MELO3C001916 (gene) Melon (DHL92) v3.5.1

NameMELO3C001916
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionChaperone DnaJ
Locationchr12 : 26373512 .. 26373751 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTGTCACCTATAACGTGAAATTTGTTCAGGTTGAAACTGTTGAAGGCTTGAAAGACCTCCAAATACCTGCTGGTGTTCAGCCAGGGGATAGAGTTAGATTGCCATTCATGGGGATTCCAGATATAAATAAACCTTCTGTTCGTGGTGATCATCTGTTTATTGTGAATGTTCAGATCCCGAAGCGTATCAGGTCCAGTTTTAACTATTATGATTTATGCCCCCCTCCCTCCTAG

mRNA sequence

ATGAGTTCTGTCACCTATAACGTGAAATTTGTTCAGGTTGAAACTGTTGAAGGCTTGAAAGACCTCCAAATACCTGCTGGTGTTCAGCCAGGGGATAGAGTTAGATTGCCATTCATGGGGATTCCAGATATAAATAAACCTTCTGTTCGTGGTGATCATCTGTTTATTGTGAATGTTCAGATCCCGAAGCGTATCAGGTCCAGTTTTAACTATTATGATTTATGCCCCCCTCCCTCCTAG

Coding sequence (CDS)

ATGAGTTCTGTCACCTATAACGTGAAATTTGTTCAGGTTGAAACTGTTGAAGGCTTGAAAGACCTCCAAATACCTGCTGGTGTTCAGCCAGGGGATAGAGTTAGATTGCCATTCATGGGGATTCCAGATATAAATAAACCTTCTGTTCGTGGTGATCATCTGTTTATTGTGAATGTTCAGATCCCGAAGCGTATCAGGTCCAGTTTTAACTATTATGATTTATGCCCCCCTCCCTCCTAG

Protein sequence

MSSVTYNVKFVQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSSFNYYDLCPPPS*
BLAST of MELO3C001916 vs. Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-08
Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRS 68
           ++V+TV+G  +L IPAG QP   + L   G+P +   ++RGDHL  V VQIP RI S
Sbjct: 289 LEVDTVDGKAELTIPAGTQPNTVLTLENKGVPKLGNATIRGDHLITVKVQIPTRINS 345

BLAST of MELO3C001916 vs. Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein DnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-07
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRS 68
           V V+TV+G ++L IPAG QP   + L  +G+P +   ++RGDHL  V V IP RI +
Sbjct: 288 VTVDTVDGEQELTIPAGTQPNTILTLENLGVPKLGNDAIRGDHLITVKVDIPTRINA 344

BLAST of MELO3C001916 vs. Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           + V TV+G  +L+IPAG QPG  + L   G+P +  P  RGDHL  V+V+IP  I
Sbjct: 285 ISVSTVDGEAELKIPAGTQPGTVLVLEGRGVPRVGNPVARGDHLITVDVEIPTHI 339

BLAST of MELO3C001916 vs. Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           V+V+TV+G +DL IPAG+QP   + L   G+P +  P  RGDHL  V V IP ++
Sbjct: 289 VKVKTVDGTEDLTIPAGLQPNKVLILEGKGVPKLGNPVSRGDHLITVKVMIPTKV 343

BLAST of MELO3C001916 vs. Swiss-Prot
Match: DNJA6_ARATH (Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana GN=DJA6 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-07
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           ++V TV+G  DL++PAG QP   + +   G+P +NK ++RGD L  V V+IPKR+
Sbjct: 363 LKVPTVDGTVDLKVPAGTQPSTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRL 417

BLAST of MELO3C001916 vs. TrEMBL
Match: A0A0A0LVB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031210 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-20
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 1

Query: 11 VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
          V+VETVEGLKDLQIPAGVQPGDRVRL  MGIPDINKPSVRGDHLFIVNVQIPKR+  S
Sbjct: 41 VKVETVEGLKDLQIPAGVQPGDRVRLSCMGIPDINKPSVRGDHLFIVNVQIPKRMSDS 98

