MELO3C001937 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C001937
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA polymerase epsilon subunit 2
Locationchr12 : 26190488 .. 26192203 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCACGCAGTCGCCCCATCTTCTTCAATCTTCAGTTCAGCTTCCTCTCCGCCGGTCCTTATAGTCGGCCGCCCACCTCTCCGCTCGCCCTTCAAGCCGGCCGCTTCCTCTCCCCCGCCGGCCCTTACCTTTCCGCTCGCCCTTCAAGCCGGCCGCACCCTCTCCGCCGGTGTCCAGTTGCTCGCACCTCAAGCCAGCCGCCCCCCTCTCCAACTCTGTCCAGTCGCTTGCCCTTGATACCGCTCGTCTTTCATAATGTTGTCCGCCCTCCCTTCCTTCCTGTCGTCCGCCTTCCCGCCAACACTTCGAATTTGGTGTTGAATTTGTTTTCTGCTTACACTTGTAAGTTAAATATTTTGACTTCGTTAAAATTTGTTGAATTTGTTGTGATGAAATTGTTCGAGTAAAAATTTATTTTCAAACTCCAAAAGCCGTGCTTGAATCCCAAAACAATTAACTAAAAATTTAGTTTCAGGTAAACTATATTTATTGTCAACTTAAAATATATACCAAACAATCTAGAGATAGAAGTCAGAGAATGGACGCATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGCTTTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTCGTTTCCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTTGACGATCTCCATGAAGAATCTTGTACTGTTTCTTCTTCTTTCATACTACATTTATATCTTCTCTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGTCTATTATGGCAGTGAAATCTCCAATATTAGAAAAGGATGGGGTGCATCGGGTTATCAGCAAACTGCTTGCAGCTGAAGAAGCGGAAGAAGCAAGTCCCAATACCATTACCAGTACAACTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCATCGGTATGGTTTTCTCCCATTTATATTTATTTTTAATAGTTGTTAAACTAAGCATTCCTGCTTAAGCATATACCTTGGGCCCAGAAGTCAGAGCAAAATCTCTCATTCCCATGTGTTGTTGAATACTTGAACTAAAAAAAACTACTAGTTGGATTTTTGGGATAATTAGACGCGGATAACTGATGGAGCTCGTTGCAAAAAAGAGAGATATAATGGATTTAACTGAGAACTATCGTCGTCAACATTCCTTTTCTCTGCACTTGAAATCACCTGTTCTTGAACCTTGTATACATATATATTTTTAGGCACACAGGGGACCTTCCTATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTGTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGGTGCTCCATTTCTCTTGACCCATGAATTGATCATGTTAGCCTTTACAATTGAACATGAGCATTTACACTAATTTTGTTTGTGATGTGTTTCCCAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAAATGGAAGATGGCCATTTTTACTTGGAAGACCTTACTGCATCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAGTCTGAACTTGTTTGA

mRNA sequence

CGCACGCAGTCGCCCCATCTTCTTCAATCTTCAGTTCAGCTTCCTCTCCGCCGGTCCTTATAGTCGGCCGCCCACCTCTCCGCTCGCCCTTCAAGCCGGCCGCTTCCTCTCCCCCGCCGGCCCTTACCTTTCCGCTCGCCCTTCAAGCCGGCCGCACCCTCTCCGCCGGTGTCCAGTTGCTCGCACCTCAAGCCAGCCGCCCCCCTCTCCAACTCTGTCCAGTCGCTTGCCCTTGATACCGCTCGTCTTTCATAATGTTGTCCGCCCTCCCTTCCTTCCTGTCGTCCGCCTTCCCGCCAACACTTCGAATTTGGTGTTGAATTTGTTTTCTGCTTACACTTTTTCAGGTAAACTATATTTATTGTCAACTTAAAATATATACCAAACAATCTAGAGATAGAAGTCAGAGAATGGACGCATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGCTTTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTCGTTTCCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTTGACGATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGAAAAGGATGGGGTGCATCGGGTTATCAGCAAACTGCTTGCAGCTGAAGAAGCGGAAGAAGCAAGTCCCAATACCATTACCAGTACAACTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCATCGGCACACAGGGGACCTTCCTATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTGTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAAATGGAAGATGGCCATTTTTACTTGGAAGACCTTACTGCATCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAGTCTGAACTTGTTTGA

Coding sequence (CDS)

ATGGACGCATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGCTTTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTCGTTTCCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTTGACGATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGAAAAGGATGGGGTGCATCGGGTTATCAGCAAACTGCTTGCAGCTGAAGAAGCGGAAGAAGCAAGTCCCAATACCATTACCAGTACAACTGCTCTTTGCATCATCGACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCATCGGCACACAGGGGACCTTCCTATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTGTCCCAAAGGCTCTCCCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAAATGGAAGATGGCCATTTTTACTTGGAAGACCTTACTGCATCTGTGGAAATTAATTTATCTAATGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAGTCTGAACTTGTTTGA

Protein sequence

MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYDVEKSELV*
Homology
[Close]
BLAST of MELO3C001937 vs. Swiss-Prot
Match: DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.3e-57
Identity = 122/213 (57.28%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFED-DAIELVLDDLHEESLKSPILEKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +F   +D +AI+L+LD+L +E+ KS  ++ +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  GVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHG 126
            V  +I++LL A  A E      TS ++L IIDAF + KF YD +KK F+ HT  LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPE---EPTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           VISQ+EDGHFYLEDL+ASVEI+LS A   TG F
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFF 215

[Close]
BLAST of MELO3C001937 vs. Swiss-Prot
Match: DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-19
Identity = 66/207 (31.88%), Postives = 113/207 (54.59%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEK-D 66
           +K++ +   + G +SIK +A+  I++ +    G++   I  ++D+L +   KS  L+  +
Sbjct: 6   KKQITKSFSLTG-FSIKADAMKCIINRIKN-EGYD---ITQLIDNLLKNLDKSQYLQTIE 65

Query: 67  GVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTG-DLPIH 126
           G  ++I  + +++  E+          AL +IDAF+   F +D   K F +    D  +H
Sbjct: 66  GCFKLIDTINSSDAIEKE---------ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLH 125

Query: 127 GDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVM 186
           G + +K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+
Sbjct: 126 GSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQTITPLSSLLGNTGRKHVL 185

Query: 187 GVISQMEDGHFYLEDLTASVEINLSNA 212
           G ISQ+E+  FY+EDL  +V+I++S A
Sbjct: 186 GTISQIEEDQFYIEDLNTNVKIDISKA 198

[Close]
BLAST of MELO3C001937 vs. Swiss-Prot
Match: DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-15
Identity = 66/221 (29.86%), Postives = 113/221 (51.13%), Query Frame = 1 

Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFE-DDAIELVLDDLHEESLKSPILEK 65
           LR +     K+RGL  ++ EA+  +   +   +  E +DA+E ++D + ++ L S ++E+
Sbjct: 6   LRSRALSAFKLRGLM-LRGEAVKYLTEALQSINEIELEDALEKIIDAVEKQPLSSNMIER 65

Query: 66  DGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIF-----HRHTG 125
             V        A +E  ++   TI       II AFDI +F Y+  +K F       H  
Sbjct: 66  SVVEA------AVQECSQSVDETIDHI--FNIIGAFDIPRFVYNSERKKFLPLLMTNHPA 125

Query: 126 DLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT 185
              + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T
Sbjct: 126 P-NLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 185

Query: 186 ---GRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTG 217
              G   V+G+I+Q+++G F+LED T +++++LS A   +G
Sbjct: 186 SKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSG 216

[Close]
BLAST of MELO3C001937 vs. Swiss-Prot
Match: DPOE2_CHICK (DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-14
Identity = 65/228 (28.51%), Postives = 119/228 (52.19%), Query Frame = 1 

Query: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFE-DDAIELVLDDLHEESLKS 60
           M+   LR+++    ++RGL  ++ EA+  +   +   +  E +D I+ ++D + ++ L +
Sbjct: 1   MEPERLRRRLGSAFRVRGLL-LRAEAVKYLTETLESLNEEEFEDVIDKIIDAVEKQPLST 60

Query: 61  PILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIF-HRHT 120
            ++E   V        A +E  +A   TI +     II AFDI ++ Y+P +K F     
Sbjct: 61  NMIELSTVEA------AVQECSQALDETIKNV--FNIIGAFDIPRYIYNPDRKRFVPLSM 120

Query: 121 GDLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPI 180
            +LP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  +
Sbjct: 121 TNLPVPNLFGTARDKAELFRERYSILQQRTHRHELFTPAAVVIHPDDNRSKF---QLKTV 180

Query: 181 QSLVGQTGRKW---VMGVISQMEDGHFYLEDLTASVEINLSNAISFTG 217
           ++L+G T +     V+G+I+Q+++G ++LED T  V+++LS A   +G
Sbjct: 181 ETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVVQLDLSKAQFHSG 216

[Close]
BLAST of MELO3C001937 vs. Swiss-Prot
Match: DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 64/221 (28.96%), Postives = 109/221 (49.32%), Query Frame = 1 

Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFE-DDAIELVLDDLHEESLKSPILEK 65
           LR +     K+RGL  ++ EA   +   +      E ++ +  ++D + ++ L S ++E+
Sbjct: 6   LRSRTVSAFKLRGLL-LRSEATKYLTEALQSVTELELEENLGKIIDAVEKQPLSSNMIER 65

Query: 66  DGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIF-----HRHTG 125
             V        A +E  ++   TI       II AFDI +F Y+  +K F       H  
Sbjct: 66  SVVEA------AVQECSQSMDETIEHV--FNIIGAFDIPRFIYNSERKKFLPLSMTNHAA 125

Query: 126 DLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT 185
              + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++  I++L+G T
Sbjct: 126 PT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGST 185

Query: 186 ---GRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTG 217
              G   V+G+I+Q+++G F+LED T +V+++LS A   +G
Sbjct: 186 SKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG 216

[Close]
BLAST of MELO3C001937 vs. TrEMBL
Match: A0A0A0LUV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434690 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-107
Identity = 203/227 (89.43%), Postives = 214/227 (94.27%), Query Frame = 1 

Query: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF  HT +
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120

Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYDVEKSELV 228
           KWVMGVISQMEDGHFYLEDLTASVEINLS+AISFTGNFYDVEKSELV
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 226

[Close]
BLAST of MELO3C001937 vs. TrEMBL
Match: A5AMH8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038180 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 4.8e-79
Identity = 154/209 (73.68%), Postives = 181/209 (86.60%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDG 66
           RKKVQRK KIRG Y++K+EALDEI+SF+S F   ED+AI+L+LD+L  ESLKS IL+K+ 
Sbjct: 6   RKKVQRKFKIRG-YTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKES 65

Query: 67  VHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGD 126
           VHRV+S LL AE A E +P  I++ +AL I+DAF +SKF YDPIKKIF+ +TG L IHGD
Sbjct: 66  VHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGD 125

Query: 127 APAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           A AK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+GQTG++WVMGV
Sbjct: 126 ASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGV 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSNAISFT 216
           ISQ+EDGHF+LEDLTASVEINLSNAISFT
Sbjct: 186 ISQLEDGHFFLEDLTASVEINLSNAISFT 213

[Close]
BLAST of MELO3C001937 vs. TrEMBL
Match: A0A059AW13_EUCGR (DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.0e-73
Identity = 145/215 (67.44%), Postives = 176/215 (81.86%), Query Frame = 1 

Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKD 65
           ++KKVQRK K+RG Y+++++ALD ++SF SRF G EDDA++L+LD L  ESLKS I++KD
Sbjct: 5   MKKKVQRKFKMRG-YTLRVDALDAVLSFASRFAGAEDDALDLLLDQLDHESLKSSIIDKD 64

Query: 66  GVHRVISKLLAAEEAEEASPNTITST--TALCIIDAFDISKFRYDPIKKIFHRHTGDLPI 125
            V+RV+S LL AE A E SP+       +AL +IDAF + KFRYDP+KKIF+ HTG LPI
Sbjct: 65  PVNRVVSLLLEAEAAVEESPDAACEGRGSALRVIDAFLVPKFRYDPVKKIFYEHTGSLPI 124

Query: 126 HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWV 185
           HG+A AKA LY+DRFLLL QRLSRDQHF+KPAF+   + FGSCEISPIQSLVGQTGR+WV
Sbjct: 125 HGEASAKAKLYKDRFLLLYQRLSRDQHFAKPAFETETTEFGSCEISPIQSLVGQTGRRWV 184

Query: 186 MGVISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           MGVISQ+EDGHFYLEDLTASVEINLS+A   TG F
Sbjct: 185 MGVISQLEDGHFYLEDLTASVEINLSDAKVTTGFF 218

[Close]
BLAST of MELO3C001937 vs. TrEMBL
Match: D7SIP4_VITVI (DNA polymerase epsilon subunit 2 OS=Vitis vinifera GN=VIT_17s0000g04830 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.7e-73
Identity = 145/213 (68.08%), Postives = 175/213 (82.16%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDG 66
           RKKVQRK KIRG Y++K+EALDEI+SF+S F   ED+AI+L+LD+L  ESLKS IL+K+ 
Sbjct: 6   RKKVQRKFKIRG-YTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKES 65

Query: 67  VHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGD 126
           VHRV+S LL AE A E +P  I++ +AL I+DAF +SKF YDPIKKIF+ +TG L IHGD
Sbjct: 66  VHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGD 125

