MELO3C002934 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002934
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent RNA helicase
Location	chr9 : 8052639 .. 8055565 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTCCCGCCATTGATGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCGTCGTTCGTGTGTCCTCACTATTCTTCACCTTCGATTCAGGCCTCCAGGTTTTGCCGCCATAAACCTCTCGCCTTCTACTCTACCTATCCAGTTCGATTTCGACCTTCCTTTCAGTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGACGAGGATGAAGATGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGAATTCGAGCAGAGCTACGATGAAGTGGAATTGTCGATGGACGCTTCAGAAATTTCTAATGCACCCGAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGCGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGCATCGATAAGTTTCAAGTAAATCATACATTTATTTGTAATATTGAAGAATGTCATGACATATCCTATCAATTCGCATGAACTTTACCAACTGTAGTCTTGCAATTTTATCATTTGTGTTAGCGGCTAGCCATACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAATTTCGCGAGTTTCGGTAAACAATTTCTGCATTTTTTGCTAACTATTTCTGCTTTTATATCGATTAGTTTTTTTAAGTCATTATCCTTCTATTGTTTCAGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCAGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGGTAAGATATCAACATGTTCTAGTTATGGACGAACTTGTCAACGACCTCCAATCAAGTGGCAAGAGCCTAGCATGGGGTTCCGTCTAAGTAGCTCATTTTATCCATGATTTTTCTCCCTTTCTTGTCTTCTTTTAAAATCGTATGGGATACATTTTACAGAACTTTTTTTTTTCTATAATTTTTTTTAATGTCAAAAAAGAAGAAAAACTAGCCTGAAAAAAGAAGACCATAACAGCAACCAAATCAGTTACTGGAAGAGACTCCAATTAGTTAGAACTGAACATTACAGGAAAATTTCGTAGAGAACATACAAGGAGATATTGAAGTGAGACATGCTCTAAACCTCCTCTTTTAGATCCGTTTTGTACCTTGAAGATTCTTTTATATTTCGGTAGTATAATGTTCTGGATAATGATAGCACCATGTGCCAGTACCAGGGAAGTTCTCTATCACAATAGGAGGTATGAACGCCCCTCAATCATGTCCCAACAACCTACGTCTATCAAACTGACAACGGACCCCATGCAGTATTGTTGTAGCGAGAAGCAAGGTGAGGTCTCAACACCTTGAAGCCATACTAGGCGAGTGTCTTCAATAAGGTGCTTGCCTTATTGCTCCATCTTTCGCCTTTGTCTGCCTTTACCTAAAATGGAAGTAAGCACCTATGACAATCACCTTAGTGTTGAATATCTTTAGTGAGACATCCTTCTAATAAGTTTGCACTAGAAAATGGCATCTTCGATGATTTTAAAAATGTGTAGAGATCTTATCAAGGTACACAAAGGAAACCTGTTTTCTAGAATATAAGAAAATAGTCTCGTCAACAAATTATAGGTATGTAACTTTTCCCCTTCTCACAACCAACCGTTCTACTAAACTAAATCAGTATCCATGATTCTATAAATCAATCTACAAAGAATGTCTACCTCCACCACGGAGAAGAAAAATAAACGAAAGGAATTTCGTGCTTGATCCCTCTAGGATCCAGAATCTTGCCACTAGGCTTATATCTACTACAATGGAAAAATATTTTATGACACAATTACAAATTGGTGCTTTCTCTTTAATGTCAAAGCCTTTTTTACTAACATTTTATCTAACAAATCCCAATTGGTCAAAAACACATTTTAAGTAGAATGTAATACATAACCTGAAATATTCACTATTTGAGATTTATTGAGAGCATAGGGACTAAACTTGGACAATTGAAAGGACAAGGACTAAACAAGTATAAGGACCGAAATGGTATTTTAACCTCCTTAATTATCTTGTTGACTATAGACATTTCATCCAAGATCTTTTCCTCTGTGGAAAATACTCTCTGATTAACGGAGATGGTGCCAGGTGACTACAGACATCTACTTCCTATTCTTTCATAGCTCTTTGATAATCAAACGAGTTTGAGGTGGTTAAGGTGTTTTTGATAACATAAAAAGTTATCAAAATCACTTTGGTTTTACAGGACTATGAATCGTGTATATTTTTGTTTTCAATATATATGTGTGTATATATATAGATAAATAGATAGGTAGATAGATAGATTATTTTCTTACCAACTGCGGAAATGTTTTTTTTTTACCCCTTCCAATTCAAGCATATTGTTTGAATTATAATAGGTTGTTGAATATATTTTCATGCAGTGTTGGAATGGCCACATCTGCAAGTGGACTATTTCATGTGGATGTGATTGTTTTGGATGAAGTTCATTACCTAAGTGATATTTCTCGAGGCACAGTGTGGGAAGAGATTGTGAGTATTTGTTAATGCGGATTCTCATTTGGTCTAACTTGGTAACGCTTGTTCTATTAATCAGATAGTGAATATTTTAGGTTATTTATTGCCCAAAAGAAGTGCAACTTATTTGTCTCTCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGGTAATGTTTTCTATAAGCACCTGA

