LsiUNG000930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	LsiUNG000930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATP-dependent DNA helicase Q-like 2
Location	chr00 : 2633814 .. 2643275 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGTTCATCTTCATCTTCCTCTCCCCATTTTCTTCACAAGAGCAAAATTCATAAAGCTGGAGAATGTAGAAACGAAAGATACAATTATTTGAATTTGGGTCAAAATCCAAAAGTTAAGTGAAGGGCATCGTCATTTGGCCTTTGTGATTTGAATCTTTTATCTCTCTCAGCATAAGATCAGCAAAATAAGACCATTTCTATATTTATTTTGCTGTTTCTTCAAAAACTGAAGATTATAGTTCCGAATTTGGGTTTTCAATCCACATTAACCATTGTTTACTGTTTGATTTGCAGCATTTTTGGGTACGAATCGATGGGTCTGTGTACTTTAAAATCGTGTCGATGATCATGGCTGTTCCGGCAAAGGGCAGTTCAGTTCAAGTAATCGAATGTCTGCTGCCATTGGAGCCACCGTCGCACTACTTCTCCCTTTTCAGTTCGAGTCCCGCTCACTGGCTCTTCCCAAAAAAGAAAATTTCATTCTCCTTTTATGAATCGTGTTTTTGTGAAGAGAATGGGGGATGGAAGATGAATAGGGAAGGTGGAGGGAGTAGAGAGAGGAGAGAGAAAGAGATGAGGGATGAGAGAGAATTTTAATTTTTATTTAAAAATGGTCATTCATAATTAAAGTAATAAAAGAAAATAATACTAAATGAGAAATATGAGGTTAAGGACCATTTAAATCTATTTTTTAAAATTTGGGGACTAAAATGACTAATTTAAAAAAGAAGCCATTGTACTTATTATTGAAAACTCGTATTTTTTCCCTTTTTTTTTTGTTTTTTTTAAAAACTAAAGACTCAGGAGAGGCGAATGCGACGACGGTAGGGCAGCCTAATCCCGGCGACGCGATCGGCGGAAACTCTGCAAAATCTTCTCGGTCCAGAACTCAAAATATTGCCAATTTCGTCAACGTCGGTTCATTTTCAGGTGTCTTAGGAGTCAATGGCTGTTGCTGTCTCGACCTTCATTTCCATCATCCACTCCTCTGAGCTCCTCACATTACTCTGACTCTTAAGAGTTTCTGTCTTGATTACCTTTGTTCAAAAGCTGGATTCTAATTTGCGATCTAGAGATGAACACTGAAGAAGTTTTAGAGGAGCTTCTCAACGTAGAAGTGCAGATAAACGAAGTCCAAGGTGCTTTGCAGTCATCATCTTCTCTCTTTTTGCGTTCCTTTATTCTTTATAATGTATGCCTAAATGTCCATTGTTTTCATTGCTGCTTTTGTGTTTAAACTCATGCTAACTTCTTGTAAGGAGTTAAAAGTTGGAGAAATTTTTTGCATGTACTAGTGGAAGTCCTCAAAGGAACTGAAAATTTGTGTGTTGTTTCGGTTGAATCAATCTGTTACTTCCATTTTAGTGGTTATTTCGCATTGTATGTCCCGTAGCAGTTAAAATCTCCCACACTGCCGAAGCTGGCGTGGTATAGACTATCTTAGTGATCGAATCGATATGATCTTCAACAGTCTATTATGAAGATTGATGAATTTCTTTATAAATTGCGCGCCTTATATGTTGATGATATCTCAGTATAGAACTTACGGTTTTTAAAATTGATCGATTTTAATGTTAGCACAATAGATTATGTAATTTAGTTATTTTGGGTTGTCCTCATGTTTCGCCTCATGCCTAATCTTTCTGCAGCTGAAATAAATGTACTTCTGGAACGCCAAGACAACTTGTACCAAAGAAAATCCGAGCTGCAGTCTTTGTTAGAACTCTGCAAAGAAACAGATGATTCAGTTAGTCAGGGTACAGGCACTTCTACGAATTCAGAAAATTGGTCTGGTTCATTTAAATGGGATTCTGACGCGGACGACGTTAAGTTGAACATCTTTGGCATATCCTCATATCGTGCAAACCAGCGAGAGGTAAGTAGTTTCATTTGGTTTTTTTTTTTCTCATATATTGTTTATATCTTTGGTGCTGTTGTTTATTAACTGGAAATGGTCAAAGATAAAAAGTGAACAGAGAGCAAGCCATCTCGTTGTTAAATGCAGGTTTGCTTTGGTGAAGTATGTACTATAGTTTCACTGGAATATAAATAGAGTTGCTTACTTTCCCTTCATAGGTCTAAAGGAAAAAAGCCTAACTGAATATATGAATCAATATAAGTTACCTCTAAGTCTCTGACTGACTACCATGATGACCACTTACATGGCATACTCAACCAATGGACCAATGATGACTGCGAGTGTGATGGTACTCGGAAAACAATTCAAACCTATCTACGCTATTTGTTTGATTGTTCTTATTTAGAAGAACACCTTGATTTTTCCACTATTATTCAAATCAACGAATATTTACCAGTAATCAACTCAGGACAATATGTTAAACTGTTGAACTTGTCTTTGTGATGCTATTGTTTTCCATTCTTTGTGAGTGGATTTACTAATGGTCGCATTATAGTAGATTGTCAATGCTGTCATGAGTGGGCGAGATGCTTTGGTGATTATGGCTGCTGGAGGTGGGAAGAGTCTTTGTTACCAGCTACCAGCTCTTCTATATGATGGCCTTGCTCTGGTTGTCAGTCCCTTGCTTTCTTTAATTCAGGATCAGGTACCTCCTAGTTATATTTTTCGTGTTTTGATGTTAAGTTCTGTAAGTAGTGGTGTAAATTTCAATAGAAAGAAACTGAAAGATTGACCAAACTGGCATACTGAGTAGGTTCTGTGAGTTTGCCTAATGTTAAGTTCTGTCAGTAGAGGTTTAAATTACAATAAAAAGAAACTGAAAGATTGACCAAACTGGCATACTGAGTAGGTTCTGTCAAGTTTATATTTTTTCAATTTTATATGTGTTGGAATAGAAAATATGTCAGCCTGCTGGTTTTGATTTATTTGATTTAGAAGAAATTCTATACTCTTGGTTGTTTTTAATTTTTCTGTAATCAATATTTTTGTTCAACATTGATTTTTGGGAAAAAAGAGGAACTGTATTGCCTTGATTATGAACACCTGCATCTCACTTCTTGTAATTATTTAACTTTTGATCAAGAACATGAACACCTTTTTTCAGGTTATGGGTTTGGCTGCTTTAGGAATTTCAGCATCTATGCTTACATCCGCAACTAGTAAAGATGACGAGAAGTTCATATACAAGAATCTTGAAAAGGGTGAAGGGAGTATAAAAATATTATATGTCACACCAGAAAAAATATCAAAGAGCAAAAGATTTATGTCTAAACTTGAAAAGTGCTATCATGCTGGTCGTCTTTCTCTTATTGCAATTGACGTGAGTATATCTATCAACAGCAGAATTTCTTGCTTTAGTACCTATGTAAAATTCCCCAGAACTAAAGATTTTAGGTTAGAGTTAATATTTTTATTAAGTTAATGCTCACATTTCAATGAACAATGAGTTTTCACATGCAAGAAATGAAATTTTTTGGACTTATTTGTCTGTCTCTGTAGGAGGCTCATTGCTGTAGTCAGTGGGGCCACGACTTTCGACCTGACTACAAGAATCTTGGTATTCTGAAGACTCAGTTTCCAAATGCTCCTGTGATTGCTTTGACTGTATGTTATTCTACCTTTGTGGAAAATGGCTATCTTATATACTCTTTTAAACTGACTATGTTGTTAATTAAATATCTTGTTATACTCTTTTAGGCAACTGCCACTCAGAGGGTTCAAAATGATCTGGTTGAAATGCTTCGCATCCCCAAATATGTCAAATTCGTCAGTACAGTCAACAGGCCGAATCTCTTTTACATGGTATACTGTAAACCTTGTCAAGAAAAAGGGTCTTTGGGAGATTCCTACTAAATGATTCAGTCAATGTATTACAGGTAAGGGAGAAGTCATCTGTTAGCAAGGTAGTGATTGATCAAATAGCTGAATTTGTACAAGAATCTTATCCTAACAATGAATCTGGGATAATATACTGCTTTTCCCGAAAGGAGTGTGAGCAGGTCTGTATCTAACTCTCTATGCTCCATCTGCATTACTTCGATTATAGTAAACGTTTACATATTGGCTTAACGAAAAATAGTTCTAGAACCTGTTCAATCTGACTGATTTAGAGCAATATATTAAGCAGTCAACCCATAAGGAAATAATCTAGGATTCACACCCTAAGAAATATTTTAGGAATTATCAGCTAACTAAGGGAATAAAAATTAATCAATATAAGATGAAACTGTTTGGAACCACCATGGTTATGCCTAATGGTCAACAAAGGCCATGTAAATAAAGAAAGGCATAGAGGAATGGGTTTAAGCCCTGTTGCCACCTTTCTAGGATTTTATTTCCAGTCAGTTATTTGGCAACTGAATGCAGTAGGGTCAAATGGTTGTCACGTGAGAATAGTTGTGGTGCATGCAAGCTATCTTGAACACTCACAAATATATAGATATAAAAAATGAATGAAACTATTTGGTAGTGATTGAGAAGAATTCTTGCTGTCATAGATTTCTGCAGAACTTTTGCAATTAATGTGGAATATTTTTAGCTGACATGGTAATCTTCAGCACCAGCTGATAGAATTAGAATCATTCGTGATCAATGTTCCTTTAGCTTGGTATGGTGGATCATATCACTTCAATCTTCTCAGAGATGTGATTTGAATGAACCAAAGAATCTTCAATGATAAATTTTGAAATTTAGAAATGGGTATGGGCCCATTCGATAAATGTTATTCTTTTTAATAAAAGAAAATAGATGTCTTTAACAACCATAATTTGTTTTTTGAACATTTATGAAATTAGACGACAAAAGGAGAAAAAGAAATAGGAAAAAAAAGGTTATGACATGGGCCCAAATCTTTGGCTAATTGATGTGCCCTCAGTTTCTTTGAAACTGCAGTTTTTTTCTTTATGAAGTCTAATTGGATCACTTTTCAAATTTTTTTTTCCTGGGTGTTTTCTGGTACAATCAGCTATTCCTTGGTGCAAATGTACATCTTTCTTTAGTTCATATGATCTTACATCTCTTTTGACCAATTGGAGAAGTCTTCTGTAACTCCTTTGGTTCGGGCATCTTGCCCATCTAAGAAACACAGACACTTTAGTTAGGCTACTGTGTCCGTGTCCGACACGTGTCAGACACTGGACACTCCGACACTTGTTGGACATGTATTGGACACTTGTTAGTGCAACAAATGTGTTAAACATGCATTGAACACTTGTTGAGTAGACTAAAAAGACACATATATGACCATAATAATAACTTTTGAGTGTGAGATACATCAAGCTAAGTCTTTTAAGAATACAAATGCATCAAGCGATTTACTTTGAATTTTATTTTGGTACGAAAATGATATATATTTTTAAAAATATATATTTTAATAAACGTGTCCTTGCCGTGTCGTGTCCTAGATATTTAAAATATGGCGTGTCGCCGTGTCCGTGTCGTGATGTATCCGTATCCGTGCTTTTTCGTTGCCCATCTCTTGTAAATTTCATACATCAATGAAATTTGTTTCTTATTAAAATAATAATAATAATAATAATCATTTGTCCGTTTCACATAGTCAGTGAACAGTTTAATTTCCTATAAGAAATAGTTTAAAGGCAGATTTGCAAATTGTTTTGTCATACAATTGCTACTACTTTTCACGAGGGTTTGTAATTTGACTGTGGTTGTGCTTTGTGCATTGTCTGCCTCACTAATTATAATGCGGGATCTTGTTTATACATGACACCGGAAGCTTGTGTTTCTCTTATTTCTTCAAGAATTATAGGTTGCAAAGGAGTTACGTGTGAGGGGTATTTCTGCTGACCATTATCATGCTGACATGGATTCTGTTGCGCGTGAGAAAATTCATATGCGGTAAAGTTATTCTGCTTGCCAGTCAATGTTATTGAAACTGTATTTACTATTTATATGCGGTAATTTAGGAGAAAGCAGATTTGCTTGCCACTTGTTAAGGTGGGATATCTTTAATAATAATATAGAAGTATAAAACCAAGACGTAAGCATGGCCAATGATCACTTTCTAAAAAGCATGAGCAACACTGCTGTGTACGATATGGATTTAGATGGCAAAATCTCTAATGAAATAACATATCACATTTTAAACTTAAGGAGTAAAGCTACTTTGTTTGGACATCTTTATTTAAATCTCTGCTTGATTCTTGATTCCATTTATCAAGTTTCTTCAATATCTTATGAATGTTTCCTACCACAGGTGGAGCAATTCTAGGTTGCAGGTTATTGTTGGCACGGTATGCATTAATTTGATTTTATTCCAATAGATAAGAAGATACATTTACAAGTATTCAACCAAAGGTATCTCCTTCGATGAATAAAAAATGGGGTGTTCTGATAATCTCTGCTTTTGCAAATCTGGGTTGGGCATTTGTCGAGCATTAATGGGAATAGGGAGCTTGTACGTAGAATGGTGGAAACTGGAGAGTAAGATGACTATGATATGAGTAATTAAATTTTTTGTATTAACTATTTCTAGTGGGTTTAGGATGCCAATGCAATGCCCAACAGTAACATAGGTTTTTTAAACCTTCTCCCCCACTTCATTACTGCATGCCAAATGTTCCATATCCCAATGCTAAGGAACGGGTACTGGGAATGACATTTAAAAGAGGTAAGTTCTGGAACCCAGTTTAGGTGGCCTATTGAGATCATCCTATTATAAAGAGTGAACGAACATTCAATCTTGCAGCAACTTTTCATTTTCTAGCATCTTATTATGTAAAGGCATTGCATTTGTTAGCTGATCTGATAGCTTGAAGTACTTTGGCATTTCAGGTGGCCTTTGGTATGGGAATCAACAAACCAGATGGTTAGTTTCTCCGCTAATTTATGCCTTTGACAATGTTGCGTGACTTCTTCCTCTTTTTCTCTTTCAGCCAACAAATTTTCACTAATAATGCTAGTTCGTGATATTTGTGTTCGATTATGGCCCATCCTTCATTTTTGGATAGCCTCTAAAGTGATAATACTTGTTTGGTCATTTTTGAAAGCTGGTTGTTAAAATTTGTGCAAAATAGGGTATCCCTTTTGCTCTTGGATTATATTTCATTTTGCATGTCTTGAAAAAGTTGGGGCACAAAGGATGAACTCTACTCAATGTTCCTTATCTTTGAAAAAGGTGAACGAAAGATGGGGCAAACATAGAGGTGAATAGAAGGGAGAAGATGAGAGAATAGGAAGGTCAAGGGGTGTGTGTTTGTCTGTGTTTTAATCTTAATTTTTAAAATGCAGTACGGGGCTTTTTTTTATCTGACACATAATATTTGAACATTTGATACATATTTTGAAACCTAATTCTCGGTTACTGTTTGTAGTCAGGTTTGTCATCCATCACAGTCTGAGCAAATCAATGGAAACATACTATCAGGTCCTTCTCTTACTAAACATGCATTGTATTCAATGCTCTCCCTTTGTAACTTCTTGTGTTACAGGAAAGTGGACGAGCTGGACGGGATGGGCTTCCATCTGAATGCCTACTTTACTACAGGCCTGGTGATGTCCCAAGACAAGTAGGTAGTTTTTGAGGCATTGGGATGAGCTTATGTGTATTATTAAACCTCCTTTAAAATTTATTAATGTATGCTGTCATCCTTTGCAGAGTTCAATGGTATTTTATGAGAACTCTGGATTGGAGAATCTCTATGGTATTGTTCAATATTGTCAGGTATTATCTTTACATTAAATCAAGAAGTGTTTGAGTACTTTTTTTAAATTGTATTTTTTTAGTTAGTAAAAAAAATGATATAATTGCAGAGGTGTTAGTTCAATTAACAAAAATGTTTTACCTTTTCCCTTCCCTTTTTTTTTTTTTTTAAATCTATTTGTTTGGAAATAGACAAGATAATTTTGGAGATTTCAACCTACTTCAGATGAGAAGGAAATTTAGCATTAAATATCTTCATTTCATTTTTTTACTTTATGTTAGTTGACAGTTGAGATGATATAAACATCCTCATCTTCATTTCAATATGTTCTTATTTTTTATTTTTTAATTATTGCAGTCCAGAAGACAATGTCGCCGCAGTGCCTTTTTCCGACATTTCGCTGAGCCATTAAAAGACTGCAATGGTACCCCTTCCCCCCATTTTTTTAAAAATTATTACTTTATTTATTTGTGGGGCGGTGGTGGTTCTGTAAACACTTTCTATTTTTCTCTCTGGAAAAATAATCATACTTTAAAATTTTCAGGGATGTGCGATACGTGTGCAGTTGCCAGCGAGGTTAAGGAATTGGATGTCTGTAGTATGTTCCTTCAACTTTTGTTTCTAATGCCTATTTATTTTAAGTAAAGAGGTCATTCTTTACCACTTGTATGCCCCTTGCAAAATTTCTCTTTAGTAGAGGAAATGGCACAAACCACCTTATGGGTTGTTAAAATTGCATTGCACCCCTAAACTTTCAATTATAAAAATGGTTAAAATTTTATTTTAGTCACCGTACTTTGAAATCTGTTTAATTTTAGTCTTTGTACTTTCAATTGTCCAATTTTAGTCCTTGTATTTTCAATAGATCTTAAATTTAGTCATCAATGCTAGTTTATTGTTGATTTTTAAAAATATTTTTGTTATTTAATAGCATTTTTACTACAAATTTTGAAAACATATTCATATATTGTATTTCCTTGCAATAAAATTATTATTATTATTTAATCAATTTTGGTAAAAATTAACTTTGAGGGACTAAATTTAAGATTTAATGAAAGTATGGGAACTAAAATTGGATAATTGAAAGTATTGGGACTAAAATTGAACAAACTTCAAAGTATGAGAACCAAAATAATATTTAACCTATAAAAATTAAACCTCAAACTTTGCATAATTGTAAAAATTGAGCTTGCAAATTTTTTATTGTAAAAATTAAACCCCAACAATGTACATTCCATCAAAAGACAACAAAAACAACCTAAGGGCAAGGGGTTGAGAAAGACCCCCCTCCCCAAAACACTAATGAAGAAGAGCCTTCCAATTGTTAAAATCATCAAAACGCTATAATTACAAAAGAATTTGGTGTAATTTGTGCACCACCAAGAGGCTGTATGTTGAACAAAAGCCCAAAAAGAACCAAAAGAAGCATACTTATCTTAACAAATTCTACTTTTCCTTTATTTCCAAAGGCACCACAAGAGAGACTGTGCAACGCATCTCCAAAGAACTTTCCCTTTGCCAACGAAAGCAAAACCCTTTAACTTACACGATTGTAAAAATTGAGCACTTTCTATTAAATTCGTCCTCCCATTTCTCCTTCTGCTTGGGACCTGCAATGGCAGCACTCACTCAATAATCAGCCTTGAACTGAAGAAGATGGAGGTGAGGGGATTTCAATTTGAATACCCAAATTGGAAGCAAAGGCATCTACCTCTGAGCTGGTAGGTATTGTTGTCTTCTACCTCCGAGGCTCTACTGGCTGGCTGAACTTCCCAGAATTGATGTTTGAAGAGGACCAGCTTCATGACATGTCGGCTGCCTCCACATGGAAACAAGCACCGCAGTTGGTGCTTGAATTTATGGCCACGGCAGATTCCTAG

