MELO3C002812 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002812
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionARM-repeat/Tetratricopeptide repeat-like protein
Locationchr12 : 19120660 .. 19120935 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGATTGGCAAAAGAGAGCTTAATGGATTGCATCATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCTATATCATGCAGCAAGAATGATTAGCAAACAGATGGAAGCAACATGGCTTTTTGCAACATCTAGATTAAAGAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTAACAACAGCAGTGAGAGGAATGGAAACATCATGATCAGAACAACCATGACTATATAA

mRNA sequence

ATGAAAGGATTGGCAAAAGAGAGCTTAATGGATTGCATCATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCTATATCATGCAGCAAGAATGATTAGCAAACAGATGGAAGCAACATGGCTTTTTGCAACATCTAGATTAAAGAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTAACAACAGCAGTGAGAGGAATGGAAACATCATGATCAGAACAACCATGACTATATAA

Coding sequence (CDS)

ATGAAAGGATTGGCAAAAGAGAGCTTAATGGATTGCATCATGTTTGTGAATGGTAGAATGAAGATGGATGAGGGTGCAAATAAGAGAATCAAGATTCTATATCATGCAGCAAGAATGATTAGCAAACAGATGGAAGCAACATGGCTTTTTGCAACATCTAGATTAAAGAAATTGGCTTCAACGACAACAACTCAAGTGAAAAAAGCTGAAGATTCTTCTAACAACAGCAGTGAGAGGAATGGAAACATCATGATCAGAACAACCATGACTATATAA

Protein sequence

MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLASTTTTQVKKAEDSSNNSSERNGNIMIRTTMTI*
Homology
[Close]
BLAST of MELO3C002812 vs. TrEMBL
Match: A0A0A0LL28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354890 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.2e-38
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKKLAS
Sbjct: 514 MKGLAKESLMDCIMFVNGGMKMDEGANKRIKIPYHAARMISKQMEATWLFATARLKKLAS 573

Query: 61  TTTTQVKKAEDSSNNSSERNGNIMIRTTMTI 92
            TTTQVKKAEDSSNNSSERNGN MIRTTMTI
Sbjct: 574 -TTTQVKKAEDSSNNSSERNGNTMIRTTMTI 603

[Close]
BLAST of MELO3C002812 vs. TrEMBL
Match: A5B9D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028488 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-15
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMF+NG +  +    KR+K+ Y AARMISKQMEATWLF+T+R  KL+S
Sbjct: 493 MKGLAKESLMDCIMFINGCINSE--TTKRVKVPYFAARMISKQMEATWLFSTAR-SKLSS 552

Query: 61  TTTTQVKKAED-SSNNSSERNGNIMIRTTM 90
           T   +V++++D     + E+  + M+RT M
Sbjct: 553 TQPNKVQESDDEDEGGNDEQQLDDMMRTMM 579

[Close]
BLAST of MELO3C002812 vs. TrEMBL
Match: F6GZP0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09430 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-15
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMF+NG +  +    KR+K+ Y AARMISKQMEATWLF+T+R  KL+S
Sbjct: 517 MKGLAKESLMDCIMFINGCINSE--TTKRVKVPYFAARMISKQMEATWLFSTAR-SKLSS 576

Query: 61  TTTTQVKKAED-SSNNSSERNGNIMIRTTM 90
           T   +V++++D     + E+  + M+RT M
Sbjct: 577 TQPNKVQESDDEDEGGNDEQQLDDMMRTMM 603

[Close]
BLAST of MELO3C002812 vs. TrEMBL
Match: A0A151TTX7_CAJCA (Tetratricopeptide repeat protein 1 OS=Cajanus cajan GN=KK1_009696 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-14
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKG+AKESLMDCIMF+N  +K   G + R+KI YHAARMISK M+ATWLFAT+RLK    
Sbjct: 498 MKGMAKESLMDCIMFINSCIK--SGDSMRVKIPYHAARMISKHMDATWLFATARLK---- 557

Query: 61  TTTTQVKKAEDSSNNSSERNGNIMIRT 88
                V++ ++ ++    R+  IM+ T
Sbjct: 558 -----VEQIQELNHEEQPRDHKIMVET 573

