MELO3C002413.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C002413.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAnkyrin repeat family protein
Locationchr12 : 24184515 .. 24185403 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATACAGCCCTTTTGTTTTGCTGCTGCATCAGGAGTTGTAAGAATTGCTGAATTAATGGTTGAAAAGAATCAAGATCTTCCACTTATCCGTGGCTTCAACAATGCTGTCACCCCACTTTTCATAGCTGTCTCAAATAAATGTACAGAAATGGTTCCCTATCTCTTGTCTATCACTGATCTTGATCAACTAGACTACCAAGAAGAGAATGAGCTTCTCATTGCCACCATACATAGGGACTTTTATGGTAAATATCAATCTCCCTTGAATTTGCATTTCTGTCTTTTGATCCATAAACTTTAGTACGTATTAGAATTGGAAGAAACTTTTGGAGGTTGAAAGTAATTTGAAAAATAGATTTTAGATAGAAATTACTTATAGTGTACTGATCACTTCTAGTTCTTTTGACTTGACGCAAATTCTAAGATATATATCACTCATGCTATTTGTATCTAGTTGACATCTCTAAATTTTATATATGGCCACCTATCCTAATTATCAAAGTTGTTTTATATTAGATCCTTCACTTGTTAAAATTTATTAACATTACCAAGCCTACTACCAGACACAAAATTGAAAATGCGAGAGTAGATTAACTTCATTAGATAAACAATATGAAAATTCAAAACTAATTGGAAAAGGAGAGCAATAACTGATCATCTACCTGAATTTGAGATTCCATTTTTCTCGATGTGGAAATCTAAACAAATGATATTTGGCCTTTCACTTAGATATAAGTTTGTGGATTCTGCAAAGATATCCATATTTAGCAATAATGAAGGACACGAATGAAGAGACAGCATTGCATGTGATGGCCAGAAAACCATCTGCCATGGATGTCACGAAGCAGCTAAGCAGTTGGACATTATTCATCGACTCAACTTAG

mRNA sequence

ATGGAAATACAGCCCTTTTGTTTTGCTGCTGCATCAGGAGTTGTAAGAATTGCTGAATTAATGGTTGAAAAGAATCAAGATCTTCCACTTATCCGTGGCTTCAACAATGCTGTCACCCCACTTTTCATAGCTGTCTCAAATAAATGTACAGAAATGGTTCCCTATCTCTTGTCTATCACTGATCTTGATCAACTAGACTACCAAGAAGAGAATGAGCTTCTCATTGCCACCATACATAGGGACTTTTATGATATAAGTTTGTGGATTCTGCAAAGATATCCATATTTAGCAATAATGAAGGACACGAATGAAGAGACAGCATTGCATGTGATGGCCAGAAAACCATCTGCCATGGATGTCACGAAGCAGCTAAGCAGTTGGACATTATTCATCGACTCAACTTAG

Coding sequence (CDS)

ATGGAAATACAGCCCTTTTGTTTTGCTGCTGCATCAGGAGTTGTAAGAATTGCTGAATTAATGGTTGAAAAGAATCAAGATCTTCCACTTATCCGTGGCTTCAACAATGCTGTCACCCCACTTTTCATAGCTGTCTCAAATAAATGTACAGAAATGGTTCCCTATCTCTTGTCTATCACTGATCTTGATCAACTAGACTACCAAGAAGAGAATGAGCTTCTCATTGCCACCATACATAGGGACTTTTATGATATAAGTTTGTGGATTCTGCAAAGATATCCATATTTAGCAATAATGAAGGACACGAATGAAGAGACAGCATTGCATGTGATGGCCAGAAAACCATCTGCCATGGATGTCACGAAGCAGCTAAGCAGTTGGACATTATTCATCGACTCAACTTAG

Protein sequence

MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLDYQEENELLIATIHRDFYDISLWILQRYPYLAIMKDTNEETALHVMARKPSAMDVTKQLSSWTLFIDST
BLAST of MELO3C002413.2 vs. NCBI nr
Match: XP_011652468.1 (PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus] >KGN64473.1 hypothetical protein Csa_1G058080 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAAASGVVRIAELMVEKN +LPLIRGFNNAVTPLFIAVS KCTEMV YLLS+TDL+QL 
Sbjct: 150 CFAAASGVVRIAELMVEKNPNLPLIRGFNNAVTPLFIAVSYKCTEMVSYLLSVTDLNQLG 209

