MELO3C002920 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002920
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_5
Location	chr9 : 7724373 .. 7725677 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCAAGTCGGGCATTTAGTGGAGGGAAGAAGACGAGAGCGTCAATGGCTTCCTCATCCCTTCCCCTTCTTCCCCAACCATTTGCTCGGATTCCATCCTCAACCTTTCAGTCCTCTCAAATTTCTTCTAATCTTCACAACAATATCCGATTCGCTTCCGTCGTCGGCAAATCTCCAACTTCTCTAACTGCTCCGTCTTTCTCCTCTTCTTCCACTTACTCTCCATTTCTTCGCAAATCCATCGCATTTGCCGCCTCCATTTCCCTTCTCATGTGGCCCACTCCAGGTTTTACCATTGCATTATTCTATTAAAATCACCATTTCTTTCCATGTTTGTTTGCGAAATTAGTTGCGTACTATCTTATCCACAATTCTGTATATTCCTAAATTCAAGAATCGATTCCTGTTATTTGGAATCTGAAGTTGTTTAATTAGCCGATTGTCTGCAGCGAATGCCGGATTTCTATCAGGATTCTCTGGAATCGAATCGGTTCCTGGTCCGGAATTGCCTCAAATCGACTTTCTCAATCGCTTCAATGGTTCGATTACTTTCAAATTATTATAAAAATAAAGAGGAGGAAAAAAGGTTCAACCCTTCAATAAAAAACCTAACTTCTGAAACTGGTTTGCAGAAGAAAATCAGAAGAAATACGCGGAAGCTGATGCCAGATTCAAATCATCTCCACTGCTGAAGGAACTTCTAGAGCGATCGAAGATGAACAAGGAAAAGTAAAACAAGAATTTGCTAGGTTTTTCTTTCTTTCTTTATTTTTTCAGGTTTCATACCAAATTTGGTTAACGAATGAAATCGTTGTTTCTCTGTTGTTGTGCAAAACTTCAGGAACCGTCAGAAAATTGTTGATAAATATTGCATCCGTGGTGCCGAATGGGGAGTCGGAGATTGCTCGGCAGAGGGAATGTCGCCGGAGGAGAGGGACAAATTCATCTCGATGTTGAAGCAAAAGGCTGGAGTGGATTGATTGAACTGAAATATGAATGAATTTGTGCTGGGGATTCAGAGCAACCAGTTTTAATGTTGTTTTTTTTTCACATTCATCACAAGGAAGGATTAGCAGAGAGAAGAAATTGAAGCAAAAAGAGGTCTCTACTATATACTCAGTGATAAATCCTTTCATCATTGTGTTCATAAAAGGCTTACTTTTCAACACTTAACTAAGCCTTCAATCTAATGCCCTTCTATCAACTTCTGGGTTGTTACATTAGTTGAGTTATGAATTATTGTTTATAAATAGGGAATAGTTATTCTAATTAACTAATTAATTAATTAATTAATAATTATAAGG

mRNA sequence

ATTTTCAAGTCGGGCATTTAGTGGAGGGAAGAAGACGAGAGCGTCAATGGCTTCCTCATCCCTTCCCCTTCTTCCCCAACCATTTGCTCGGATTCCATCCTCAACCTTTCAGTCCTCTCAAATTTCTTCTAATCTTCACAACAATATCCGATTCGCTTCCGTCGTCGGCAAATCTCCAACTTCTCTAACTGCTCCGTCTTTCTCCTCTTCTTCCACTTACTCTCCATTTCTTCGCAAATCCATCGCATTTGCCGCCTCCATTTCCCTTCTCATGTGGCCCACTCCAGCGAATGCCGGATTTCTATCAGGATTCTCTGGAATCGAATCGGTTCCTGGTCCGGAATTGCCTCAAATCGACTTTCTCAATCGCTTCAATGAAGAAAATCAGAAGAAATACGCGGAAGCTGATGCCAGATTCAAATCATCTCCACTGCTGAAGGAACTTCTAGAGCGATCGAAGATGAACAAGGAAAAGAACCGTCAGAAAATTGTTGATAAATATTGCATCCGTGGTGCCGAATGGGGAGTCGGAGATTGCTCGGCAGAGGGAATGTCGCCGGAGGAGAGGGACAAATTCATCTCGATGTTGAAGCAAAAGGCTGGAGTGGATTGATTGAACTGAAATATGAATGAATTTGTGCTGGGGATTCAGAGCAACCAGTTTTAATGTTGTTTTTTTTTCACATTCATCACAAGGAAGGATTAGCAGAGAGAAGAAATTGAAGCAAAAAGAGGTCTCTACTATATACTCAGTGATAAATCCTTTCATCATTGTGTTCATAAAAGGCTTACTTTTCAACACTTAACTAAGCCTTCAATCTAATGCCCTTCTATCAACTTCTGGGTTGTTACATTAGTTGAGTTATGAATTATTGTTTATAAATAGGGAATAGTTATTCTAATTAACTAATTAATTAATTAATTAATAATTATAAGG