[Close]
BLAST of MELO3C002812 vs. TrEMBL
Match: A0A067LAX5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16057 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-12
Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMD +MF+NG +  + G  KR+KI Y+AARMISKQM+ATWLFA ++ K+  S
Sbjct: 512 MKGLAKESLMDSLMFLNGCINSETG--KRVKIPYYAARMISKQMDATWLFAGAKSKQ--S 571

Query: 61  TTTTQVKKAEDSSNNSSE 79
           +   QV++ E +SN S +
Sbjct: 572 SKVGQVQELEVNSNYSQK 585

[Close]
BLAST of MELO3C002812 vs. TAIR10
Match: AT5G43120.1 (AT5G43120.1 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein)

HSP 1 Score: 66.6 bits (161), Expect = 9.0e-12
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKL 59
           +KGL++ESLMDCIMFVNGR         R  I Y+AA+MISKQMEATWLF  +R  KL
Sbjct: 512 IKGLSRESLMDCIMFVNGRCF-------RGNIPYYAAQMISKQMEATWLFEKARASKL 562

[Close]
BLAST of MELO3C002812 vs. TAIR10
Match: AT5G10200.1 (AT5G10200.1 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein)

HSP 1 Score: 46.6 bits (109), Expect = 9.6e-06
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEG--ANKRIKILYHAARMISKQMEATWLFATSRLK 57
           M GLAKESL+D I+F+N   + ++   + ++ K+  +A R++ KQM A WLF  + LK
Sbjct: 486 MLGLAKESLLDAILFINECSQSNDPDLSMRQNKVPDYAERLVKKQMRAAWLFKEAALK 543

[Close]
BLAST of MELO3C002812 vs. NCBI nr
Match: gi|659087681|ref|XP_008444580.1| (PREDICTED: uncharacterized protein LOC103487852 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 4.0e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKK+AS
Sbjct: 514 MKGLAKESLMDCIMFVNGGMKMDEGANKRIKIPYHAARMISKQMEATWLFATARLKKMAS 573

Query: 61  TTTTQVKKAEDSSNNSSERNGNIMIRTTMTI 92
            TTTQVKKAEDSSNNSSERNGNIMIRTTMTI
Sbjct: 574 -TTTQVKKAEDSSNNSSERNGNIMIRTTMTI 603

[Close]
BLAST of MELO3C002812 vs. NCBI nr
Match: gi|778671031|ref|XP_004143023.2| (PREDICTED: uncharacterized protein LOC101221149 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 9.0e-38
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMFVNG MKMDEGANKRIKI YHAARMISKQMEATWLFAT+RLKKLAS
Sbjct: 514 MKGLAKESLMDCIMFVNGGMKMDEGANKRIKIPYHAARMISKQMEATWLFATARLKKLAS 573

Query: 61  TTTTQVKKAEDSSNNSSERNGNIMIRTTMTI 92
            TTTQVKKAEDSSNNSSERNGN MIRTTMTI
Sbjct: 574 -TTTQVKKAEDSSNNSSERNGNTMIRTTMTI 603

[Close]
BLAST of MELO3C002812 vs. NCBI nr
Match: gi|147838438|emb|CAN63254.1| (hypothetical protein VITISV_028488 [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMF+NG +  +    KR+K+ Y AARMISKQMEATWLF+T+R  KL+S
Sbjct: 493 MKGLAKESLMDCIMFINGCINSE--TTKRVKVPYFAARMISKQMEATWLFSTAR-SKLSS 552

Query: 61  TTTTQVKKAED-SSNNSSERNGNIMIRTTM 90
           T   +V++++D     + E+  + M+RT M
Sbjct: 553 TQPNKVQESDDEDEGGNDEQQLDDMMRTMM 579

[Close]
BLAST of MELO3C002812 vs. NCBI nr
Match: gi|225458780|ref|XP_002283265.1| (PREDICTED: uncharacterized protein LOC100267728 [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMF+NG +  +    KR+K+ Y AARMISKQMEATWLF+T+R  KL+S
Sbjct: 517 MKGLAKESLMDCIMFINGCINSE--TTKRVKVPYFAARMISKQMEATWLFSTAR-SKLSS 576

Query: 61  TTTTQVKKAED-SSNNSSERNGNIMIRTTM 90
           T   +V++++D     + E+  + M+RT M
Sbjct: 577 TQPNKVQESDDEDEGGNDEQQLDDMMRTMM 603

[Close]
BLAST of MELO3C002812 vs. NCBI nr
Match: gi|302142229|emb|CBI19432.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 1 