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDTNEETALHVMARKPSAMDVTKQLSS 126
            QE+ ELLIATI  DFYDISLWILQRYPYLAIM+DTNEETALHV+ARKPSAMDVTKQLSS
Sbjct: 210 KQEQIELLIATIQSDFYDISLWILQRYPYLAIMRDTNEETALHVIARKPSAMDVTKQLSS 269

Query: 127 WTLFIDS 134
           WTLF++S
Sbjct: 270 WTLFLNS 276

BLAST of MELO3C002413.2 vs. NCBI nr
Match: XP_011652476.1 (PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAAASGVVRIAELMVEKN +LPLIRGFNNAVTPLFIAVS KCTEMV YLLS+TDL+QL 
Sbjct: 150 CFAAASGVVRIAELMVEKNPNLPLIRGFNNAVTPLFIAVSYKCTEMVSYLLSVTDLNQLG 209

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDTNEETALHVMARKPSAMDVTKQLSS 126
            QE+ ELLIATI  DFYDISLWILQRYPYLAIM+DTNEETALHV+ARKPSAMDVTKQLSS
Sbjct: 210 KQEQIELLIATIQSDFYDISLWILQRYPYLAIMRDTNEETALHVIARKPSAMDVTKQLSS 269

Query: 127 WTLFIDS 134
           WTLF++S
Sbjct: 270 WTLFLNS 276

BLAST of MELO3C002413.2 vs. NCBI nr
Match: XP_016898889.1 (PREDICTED: uncharacterized protein LOC103484963 [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT 60
          MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT
Sbjct: 1  MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT 60

Query: 61 DLDQLDYQEENELLIATIHRDFY 84
          DLDQLDYQEENELLIATIHRDFY
Sbjct: 61 DLDQLDYQEENELLIATIHRDFY 83

BLAST of MELO3C002413.2 vs. NCBI nr
Match: XP_008440631.1 (PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 3.3e-37
Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAA S +V+IA+LMVEKN +LPLIR F    TPL IAVS K  +M+ YLLS+TDL QL 
Sbjct: 142 CFAATSRIVKIAKLMVEKNHELPLIRTFREG-TPLLIAVSYKSRDMISYLLSVTDLSQLT 201

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDT--NEETALHVMARKPSAMDVTKQL 126
            QE  ELLIATIH DF+D+SLWIL+ YP LA+MKDT  N ETALHV+ARKPSAMD TKQL
Sbjct: 202 AQERIELLIATIHSDFHDLSLWILKLYPELAVMKDTKNNNETALHVLARKPSAMDSTKQL 261

Query: 127 SSWTLFIDS 134
            +W + I+S
Sbjct: 262 QNWKMRINS 269

BLAST of MELO3C002413.2 vs. NCBI nr
Match: XP_008440640.1 (PREDICTED: uncharacterized protein LOC103484989 isoform X2 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 3.3e-37
Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAA S +V+IA+LMVEKN +LPLIR F    TPL IAVS K  +M+ YLLS+TDL QL 
Sbjct: 77  CFAATSRIVKIAKLMVEKNHELPLIRTFREG-TPLLIAVSYKSRDMISYLLSVTDLSQLT 136

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDT--NEETALHVMARKPSAMDVTKQL 126
            QE  ELLIATIH DF+D+SLWIL+ YP LA+MKDT  N ETALHV+ARKPSAMD TKQL
Sbjct: 137 AQERIELLIATIHSDFHDLSLWILKLYPELAVMKDTKNNNETALHVLARKPSAMDSTKQL 196

Query: 127 SSWTLFIDS 134
            +W + I+S
Sbjct: 197 QNWKMRINS 204

BLAST of MELO3C002413.2 vs. TAIR10
Match: AT3G54070.1 (Ankyrin repeat family protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12
Identity = 52/141 (36.88%), Postives = 72/141 (51.06%), Query Frame = 0

Query: 5   PFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQ 64
           P  FAAA G +  AE+++   +DLP I      +TP+ IA      EMV YL S T +  
Sbjct: 123 PLSFAAALGDIETAEMLINMIRDLPDISN-EKTMTPIHIAALYGHGEMVQYLFSKTSIKD 182

Query: 65  LDYQEENELLIATIHRDFY----DISLWILQRYPY----LAIMKDTNEETALHVMARKPS 124
           L+ Q+   L    I  D Y    D+ LW+L+R       LA+  ++N+  ALH++ARK S
Sbjct: 183 LNDQQYLNLFHTMISADIYGVFADVPLWMLERVDLYRKELALYPNSNK--ALHLLARKTS 242