Coding sequence (CDS)

ATGGCTTCCTCATCCCTTCCCCTTCTTCCCCAACCATTTGCTCGGATTCCATCCTCAACCTTTCAGTCCTCTCAAATTTCTTCTAATCTTCACAACAATATCCGATTCGCTTCCGTCGTCGGCAAATCTCCAACTTCTCTAACTGCTCCGTCTTTCTCCTCTTCTTCCACTTACTCTCCATTTCTTCGCAAATCCATCGCATTTGCCGCCTCCATTTCCCTTCTCATGTGGCCCACTCCAGCGAATGCCGGATTTCTATCAGGATTCTCTGGAATCGAATCGGTTCCTGGTCCGGAATTGCCTCAAATCGACTTTCTCAATCGCTTCAATGAAGAAAATCAGAAGAAATACGCGGAAGCTGATGCCAGATTCAAATCATCTCCACTGCTGAAGGAACTTCTAGAGCGATCGAAGATGAACAAGGAAAAGAACCGTCAGAAAATTGTTGATAAATATTGCATCCGTGGTGCCGAATGGGGAGTCGGAGATTGCTCGGCAGAGGGAATGTCGCCGGAGGAGAGGGACAAATTCATCTCGATGTTGAAGCAAAAGGCTGGAGTGGATTGA

Protein sequence

MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSPFLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEADARFKSSPLLKELLERSKMNKEKNRQKIVDKYCIRGAEWGVGDCSAEGMSPEERDKFISMLKQKAGVD*

Homology

[Close]

BLAST of MELO3C002920 vs. TrEMBL
Match: A0A0A0KTZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487730 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-67
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 1


Query: 1   MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP 60
           MASSSLPLLPQPFARIPSSTF SS+ISSNLHNN+RF S+V KSPTSLTAPS SSSSTYSP
Sbjct: 1   MASSSLPLLPQPFARIPSSTFHSSEISSNLHNNVRFTSLVHKSPTSLTAPSSSSSSTYSP 60

Query: 61  FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA 120
            LRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAE 
Sbjct: 61  LLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEF 120

Query: 121 DARFKSSPLLKELLERSKMNKEK 144
           DARFKSSPLLKELLERSKMNKEK
Sbjct: 121 DARFKSSPLLKELLERSKMNKEK 143

[Close]

BLAST of MELO3C002920 vs. TrEMBL
Match: A5BTC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00850 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 44  PTSLTAPSFSSSSTY-SPFLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQ 103
           P   T   F+   ++ SP L+KSI  AAS+++L+W  PANAGFLSGFSGIESVPGPELPQ
Sbjct: 30  PQKKTQLGFTKKPSWTSPLLQKSIPLAASVAILLWSNPANAGFLSGFSGIESVPGPELPQ 89

Query: 104 IDFLNRFNEENQKKYAEADARFKSSPLLKELLERSKMNKEK 144
           +DFLN+FNEENQKKYAE D RFKSSPLLKELLERSK+N+EK
Sbjct: 90  VDFLNKFNEENQKKYAEFDERFKSSPLLKELLERSKLNQEK 130

[Close]

