MELO3C002528 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002528
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionKinesin-like protein
Locationchr12 : 22240590 .. 22240886 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCCCTCCAACCCAAGGTGGTGGTTCAAGAAATGGTGAAGTTATAGCATTACAAGGAAAACCAATTGTGTGGAGTCCTCTCAAGTTAAGAGGACTGAAAACTTTCAGGAGGCCATCTTTAATACCATCCCGACCTTCATCTCGTCTGAGTTTCAATGACAACATCATCTTCAACTTTCTGTACAACGGTCGTTTCTTCTCTAACATCTCATTCCCATCAAAGAAAGCCATCAGTACTGTTGAGTCCTCTCAAGTTGTGTGCTCGAAACTTGTAGGATGCGCCATTCTTTGA

mRNA sequence

ATGGGAAGCCCTCCAACCCAAGGTGGTGGTTCAAGAAATGGTGAAGTTATAGCATTACAAGGAAAACCAATTGTGTGGAGTCCTCTCAAGTTAAGAGGACTGAAAACTTTCAGGAGGCCATCTTTAATACCATCCCGACCTTCATCTCGTCTGAGTTTCAATGACAACATCATCTTCAACTTTCTGTACAACGGTCGTTTCTTCTCTAACATCTCATTCCCATCAAAGAAAGCCATCAGTACTGTTGAGTCCTCTCAAGTTGTGTGCTCGAAACTTGTAGGATGCGCCATTCTTTGA

Coding sequence (CDS)

ATGGGAAGCCCTCCAACCCAAGGTGGTGGTTCAAGAAATGGTGAAGTTATAGCATTACAAGGAAAACCAATTGTGTGGAGTCCTCTCAAGTTAAGAGGACTGAAAACTTTCAGGAGGCCATCTTTAATACCATCCCGACCTTCATCTCGTCTGAGTTTCAATGACAACATCATCTTCAACTTTCTGTACAACGGTCGTTTCTTCTCTAACATCTCATTCCCATCAAAGAAAGCCATCAGTACTGTTGAGTCCTCTCAAGTTGTGTGCTCGAAACTTGTAGGATGCGCCATTCTTTGA

Protein sequence

MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRLSFNDNIIFNFLYNGRFFSNISFPSKKAISTVESSQVVCSKLVGCAIL*
Homology
[Close]
BLAST of MELO3C002528 vs. TrEMBL
Match: A6YTD6_CUCME (Kinesin-like protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 1 

Query: 1   MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRLSF 54
           MGSPPTQGGGSRNG+VIALQ KPIVWSPLKLRGLKTFRRPSLIPSRPSS   F
Sbjct: 738 MGSPPTQGGGSRNGKVIALQRKPIVWSPLKLRGLKTFRRPSLIPSRPSSTTEF 790

[Close]
BLAST of MELO3C002528 vs. TrEMBL
Match: A0A0A0LLQ4_CUCSA (Kinesin-like protein OS=Cucumis sativus GN=Csa_2G022260 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.5e-18
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1   MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSS 50
           MGSPPTQGGGSRNG+VIALQ KPIVWSPLKLRGLKTFRRPSLIPSRPSS
Sbjct: 742 MGSPPTQGGGSRNGKVIALQRKPIVWSPLKLRGLKTFRRPSLIPSRPSS 790

[Close]
BLAST of MELO3C002528 vs. TrEMBL
Match: W9QQA2_9ROSA (Kinesin-like protein OS=Morus notabilis GN=L484_001175 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-07
Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1 

Query: 1   MGSPPTQGGGSR------NGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRL 52
           MGSPPT   GS        G VIALQ KP+VWSP KLRG+K  RRPSL+ SR S+ +
Sbjct: 759 MGSPPTLAAGSNIPRHHHPGAVIALQRKPLVWSPFKLRGMKPNRRPSLLASRSSTNI 815

[Close]
BLAST of MELO3C002528 vs. TrEMBL
Match: A0A067JL11_JATCU (Kinesin-like protein OS=Jatropha curcas GN=JCGZ_23351 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 1 