Query: 125 AMDVTKQL-------SSWTLF 131
           A+    QL       SSW LF
Sbjct: 243 AISHKSQLNLFQQVASSWLLF 260

BLAST of MELO3C002413.2 vs. TAIR10
Match: AT5G35830.1 (Ankyrin repeat family protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-10
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAAASGVV IA++++EKN+DLP+IRG     TP+ +A      EMV YL   T   + +
Sbjct: 162 CFAAASGVVEIAKMLIEKNKDLPMIRG-GGKTTPIHMAALFGHGEMVKYLYKNTRFREFN 221

Query: 67  YQEENELLIATIHRDFY 84
            +E   L  A I  D Y
Sbjct: 222 DEEFVNLFHAVISADIY 237

BLAST of MELO3C002413.2 vs. TAIR10
Match: AT3G18670.1 (Ankyrin repeat family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09
Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 0

Query: 8   FAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLS---ITDLDQ 67
           +AA  G+VRIAE +V K   L  +R     + P+ +A       +V YL S   ++DLD 
Sbjct: 127 YAATGGIVRIAECLVNKCPGLVSVRNAKEHI-PIVVASLYGHKHLVQYLYSHTPLSDLDP 186

Query: 68  LDYQEENE------LLIATIHRDFYDISLWILQRYPYLAIMKDTNEETALHVMARKPSA 118
            D  +E++      L+   I    Y I+L ++QRYP LA  +D++ +TA+  +A+ P A
Sbjct: 187 CDDSDEHKGKNGAMLVTNCIVDGLYCIALDLIQRYPKLAYTRDSDNDTAIMALAQTPYA 244

BLAST of MELO3C002413.2 vs. TrEMBL
Match: tr|A0A0A0LRT6|A0A0A0LRT6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAAASGVVRIAELMVEKN +LPLIRGFNNAVTPLFIAVS KCTEMV YLLS+TDL+QL 
Sbjct: 150 CFAAASGVVRIAELMVEKNPNLPLIRGFNNAVTPLFIAVSYKCTEMVSYLLSVTDLNQLG 209

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDTNEETALHVMARKPSAMDVTKQLSS 126
            QE+ ELLIATI  DFYDISLWILQRYPYLAIM+DTNEETALHV+ARKPSAMDVTKQLSS
Sbjct: 210 KQEQIELLIATIQSDFYDISLWILQRYPYLAIMRDTNEETALHVIARKPSAMDVTKQLSS 269

Query: 127 WTLFIDS 134
           WTLF++S
Sbjct: 270 WTLFLNS 276

BLAST of MELO3C002413.2 vs. TrEMBL
Match: tr|A0A1S4DSC8|A0A1S4DSC8_CUCME (uncharacterized protein LOC103484963 OS=Cucumis melo OX=3656 GN=LOC103484963 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.8e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT 60
          MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT
Sbjct: 1  MEIQPFCFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSIT 60

Query: 61 DLDQLDYQEENELLIATIHRDFY 84
          DLDQLDYQEENELLIATIHRDFY
Sbjct: 61 DLDQLDYQEENELLIATIHRDFY 83

BLAST of MELO3C002413.2 vs. TrEMBL
Match: tr|A0A1S3B146|A0A1S3B146_CUCME (uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484989 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAA S +V+IA+LMVEKN +LPLIR F    TPL IAVS K  +M+ YLLS+TDL QL 
Sbjct: 142 CFAATSRIVKIAKLMVEKNHELPLIRTFREG-TPLLIAVSYKSRDMISYLLSVTDLSQLT 201

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDT--NEETALHVMARKPSAMDVTKQL 126
            QE  ELLIATIH DF+D+SLWIL+ YP LA+MKDT  N ETALHV+ARKPSAMD TKQL
Sbjct: 202 AQERIELLIATIHSDFHDLSLWILKLYPELAVMKDTKNNNETALHVLARKPSAMDSTKQL 261

Query: 127 SSWTLFIDS 134
            +W + I+S
Sbjct: 262 QNWKMRINS 269

BLAST of MELO3C002413.2 vs. TrEMBL
Match: tr|A0A1S3B1K1|A0A1S3B1K1_CUCME (uncharacterized protein LOC103484989 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484989 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAA S +V+IA+LMVEKN +LPLIR F    TPL IAVS K  +M+ YLLS+TDL QL 
Sbjct: 77  CFAATSRIVKIAKLMVEKNHELPLIRTFREG-TPLLIAVSYKSRDMISYLLSVTDLSQLT 136