BLAST of MELO3C002920 vs. TrEMBL
Match: A0A0B0MLQ7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_23083 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-29
Identity = 73/111 (65.77%), Postives = 85/111 (76.58%), Query Frame = 1


Query: 38  SVVGKSPTSLTAPSFSSSSTYSPF----LRKS-IAFAASISLLMWPTPANAGFLSGFSGI 97
           S+        ++ S SSSS Y P     LRKS +  AAS+S+L+ P PA AG LSGF GI
Sbjct: 18  SITSTKILKTSSSSSSSSSCYLPLNCSVLRKSFVPLAASVSILLSPIPAKAGLLSGFPGI 77

Query: 98  ESVPGPELPQIDFLNRFNEENQKKYAEADARFKSSPLLKELLERSKMNKEK 144
           ES+PGP+LP+I+FLNRFNEENQKKYAEADARFKSSPLLK+LLERSK NKEK
Sbjct: 78  ESIPGPQLPEIEFLNRFNEENQKKYAEADARFKSSPLLKQLLERSKQNKEK 128

[Close]

BLAST of MELO3C002920 vs. TrEMBL
Match: B9RCX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1621750 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 76/137 (55.47%), Postives = 92/137 (67.15%), Query Frame = 1


Query: 7   PLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSPFLRKSI 66
           P L     ++P +    +Q+    +NNI               P   SSS     +RKS+
Sbjct: 9   PPLTSSTTKLPITEVPLNQLQIGFNNNI---------------PKVVSSSCQF-IIRKSL 68

Query: 67  AFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEADARFKS 126
            FAAS +LL+  TPA+AGF+SG SG+ESVPGPELPQIDFLN+FNEENQKKYAE DARF+S
Sbjct: 69  PFAASAALLLSATPASAGFMSGISGLESVPGPELPQIDFLNKFNEENQKKYAENDARFQS 128

Query: 127 SPLLKELLERSKMNKEK 144
           SP+LKELLERSK NKEK
Sbjct: 129 SPILKELLERSKQNKEK 129

[Close]

BLAST of MELO3C002920 vs. TrEMBL
Match: I3SYI3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 66/93 (70.97%), Postives = 81/93 (87.10%), Query Frame = 1


Query: 51  SFSSSSTYSPFLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFN 110
           S SS  +Y+  L+KS+  AASI++L+W TPA+AGF+SG SG+ESVPGPELPQIDFL RFN
Sbjct: 40  SLSSHHSYN-ILQKSVPLAASIAILLWSTPAHAGFMSGISGLESVPGPELPQIDFLKRFN 99

Query: 111 EENQKKYAEADARFKSSPLLKELLERSKMNKEK 144
           EENQKKYAE DARFK +PL+K+LLE+SK+NKEK
Sbjct: 100 EENQKKYAENDARFKETPLVKKLLEQSKLNKEK 131

[Close]

BLAST of MELO3C002920 vs. TAIR10
Match: AT2G03420.1 (AT2G03420.1 unknown protein)

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25
Identity = 59/94 (62.77%), Postives = 69/94 (73.40%), Query Frame = 1


Query: 54  SSSTYSPF----LRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRF 113
           SSS  SPF     + +   AAS++LL+ P  A AG +SG  GIESVPGPELP+I+FL+RF
Sbjct: 32  SSSAPSPFHHLLCKSTFPLAASLTLLLSPCTAEAGLMSGSPGIESVPGPELPKIEFLDRF 91

Query: 114 NEENQKKYAEADARFKSSPLLKELLERSKMNKEK 144
           N +NQK YAE DARFK SPLLK+LLE SK+NKEK
Sbjct: 92  NAKNQKFYAENDARFKDSPLLKKLLENSKLNKEK 125

[Close]

BLAST of MELO3C002920 vs. NCBI nr
Match: gi|659131465|ref|XP_008465700.1| (PREDICTED: uncharacterized protein LOC103503323 [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-72
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1


Query: 1   MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP 60
           MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP
Sbjct: 1   MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP 60

Query: 61  FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA 120
           FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA
Sbjct: 61  FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA 120

