MELO3C000505.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C000505.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Anthranilate synthase component I-2
Location	chr12 : 12400527 .. 12400787 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTATCAATCACAATAGTTAAATTAAGTGCAAGTTATTAGATTGGTATGGGTCGGGAGAGACTGTTGTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTGGTTCATCATGTTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACACATATTTATGGAGGCCAACATTAGATATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGCATGACCATCTGAAAAAGTGATCATT

mRNA sequence

AGTATCAATCACAATAGTTAAATTAAGTGCAAGTTATTAGATTGGTATGGGTCGGGAGAGACTGTTGTGAAGGAAGATGGTCTTCTAATGATCCAACTACTCTGGTTCATCATGTTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACACATATTTATGGAGGCCAACATTAGATATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGCATGACCATCTGAAAAAGTGATCATT

Coding sequence (CDS)

ATGATCCAACTACTCTGGTTCATCATGTTTCCTATTGGTCCACATGCGATTAGAGTATGGGTTGATGTAGCAAAGAAACCAAACACATATTTATGGAGGCCAACATTAGATATGACATGTATTGAAGAAGCTTTGGGAAGTACAGTTGCATGA

Protein sequence

MIQLLWFIMFPIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA

Homology

[Close]

BLAST of MELO3C000505.2 vs. NCBI nr
Match: XP_016903682.1 (PREDICTED: uncharacterized protein LOC103504411 [Cucumis melo])

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-14
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKKPN YLWRPT +MTCIEEALGSTVA
Sbjct: 96  PIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVA 135

[Close]

BLAST of MELO3C000505.2 vs. NCBI nr
Match: XP_008467069.2 (PREDICTED: uncharacterized protein LOC103504506 [Cucumis melo])

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-14
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKKPN YLWRPT +MTCIEEALGSTVA
Sbjct: 82  PIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVA 121

[Close]

BLAST of MELO3C000505.2 vs. NCBI nr
Match: XP_016903678.1 (PREDICTED: uncharacterized protein LOC107992334 [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-12
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKK N YLWRPT +MTCIEEALGST A
Sbjct: 121 PIGPHAIRVWVDVAKKSNAYLWRPTSEMTCIEEALGSTFA 160

[Close]

BLAST of MELO3C000505.2 vs. NCBI nr
Match: XP_024021724.1 (uncharacterized protein LOC21400762 isoform X1 [Morus notabilis])

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           P+GP+A+RVWVDV KKP+ +LWRPT +MT IEEA+G T+A
Sbjct: 685 PLGPNAMRVWVDVVKKPDAFLWRPTSEMTSIEEAVGCTIA 724

[Close]

BLAST of MELO3C000505.2 vs. NCBI nr
Match: XP_024021725.1 (uncharacterized protein LOC21400762 isoform X2 [Morus notabilis])

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           P+GP+A+RVWVDV KKP+ +LWRPT +MT IEEA+G T+A
Sbjct: 685 PLGPNAMRVWVDVVKKPDAFLWRPTSEMTSIEEAVGCTIA 724

[Close]

BLAST of MELO3C000505.2 vs. TrEMBL
Match: tr|A0A1S3CSU8|A0A1S3CSU8_CUCME (uncharacterized protein LOC103504506 OS=Cucumis melo OX=3656 GN=LOC103504506 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKKPN YLWRPT +MTCIEEALGSTVA
Sbjct: 82  PIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVA 121

[Close]

BLAST of MELO3C000505.2 vs. TrEMBL
Match: tr|A0A1S4E638|A0A1S4E638_CUCME (uncharacterized protein LOC103504411 OS=Cucumis melo OX=3656 GN=LOC103504411 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKKPN YLWRPT +MTCIEEALGSTVA
Sbjct: 96  PIGPHAIRVWVDVAKKPNAYLWRPTSEMTCIEEALGSTVA 135

[Close]

BLAST of MELO3C000505.2 vs. TrEMBL
Match: tr|A0A1S4E621|A0A1S4E621_CUCME (uncharacterized protein LOC107992334 OS=Cucumis melo OX=3656 GN=LOC107992334 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-12
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           PIGPHAIRVWVDVAKK N YLWRPT +MTCIEEALGST A
Sbjct: 121 PIGPHAIRVWVDVAKKSNAYLWRPTSEMTCIEEALGSTFA 160