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDT--NEETALHVMARKPSAMDVTKQL 126
            QE  ELLIATIH DF+D+SLWIL+ YP LA+MKDT  N ETALHV+ARKPSAMD TKQL
Sbjct: 137 AQERIELLIATIHSDFHDLSLWILKLYPELAVMKDTKNNNETALHVLARKPSAMDSTKQL 196

Query: 127 SSWTLFIDS 134
            +W + I+S
Sbjct: 197 QNWKMRINS 204

BLAST of MELO3C002413.2 vs. TrEMBL
Match: tr|A0A1S3CUB2|A0A1S3CUB2_CUCME (uncharacterized protein LOC103504614 OS=Cucumis melo OX=3656 GN=LOC103504614 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.8e-35
Identity = 88/129 (68.22%), Postives = 98/129 (75.97%), Query Frame = 0

Query: 7   CFAAASGVVRIAELMVEKNQDLPLIRGFNNAVTPLFIAVSNKCTEMVPYLLSITDLDQLD 66
           CFAAASGVVRIAELMVEKN+DLPLIRGF N VTPLF+AVS KC  M  YLLS+T L +L 
Sbjct: 98  CFAAASGVVRIAELMVEKNEDLPLIRGFGN-VTPLFMAVSYKCKPMALYLLSVTKLTELT 157

Query: 67  YQEENELLIATIHRDFYDISLWILQRYPYLAIMKDT--NEETALHVMARKPSAMDVTKQL 126
            QE+ ELLIATIH DF+DISL IL+    LA   DT  N ETALHVMARKPSA+D   QL
Sbjct: 158 SQEKIELLIATIHSDFFDISLEILEHDTTLATKNDTKNNNETALHVMARKPSAIDSGDQL 217

Query: 127 SSWTLFIDS 134
           + W   I+S
Sbjct: 218 NFWKNCINS 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011652468.11.8e-5487.40PREDICTED: uncharacterized protein LOC101218503 isoform X1 [Cucumis sativus] >KG... [more]
XP_011652476.11.8e-5487.40PREDICTED: uncharacterized protein LOC101218503 isoform X2 [Cucumis sativus][more]
XP_016898889.11.0e-38100.00PREDICTED: uncharacterized protein LOC103484963 [Cucumis melo][more]
XP_008440631.13.3e-3766.67PREDICTED: uncharacterized protein LOC103484989 isoform X1 [Cucumis melo][more]
XP_008440640.13.3e-3766.67PREDICTED: uncharacterized protein LOC103484989 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G54070.11.5e-1236.88Ankyrin repeat family protein[more]
AT5G35830.13.2e-1045.45Ankyrin repeat family protein[more]
AT3G18670.12.7e-0933.61Ankyrin repeat family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LRT6|A0A0A0LRT6_CUCSA1.2e-5487.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058080 PE=4 SV=1[more]
tr|A0A1S4DSC8|A0A1S4DSC8_CUCME6.8e-39100.00uncharacterized protein LOC103484963 OS=Cucumis melo OX=3656 GN=LOC103484963 PE=... [more]
tr|A0A1S3B146|A0A1S3B146_CUCME2.2e-3766.67uncharacterized protein LOC103484989 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3B1K1|A0A1S3B1K1_CUCME2.2e-3766.67uncharacterized protein LOC103484989 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CUB2|A0A1S3CUB2_CUCME7.8e-3568.22uncharacterized protein LOC103504614 OS=Cucumis melo OX=3656 GN=LOC103504614 PE=... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002413.2.1MELO3C002413.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3DG3DSA:1.25.40.20coord: 2..128
e-value: 7.4E-10
score: 40.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILYSSF48403Ankyrin repeatcoord: 4..124
NoneNo IPR availablePANTHERPTHR24177FAMILY NOT NAMEDcoord: 4..121
NoneNo IPR availablePANTHERPTHR24177:SF33ANKYRIN REPEAT FAMILY PROTEIN-RELATEDcoord: 4..121
IPR020683Ankyrin repeat-containing domainCDDcd00204ANKcoord: 5..114
e-value: 2.78983E-8
score: 46.6078

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None