mRNA sequence

ATGGCGATTCCCGCCATTGATGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCGTCGTTCGTGTGTCCTCACTATTCTTCACCTTCGATTCAGGCCTCCAGGTTTTGCCGCCATAAACCTCTCGCCTTCTACTCTACCTATCCAGTTCGATTTCGACCTTCCTTTCAGTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGACGAGGATGAAGATGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGAATTCGAGCAGAGCTACGATGAAGTGGAATTGTCGATGGACGCTTCAGAAATTTCTAATGCACCCGAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGCGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGCATCGATAAGTTTCAACGGCTAGCCATACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAATTTCGCGAGTTTCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCAGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCACATCTGCAAGTGGACTATTTCATGTGGATGTGATTGTTTTGGATGAAGTTCATTACCTAAGTGATATTTCTCGAGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAACTTATTTGTCTCTCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGGTAATGTTTTCTATAAGCACCTGA

Coding sequence (CDS)

ATGGCGATTCCCGCCATTGATGTCTACTCCATCATTTCTCTTCAACATCTCTGCCCCCCGCCGTTATCTTATCCTTTCCCGTCGTTCGTGTGTCCTCACTATTCTTCACCTTCGATTCAGGCCTCCAGGTTTTGCCGCCATAAACCTCTCGCCTTCTACTCTACCTATCCAGTTCGATTTCGACCTTCCTTTCAGTCTCCGAGGTCCATTTTCTCTGAAAAATCCCAACTCTCCGATGTTGACGAAGACGAGGATGAAGATGAGGATGAAGACGACGAAGACGACGTGGCAGCCGAGGAGTACGACAGCGATGCATTGGGAGAATTCGAGCAGAGCTACGATGAAGTGGAATTGTCGATGGACGCTTCAGAAATTTCTAATGCACCCGAGGAGTTCAAATGGCAGAGAGTGGAAAAGCTTCTCGGCGAAGTTAGAGAGTTTGGAGAAGGAATTATCGATGTCGATGAGCTTGCTTCAGTTTATAATTTCCGCATCGATAAGTTTCAACGGCTAGCCATACAAGCATTCTTGAGAGGATCATCGGTAGTGGTATCGGCTCCTACCAGCAGTGGAAAGACTTTGATTGCGGAGGCTGCGGCCGTTGCCACCGTAGCCAGGAAGAGACGATTGTTTTACACGACTCCACTGAAAGCATTGTCGAATCAGAAATTTCGCGAGTTTCGTGAGACGTTTGGAGACAGCAACGTTGGGCTTCTAACTGGAGATTCTGCAGTTAATAAAGATGCACCGGTTTTAATCATGACTACAGAAATTTTGCGCAACATGTTGTATCAGAGTGTTGGAATGGCCACATCTGCAAGTGGACTATTTCATGTGGATGTGATTGTTTTGGATGAAGTTCATTACCTAAGTGATATTTCTCGAGGCACAGTGTGGGAAGAGATTGTTATTTATTGCCCAAAAGAAGTGCAACTTATTTGTCTCTCAGCAACGGTTGCAAATCCAGATGAGCTGGCTGGCTGGATTGGTCAGGTAATGTTTTCTATAAGCACCTGA

Protein sequence

MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRFRPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQVMFSIST*

Homology

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BLAST of MELO3C002934 vs. Swiss-Prot
Match: ISE2_ARATH (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana GN=ISE2 PE=1 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 6.7e-107
Identity = 202/276 (73.19%), Postives = 234/276 (84.78%), Query Frame = 1


Query: 63  SFQSP-RSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYD--SDALGEFEQSYD--EVE 122
           SF+S   S+   +SQL + ++DE+E+E+++D+DD AA+EYD  SD +   +   D  E E
Sbjct: 47  SFKSTLNSLSPSQSQLYEEEDDEEEEEEDEDDDDEAADEYDNISDEIRNSDDDDDDEETE 106