mRNA sequence

CCTGTTCATCTTCATCTTCCTCTCCCCATTTTCTTCACAAGAGCAAAATTCATAAAGCTGGAGAATGTAGAAACGAAAGATACAATTATTTGAATTTGGGTCAAAATCCAAAAGTTAAGTGAAGGGCATCGTCATTTGGCCTTTGTGATTTGAATCTTTTATCTCTCTCAGCATAAGATCAGCAAAATAAGACCATTTCTATATTTATTTTGCTGTTTCTTCAAAAACTGAAGATTATAGTTCCGAATTTGGGTTTTCAATCCACATTAACCATTGTTTACTGTTTGATTTGCAGCATTTTTGGGTACGAATCGATGGGTCTGTGTACTTTAAAATCGTGTCGATGATCATGGCTGTTCCGGCAAAGGGCAGTTCAGTTCAAGTAATCGAATGTCTGCTGCCATTGGAGCCACCGTCGCACTACTTCTCCCTTTTCAACTCAGGAGAGGCGAATGCGACGACGGTAGGGCAGCCTAATCCCGGCGACGCGATCGGCGGAAACTCTGCAAAATCTTCTCGGTCCAGAACTCAAAATATTGCCAATTTCGTCAACGTCGGTTCATTTTCAGGTGTCTTAGGAGTCAATGGCTGTTGCTGTCTCGACCTTCATTTCCATCATCCACTCCTCTGAGCTCCTCACATTACTCTGACTCTTAAGAGTTTCTGTCTTGATTACCTTTGTTCAAAAGCTGGATTCTAATTTGCGATCTAGAGATGAACACTGAAGAAGTTTTAGAGGAGCTTCTCAACGTAGAAGTGCAGATAAACGAAGTCCAAGCTGAAATAAATGTACTTCTGGAACGCCAAGACAACTTGTACCAAAGAAAATCCGAGCTGCAGTCTTTGTTAGAACTCTGCAAAGAAACAGATGATTCAGTTAGTCAGGGTACAGGCACTTCTACGAATTCAGAAAATTGGTCTGGTTCATTTAAATGGGATTCTGACGCGGACGACGTTAAGTTGAACATCTTTGGCATATCCTCATATCGTGCAAACCAGCGAGAGATTGTCAATGCTGTCATGAGTGGGCGAGATGCTTTGGTGATTATGGCTGCTGGAGGTGGGAAGAGTCTTTGTTACCAGCTACCAGCTCTTCTATATGATGGCCTTGCTCTGGTTGTCAGTCCCTTGCTTTCTTTAATTCAGGATCAGGTTATGGGTTTGGCTGCTTTAGGAATTTCAGCATCTATGCTTACATCCGCAACTAGTAAAGATGACGAGAAGTTCATATACAAGAATCTTGAAAAGGGTGAAGGGAGTATAAAAATATTATATGTCACACCAGAAAAAATATCAAAGAGCAAAAGATTTATGTCTAAACTTGAAAAGTGCTATCATGCTGGTCGTCTTTCTCTTATTGCAATTGACGAGGCTCATTGCTGTAGTCAGTGGGGCCACGACTTTCGACCTGACTACAAGAATCTTGGTATTCTGAAGACTCAGTTTCCAAATGCTCCTGTGATTGCTTTGACTGCAACTGCCACTCAGAGGGTTCAAAATGATCTGGTTGAAATGCTTCGCATCCCCAAATATGTCAAATTCGTCAGTACAGTCAACAGGCCGAATCTCTTTTACATGGTAAGGGAGAAGTCATCTGTTAGCAAGGTAGTGATTGATCAAATAGCTGAATTTGTACAAGAATCTTATCCTAACAATGAATCTGGGATAATATACTGCTTTTCCCGAAAGGAGTGTGAGCAGGTTGCAAAGGAGTTACGTGTGAGGGGTATTTCTGCTGACCATTATCATGCTGACATGGATTCTGTTGCGCGTGAGAAAATTCATATGCGGTGGAGCAATTCTAGGTTGCAGGTTATTGTTGGCACGGAAAGTGGACGAGCTGGACGGGATGGGCTTCCATCTGAATGCCTACTTTACTACAGGCCTGGTGATGTCCCAAGACAAAGTTCAATGGTATTTTATGAGAACTCTGGATTGGAGAATCTCTATGGTATTGTTCAATATTGTCAGTCCAGAAGACAATGTCGCCGCAGTGCCTTTTTCCGACATTTCGCTGAGCCATTAAAAGACTGCAATGGGATGTGCGATACGTGTGCAGTTGCCAGCGAGGTTAAGGAATTGGATGTCTGTAGTATTGTTGTCTTCTACCTCCGAGGCTCTACTGGCTGGCTGAACTTCCCAGAATTGATGTTTGAAGAGGACCAGCTTCATGACATGTCGGCTGCCTCCACATGGAAACAAGCACCGCAGTTGGTGCTTGAATTTATGGCCACGGCAGATTCCTAG

Coding sequence (CDS)

ATGAACACTGAAGAAGTTTTAGAGGAGCTTCTCAACGTAGAAGTGCAGATAAACGAAGTCCAAGCTGAAATAAATGTACTTCTGGAACGCCAAGACAACTTGTACCAAAGAAAATCCGAGCTGCAGTCTTTGTTAGAACTCTGCAAAGAAACAGATGATTCAGTTAGTCAGGGTACAGGCACTTCTACGAATTCAGAAAATTGGTCTGGTTCATTTAAATGGGATTCTGACGCGGACGACGTTAAGTTGAACATCTTTGGCATATCCTCATATCGTGCAAACCAGCGAGAGATTGTCAATGCTGTCATGAGTGGGCGAGATGCTTTGGTGATTATGGCTGCTGGAGGTGGGAAGAGTCTTTGTTACCAGCTACCAGCTCTTCTATATGATGGCCTTGCTCTGGTTGTCAGTCCCTTGCTTTCTTTAATTCAGGATCAGGTTATGGGTTTGGCTGCTTTAGGAATTTCAGCATCTATGCTTACATCCGCAACTAGTAAAGATGACGAGAAGTTCATATACAAGAATCTTGAAAAGGGTGAAGGGAGTATAAAAATATTATATGTCACACCAGAAAAAATATCAAAGAGCAAAAGATTTATGTCTAAACTTGAAAAGTGCTATCATGCTGGTCGTCTTTCTCTTATTGCAATTGACGAGGCTCATTGCTGTAGTCAGTGGGGCCACGACTTTCGACCTGACTACAAGAATCTTGGTATTCTGAAGACTCAGTTTCCAAATGCTCCTGTGATTGCTTTGACTGCAACTGCCACTCAGAGGGTTCAAAATGATCTGGTTGAAATGCTTCGCATCCCCAAATATGTCAAATTCGTCAGTACAGTCAACAGGCCGAATCTCTTTTACATGGTAAGGGAGAAGTCATCTGTTAGCAAGGTAGTGATTGATCAAATAGCTGAATTTGTACAAGAATCTTATCCTAACAATGAATCTGGGATAATATACTGCTTTTCCCGAAAGGAGTGTGAGCAGGTTGCAAAGGAGTTACGTGTGAGGGGTATTTCTGCTGACCATTATCATGCTGACATGGATTCTGTTGCGCGTGAGAAAATTCATATGCGGTGGAGCAATTCTAGGTTGCAGGTTATTGTTGGCACGGAAAGTGGACGAGCTGGACGGGATGGGCTTCCATCTGAATGCCTACTTTACTACAGGCCTGGTGATGTCCCAAGACAAAGTTCAATGGTATTTTATGAGAACTCTGGATTGGAGAATCTCTATGGTATTGTTCAATATTGTCAGTCCAGAAGACAATGTCGCCGCAGTGCCTTTTTCCGACATTTCGCTGAGCCATTAAAAGACTGCAATGGGATGTGCGATACGTGTGCAGTTGCCAGCGAGGTTAAGGAATTGGATGTCTGTAGTATTGTTGTCTTCTACCTCCGAGGCTCTACTGGCTGGCTGAACTTCCCAGAATTGATGTTTGAAGAGGACCAGCTTCATGACATGTCGGCTGCCTCCACATGGAAACAAGCACCGCAGTTGGTGCTTGAATTTATGGCCACGGCAGATTCCTAG

Protein sequence

MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQVIVGTESGRAGRDGLPSECLLYYRPGDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVASEVKELDVCSIVVFYLRGSTGWLNFPELMFEEDQLHDMSAASTWKQAPQLVLEFMATADS