BLAST of MELO3C001916 vs. TrEMBL
Match: A0A0B0PQB5_GOSAR (Chaperone DnaJ OS=Gossypium arboreum GN=F383_08552 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-16
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSSFN 70
           V+VETVEG+KDL+IP G+QPGD V+L  +G+PD+NKPSVRGDH FIVNV IPK IR   N
Sbjct: 365 VKVETVEGIKDLRIPCGIQPGDAVKLSRLGVPDVNKPSVRGDHHFIVNVLIPKDIR---N 424

Query: 71  YYDLCP 77
           Y+ L P
Sbjct: 425 YFGLEP 427

BLAST of MELO3C001916 vs. TrEMBL
Match: W9QWM5_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_019309 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.8e-16
Identity = 41/58 (70.69%), Postives = 51/58 (87.93%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
           ++VETVEG++DLQIP+G QPG+ V+LP MG+PDINKPSVRGDH F+VNV IPK I +S
Sbjct: 627 MKVETVEGMRDLQIPSGTQPGETVKLPRMGVPDINKPSVRGDHHFVVNVLIPKEISNS 684

BLAST of MELO3C001916 vs. TrEMBL
Match: A0A061G300_THECC (Molecular chaperone Hsp40/DnaJ family protein OS=Theobroma cacao GN=TCM_046739 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.6e-16
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           V+VETVEG+KDLQIP G+QPGD+V+L  +GIPD+NKPSVRGDH FIVNV IPK I
Sbjct: 367 VKVETVEGMKDLQIPCGIQPGDKVKLSRLGIPDVNKPSVRGDHHFIVNVLIPKDI 421

BLAST of MELO3C001916 vs. TrEMBL
Match: V4WE73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008033mg PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-15
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           ++VETVEG+KDL+IP+GVQPGD V+L  MG+PDIN PSVRGDHLFIVNV IPK I
Sbjct: 334 MEVETVEGMKDLRIPSGVQPGDTVKLQQMGVPDINNPSVRGDHLFIVNVLIPKDI 388

BLAST of MELO3C001916 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 77.0 bits (188), Expect = 5.8e-15
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1

Query: 12  QVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           +VETVEG  DL+IP G QPGD V+LP  G+PD ++PS+RGDH F+V + IPK++
Sbjct: 353 KVETVEGSMDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPKKL 406

BLAST of MELO3C001916 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           V+V+TVEG  +LQIP G QPGD + L   G+P +N+PS+RGDHLF V V +P +I
Sbjct: 362 VKVKTVEGDTELQIPPGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSVPNQI 416

BLAST of MELO3C001916 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-08
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           ++V TV+G  DL++PAG QP   + +   G+P +NK ++RGD L  V V+IPKR+
Sbjct: 363 LKVPTVDGTVDLKVPAGTQPSTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRL 417

BLAST of MELO3C001916 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-08
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI 66
           ++V TV+G  DL++PAG QP   + +   G+P +NK  +RGD L  V V+IPKR+
Sbjct: 369 LKVPTVDGEVDLKVPAGTQPSTTLVMAKKGVPVLNKSKMRGDQLVRVQVEIPKRL 423

BLAST of MELO3C001916 vs. NCBI nr
Match: gi|659066226|ref|XP_008441271.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X3 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
           V+VETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI  S
Sbjct: 327 VKVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRISDS 384

BLAST of MELO3C001916 vs. NCBI nr
Match: gi|659066224|ref|XP_008440493.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
           V+VETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI  S
Sbjct: 399 VKVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRISDS 456

BLAST of MELO3C001916 vs. NCBI nr
Match: gi|659066222|ref|XP_008439676.1| (PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
           V+VETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRI  S
Sbjct: 399 VKVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRISDS 456

