MELO3C002925 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002925
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cysteine proteinase inhibitor 8
Location	chr9 : 7825117 .. 7825602 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGCAAAACCACTTTTACAATAAAATATATATCTCTATCTTGGTATTAGCGATGAGTTCTCCGGATGTTGAACTTCCTTGCGTTGAGCCCCAGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGATTTGGAAGGTTTGCAGTGAGGAAGCATAATGAAATAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAACAAGGACGAAGGGGTTTTCGAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCATGTGGAATTATTTGGACGTACAAAGCTAAAGTCTTTTTTAATAATCGGGCTGCAGTGCTTCTCTTAGAGTTTGAAGCTGTGCTTCCTGAGAATGGAAACTAAAGCTGGACTGTCATGTACTCTACCCAACAATATGCAAACTTTAACAAAATTAAATGAAATAAATAAAGCAATTATGCTTCATTATCTTTATTAATTTCTAGTCTCTGTC

mRNA sequence

TAAAGCAAAACCACTTTTACAATAAAATATATATCTCTATCTTGGTATTAGCGATGAGTTCTCCGGATGTTGAACTTCCTTGCGTTGAGCCCCAGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGATTTGGAAGGTTTGCAGTGAGGAAGCATAATGAAATAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAACAAGGACGAAGGGGTTTTCGAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCATGTGGAATTATTTGGACGTACAAAGCTAAAGTCTTTTTTAATAATCGGGCTGCAGTGCTTCTCTTAGAGTTTGAAGCTGTGCTTCCTGAGAATGGAAACTAAAGCTGGACTGTCATGTACTCTACCCAACAATATGCAAACTTTAACAAAATTAAATGAAATAAATAAAGCAATTATGCTTCATTATCTTTATTAATTTCTAGTCTCTGTC

Coding sequence (CDS)

ATGAGTTCTCCGGATGTTGAACTTCCTTGCGTTGAGCCCCAGGTGCCAATTAAGGATGTTGATAGCGAGGAGATACAAGGATTTGGAAGGTTTGCAGTGAGGAAGCATAATGAAATAAGTACAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTGGAACAAGGACGAAGGGGTTTTCGAATAGTTTACACTCTTGTCTTATCAGCTAAAAACTCATGTGGAATTATTTGGACGTACAAAGCTAAAGTCTTTTTTAATAATCGGGCTGCAGTGCTTCTCTTAGAGTTTGAAGCTGTGCTTCCTGAGAATGGAAACTAA

Protein sequence

MSSPDVELPCVEPQVPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGRRGFRIVYTLVLSAKNSCGIIWTYKAKVFFNNRAAVLLLEFEAVLPENGN*

Homology

[Close]

BLAST of MELO3C002925 vs. TrEMBL
Match: A0A0A0KRZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487690 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-38
Identity = 85/107 (79.44%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 1   MSSPDVELPCVEPQVPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGRRG 60
           MSS D+ +P V+P VPIKDVDSEEI+GFG FAV +HNE +TGENLEFVKVINGLEQGRRG
Sbjct: 1   MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNE-ATGENLEFVKVINGLEQGRRG 60

Query: 61  FRIVYTLVLSAKNSCGIIWTYKAKVFFNNRAAVLLLEFEAVLPENGN 108
           FRI +TLVLSAKNS GIIWTYK KVF N RA V LLEFEAVL ENGN
Sbjct: 61  FRIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENGN 106

[Close]

BLAST of MELO3C002925 vs. TrEMBL
Match: A0A0A0KNL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-36
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 1


Query: 15  VPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGRRGFRIVYTLVLSAKNS 74
           VPIKDVDSEEIQG G  AVR HNE STGENLEFVKVINGLE+GRRGF+IVYTLVLSAKNS
Sbjct: 21  VPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVYTLVLSAKNS 80

Query: 75  CGIIWTYKAKVFFNNRAAVLLLEFEAVLPENG 107
            GI+WTYKAKV FNNRAAV L EFEAVLPENG
Sbjct: 81  LGIVWTYKAKVIFNNRAAVRLPEFEAVLPENG 112

[Close]

BLAST of MELO3C002925 vs. TrEMBL
Match: A0A0A0KNH4_CUCSA (Cystatin OS=Cucumis sativus GN=Csa_5G485690 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-08
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 1


Query: 13 PQVPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGR 59
          P VPIKD+DS EIQG+ RFA  +HNEI TG+ L+F + INGLEQGR
Sbjct: 9  PPVPIKDIDSAEIQGYARFATERHNEI-TGDKLQFQRAINGLEQGR 53

[Close]

BLAST of MELO3C002925 vs. TrEMBL
Match: A0A0A0L191_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-06
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 16  PIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGR---RGFR--IVYTLVLS 75
           PI D++   +Q  G+ AV  H+  + GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 76  AKNSCGIIWTYKA---KVFFNNRAAVLLLEFEAVLPEN 106
           AK +  I WTY     KV+       + L FE VLP N
Sbjct: 72  AKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYN 109

[Close]

BLAST of MELO3C002925 vs. NCBI nr
Match: gi|700196015|gb|KGN51192.1| (hypothetical protein Csa_5G487690 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 85/107 (79.44%), Postives = 92/107 (85.98%), Query Frame = 1


Query: 1   MSSPDVELPCVEPQVPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGRRG 60
           MSS D+ +P V+P VPIKDVDSEEI+GFG FAV +HNE +TGENLEFVKVINGLEQGRRG
Sbjct: 1   MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNE-ATGENLEFVKVINGLEQGRRG 60

Query: 61  FRIVYTLVLSAKNSCGIIWTYKAKVFFNNRAAVLLLEFEAVLPENGN 108
           FRI +TLVLSAKNS GIIWTYK KVF N RA V LLEFEAVL ENGN
Sbjct: 61  FRIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENGN 106

[Close]

BLAST of MELO3C002925 vs. NCBI nr
Match: gi|700196016|gb|KGN51193.1| (hypothetical protein Csa_5G487700 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-36
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 1


Query: 15  VPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGRRGFRIVYTLVLSAKNS 74
           VPIKDVDSEEIQG G  AVR HNE STGENLEFVKVINGLE+GRRGF+IVYTLVLSAKNS
Sbjct: 21  VPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVYTLVLSAKNS 80

Query: 75  CGIIWTYKAKVFFNNRAAVLLLEFEAVLPENG 107
            GI+WTYKAKV FNNRAAV L EFEAVLPENG
Sbjct: 81  LGIVWTYKAKVIFNNRAAVRLPEFEAVLPENG 112

[Close]

BLAST of MELO3C002925 vs. NCBI nr
Match: gi|700196013|gb|KGN51190.1| (Cystatin [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-08
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 1


Query: 13 PQVPIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGR 59
          P VPIKD+DS EIQG+ RFA  +HNEI TG+ L+F + INGLEQGR
Sbjct: 9  PPVPIKDIDSAEIQGYARFATERHNEI-TGDKLQFQRAINGLEQGR 53

[Close]

BLAST of MELO3C002925 vs. NCBI nr
Match: gi|700199666|gb|KGN54824.1| (hypothetical protein Csa_4G508520 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-06
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 16  PIKDVDSEEIQGFGRFAVRKHNEISTGENLEFVKVINGLEQGR---RGFR--IVYTLVLS 75
           PI D++   +Q  G+ AV  H+  + GE L+FV+V+NGL+  +    GF   I+Y LVL 
Sbjct: 12  PIIDINDPHVQIIGKLAVEDHDSHNPGEKLKFVRVVNGLKSDKYIGPGFTEVILYHLVLE 71

Query: 76  AKNSCGIIWTYKA---KVFFNNRAAVLLLEFEAVLPEN 106
           AK +  I WTY     KV+       + L FE VLP N
Sbjct: 72  AKTNEEINWTYATKLEKVYSGCLIRHVFLSFEPVLPYN 109

The following BLAST results are available for this feature:

BLAST of MELO3C002925 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRZ8_CUCSA	1.5e-38	79.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487690 PE=4 SV=1	[more]
A0A0A0KNL2_CUCSA	2.4e-36	86.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487700 PE=4 SV=1	[more]
A0A0A0KNH4_CUCSA	2.1e-08	67.39	Cystatin OS=Cucumis sativus GN=Csa_5G485690 PE=4 SV=1	[more]
A0A0A0L191_CUCSA	1.1e-06	39.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508520 PE=4 SV=1	[more]

BLAST of MELO3C002925 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196015\|gb\|KGN51192.1\|	2.1e-38	79.44	hypothetical protein Csa_5G487690 [Cucumis sativus]	[more]
gi\|700196016\|gb\|KGN51193.1\|	3.4e-36	86.96	hypothetical protein Csa_5G487700 [Cucumis sativus]	[more]
gi\|700196013\|gb\|KGN51190.1\|	3.0e-08	67.39	Cystatin [Cucumis sativus]	[more]
gi\|700199666\|gb\|KGN54824.1\|	1.6e-06	39.80	hypothetical protein Csa_4G508520 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020381	Proteinase inhibitor I25, cystatin, conserved region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47261	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002925T1	MELO3C002925T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47261	MU47261	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PRODOM	PD001231		coord: 25..86 score: 3.
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PFAM	PF16845	SQAPI	coord: 17..91 score: 4.1
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 16..86 score: 3.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 17..90 score: 9.23

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002925	Cucurbita moschata (Rifu)	cmomeB135
MELO3C002925	Cucurbita moschata (Rifu)	cmomeB705
MELO3C002925	Wild cucumber (PI 183967)	cpimeB350
MELO3C002925	Cucumber (Chinese Long) v2	cumeB361
MELO3C002925	Cucurbita pepo (Zucchini)	cpemeB078
MELO3C002925	Cucurbita pepo (Zucchini)	cpemeB741
MELO3C002925	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C002925	Cucumber (Gy14) v2	cgybmeB300
MELO3C002925	Silver-seed gourd	carmeB1030
MELO3C002925	Cucumber (Chinese Long) v3	cucmeB359
MELO3C002925	Wax gourd	mewgoB023
MELO3C002925	Cucumber (Gy14) v1	cgymeB460
MELO3C002925	Cucurbita maxima (Rimu)	cmameB716