Homology

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BLAST of LsiUNG000930 vs. Swiss-Prot
Match: MED34_ARATH (Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana GN=MED34 PE=1 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 1.9e-193
Identity = 334/490 (68.16%), Postives = 401/490 (81.84%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M +E + E+L N++V++ +VQ +I+ L+E QD LY+RKSEL++LL+    +   V+   G
Sbjct: 1   MESEAIQEDLQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAASGSPVASSGG 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           +S   ENWS +F+WDS ADDV+ N+FGIS YRANQ+EI+NA+M+GRD LVIMAAGGGKSL
Sbjct: 61  SSA-IENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA+L  G  LVVSPLLSLIQDQVMGLAALGISA MLTS + K++EKF+YK LEKGE
Sbjct: 121 CYQLPAMLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
             +KILYVTPEK+SKSKRFMSKLEKC++AGRLSLI+IDEAHCCSQWGHDFRPDYKNL IL
Sbjct: 181 DDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFP  P++ALTATATQ+VQNDL+EML IPK VKFVS+VNRPNLFY VREKS+V K+V+
Sbjct: 241 KTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVV 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF++ESY NNESGI+YCFSRKECEQ+A +LR RGISAD+YHADMD+  REK+HMRW
Sbjct: 301 DEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           S ++LQVIVGT                             ESGRAGRDGLPSEC+L++R 
Sbjct: 361 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRS 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 462
            DVPRQSSMVFYE SGL+NLY IV+YCQS+ +CRRSAFFRHF EP +DCNGMCD CA++S
Sbjct: 421 ADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALSS 480

[Close]

BLAST of LsiUNG000930 vs. Swiss-Prot
Match: RECQ1_RAT (ATP-dependent DNA helicase Q1 OS=Rattus norvegicus GN=Recql PE=1 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.4e-100
Identity = 211/500 (42.20%), Postives = 293/500 (58.60%), Query Frame = 1


Query: 8   EELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG-TSTNSE 67
           +EL +V  +++ V  +I  L ERQ  L QRKS L   ++ C E  DS ++ +G   T+  
Sbjct: 9   DELESVSSELHAVDIQIQELTERQHELLQRKSVLTKRIKQCLE--DSAAEASGDCDTSPA 68

Query: 68  NWS-GSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLP 127
            WS   F W      V  ++F +  +R  Q E VNA M+ +D  ++M  GGGKSLCYQLP
Sbjct: 69  AWSKEDFPWSGKVKHVLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLP 128

Query: 128 ALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKI 187
           AL  DG  LV+ PL+SL++DQ+M L  LGISA+ML S++SK+  K ++  +      +K+
Sbjct: 129 ALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHLKL 188

Query: 188 LYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFP 247
           +YVTPEKI+KSK FMS+LEK Y AGRL+ +A+DE HCCSQWGHDFRPDYK LGILK QFP
Sbjct: 189 IYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFP 248

Query: 248 NAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAE 307
           N  +I LTATAT  V  D  ++L + K + F ++ NRPNL+Y VR+K S ++  I+ IA 
Sbjct: 249 NISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENIAN 308

Query: 308 FVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRL 367
            +   Y   +SGIIYCFS+K+ EQV   L+  G+ A  YHA+M+   R K+H +WS + L
Sbjct: 309 LINGRY-KGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSANEL 368

Query: 368 QVIVGTESGRAGRD----------GLPSECLLYYRP-------------------GDVPR 427
           QV+V T +   G D           +      YY+                    GD+ R
Sbjct: 369 QVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFR 428

Query: 428 QSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAE--PLKDCNGMCDTCAVASEVK 472
            SSMV  EN G + LY +V YCQ+  +CRR+   +HF E      CN MCD C      +
Sbjct: 429 ISSMVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNCCKDDSFE 488

[Close]

BLAST of LsiUNG000930 vs. Swiss-Prot
Match: RECQ1_PONAB (ATP-dependent DNA helicase Q1 OS=Pongo abelii GN=RECQL PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 3.0e-98
Identity = 199/482 (41.29%), Postives = 280/482 (58.09%), Query Frame = 1


Query: 8   EELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTNSEN 67
           EEL ++  +++ V+ +I  L ERQ+ L Q+K  L   ++ C E  D+ +     S+ +  
Sbjct: 9   EELDSITSELHAVEIQIQELTERQEELIQKKKVLTKKIKQCLEDSDAGASNEYDSSPAAW 68

Query: 68  WSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPAL 127
               F W     DV  N+F +  +R  Q E +N  M+G++  ++M  GGGK LCYQLPAL
Sbjct: 69  NKEDFPWSGKVKDVLQNVFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKGLCYQLPAL 128

Query: 128 LYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILY 187
             DG  LV+ PL+SL++DQ+M L  LGISA+ML +++SK+  K+++  +      +K++Y
Sbjct: 129 CSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLIY 188

Query: 188 VTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNA 247
           VTPEKI+KSK FMS+LEK Y A R + IA+DE HCCSQWGHDFRPDYK LGILK QFPNA
Sbjct: 189 VTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNA 248

Query: 248 PVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFV 307
            +I LTATAT  V  D  ++L I K   F ++ NRPNL+Y VR+K S ++  I+ I + +
Sbjct: 249 SLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLI 308

Query: 308 QESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQV 367
              Y   +SGIIYCFS+K+ EQV   LR  GI A  YHA+++   +  +H +WS + +QV
Sbjct: 309 NGRY-KGQSGIIYCFSQKDSEQVTVSLRNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 368

Query: 368 IVGTESGRAGRD----------GLPSECLLYYRP-------------------GDVPRQS 427
           +V T +   G D           +      YY+                    GD+ R S
Sbjct: 369 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 428

Query: 428 SMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKD--CNGMCDTCAVASEVKEL 459
           SMV  EN G + LY +V YCQ+  +CRR    +HF E      CN MCD C   S  +  
Sbjct: 429 SMVVMENVGQQKLYEMVSYCQNISKCRRLLMAQHFDEVWNSEACNKMCDNCCKDSAFERK 488

[Close]

BLAST of LsiUNG000930 vs. Swiss-Prot
Match: RECQ1_CAEEL (Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans GN=K02F3.12 PE=3 SV=3)

HSP 1 Score: 360.5 bits (924), Expect = 3.0e-98
Identity = 197/471 (41.83%), Postives = 276/471 (58.60%), Query Frame = 1


Query: 9   ELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTNSENW 68
           EL +++ +I ++  +I+ L  ++  L Q++  ++  +EL    D  V         ++ W
Sbjct: 35  ELADLDGEIGQIDQQISQLRRKKSELTQKRQAIERKIELKTNEDSDVV--------TDRW 94

Query: 69  S-GSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPAL 128
               F W  +A  +    F +  +R  QR  +NAVMS  DA+VI++ GGGKSLCYQLPAL
Sbjct: 95  DRDGFPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 154

Query: 129 LYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILY 188
           L +GLALVVSPL+SL++DQ++ L +LGI +S L + TSK++ K +   +   +   ++LY
Sbjct: 155 LANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLLY 214

Query: 189 VTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNA 248
           VTPEK++KSK+ M+KLEK    G L LIAIDE HCCSQWGHDFR DY  L +LK QF   
Sbjct: 215 VTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGHDFRTDYSFLNVLKRQFKGV 274

Query: 249 PVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFV 308
           P++ LTATAT  V +D+ +ML I   + F +  NR NL Y V +K        ++IA+ +
Sbjct: 275 PILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKYKVVQKPGSEDECTEEIAKTI 334

Query: 309 QESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQV 368
           +  +   ++GIIYC SR +CE+VAK L+  GI A HYHA M+ V R   H  W + ++QV
Sbjct: 335 KRDFAG-QTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQV 394