Query: 1   MGSPPTQGGG--SRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPS 49
           MGSPPTQ G    ++  V+ALQ K +VWSPLKL+G+K +R+ SL+PSR S
Sbjct: 746 MGSPPTQAGSWKPKHPTVVALQRKSLVWSPLKLKGMKNYRKTSLLPSRHS 795

[Close]
BLAST of MELO3C002528 vs. NCBI nr
Match: gi|150036248|gb|ABR67411.1| (kinesin [Cucumis melo subsp. melo])

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 1 

Query: 1   MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRLSF 54
           MGSPPTQGGGSRNG+VIALQ KPIVWSPLKLRGLKTFRRPSLIPSRPSS   F
Sbjct: 738 MGSPPTQGGGSRNGKVIALQRKPIVWSPLKLRGLKTFRRPSLIPSRPSSTTEF 790

[Close]
BLAST of MELO3C002528 vs. NCBI nr
Match: gi|659070339|ref|XP_008454633.1| (PREDICTED: kinesin-3 [Cucumis melo])

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 1 

Query: 1   MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRLSF 54
           MGSPPTQGGGSRNG+VIALQ KPIVWSPLKLRGLKTFRRPSLIPSRPSS   F
Sbjct: 743 MGSPPTQGGGSRNGKVIALQRKPIVWSPLKLRGLKTFRRPSLIPSRPSSTTEF 795

[Close]
BLAST of MELO3C002528 vs. NCBI nr
Match: gi|778666834|ref|XP_011648822.1| (PREDICTED: kinesin-3 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-18
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1   MGSPPTQGGGSRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSS 50
           MGSPPTQGGGSRNG+VIALQ KPIVWSPLKLRGLKTFRRPSLIPSRPSS
Sbjct: 742 MGSPPTQGGGSRNGKVIALQRKPIVWSPLKLRGLKTFRRPSLIPSRPSS 790

[Close]
BLAST of MELO3C002528 vs. NCBI nr
Match: gi|743829867|ref|XP_011023634.1| (PREDICTED: kinesin-like protein klp-3 [Populus euphratica])

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-08
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 1   MGSPPTQGGG--SRNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSS--RLSF 54
           MGSPPTQ G    ++  V+ALQ K +VWSPLKLR ++  RRPSL+PSRPS+  RLSF
Sbjct: 724 MGSPPTQAGSWKPKHPTVVALQRKSLVWSPLKLRSMQNARRPSLLPSRPSNNERLSF 780

[Close]
BLAST of MELO3C002528 vs. NCBI nr
Match: gi|1009117139|ref|XP_015875155.1| (PREDICTED: kinesin-like protein KIFC3 [Ziziphus jujuba])

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1 

Query: 1   MGSPPTQGGGS--RNGEVIALQGKPIVWSPLKLRGLKTFRRPSLIPSRPSSRL 52
           MGSPP Q   S  R+   IALQ KPI+WSPLKLRG+KT RRPSL+P R S+ L
Sbjct: 721 MGSPPAQIDSSKLRHPAAIALQRKPIIWSPLKLRGMKTNRRPSLLPIRVSTDL 773