Query: 123 LSMDA-SEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAF 182
            S+D  +E +    EF+WQRVEKL   VR+FG  +ID+DEL S+Y+FRIDKFQRLAI+AF
Sbjct: 107 FSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEAF 166

Query: 183 LRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNV 242
           LRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD NV
Sbjct: 167 LRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDNV 226

Query: 243 GLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRG 302
           GLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISRG
Sbjct: 227 GLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRG 286

Query: 303 TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           TVWEEIVIYCPKEVQLICLSATVANPDELAGWIG++
Sbjct: 287 TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEI 322

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BLAST of MELO3C002934 vs. Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKI2 PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 9.0e-43
Identity = 101/260 (38.85%), Postives = 144/260 (55.38%), Query Frame = 1


Query: 72  SEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSMDASEISNAPEE 131
           S KS   ++ E+  E+   D+ DD   +E               ++         + P +
Sbjct: 250 SAKSISEEIMEEATEETTADNADDAEIDELLPIG----------IDFGRTKPVSKSVPVK 309

Query: 132 FKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSG 191
            +W  V  L  ++  F E I +    A  + F +D FQ+ A+    +G SV V+A TS+G
Sbjct: 310 KEWAHVVDLNHKIENFDELIPNP---ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAG 369

Query: 192 KTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPV 251
           KT++AE A         +  YT+P+KALSNQKFR+F+ETF D N+GL+TGD  +N DA  
Sbjct: 370 KTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANC 429

Query: 252 LIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQ 311
           LIMTTEILR+MLY+   +      +  V+ ++ DEVHY++D  RG VWEE++I  P+ V+
Sbjct: 430 LIMTTEILRSMLYRGADL------IRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHVK 489

Query: 312 LICLSATVANPDELAGWIGQ 332
            I LSATV N  E A WIG+
Sbjct: 490 FILLSATVPNTYEFANWIGR 490

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BLAST of MELO3C002934 vs. Swiss-Prot
Match: HELY_MYCLE (Probable helicase HelY OS=Mycobacterium leprae (strain TN) GN=helY PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-40
Identity = 82/170 (48.24%), Postives = 115/170 (67.65%), Query Frame = 1


Query: 163 FRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQ 222
           F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + FYTTPLKALSNQ
Sbjct: 16  FSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGGKCFYTTPLKALSNQ 75

Query: 223 KFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVI 282
           K+ +    +G + +GLLTGD +VN D+PV++MTTE+LRNMLY     + +  GL HV   
Sbjct: 76  KYTDLTARYGRNRIGLLTGDQSVNGDSPVVVMTTEVLRNMLYAD---SFALQGLSHV--- 135

Query: 283 VLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           V+DEVH+++D  RG VWEE++++ P +V+++ LSATV+N +E  GW+  V
Sbjct: 136 VMDEVHFIADRMRGPVWEEVILHLPDDVRMVSLSATVSNAEEFGGWVQTV 179

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BLAST of MELO3C002934 vs. Swiss-Prot
Match: HELY_MYCTU (Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=helY PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 1


Query: 151 IIDVDELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 210
           + ++D   +   F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 211 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 270
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +APV++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 271 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 330
             +  L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 179

Query: 331 QV 333
            V
Sbjct: 184 TV 179

[Close]

BLAST of MELO3C002934 vs. Swiss-Prot
Match: HELY_MYCTO (Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=helY PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 1


Query: 151 IIDVDELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRL 210
           + ++D   +   F +D FQ+ A  A  RG  V+V APT +GKT++ E A    +A   + 
Sbjct: 4   LAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKC 63

Query: 211 FYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMA 270
           FYTTPLKALSNQK  +    +G   +GLLTGD +VN +APV++MTTE+LRNMLY      
Sbjct: 64  FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLY------ 123

Query: 271 TSASGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIG 330
             +  L  +  +V+DEVH+L+D  RG VWEE+++  P +V+++ LSATV+N +E  GWI 
Sbjct: 124 ADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDDVRVVSLSATVSNAEEFGGWIQ 179

Query: 331 QV 333
            V
Sbjct: 184 TV 179

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BLAST of MELO3C002934 vs. TrEMBL
Match: A0A0A0KNK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484640 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 1.3e-173
Identity = 314/332 (94.58%), Postives = 319/332 (96.08%), Query Frame = 1


Query: 1   MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
           MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS     ASRFC HKPLAFYST PV F
Sbjct: 1   MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61  RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM 120
           RPSF SPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61  RPSFHSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGGFEQSYDEVELSM 120

Query: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
           D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180

Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
           SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
           GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EIVIYCPKEVQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQI 327

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BLAST of MELO3C002934 vs. TrEMBL
Match: M5Y8A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000444mg PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.0e-122
Identity = 239/333 (71.77%), Postives = 267/333 (80.18%), Query Frame = 1


Query: 6   IDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRFRPSFQ 65
           +D  SI++  H     LS    S+   H+ + +     FC  K    YS   +RFR +FQ
Sbjct: 1   MDTLSILTPPHTFTRLLSLKRSSYPLLHHLTQTTHVLGFCSPKSPPTYSPSSLRFRVTFQ 60

Query: 66  SPRSIFSEKSQLSDVDEDEDEDE--DEDDEDDVAAEEYDS---DALGE-FEQSYDEVELS 125
           SP S F  KSQLSD DE+EDEDE  +EDD++DVAA+EYD    D + +  EQS DE++ S
Sbjct: 61  SPSSAFPAKSQLSDADEEEDEDEYEEEDDDEDVAADEYDDVPGDIMSDGLEQSDDEIDTS 120

Query: 126 MDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRG 185
           M A+E S  PEEFKWQRVEKL  EV+ FGE +ID +ELAS+Y+FRIDKFQRLAIQAFLRG
Sbjct: 121 MAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRG 180

Query: 186 SSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLL 245
           SSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTTPLKALSNQKFREFRETFGD NVGLL
Sbjct: 181 SSVVVSAPTSSGKTLIAEAAAVATVARGMRLFYTTPLKALSNQKFREFRETFGDDNVGLL 240

Query: 246 TGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVW 305
           TGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S  GLFHVDVIVLDEVHYLSD+ RGTVW
Sbjct: 241 TGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVW 300

Query: 306 EEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EEIVIYCPK+VQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EEIVIYCPKKVQLICLSATVANPDELAGWIGQI 333

[Close]

BLAST of MELO3C002934 vs. TrEMBL
Match: A0A061E5K5_THECC (DEAD/DEAH box helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_010129 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.2e-112
Identity = 221/298 (74.16%), Postives = 249/298 (83.56%), Query Frame = 1


Query: 40  QASRFCRHKPLAFYSTYPVRFRPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDV-AA 99
           Q+  FCR K +      P+ FR SF+S RS FS + QLSD DE+ ++DED+DD+DD  AA
Sbjct: 29  QSFPFCRPKSILS----PLSFRLSFKSRRSPFSSEPQLSDADEELEDDEDDDDDDDYEAA 88

Query: 100 EEYDSDALGE----FEQSYDEVELSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDV 159
           +EYD D  GE     +QS DEVE+S+D    SN  +E  WQRVE+L   VREFG+ +IDV
Sbjct: 89  DEYD-DVSGEVSDDIQQSSDEVEISVD---FSNRRKESTWQRVERLCNLVREFGQEMIDV 148

Query: 160 DELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTT 219
           D LA +Y+FRIDKFQR+AI+AFLRGSSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTT
Sbjct: 149 DALADIYDFRIDKFQRIAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGSRLFYTT 208

Query: 220 PLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSAS 279
           PLKALSNQKFR+FRETFGD+NVGLLTGDSAVNKDA VL++TTEILRNMLY SVGMA+S S
Sbjct: 209 PLKALSNQKFRQFRETFGDNNVGLLTGDSAVNKDAQVLVLTTEILRNMLYNSVGMASSGS 268

Query: 280 GLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           G FHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQ+
Sbjct: 269 GFFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQI 318

[Close]

BLAST of MELO3C002934 vs. TrEMBL
Match: A0A067GVD8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001047mg PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.8e-111
Identity = 211/294 (71.77%), Postives = 249/294 (84.69%), Query Frame = 1


Query: 44  FCRHKPLAFYSTYPVRFRPSFQSPRSIFSEKSQLSDVDE--DEDEDEDEDDEDDVAAEEY 103
           FC  KPL   S+  ++F+ S++SP+S F  + +L+D DE  DE +D+ +DD+D+ AA+EY
Sbjct: 36  FCIPKPLL--SSNSIQFQASYKSPKSFFPTEHKLTDADEAADEYDDDIDDDDDEEAADEY 95

Query: 104 DS---DALGEFEQSYDEVELSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELA 163
           D    +   E +QS DE E+S D+S   +  EEFKWQRVEKL  EV+EFG  +IDVDELA
Sbjct: 96  DDVSGEVSDEIQQSDDEFEVSSDSSPAPSWREEFKWQRVEKLCNEVKEFGNEMIDVDELA 155