Query: 369 IVGT-----------------------------ESGRAGRDGLPSECLLYYRPGDVPRQS 428
           IV T                             ESGRAGRDG P+ C+LYYR  D+ +QS
Sbjct: 395 IVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQS 454

Query: 429 SMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKD--CNGMCDTC 448
           SMV  E +G++NLY +V+Y      CRR     HF E  +   C   CDTC
Sbjct: 455 SMVQQERTGIQNLYNMVRYAADSSTCRRVKLAEHFEEAWEPSWCQKQCDTC 496

[Close]

BLAST of LsiUNG000930 vs. Swiss-Prot
Match: RECQ1_HUMAN (ATP-dependent DNA helicase Q1 OS=Homo sapiens GN=RECQL PE=1 SV=3)

HSP 1 Score: 359.4 bits (921), Expect = 6.6e-98
Identity = 198/482 (41.08%), Postives = 280/482 (58.09%), Query Frame = 1


Query: 8   EELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTNSEN 67
           EEL ++  +++ V+ +I  L ERQ  L Q+K  L   ++ C E  D+ +     S+ +  
Sbjct: 9   EELDSITSELHAVEIQIQELTERQQELIQKKKVLTKKIKQCLEDSDAGASNEYDSSPAAW 68

Query: 68  WSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPAL 127
               F W     D+  N+F +  +R  Q E +N  M+G++  ++M  GGGKSLCYQLPAL
Sbjct: 69  NKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPAL 128

Query: 128 LYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILY 187
             DG  LV+ PL+SL++DQ+M L  LGISA+ML +++SK+  K+++  +      +K++Y
Sbjct: 129 CSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLIY 188

Query: 188 VTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNA 247
           VTPEKI+KSK FMS+LEK Y A R + IA+DE HCCSQWGHDFRPDYK LGILK QFPNA
Sbjct: 189 VTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNA 248

Query: 248 PVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFV 307
            +I LTATAT  V  D  ++L I K   F ++ NRPNL+Y VR+K S ++  I+ I + +
Sbjct: 249 SLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLI 308

Query: 308 QESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQV 367
              Y   +SGIIYCFS+K+ EQV   L+  GI A  YHA+++   +  +H +WS + +QV
Sbjct: 309 NGRY-KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQV 368

Query: 368 IVGTESGRAGRD----------GLPSECLLYYRP-------------------GDVPRQS 427
           +V T +   G D           +      YY+                    GD+ R S
Sbjct: 369 VVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRIS 428

Query: 428 SMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKD--CNGMCDTCAVASEVKEL 459
           SMV  EN G + LY +V YCQ+  +CRR    +HF E      CN MCD C   S  +  
Sbjct: 429 SMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVWNSEACNKMCDNCCKDSAFERK 488

[Close]

BLAST of LsiUNG000930 vs. TrEMBL
Match: A0A0A0L974_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G636420 PE=4 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 1.3e-249
Identity = 443/489 (90.59%), Postives = 454/489 (92.84%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           MN EEVLEELLNVEVQINEVQAEIN+LLERQDNLYQRKSELQSLLELC ET+DSVSQGTG
Sbjct: 1   MNPEEVLEELLNVEVQINEVQAEINLLLERQDNLYQRKSELQSLLELCNETEDSVSQGTG 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           TSTNSENWSGSFKWDS+ADDVKLNIFGISSYRANQREIVNAVMSGRD LVIMAAGGGKSL
Sbjct: 61  TSTNSENWSGSFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPALLYDG+ALVVSPLLSLIQDQVMGLAALGISASMLTSATSK+DEK IYKNLEKGE
Sbjct: 121 CYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           GS+KILYVTPEK+SKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 181 GSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI
Sbjct: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           DQIAEF+QESYPNNESGIIYCFSRKECEQVAKELR+RGISADHYHADMDSVAREK+HMRW
Sbjct: 301 DQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SNSRLQVIVGT                             ESGRAGRDGLPSECLLYYRP
Sbjct: 361 SNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 461
           GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRS FFRHFAEPLKDCNGMCD CAVAS
Sbjct: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEPLKDCNGMCDLCAVAS 480

[Close]

BLAST of LsiUNG000930 vs. TrEMBL
Match: A0A151RUE2_CAJCA (ATP-dependent DNA helicase Q1 OS=Cajanus cajan GN=KK1_032308 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 2.6e-210
Identity = 367/487 (75.36%), Postives = 420/487 (86.24%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M   E+LEELLN+EV+I +VQ +I  L+ERQ+NLY+RKSEL ++LE CKE+ +  +    
Sbjct: 1   MEDNEILEELLNIEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEANNVA- 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
            S+ +ENWSG+F+WDS+ADDV+LN+FGISSYRANQ+EI+NA+MSGRD LVIMAAGGGKSL
Sbjct: 61  -SSTAENWSGTFEWDSEADDVRLNVFGISSYRANQKEIINAIMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA++ DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS T+K DEKFIYK LEKGE
Sbjct: 121 CYQLPAVMRDGIALVVSPLLSLIQDQVMGLTALGIPAHMLTS-TNKGDEKFIYKALEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           G +K+LYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYK+LGIL
Sbjct: 181 GELKVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPN P++ALTATATQRVQNDL+EML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVI
Sbjct: 241 KTQFPNVPMVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF+QESYPNNESGI+YCFSRKECEQVAKELR RG+SAD+YHADMD   REK+HMRW
Sbjct: 301 DEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGVSADYYHADMDVNFREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SN++LQVIVGT                             ESGRAGRDGLPSECLLY+RP
Sbjct: 361 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 459
           GDVPRQSSMVFYEN+GL+NLY IV+YCQS+RQCRRSAFFRHFAEPL++CNGMCD CA AS
Sbjct: 421 GDVPRQSSMVFYENTGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFAS 480

[Close]

BLAST of LsiUNG000930 vs. TrEMBL
Match: A0A0B2PS18_GLYSO (ATP-dependent DNA helicase Q-like 2 OS=Glycine soja GN=glysoja_006268 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 1.9e-208
Identity = 366/487 (75.15%), Postives = 415/487 (85.22%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M   E+LEELLN+EV+I +VQ +I  L+ERQ++LY+RKSEL ++LE CKE+ +  +    
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEACKESGNEANNAA- 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
            S+ +ENWSG F+WDS+ADDV+LN+FGISSYRANQREI+NA+MSGRD LVIMAAGGGKSL
Sbjct: 61  -SSAAENWSGEFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA+L DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS T+K DEKFIYK LEKGE
Sbjct: 121 CYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKTLEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           G +KILYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYK+L IL
Sbjct: 181 GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLSIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFP  P++ALTATATQRVQNDL+EML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVI
Sbjct: 241 KTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF+QESYPNNESGI+YCFSRKECEQVAKELR RGISAD+YHADMD  AREK+HMRW
Sbjct: 301 DEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SN++LQVIVGT                             ESGRAGRDGLPSECLLY+RP
Sbjct: 361 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 459
           GD PRQSSMVFYENSGL+NLY IV+YC S+RQCRRSAFF HFAEPL++CNGMCD CA +S
Sbjct: 421 GDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEPLQECNGMCDICAFSS 480

[Close]