Query: 127 APAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           A AK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+GQTG++WVMGV
Sbjct: 126 ASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGV 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSNAISFTGNFY 220
           ISQ+EDGHF+LEDLTAS+ + L      T  F+
Sbjct: 186 ISQLEDGHFFLEDLTASLAL-LHQQYKITTGFF 216

[Close]
BLAST of MELO3C001937 vs. TrEMBL
Match: A0A161ZS40_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023267 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-72
Identity = 141/212 (66.51%), Postives = 175/212 (82.55%), Query Frame = 1 

Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKD 65
           +RK +Q+K K+RG Y++K+EAL+EI+ F+S+F   ED+A++L+LD+L  +SLKS IL+K+
Sbjct: 5   MRKLIQKKFKMRG-YTLKVEALNEILPFLSKFKDAEDEALDLLLDELQHQSLKSSILDKE 64

Query: 66  GVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHG 125
            V RV+S LL AE A E +P + ++T AL IIDAF + K+RYDPIKKIF  HTG LPIHG
Sbjct: 65  SVSRVVSLLLEAEAAAEDTPASTSATGALRIIDAFIVPKYRYDPIKKIFLEHTGRLPIHG 124

Query: 126 DAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 185
           DA AKA LYRDRFLLL QRLSRD HFS+PAFD  +S FG+C+ISPIQSLVG+TG+ WVMG
Sbjct: 125 DASAKATLYRDRFLLLFQRLSRDPHFSRPAFDTDLSQFGNCQISPIQSLVGRTGKCWVMG 184

Query: 186 VISQMEDGHFYLEDLTASVEINLSNAISFTGN 218
           VISQ+EDGHFYLEDLTA+VEINLSNAIS   N
Sbjct: 185 VISQLEDGHFYLEDLTAAVEINLSNAISLPAN 215

[Close]
BLAST of MELO3C001937 vs. TAIR10
Match: AT5G22110.1 (AT5G22110.1 DNA polymerase epsilon subunit B2)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-58
Identity = 122/213 (57.28%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFED-DAIELVLDDLHEESLKSPILEKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +F   +D +AI+L+LD+L +E+ KS  ++ +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  GVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHG 126
            V  +I++LL A  A E      TS ++L IIDAF + KF YD +KK F+ HT  LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPE---EPTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           VISQ+EDGHFYLEDL+ASVEI+LS A   TG F
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFF 215

[Close]
BLAST of MELO3C001937 vs. NCBI nr
Match: gi|659066275|ref|XP_008463560.1| (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.7e-114
Identity = 214/218 (98.17%), Postives = 214/218 (98.17%), Query Frame = 1 

Query: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60
           MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP
Sbjct: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60

Query: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120
           ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD
Sbjct: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120

Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           KWVMGVISQMEDGHFYLEDLTASVEINLSNA   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLF 218

[Close]
BLAST of MELO3C001937 vs. NCBI nr
Match: gi|700210427|gb|KGN65523.1| (hypothetical protein Csa_1G434690 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-107
Identity = 203/227 (89.43%), Postives = 214/227 (94.27%), Query Frame = 1 

Query: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF  HT +
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120

Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYDVEKSELV 228
           KWVMGVISQMEDGHFYLEDLTASVEINLS+AISFTGNFYDVEKSELV
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 226

[Close]
BLAST of MELO3C001937 vs. NCBI nr
Match: gi|778660923|ref|XP_011657177.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 1.3e-98
Identity = 190/218 (87.16%), Postives = 201/218 (92.20%), Query Frame = 1 

Query: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF  HT +
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120

Query: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           KWVMGVISQMEDGHFYLEDLTASVEINLS+A   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLF 217

[Close]
BLAST of MELO3C001937 vs. NCBI nr
Match: gi|147818232|emb|CAN73546.1| (hypothetical protein VITISV_038180 [Vitis vinifera])

HSP 1 Score: 302.4 bits (773), Expect = 6.8e-79
Identity = 154/209 (73.68%), Postives = 181/209 (86.60%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDG 66
           RKKVQRK KIRG Y++K+EALDEI+SF+S F   ED+AI+L+LD+L  ESLKS IL+K+ 
Sbjct: 6   RKKVQRKFKIRG-YTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKES 65

Query: 67  VHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGD 126
           VHRV+S LL AE A E +P  I++ +AL I+DAF +SKF YDPIKKIF+ +TG L IHGD
Sbjct: 66  VHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGD 125

Query: 127 APAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           A AK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+GQTG++WVMGV
Sbjct: 126 ASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGV 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSNAISFT 216
           ISQ+EDGHF+LEDLTASVEINLSNAISFT
Sbjct: 186 ISQLEDGHFFLEDLTASVEINLSNAISFT 213