Query: 164 SVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKA 223
           S+Y+FRIDKFQR +I+AFLRGSSVVVSAPTSSGKTLIAEAAAVATVA +RR+FYTTPLKA
Sbjct: 156 SIYDFRIDKFQRSSIEAFLRGSSVVVSAPTSSGKTLIAEAAAVATVANQRRIFYTTPLKA 215

Query: 224 LSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFH 283
           LSNQKFREFRETFGD+NVGLLTGDSA+N++A +LIMTTEILRNMLYQSVGM +S SGLF 
Sbjct: 216 LSNQKFREFRETFGDNNVGLLTGDSAINREAQILIMTTEILRNMLYQSVGMVSSESGLFD 275

Query: 284 VDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           VDVIVLDEVHYLSDISRGTVWEEI+IYCPKEVQ+ICLSATVAN DELAGWIGQ+
Sbjct: 276 VDVIVLDEVHYLSDISRGTVWEEIIIYCPKEVQIICLSATVANADELAGWIGQI 327

[Close]

BLAST of MELO3C002934 vs. TrEMBL
Match: V4TEM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030551mg PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.1e-111
Identity = 213/295 (72.20%), Postives = 250/295 (84.75%), Query Frame = 1


Query: 44  FCRHKPLAFYSTYPVRFRPSFQSPRSIFSEKSQLSDVDE--DEDEDEDEDDEDDVAAEEY 103
           FC  KPL   S+  ++F+ S++SP+S F  + +L+D DE  DE +D+ +DD+D+ AA+EY
Sbjct: 36  FCIPKPLL--SSNSIQFQASYKSPKSFFPTEHKLTDADEAGDEYDDDIDDDDDEEAADEY 95

Query: 104 DSDALGE----FEQSYDEVELSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDEL 163
           D D  GE     +QS DE E+S D+S   +  EEFKWQRVEKL  EV+EFG  +IDVDEL
Sbjct: 96  D-DVSGEVSDGIQQSDDEFEVSSDSSPAPSWREEFKWQRVEKLCNEVKEFGNEMIDVDEL 155

Query: 164 ASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 223
           AS+Y+FRIDKFQR +I+AF RGSSVVVSAPTSSGKTLIAEAAAVATVA++RRLFYTTPLK
Sbjct: 156 ASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIAEAAAVATVAKQRRLFYTTPLK 215

Query: 224 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 283
           ALSNQKFREFRETFGD+NVGLLTGDSA+N++A +LIMTTEILRNMLYQSVGM +S SGLF
Sbjct: 216 ALSNQKFREFRETFGDNNVGLLTGDSAINREAQILIMTTEILRNMLYQSVGMVSSESGLF 275

Query: 284 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
            VDVIVLDEVHYLSDISRGTVWEEI+IYCPKEVQ+ICLSATVAN DELAGWIGQ+
Sbjct: 276 DVDVIVLDEVHYLSDISRGTVWEEIIIYCPKEVQIICLSATVANADELAGWIGQI 327

[Close]

BLAST of MELO3C002934 vs. TAIR10
Match: AT1G70070.1 (AT1G70070.1 DEAD/DEAH box helicase, putative)

HSP 1 Score: 388.7 bits (997), Expect = 3.8e-108
Identity = 202/276 (73.19%), Postives = 234/276 (84.78%), Query Frame = 1


Query: 63  SFQSP-RSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYD--SDALGEFEQSYD--EVE 122
           SF+S   S+   +SQL + ++DE+E+E+++D+DD AA+EYD  SD +   +   D  E E
Sbjct: 47  SFKSTLNSLSPSQSQLYEEEDDEEEEEEDEDDDDEAADEYDNISDEIRNSDDDDDDEETE 106

Query: 123 LSMDA-SEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAF 182
            S+D  +E +    EF+WQRVEKL   VR+FG  +ID+DEL S+Y+FRIDKFQRLAI+AF
Sbjct: 107 FSVDLPTESARERVEFRWQRVEKLRSLVRDFGVEMIDIDELISIYDFRIDKFQRLAIEAF 166

Query: 183 LRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNV 242
           LRGSSVVVSAPTSSGKTLIAEAAAV+TVA+ RRLFYTTPLKALSNQKFREFRETFGD NV
Sbjct: 167 LRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALSNQKFREFRETFGDDNV 226

Query: 243 GLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRG 302
           GLLTGDSA+NKDA ++IMTTEILRNMLYQSVGMA+S +GLFHVD IVLDEVHYLSDISRG
Sbjct: 227 GLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRG 286

Query: 303 TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           TVWEEIVIYCPKEVQLICLSATVANPDELAGWIG++
Sbjct: 287 TVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEI 322

[Close]

BLAST of MELO3C002934 vs. TAIR10
Match: AT3G46960.1 (AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-37
Identity = 78/178 (43.82%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 154 VDELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYT 213
           V ++A  + F +D FQ+ AI    +G SV V+A TS+GKT++AE A         R  YT
Sbjct: 350 VPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYT 409

Query: 214 TPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSA 273
            P+K +SNQK+R+F    G  +VGLLTGD ++  +A  LIMTTEILR+MLY+   +    
Sbjct: 410 APIKTISNQKYRDF---CGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRD- 469

Query: 274 SGLFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQ 332
                ++ ++ DEVHY++D+ RG VWEE++I  P+ +  + LSATV N  E A WIG+
Sbjct: 470 -----IEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGR 518

[Close]

BLAST of MELO3C002934 vs. TAIR10
Match: AT2G06990.1 (AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-37
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1


Query: 156 ELASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTP 215
           ++A  Y F++D FQ +++    R  S++VSA TS+GKT +AE A       K+R+ YT+P
Sbjct: 73  DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132

Query: 216 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASG 275
           LKALSNQK+RE +  F D  VGL+TGD  ++ +A  L+MTTEILR MLY+       +  
Sbjct: 133 LKALSNQKYRELQHEFKD--VGLMTGDVTLSPNASCLVMTTEILRAMLYR------GSEV 192

Query: 276 LFHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWI 330
           L  V  ++ DE+HY+ D  RG VWEE +I+ P  ++++ LSAT++N  E A WI
Sbjct: 193 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWI 238

[Close]

BLAST of MELO3C002934 vs. TAIR10
Match: AT1G59760.1 (AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-36
Identity = 79/175 (45.14%), Postives = 111/175 (63.43%), Query Frame = 1


Query: 158 ASVYNFRIDKFQRLAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLK 217
           A  + F +D FQ  AI+    G SV+VSA TS+GKT++A  A   ++   +R+ YT+P+K
Sbjct: 61  AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIK 120

Query: 218 ALSNQKFREFRETFGDSNVGLLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLF 277
           ALSNQK+R+F+E F D  VGL+TGD  ++ +A  L+MTTEILR+M Y+       +  + 
Sbjct: 121 ALSNQKYRDFKEEFSD--VGLMTGDVTIDPNASCLVMTTEILRSMQYK------GSEIMR 180

Query: 278 HVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
            V  I+ DEVHY+ D  RG VWEE ++  PK  + + LSATV N  E A W+ +V
Sbjct: 181 EVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKV 227

[Close]

BLAST of MELO3C002934 vs. NCBI nr
Match: gi|659131497|ref|XP_008465717.1| (PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Cucumis melo])

HSP 1 Score: 659.1 bits (1699), Expect = 4.3e-186
Identity = 331/332 (99.70%), Postives = 332/332 (100.00%), Query Frame = 1


Query: 1   MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
           MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF
Sbjct: 1   MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60

Query: 61  RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM 120
           RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM
Sbjct: 61  RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM 120

Query: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
           DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS
Sbjct: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180

Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
           SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
           GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EIVIYCPKEVQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQI 332

[Close]

BLAST of MELO3C002934 vs. NCBI nr
Match: gi|778702993|ref|XP_011655295.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 1.9e-173
Identity = 314/332 (94.58%), Postives = 319/332 (96.08%), Query Frame = 1


Query: 1   MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
           MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS     ASRFC HKPLAFYST PV F
Sbjct: 1   MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61  RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM 120
           RPSF SPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61  RPSFHSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGGFEQSYDEVELSM 120

Query: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
           D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180

Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
           SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
           GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EIVIYCPKEVQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQI 327

[Close]

BLAST of MELO3C002934 vs. NCBI nr
Match: gi|778702990|ref|XP_011655294.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 1.9e-173
Identity = 314/332 (94.58%), Postives = 319/332 (96.08%), Query Frame = 1


Query: 1   MAIPAIDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRF 60
           MAIPAI+VYSIISLQHLCPPPLSYPFPSF+ PHYS     ASRFC HKPLAFYST PV F
Sbjct: 1   MAIPAINVYSIISLQHLCPPPLSYPFPSFLTPHYS-----ASRFCPHKPLAFYSTRPVPF 60