BLAST of LsiUNG000930 vs. TrEMBL
Match: K7LF92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G215200 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 1.9e-208
Identity = 366/487 (75.15%), Postives = 415/487 (85.22%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M   E+LEELLN+EV+I +VQ +I  L+ERQ++LY+RKSEL ++LE CKE+ +  +    
Sbjct: 1   MENNEILEELLNIEVEIQDVQEQIRALIERQESLYERKSELSAILEACKESGNEANNAA- 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
            S+ +ENWSG F+WDS+ADDV+LN+FGISSYRANQREI+NA+MSGRD LVIMAAGGGKSL
Sbjct: 61  -SSAAENWSGEFEWDSEADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA+L DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS T+K DEKFIYK LEKGE
Sbjct: 121 CYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKTLEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           G +KILYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYK+L IL
Sbjct: 181 GELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLSIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFP  P++ALTATATQRVQNDL+EML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVI
Sbjct: 241 KTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF+QESYPNNESGI+YCFSRKECEQVAKELR RGISAD+YHADMD  AREK+HMRW
Sbjct: 301 DEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYHADMDVNAREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SN++LQVIVGT                             ESGRAGRDGLPSECLLY+RP
Sbjct: 361 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 459
           GD PRQSSMVFYENSGL+NLY IV+YC S+RQCRRSAFF HFAEPL++CNGMCD CA +S
Sbjct: 421 GDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEPLQECNGMCDICAFSS 480

[Close]

BLAST of LsiUNG000930 vs. TrEMBL
Match: V7CL86_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G126800g PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 9.3e-208
Identity = 364/487 (74.74%), Postives = 417/487 (85.63%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M + E+LEELLNVEV+I +VQ +I  L+ERQ+NLY+RKSEL ++LE CKE+ +  S    
Sbjct: 1   MESNEILEELLNVEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEASNVAS 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           ++   E+WSG+F WDS ADDV+LN+FGISSYRANQREI+NA+MSGRD LVIMAAGGGKSL
Sbjct: 61  SAV--EDWSGTFGWDSRADDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA+L DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS T+K DEKFIYK LEKGE
Sbjct: 121 CYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAYMLTS-TNKGDEKFIYKALEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           G +K+LYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYK+LGIL
Sbjct: 181 GDLKVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPN P++ALTATATQRVQNDL EML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVI
Sbjct: 241 KTQFPNVPMVALTATATQRVQNDLTEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IA+F+QESYPNN+SGI+YCFSRKECEQVAKELR R ISAD+YHADMD +AR+K+HMRW
Sbjct: 301 DEIAQFIQESYPNNKSGIVYCFSRKECEQVAKELRERRISADYYHADMDVIARQKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SN++LQVIVGT                             ESGRAGRDGLPSEC+LY+RP
Sbjct: 361 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYFRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 459
           GDVPRQSSMVFYENSGL+NLY IV+YCQS++QCRRSAFFRHFAEPL++CNGMCD CA + 
Sbjct: 421 GDVPRQSSMVFYENSGLQNLYDIVRYCQSKKQCRRSAFFRHFAEPLQECNGMCDICAFSR 480

[Close]

BLAST of LsiUNG000930 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-194
Identity = 334/490 (68.16%), Postives = 401/490 (81.84%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M +E + E+L N++V++ +VQ +I+ L+E QD LY+RKSEL++LL+    +   V+   G
Sbjct: 1   MESEAIQEDLQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAASGSPVASSGG 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           +S   ENWS +F+WDS ADDV+ N+FGIS YRANQ+EI+NA+M+GRD LVIMAAGGGKSL
Sbjct: 61  SSA-IENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA+L  G  LVVSPLLSLIQDQVMGLAALGISA MLTS + K++EKF+YK LEKGE
Sbjct: 121 CYQLPAMLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
             +KILYVTPEK+SKSKRFMSKLEKC++AGRLSLI+IDEAHCCSQWGHDFRPDYKNL IL
Sbjct: 181 DDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFP  P++ALTATATQ+VQNDL+EML IPK VKFVS+VNRPNLFY VREKS+V K+V+
Sbjct: 241 KTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVV 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF++ESY NNESGI+YCFSRKECEQ+A +LR RGISAD+YHADMD+  REK+HMRW
Sbjct: 301 DEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           S ++LQVIVGT                             ESGRAGRDGLPSEC+L++R 
Sbjct: 361 SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRS 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 462
            DVPRQSSMVFYE SGL+NLY IV+YCQS+ +CRRSAFFRHF EP +DCNGMCD CA++S
Sbjct: 421 ADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCNGMCDNCALSS 480

[Close]

BLAST of LsiUNG000930 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 305.4 bits (781), Expect = 6.4e-83
Identity = 180/452 (39.82%), Postives = 243/452 (53.76%), Query Frame = 1


Query: 63  TNSENWSG-SFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLC 122
           +N + WS   F W    +     +FG  S+R NQREI+NA MSG D  V+M  GGGKSL 
Sbjct: 425 SNDKKWSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLT 484

Query: 123 YQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEG 182
           YQLPAL+  G+ LV+SPL+SLIQDQ+M L    I A+ L++     ++  I++ L     
Sbjct: 485 YQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHS 544

Query: 183 SIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILK 242
             K+LYVTPEK++KS   +  LE     G L+   IDEAHC SQWGHDFRPDY++LGILK
Sbjct: 545 KYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILK 604

Query: 243 TQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVID 302
            +FPN PV+ALTATAT  V+ D+V+ L +   V F  + NRPNL+Y V  K+   K  ++
Sbjct: 605 QKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT---KKCLE 664

Query: 303 QIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWS 362
            I +F++E++  +E GIIYC SR +CE+V++ L+  G  A  YH  M+   R  I  +WS
Sbjct: 665 DIDKFIKENH-FDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWS 724

Query: 363 NSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRPG 422
              + +I  T                             E GRAGRDG  S C+LYY  G
Sbjct: 725 KDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYG 784

Query: 423 DVPR-----------QSSMVFYEN----------SGLENLYGIVQYCQSRRQCRRSAFFR 462
           D  R           QS M    N          +  ENL  +V+YC++  +CRR     
Sbjct: 785 DYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRFLQLV 844

[Close]

BLAST of LsiUNG000930 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 302.4 bits (773), Expect = 5.4e-82
Identity = 186/486 (38.27%), Postives = 253/486 (52.06%), Query Frame = 1


Query: 29  ERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTNSENWSGS-FKWDSDADDVKLNIFG 88
           ER D     +   QS+ E+   TD         S+N + W+ S F W  + +     +FG
Sbjct: 414 ERYDISSGSEEREQSVSEVIDVTDTE-------SSNDKKWTSSDFPWTKNLEVYNKLVFG 473

Query: 89  ISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPALLYDGLALVVSPLLSLIQDQV 148
             S+R NQREI+NA MSG D  V+M  GGGKSL YQLPALL  G+ LV+SPL+SLIQDQ+
Sbjct: 474 NHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQI 533

Query: 149 MGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILYVTPEKISKSKRFMSKLEKCY 208
           M L    ISA+ L++     ++  I + L   +   K+LYVTPEK++KS+  +  LE   
Sbjct: 534 MNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILN 593

Query: 209 HAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNAPVIALTATATQRVQNDLVEM 268
               L+   IDEAHC SQWGHDFRPDY+ LG+LK +FPN P++ALTATAT  V+ D+V+ 
Sbjct: 594 SRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQA 653