The following BLAST results are available for this feature:
BLAST of MELO3C002528 vs. TrEMBL
Match NameE-valueIdentityDescription
A6YTD6_CUCME1.6e-1890.57Kinesin-like protein OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A0A0LLQ4_CUCSA4.5e-1895.92Kinesin-like protein OS=Cucumis sativus GN=Csa_2G022260 PE=3 SV=1[more]
W9QQA2_9ROSA2.8e-0757.89Kinesin-like protein OS=Morus notabilis GN=L484_001175 PE=3 SV=1[more]
A0A067JL11_JATCU1.0e-0658.00Kinesin-like protein OS=Jatropha curcas GN=JCGZ_23351 PE=3 SV=1[more]
BLAST of MELO3C002528 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|150036248|gb|ABR67411.1|2.2e-1890.57kinesin [Cucumis melo subsp. melo][more]
gi|659070339|ref|XP_008454633.1|2.2e-1890.57PREDICTED: kinesin-3 [Cucumis melo][more]
gi|778666834|ref|XP_011648822.1|6.5e-1895.92PREDICTED: kinesin-3 [Cucumis sativus][more]
gi|743829867|ref|XP_011023634.1|2.7e-0861.40PREDICTED: kinesin-like protein klp-3 [Populus euphratica][more]
gi|1009117139|ref|XP_015875155.1|1.8e-0764.15PREDICTED: kinesin-like protein KIFC3 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002528T1MELO3C002528T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002528Silver-seed gourdcarmeB0639
MELO3C002528Silver-seed gourdcarmeB0795
MELO3C002528Silver-seed gourdcarmeB0930
MELO3C002528Cucumber (Chinese Long) v3cucmeB024
MELO3C002528Cucumber (Chinese Long) v3cucmeB464
MELO3C002528Watermelon (97103) v2mewmbB156
MELO3C002528Watermelon (97103) v2mewmbB140
MELO3C002528Wax gourdmewgoB156
MELO3C002528Melon (DHL92) v3.5.1memeB075
MELO3C002528Melon (DHL92) v3.5.1memeB064
MELO3C002528Melon (DHL92) v3.5.1memeB073
MELO3C002528Cucumber (Gy14) v1cgymeB019
MELO3C002528Cucumber (Gy14) v1cgymeB198
MELO3C002528Cucurbita maxima (Rimu)cmameB013
MELO3C002528Cucurbita maxima (Rimu)cmameB192
MELO3C002528Cucurbita maxima (Rimu)cmameB364
MELO3C002528Cucurbita maxima (Rimu)cmameB393
MELO3C002528Cucurbita maxima (Rimu)cmameB591
MELO3C002528Cucurbita maxima (Rimu)cmameB782
MELO3C002528Cucurbita moschata (Rifu)cmomeB179
MELO3C002528Cucurbita moschata (Rifu)cmomeB356
MELO3C002528Cucurbita moschata (Rifu)cmomeB384
MELO3C002528Cucurbita moschata (Rifu)cmomeB581
MELO3C002528Wild cucumber (PI 183967)cpimeB022
MELO3C002528Wild cucumber (PI 183967)cpimeB024
MELO3C002528Wild cucumber (PI 183967)cpimeB453
MELO3C002528Cucumber (Chinese Long) v2cumeB027
MELO3C002528Cucumber (Chinese Long) v2cumeB458
MELO3C002528Cucumber (Chinese Long) v2cumeB518
MELO3C002528Watermelon (Charleston Gray)mewcgB138
MELO3C002528Watermelon (Charleston Gray)mewcgB146
MELO3C002528Watermelon (Charleston Gray)mewcgB152
MELO3C002528Watermelon (97103) v1mewmB149
MELO3C002528Watermelon (97103) v1mewmB151
MELO3C002528Watermelon (97103) v1mewmB167
MELO3C002528Watermelon (97103) v1mewmB177
MELO3C002528Cucurbita pepo (Zucchini)cpemeB026
MELO3C002528Cucurbita pepo (Zucchini)cpemeB049
MELO3C002528Cucurbita pepo (Zucchini)cpemeB216
MELO3C002528Cucurbita pepo (Zucchini)cpemeB438
MELO3C002528Cucurbita pepo (Zucchini)cpemeB477
MELO3C002528Bottle gourd (USVL1VR-Ls)lsimeB090
MELO3C002528Bottle gourd (USVL1VR-Ls)lsimeB127
MELO3C002528Bottle gourd (USVL1VR-Ls)lsimeB183
MELO3C002528Bottle gourd (USVL1VR-Ls)lsimeB179
MELO3C002528Bottle gourd (USVL1VR-Ls)lsimeB290
MELO3C002528Cucumber (Gy14) v2cgybmeB022
MELO3C002528Cucumber (Gy14) v2cgybmeB156
MELO3C002528Cucumber (Gy14) v2cgybmeB397