BLAST of MELO3C001916 vs. NCBI nr
Match: gi|778656703|ref|XP_011649542.1| (PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-20
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 1

Query: 11  VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
           V+VETVEGLKDLQIPAGVQPGDRVRL  MGIPDINKPSVRGDHLFIVNVQIPKR+  S
Sbjct: 385 VKVETVEGLKDLQIPAGVQPGDRVRLSCMGIPDINKPSVRGDHLFIVNVQIPKRMSDS 442

BLAST of MELO3C001916 vs. NCBI nr
Match: gi|700208850|gb|KGN63946.1| (hypothetical protein Csa_1G031210 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-20
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 1

Query: 11 VQVETVEGLKDLQIPAGVQPGDRVRLPFMGIPDINKPSVRGDHLFIVNVQIPKRIRSS 69
          V+VETVEGLKDLQIPAGVQPGDRVRL  MGIPDINKPSVRGDHLFIVNVQIPKR+  S
Sbjct: 41 VKVETVEGLKDLQIPAGVQPGDRVRLSCMGIPDINKPSVRGDHLFIVNVQIPKRMSDS 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DNAJ1_SYNY33.8e-0847.37Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ... [more]
DNAJ_CYAA51.1e-0745.61Chaperone protein DnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1[more]
DNAJ_THEEB1.9e-0747.27Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE... [more]
DNAJ_SYNP21.9e-0747.27Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6... [more]
DNJA6_ARATH3.2e-0745.45Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana GN=DJA6 PE=2 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0LVB1_CUCSA2.3e-2089.66Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031210 PE=4 SV=1[more]
A0A0B0PQB5_GOSAR2.0e-1668.18Chaperone DnaJ OS=Gossypium arboreum GN=F383_08552 PE=3 SV=1[more]
W9QWM5_9ROSA5.8e-1670.69Chaperone protein DnaJ OS=Morus notabilis GN=L484_019309 PE=3 SV=1[more]
A0A061G300_THECC7.6e-1676.36Molecular chaperone Hsp40/DnaJ family protein OS=Theobroma cacao GN=TCM_046739 P... [more]
V4WE73_9ROSI1.3e-1576.36Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008033mg PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT3G17830.15.8e-1559.26 Molecular chaperone Hsp40/DnaJ family protein[more]
AT1G80030.12.1e-1256.36 Molecular chaperone Hsp40/DnaJ family protein[more]
AT2G22360.11.8e-0845.45 DNAJ heat shock family protein[more]
AT4G39960.14.0e-0845.45 Molecular chaperone Hsp40/DnaJ family protein[more]
Match NameE-valueIdentityDescription
gi|659066226|ref|XP_008441271.1|2.1e-2294.83PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X3 [Cucumis melo][more]
gi|659066224|ref|XP_008440493.1|2.1e-2294.83PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Cucumis melo][more]
gi|659066222|ref|XP_008439676.1|2.1e-2294.83PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Cucumis melo][more]
gi|778656703|ref|XP_011649542.1|3.3e-2089.66PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X3 [Cucumis ... [more]
gi|700208850|gb|KGN63946.1|3.3e-2089.66hypothetical protein Csa_1G031210 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002939DnaJ_C
IPR008971HSP40/DnaJ_pept-bd
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043167 ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005488 binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C001916T1MELO3C001916T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002939Chaperone DnaJ, C-terminalPFAMPF01556DnaJ_Ccoord: 11..62
score: 7.
IPR008971HSP40/DnaJ peptide-bindingunknownSSF49493HSP40/DnaJ peptide-binding domaincoord: 11..66
score: 1.02
NoneNo IPR availableGENE3DG3DSA:2.60.260.20coord: 11..63
score: 7.
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 11..68
score: 1.5
NoneNo IPR availablePANTHERPTHR24078:SF231CHAPERONE PROTEIN DNAJcoord: 11..68
score: 1.5