[Close]
BLAST of MELO3C001937 vs. NCBI nr
Match: gi|225455720|ref|XP_002267181.1| (PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera])

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-77
Identity = 153/212 (72.17%), Postives = 180/212 (84.91%), Query Frame = 1 

Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSPILEKDG 66
           RKKVQRK KIRG Y++K+EALDEI+SF+S F   ED+AI+L+LD+L  ESLKS IL+K+ 
Sbjct: 6   RKKVQRKFKIRG-YTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKES 65

Query: 67  VHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGDLPIHGD 126
           VHRV+S LL AE A E +P  I++ +AL I+DAF +SKF YDPIKKIF+ +TG L IHGD
Sbjct: 66  VHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGD 125

Query: 127 APAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           A AK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+GQTG++WVMGV
Sbjct: 126 ASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGV 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSNAISFTGNF 219
           ISQ+EDGHF+LEDLTASVEINLSNA   TG F
Sbjct: 186 ISQLEDGHFFLEDLTASVEINLSNAKITTGFF 216

The following BLAST results are available for this feature:
BLAST of MELO3C001937 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPB2_ARATH4.3e-5757.28DNA polymerase epsilon subunit B OS=Arabidopsis thaliana GN=DPB2 PE=1 SV=1[more]
DPOE2_DICDI2.1e-1931.88DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum GN=pole2 PE=3 SV=1[more]
DPOE2_BOVIN4.1e-1529.86DNA polymerase epsilon subunit 2 OS=Bos taurus GN=POLE2 PE=2 SV=1[more]
DPOE2_CHICK5.9e-1428.51DNA polymerase epsilon subunit 2 OS=Gallus gallus GN=POLE2 PE=2 SV=1[more]
DPOE2_MOUSE2.2e-1328.96DNA polymerase epsilon subunit 2 OS=Mus musculus GN=Pole2 PE=2 SV=2[more]
BLAST of MELO3C001937 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUV9_CUCSA2.4e-10789.43Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434690 PE=4 SV=1[more]
A5AMH8_VITVI4.8e-7973.68Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038180 PE=4 SV=1[more]
A0A059AW13_EUCGR3.0e-7367.44DNA polymerase epsilon subunit 2 OS=Eucalyptus grandis GN=EUGRSUZ_H00594 PE=3 SV... [more]
D7SIP4_VITVI6.7e-7368.08DNA polymerase epsilon subunit 2 OS=Vitis vinifera GN=VIT_17s0000g04830 PE=3 SV=... [more]
A0A161ZS40_DAUCA2.5e-7266.51Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023267 PE=4 SV=1[more]
BLAST of MELO3C001937 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22110.12.4e-5857.28 DNA polymerase epsilon subunit B2[more]
BLAST of MELO3C001937 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066275|ref|XP_008463560.1|1.7e-11498.17PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo][more]
gi|700210427|gb|KGN65523.1|3.5e-10789.43hypothetical protein Csa_1G434690 [Cucumis sativus][more]
gi|778660923|ref|XP_011657177.1|1.3e-9887.16PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus][more]
gi|147818232|emb|CAN73546.1|6.8e-7973.68hypothetical protein VITISV_038180 [Vitis vinifera][more]
gi|225455720|ref|XP_002267181.1|1.7e-7772.17PREDICTED: DNA polymerase epsilon subunit 2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0042276 error-prone translesion synthesis
cellular_component GO:0008622 epsilon DNA polymerase complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44588melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001937T1MELO3C001937T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44588MU44588transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 1..219
score: 3.0
NoneNo IPR availablePANTHERPTHR12708:SF0DNA POLYMERASE EPSILON SUBUNIT 2coord: 1..219
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C001937Cla018656Watermelon (97103) v1mewmB174
MELO3C001937ClCG04G012690Watermelon (Charleston Gray)mewcgB154
MELO3C001937Cla97C04G079720Watermelon (97103) v2mewmbB159
MELO3C001937Bhi08G001603Wax gourdmewgoB176
MELO3C001937Lsi02G000220Bottle gourd (USVL1VR-Ls)lsimeB179
MELO3C001937Cp4.1LG02g09970Cucurbita pepo (Zucchini)cpemeB491
MELO3C001937Carg06988Silver-seed gourdcarmeB0523
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C001937Cucumber (Gy14) v1cgymeB156
MELO3C001937Cucurbita maxima (Rimu)cmameB392
MELO3C001937Cucurbita moschata (Rifu)cmomeB383