Query: 121 DARFKSSPLLKELLERSKMNKEK 144
           DARFKSSPLLKELLERSKMNKEK
Sbjct: 121 DARFKSSPLLKELLERSKMNKEK 143

[Close]

BLAST of MELO3C002920 vs. NCBI nr
Match: gi|449452088|ref|XP_004143792.1| (PREDICTED: uncharacterized protein LOC101209452 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-67
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 1


Query: 1   MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP 60
           MASSSLPLLPQPFARIPSSTF SS+ISSNLHNN+RF S+V KSPTSLTAPS SSSSTYSP
Sbjct: 1   MASSSLPLLPQPFARIPSSTFHSSEISSNLHNNVRFTSLVHKSPTSLTAPSSSSSSTYSP 60

Query: 61  FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA 120
            LRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAE 
Sbjct: 61  LLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEF 120

Query: 121 DARFKSSPLLKELLERSKMNKEK 144
           DARFKSSPLLKELLERSKMNKEK
Sbjct: 121 DARFKSSPLLKELLERSKMNKEK 143

[Close]

BLAST of MELO3C002920 vs. NCBI nr
Match: gi|225423543|ref|XP_002272012.1| (PREDICTED: uncharacterized protein LOC100252601 [Vitis vinifera])

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-32
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 44  PTSLTAPSFSSSSTY-SPFLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQ 103
           P   T   F+   ++ SP L+KSI  AAS+++L+W  PANAGFLSGFSGIESVPGPELPQ
Sbjct: 30  PQKKTQLGFTKKPSWTSPLLQKSIPLAASVAILLWSNPANAGFLSGFSGIESVPGPELPQ 89

Query: 104 IDFLNRFNEENQKKYAEADARFKSSPLLKELLERSKMNKEK 144
           +DFLN+FNEENQKKYAE D RFKSSPLLKELLERSK+N+EK
Sbjct: 90  VDFLNKFNEENQKKYAEFDERFKSSPLLKELLERSKLNQEK 130

[Close]

BLAST of MELO3C002920 vs. NCBI nr
Match: gi|1009154070|ref|XP_015894971.1| (PREDICTED: uncharacterized protein LOC107428887 [Ziziphus jujuba])

HSP 1 Score: 146.0 bits (367), Expect = 5.2e-32
Identity = 84/144 (58.33%), Postives = 100/144 (69.44%), Query Frame = 1


Query: 1   MASSSLPLLPQPFARIPSST-FQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYS 60
           M SSS+  L    ++  S T F  S    NL N         K+P +LT  S SSS    
Sbjct: 1   MGSSSVSSLSLTLSQFSSITNFALSGKPYNLSNIFH-----SKTPKALTLSSTSSSHGV- 60

Query: 61  PFLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAE 120
             + KS+  AASI++L+W  PANAGFLSGFSGIESVPGP+LPQ+DFL+R NEENQKKYAE
Sbjct: 61  --ITKSVPLAASIAILLWSNPANAGFLSGFSGIESVPGPQLPQVDFLSRLNEENQKKYAE 120

Query: 121 ADARFKSSPLLKELLERSKMNKEK 144
            DARFKSSP++KELLERSK+NKEK
Sbjct: 121 NDARFKSSPIVKELLERSKLNKEK 136

[Close]

BLAST of MELO3C002920 vs. NCBI nr
Match: gi|502094113|ref|XP_004490142.1| (PREDICTED: uncharacterized protein LOC101496271 [Cicer arietinum])

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30
Identity = 79/143 (55.24%), Postives = 104/143 (72.73%), Query Frame = 1


Query: 1   MASSSLPLLPQPFARIPSSTFQSSQISSNLHNNIRFASVVGKSPTSLTAPSFSSSSTYSP 60
           + SSSLP        I  STF S ++S+  H   +F   + K  T L+    S S +Y+ 
Sbjct: 2   VGSSSLPSF------IHISTF-SDKLSTPPHKKFQFG--ITKRYTHLSCSLSSPSPSYN- 61