Query: 61  RPSFQSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGEFEQSYDEVELSM 120
           RPSF SPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALG FEQSYDEVELSM
Sbjct: 61  RPSFHSPRSIFSEKSQLSDVDEDEDEDEDEDDEDDVAAEEYDSDALGGFEQSYDEVELSM 120

Query: 121 DASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRGS 180
           D SEISNA +EFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLA+QAFLRGS
Sbjct: 121 DTSEISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGS 180

Query: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240
           SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT
Sbjct: 181 SVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLT 240

Query: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300
           GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE
Sbjct: 241 GDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVWE 300

Query: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EIVIYCPKEVQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EIVIYCPKEVQLICLSATVANPDELAGWIGQI 327

[Close]

BLAST of MELO3C002934 vs. NCBI nr
Match: gi|645229477|ref|XP_008221485.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Prunus mume])

HSP 1 Score: 446.8 bits (1148), Expect = 3.3e-122
Identity = 240/335 (71.64%), Postives = 268/335 (80.00%), Query Frame = 1


Query: 6   IDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRFRPSFQ 65
           +D  SI++  H     LS    S+   H+ + +  A  FC  K    YS   +RFR +FQ
Sbjct: 1   MDTLSILTPPHTFTRLLSLKRSSYPLLHHLTQTTHALGFCSPKSPPTYSPSSLRFRVTFQ 60

Query: 66  SPRSIFSEKSQLSDVDEDEDEDEDE----DDEDDVAAEEYDS---DALGE-FEQSYDEVE 125
           SP S F  KSQLSD DE+EDEDEDE    DD++DVAA+EYD    D + +  EQS DE+ 
Sbjct: 61  SPSSAFPAKSQLSDADEEEDEDEDEYEEEDDDEDVAADEYDDVPGDIMSDGLEQSDDEIV 120

Query: 126 LSMDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFL 185
            S+ A+E S  PEEFKWQRVEKL  EV+ FGE +ID +ELAS+Y+FRIDKFQRLAIQAFL
Sbjct: 121 TSVAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFL 180

Query: 186 RGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVG 245
           RGSSVVVSAPTSSGKTLIAEAA+VATVAR RRLFYTTPLKALSNQKFREFRETFGD NVG
Sbjct: 181 RGSSVVVSAPTSSGKTLIAEAASVATVARGRRLFYTTPLKALSNQKFREFRETFGDDNVG 240

Query: 246 LLTGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGT 305
           LLTGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S  GLFHVDVIVLDEVHYLSD+ RGT
Sbjct: 241 LLTGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGT 300

Query: 306 VWEEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           VWEEIVIYCPK+VQLICLSATVANPDELAGWIGQ+
Sbjct: 301 VWEEIVIYCPKKVQLICLSATVANPDELAGWIGQI 335

[Close]

BLAST of MELO3C002934 vs. NCBI nr
Match: gi|596295624|ref|XP_007227036.1| (hypothetical protein PRUPE_ppa000444mg [Prunus persica])

HSP 1 Score: 446.4 bits (1147), Expect = 4.4e-122
Identity = 239/333 (71.77%), Postives = 267/333 (80.18%), Query Frame = 1


Query: 6   IDVYSIISLQHLCPPPLSYPFPSFVCPHYSSPSIQASRFCRHKPLAFYSTYPVRFRPSFQ 65
           +D  SI++  H     LS    S+   H+ + +     FC  K    YS   +RFR +FQ
Sbjct: 1   MDTLSILTPPHTFTRLLSLKRSSYPLLHHLTQTTHVLGFCSPKSPPTYSPSSLRFRVTFQ 60

Query: 66  SPRSIFSEKSQLSDVDEDEDEDE--DEDDEDDVAAEEYDS---DALGE-FEQSYDEVELS 125
           SP S F  KSQLSD DE+EDEDE  +EDD++DVAA+EYD    D + +  EQS DE++ S
Sbjct: 61  SPSSAFPAKSQLSDADEEEDEDEYEEEDDDEDVAADEYDDVPGDIMSDGLEQSDDEIDTS 120

Query: 126 MDASEISNAPEEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAIQAFLRG 185
           M A+E S  PEEFKWQRVEKL  EV+ FGE +ID +ELAS+Y+FRIDKFQRLAIQAFLRG
Sbjct: 121 MAAAEPSTRPEEFKWQRVEKLCSEVKVFGEEMIDDEELASIYDFRIDKFQRLAIQAFLRG 180