[Close]

BLAST of MELO3C000505.2 vs. TrEMBL
Match: tr|W9RRP8|W9RRP8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017777 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.1e-09
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           P+GP+A+RVWVDV KKP+ +LWRPT +MT IEEA+G T+A
Sbjct: 710 PLGPNAMRVWVDVVKKPDAFLWRPTSEMTSIEEAVGCTIA 749

[Close]

BLAST of MELO3C000505.2 vs. TrEMBL
Match: tr|W9SIX0|W9SIX0_9ROSA (Anthranilate synthase component I-2 OS=Morus notabilis OX=981085 GN=L484_025310 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-08
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 11  PIGPHAIRVWVDVAKKPNTYLWRPTLDMTCIEEALGSTVA 51
           P+GP+A+R+WVDVAK+P+ +LWRPT +M+ IEEA+ S VA
Sbjct: 215 PLGPNAVRLWVDVAKQPDAFLWRPTSEMSTIEEAISSNVA 254

The following BLAST results are available for this feature:

BLAST of MELO3C000505.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903682.1	7.3e-14	92.50	PREDICTED: uncharacterized protein LOC103504411 [Cucumis melo]	[more]
XP_008467069.2	7.3e-14	92.50	PREDICTED: uncharacterized protein LOC103504506 [Cucumis melo]	[more]
XP_016903678.1	2.4e-12	87.50	PREDICTED: uncharacterized protein LOC107992334 [Cucumis melo]	[more]
XP_024021724.1	9.2e-09	67.50	uncharacterized protein LOC21400762 isoform X1 [Morus notabilis]	[more]
XP_024021725.1	9.2e-09	67.50	uncharacterized protein LOC21400762 isoform X2 [Morus notabilis]	[more]

BLAST of MELO3C000505.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C000505.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C000505.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CSU8\|A0A1S3CSU8_CUCME	4.8e-14	92.50	uncharacterized protein LOC103504506 OS=Cucumis melo OX=3656 GN=LOC103504506 PE=...	[more]
tr\|A0A1S4E638\|A0A1S4E638_CUCME	4.8e-14	92.50	uncharacterized protein LOC103504411 OS=Cucumis melo OX=3656 GN=LOC103504411 PE=...	[more]
tr\|A0A1S4E621\|A0A1S4E621_CUCME	1.6e-12	87.50	uncharacterized protein LOC107992334 OS=Cucumis melo OX=3656 GN=LOC107992334 PE=...	[more]
tr\|W9RRP8\|W9RRP8_9ROSA	6.1e-09	67.50	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017777 PE=4 SV=1	[more]
tr\|W9SIX0\|W9SIX0_9ROSA	6.8e-08	62.50	Anthranilate synthase component I-2 OS=Morus notabilis OX=981085 GN=L484_025310 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000505.2.1	MELO3C000505.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C000505.2	Cucumber (Gy14) v2	cgybmedB009
MELO3C000505.2	Cucumber (Gy14) v1	cgymedB528
MELO3C000505.2	Cucurbita maxima (Rimu)	cmamedB425
MELO3C000505.2	Cucurbita moschata (Rifu)	cmomedB400
MELO3C000505.2	Cucurbita pepo (Zucchini)	cpemedB033
MELO3C000505.2	Wild cucumber (PI 183967)	cpimedB011
MELO3C000505.2	Cucumber (Chinese Long) v2	cumedB010
MELO3C000505.2	Melon (DHL92) v3.6.1	medmedB071
MELO3C000505.2	Bottle gourd (USVL1VR-Ls)	lsimedB257
MELO3C000505.2	Watermelon (Charleston Gray)	medwcgB129
MELO3C000505.2	Watermelon (Charleston Gray)	medwcgB133
MELO3C000505.2	Watermelon (97103) v1	medwmB159
MELO3C000505.2	Watermelon (97103) v1	medwmB167
MELO3C000505.2	Silver-seed gourd	carmedB0000
MELO3C000505.2	Cucumber (Chinese Long) v3	cucmedB009
MELO3C000505.2	Cucumber (Chinese Long) v3	cucmedB021
MELO3C000505.2	Watermelon (97103) v2	medwmbB129
MELO3C000505.2	Watermelon (97103) v2	medwmbB132
MELO3C000505.2	Wax gourd	medwgoB176