)cmomeB135
MELO3C002938Cucurbita moschata (Rifu)cmomeB705
MELO3C002938Wild cucumber (PI 183967)cpimeB350
MELO3C002938Cucumber (Chinese Long) v2cumeB361
MELO3C002938Watermelon (Charleston Gray)mewcgB004
MELO3C002938Watermelon (97103) v1mewmB005
MELO3C002938Cucurbita pepo (Zucchini)cpemeB078
MELO3C002938Cucurbita pepo (Zucchini)cpemeB741
MELO3C002938Bottle gourd (USVL1VR-Ls)lsimeB162
MELO3C002938Cucumber (Gy14) v2cgybmeB300
MELO3C002938Silver-seed gourdcarmeB1030
MELO3C002938Cucumber (Chinese Long) v3cucmeB359
MELO3C002938Watermelon (97103) v2mewmbB040