Query: 61  FLRKSIAFAASISLLMWPTPANAGFLSGFSGIESVPGPELPQIDFLNRFNEENQKKYAEA 120
            L+KS+  AASI++L+W TPA+AGF+SG SG+ES+PGP+LPQIDFL+R NEENQKKYAE 
Sbjct: 62  VLQKSLPLAASIAILLWSTPAHAGFMSGISGLESIPGPQLPQIDFLSRINEENQKKYAEN 121

Query: 121 DARFKSSPLLKELLERSKMNKEK 144
           DARF+SSPL+K+LLE+SK+NKEK
Sbjct: 122 DARFRSSPLVKKLLEQSKLNKEK 134

The following BLAST results are available for this feature:

BLAST of MELO3C002920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTZ2_CUCSA	1.5e-67	93.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G487730 PE=4 SV=1	[more]
A5BTC6_VITVI	2.1e-32	71.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00850 PE=4 SV=...	[more]
A0A0B0MLQ7_GOSAR	1.3e-29	65.77	Uncharacterized protein OS=Gossypium arboreum GN=F383_23083 PE=4 SV=1	[more]
B9RCX1_RICCO	1.7e-29	55.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1621750 PE=4 SV=1	[more]
I3SYI3_MEDTR	2.9e-29	70.97	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of MELO3C002920 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03420.1	2.9e-25	62.77	unknown protein	[more]

BLAST of MELO3C002920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131465\|ref\|XP_008465700.1\|	1.8e-72	100.00	PREDICTED: uncharacterized protein LOC103503323 [Cucumis melo]	[more]
gi\|449452088\|ref\|XP_004143792.1\|	2.2e-67	93.71	PREDICTED: uncharacterized protein LOC101209452 [Cucumis sativus]	[more]
gi\|225423543\|ref\|XP_002272012.1\|	3.0e-32	71.29	PREDICTED: uncharacterized protein LOC100252601 [Vitis vinifera]	[more]
gi\|1009154070\|ref\|XP_015894971.1\|	5.2e-32	58.33	PREDICTED: uncharacterized protein LOC107428887 [Ziziphus jujuba]	[more]
gi\|502094113\|ref\|XP_004490142.1\|	1.7e-30	55.24	PREDICTED: uncharacterized protein LOC101496271 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45690	melon EST collection version 4.0	transcribed_cluster
MU49068	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002920T3	MELO3C002920T3	mRNA
MELO3C002920T2	MELO3C002920T2	mRNA
MELO3C002920T1	MELO3C002920T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45690	MU45690	transcribed_cluster
MU49068	MU49068	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36730	FAMILY NOT NAMED	coord: 10..188 score: 1.0
None	No IPR available	PANTHER	PTHR36730:SF1	SUBFAMILY NOT NAMED	coord: 10..188 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002920	Csa5G487730	Cucumber (Chinese Long) v2	cumeB361
MELO3C002920	Cla003254	Watermelon (97103) v1	mewmB003
MELO3C002920	ClCG09G020750	Watermelon (Charleston Gray)	mewcgB002
MELO3C002920	Cla97C09G182170	Watermelon (97103) v2	mewmbB038
MELO3C002920	Bhi06G000658	Wax gourd	mewgoB023
MELO3C002920	CSPI05G16560	Wild cucumber (PI 183967)	cpimeB350
MELO3C002920	Cucsa.275380	Cucumber (Gy14) v1	cgymeB460
MELO3C002920	CmoCh05G009320	Cucurbita moschata (Rifu)	cmomeB705
MELO3C002920	Lsi02G017350	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C002920	Cp4.1LG11g07530	Cucurbita pepo (Zucchini)	cpemeB078
MELO3C002920	CsGy5G016390	Cucumber (Gy14) v2	cgybmeB300
MELO3C002920	Carg26439	Silver-seed gourd	carmeB1030
MELO3C002920	CsaV3_5G025620	Cucumber (Chinese Long) v3	cucmeB359

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002920	Cucurbita maxima (Rimu)	cmameB716
MELO3C002920	Cucurbita moschata (Rifu)	cmomeB135
MELO3C002920	Cucurbita pepo (Zucchini)	cpemeB741