Query: 1   MKGLAKESLMDCIMFVNGRMKMDEGANKRIKILYHAARMISKQMEATWLFATSRLKKLAS 60
           MKGLAKESLMDCIMF+NG +  +    KR+K+ Y AARMISKQMEATWLF+T+R  KL+S
Sbjct: 494 MKGLAKESLMDCIMFINGCINSE--TTKRVKVPYFAARMISKQMEATWLFSTAR-SKLSS 553

Query: 61  TTTTQVKKAED-SSNNSSERNGNIMIRTTM 90
           T   +V++++D     + E+  + M+RT M
Sbjct: 554 TQPNKVQESDDEDEGGNDEQQLDDMMRTMM 580

The following BLAST results are available for this feature:
BLAST of MELO3C002812 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL28_CUCSA6.2e-3894.51Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354890 PE=4 SV=1[more]
A5B9D4_VITVI2.6e-1554.44Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028488 PE=4 SV=1[more]
F6GZP0_VITVI2.6e-1554.44Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09430 PE=4 SV=... [more]
A0A151TTX7_CAJCA6.3e-1451.72Tetratricopeptide repeat protein 1 OS=Cajanus cajan GN=KK1_009696 PE=4 SV=1[more]
A0A067LAX5_JATCU2.6e-1256.41Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16057 PE=4 SV=1[more]
BLAST of MELO3C002812 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43120.19.0e-1262.07 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein[more]
AT5G10200.19.6e-0641.38 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein[more]
BLAST of MELO3C002812 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087681|ref|XP_008444580.1|4.0e-3894.51PREDICTED: uncharacterized protein LOC103487852 [Cucumis melo][more]
gi|778671031|ref|XP_004143023.2|9.0e-3894.51PREDICTED: uncharacterized protein LOC101221149 [Cucumis sativus][more]
gi|147838438|emb|CAN63254.1|3.7e-1554.44hypothetical protein VITISV_028488 [Vitis vinifera][more]
gi|225458780|ref|XP_002283265.1|3.7e-1554.44PREDICTED: uncharacterized protein LOC100267728 [Vitis vinifera][more]
gi|302142229|emb|CBI19432.3|3.7e-1554.44unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002812T1MELO3C002812T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002812Wild cucumber (PI 183967)cpimeB014
MELO3C002812Wild cucumber (PI 183967)cpimeB455
MELO3C002812Cucumber (Chinese Long) v2cumeB018
MELO3C002812Watermelon (Charleston Gray)mewcgB145
MELO3C002812Watermelon (Charleston Gray)mewcgB150
MELO3C002812Watermelon (97103) v1mewmB147
MELO3C002812Watermelon (97103) v1mewmB172
MELO3C002812Cucurbita pepo (Zucchini)cpemeB026
MELO3C002812Cucurbita pepo (Zucchini)cpemeB477
MELO3C002812Bottle gourd (USVL1VR-Ls)lsimeB128
MELO3C002812Bottle gourd (USVL1VR-Ls)lsimeB179
MELO3C002812Cucumber (Gy14) v2cgybmeB013
MELO3C002812Cucumber (Gy14) v2cgybmeB399
MELO3C002812Silver-seed gourdcarmeB0400
MELO3C002812Silver-seed gourdcarmeB0430
MELO3C002812Cucumber (Chinese Long) v3cucmeB013
MELO3C002812Cucumber (Chinese Long) v3cucmeB466
MELO3C002812Watermelon (97103) v2mewmbB147
MELO3C002812Watermelon (97103) v2mewmbB154
MELO3C002812Wax gourdmewgoB158
MELO3C002812Wax gourdmewgoB164
MELO3C002812Melon (DHL92) v3.5.1memeB076
MELO3C002812Cucumber (Gy14) v1cgymeB020
MELO3C002812Cucumber (Gy14) v1cgymeB296
MELO3C002812Cucumber (Gy14) v1cgymeB298
MELO3C002812Cucurbita maxima (Rimu)cmameB192
MELO3C002812Cucurbita maxima (Rimu)cmameB364
MELO3C002812Cucurbita maxima (Rimu)cmameB593
MELO3C002812Cucurbita moschata (Rifu)cmomeB179
MELO3C002812Cucurbita moschata (Rifu)cmomeB356
MELO3C002812Cucurbita moschata (Rifu)cmomeB583