Query: 186 SSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLL 245
           SSVVVSAPTSSGKTLIAEAAAVATVAR  RLFYTTPLKALSNQKFREFRETFGD NVGLL
Sbjct: 181 SSVVVSAPTSSGKTLIAEAAAVATVARGMRLFYTTPLKALSNQKFREFRETFGDDNVGLL 240

Query: 246 TGDSAVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISRGTVW 305
           TGDSAVNKDA VLIMTTEILRNMLYQSVGMA+S  GLFHVDVIVLDEVHYLSD+ RGTVW
Sbjct: 241 TGDSAVNKDAQVLIMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVW 300

Query: 306 EEIVIYCPKEVQLICLSATVANPDELAGWIGQV 333
           EEIVIYCPK+VQLICLSATVANPDELAGWIGQ+
Sbjct: 301 EEIVIYCPKKVQLICLSATVANPDELAGWIGQI 333

The following BLAST results are available for this feature:

BLAST of MELO3C002934 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ISE2_ARATH	6.7e-107	73.19	DExH-box ATP-dependent RNA helicase DExH15 chloroplastic OS=Arabidopsis thaliana...	[more]
SKI2_YEAST	9.0e-43	38.85	Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
HELY_MYCLE	3.2e-40	48.24	Probable helicase HelY OS=Mycobacterium leprae (strain TN) GN=helY PE=3 SV=1	[more]
HELY_MYCTU	2.1e-39	45.05	Probable helicase HelY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)...	[more]
HELY_MYCTO	2.1e-39	45.05	Probable helicase HelY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)...	[more]

BLAST of MELO3C002934 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK4_CUCSA	1.3e-173	94.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484640 PE=4 SV=1	[more]
M5Y8A0_PRUPE	3.0e-122	71.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000444mg PE=4 SV=1	[more]
A0A061E5K5_THECC	2.2e-112	74.16	DEAD/DEAH box helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_010129 PE=4...	[more]
A0A067GVD8_CITSI	1.8e-111	71.77	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001047mg PE=4 SV=1	[more]
V4TEM8_9ROSI	3.1e-111	72.20	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030551mg PE=4 SV=1	[more]

BLAST of MELO3C002934 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70070.1	3.8e-108	73.19	DEAD/DEAH box helicase, putative	[more]
AT3G46960.1	6.0e-37	43.82	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT2G06990.1	6.0e-37	44.83	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT1G59760.1	1.0e-36	45.14	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]

BLAST of MELO3C002934 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131497\|ref\|XP_008465717.1\|	4.3e-186	99.70	PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase ISE2, chloro...	[more]
gi\|778702993\|ref\|XP_011655295.1\|	1.9e-173	94.58	PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X2 [C...	[more]
gi\|778702990\|ref\|XP_011655294.1\|	1.9e-173	94.58	PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [C...	[more]
gi\|645229477\|ref\|XP_008221485.1\|	3.3e-122	71.64	PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Prunus mume]	[more]
gi\|596295624\|ref\|XP_007227036.1\|	4.4e-122	71.77	hypothetical protein PRUPE_ppa000444mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:0016441	posttranscriptional gene silencing
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0010494	cytoplasmic stress granule
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002934T1	MELO3C002934T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 168..320 score: 2.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 161..338 score: 3.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 173..337 score: 23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 165..331 score: 1.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 132..332 score: 2.56
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 61..322 score: 1.5
None	No IPR available	PANTHER	PTHR24031:SF122	SUBFAMILY NOT NAMED	coord: 61..322 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002934	Watermelon (97103) v2	mewmbB040
MELO3C002934	Wax gourd	mewgoB023
MELO3C002934	Cucumber (Gy14) v1	cgymeB460
MELO3C002934	Cucurbita maxima (Rimu)	cmameB716
MELO3C002934	Cucurbita moschata (Rifu)	cmomeB135
MELO3C002934	Cucurbita moschata (Rifu)	cmomeB705
MELO3C002934	Wild cucumber (PI 183967)	cpimeB350
MELO3C002934	Cucumber (Chinese Long) v2	cumeB361
MELO3C002934	Watermelon (Charleston Gray)	mewcgB004
MELO3C002934	Watermelon (97103) v1	mewmB005
MELO3C002934	Cucurbita pepo (Zucchini)	cpemeB078
MELO3C002934	Cucurbita pepo (Zucchini)	cpemeB741
MELO3C002934	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C002934	Cucumber (Gy14) v2	cgybmeB300
MELO3C002934	Silver-seed gourd	carmeB1030
MELO3C002934	Cucumber (Chinese Long) v3	cucmeB359