Query: 269 LRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFVQESYPNNESGIIYCFSRKEC 328
           L +   V F  + NRPNL+Y V  K++     ++ I +F++E++  +E GIIYC SR +C
Sbjct: 654 LGLVNCVVFRQSFNRPNLWYSVVPKTNKC---LEDIDKFIRENH-FDECGIIYCLSRMDC 713

Query: 329 EQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQVIVGT---------------- 388
           E+V + LRV G  A  YH  MD   R  +  +WS   + +I  T                
Sbjct: 714 EKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVI 773

Query: 389 -------------ESGRAGRDGLPSECLLYYRPGDVPRQSSMVFYENSG----------- 448
                        E GRAGRDG  S C+LYY   D  R   M+     G           
Sbjct: 774 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCK 833

Query: 449 ----------LENLYGIVQYCQSRRQCRRSAFFRHFAEPL--KDCNGMCDTCAVASEVKE 462
                      ENL  +V YC++   CRR     H  E     +C   CD C+ +  + +
Sbjct: 834 ASSGRMLETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKILID 888

[Close]

BLAST of LsiUNG000930 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 265.0 bits (676), Expect = 9.5e-71
Identity = 157/409 (38.39%), Postives = 220/409 (53.79%), Query Frame = 1


Query: 86  FGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQLPALLYDGLALVVSPLLSLIQD 145
           FG + +R  Q E + AV+SGRD   +M  GGGKS+CYQ+PAL   G+ LVVSPL++L+++
Sbjct: 32  FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMEN 91

Query: 146 QVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIKILYVTPEKISKSKRFMSKLEK 205
           QVM L   GI+A  L+S  +   +  I+++L+ G+ S+++LYVTPE I+ +K FM KL K
Sbjct: 92  QVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIA-TKGFMLKLRK 151

Query: 206 CYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPNAPVIALTATATQRVQNDLV 265
            +  G L+LIAIDEAHC S WGHDFRP Y+ L  L+    + PV+ALTATA  +VQ D++
Sbjct: 152 LHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVI 211

Query: 266 EMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIAEFVQESYPNNESGIIYCFSRK 325
           + L +   +   S+ NRPN+FY VR K  +     D +   ++     N   IIYC  R 
Sbjct: 212 DSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTD-LGNLLKSC--GNICAIIYCLERT 271

Query: 326 ECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSRLQVIVGT-------------- 385
            C+ ++  L   GIS+  YHA ++S  R  +   W +S+ Q+IV T              
Sbjct: 272 TCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRM 331

Query: 386 ---------------ESGRAGRDGLPSECLLYYRPGDVPRQSSMVFYENS---------- 445
                          ESGRAGRD LPS  +LYY   D  R+       NS          
Sbjct: 332 VCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDD--RKKMEYLLRNSENKKSSSSKK 391

Query: 446 GLENLYGIVQYCQSRRQCRRSAFFRHFAE--PLKDCNGMCDTCAVASEV 454
              +   IV YC+    CRR      F E  P++ C   CD C   ++V
Sbjct: 392 PTSDFEQIVTYCEG-SGCRRKKILESFGEEFPVQQCKKTCDACKHPNQV 433

[Close]

BLAST of LsiUNG000930 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 225.7 bits (574), Expect = 6.4e-59
Identity = 138/377 (36.60%), Postives = 208/377 (55.17%), Query Frame = 1


Query: 52  DDSVSQGTGTS-----TNSENWSGSFKWDSDADDVK---LNIFGISSYRANQREIVNAVM 111
           +DSVS  +G       +N ++ + S++     DD++   L IFG   +R  Q +   A M
Sbjct: 160 EDSVSTISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASM 219

Query: 112 SGRDALVIMAAGGGKSLCYQLPALLYDGLALVVSPLLSLIQDQVMGL-AALGISASMLTS 171
             +D  V+M  GGGKSLCYQLPA L  G+ +V+SPLLSLIQDQ++ L    GI A+ L S
Sbjct: 220 ERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNS 279

Query: 172 ATSKDDEKFIYKNLEKGEGSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHC 231
             +      + + L +   S K+LYVTPEKI+ S  F+  L      G L+   +DEAHC
Sbjct: 280 QQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHC 339

Query: 232 CSQWGHDFRPDYKNLGILKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNR 291
            SQWGHDFRPDY+ LG LK  FP  PV+ALTATAT+ V  D+++ LRIP+      + +R
Sbjct: 340 VSQWGHDFRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDR 399

Query: 292 PNLFYMVREKSSVSKVVIDQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVR-GISA 351
            NL Y V  K   +K  + Q+ E +++ +  ++SGI+YC S+ EC  VAK L  +  +  
Sbjct: 400 INLKYEVIVK---TKEPLKQLQELLRDRF-KDQSGIVYCLSKSECVDVAKFLNEKCKVKT 459

Query: 352 DHYHADMDSVAREKIHMRWSNSRLQVIVGTESGRAGRDGLPSECLLYYRPGDVPRQSSMV 411
            +YHA + +  R  +  +W    ++++  T +   G D      +++    +   ++   
Sbjct: 460 VYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIH----NTLSKAVES 519

Query: 412 FYENSGLENLYGIVQYC 419
           +Y+ SG     G+   C
Sbjct: 520 YYQESGRAGRDGLQAQC 528

[Close]

BLAST of LsiUNG000930 vs. NCBI nr
Match: gi|659120913|ref|XP_008460413.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cucumis melo])

HSP 1 Score: 877.9 bits (2267), Expect = 8.8e-252
Identity = 447/489 (91.41%), Postives = 457/489 (93.46%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           MNTEEVLEELLNVE+QINEVQAEINVLLERQDNLYQRKSELQSLLELCKET+DSVSQGTG
Sbjct: 1   MNTEEVLEELLNVELQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETEDSVSQGTG 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           TSTNSENWSGSFKWDS+ADD+KLNIFGISSYRANQREIVNAVMSGRD LVIMAAGGGKSL
Sbjct: 61  TSTNSENWSGSFKWDSEADDIKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPALLYDG+ALVVSPLLSLIQDQVMGLAALGISASMLTSATSK+DEKFIYKNLEKGE
Sbjct: 121 CYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKFIYKNLEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           GS+KILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 181 GSMKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI
Sbjct: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           DQIAEF+QESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREK+HMRW
Sbjct: 301 DQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SNSRLQVIVGT                             ESGRAGRDGLPSECLLYYRP
Sbjct: 361 SNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 461
           GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRS FFRHFAEPLKDCNGMCD CAVAS
Sbjct: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEPLKDCNGMCDLCAVAS 480

[Close]

BLAST of LsiUNG000930 vs. NCBI nr
Match: gi|778682244|ref|XP_011651674.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Cucumis sativus])

HSP 1 Score: 870.2 bits (2247), Expect = 1.8e-249
Identity = 443/489 (90.59%), Postives = 454/489 (92.84%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           MN EEVLEELLNVEVQINEVQAEIN+LLERQDNLYQRKSELQSLLELC ET+DSVSQGTG
Sbjct: 1   MNPEEVLEELLNVEVQINEVQAEINLLLERQDNLYQRKSELQSLLELCNETEDSVSQGTG 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
           TSTNSENWSGSFKWDS+ADDVKLNIFGISSYRANQREIVNAVMSGRD LVIMAAGGGKSL
Sbjct: 61  TSTNSENWSGSFKWDSEADDVKLNIFGISSYRANQREIVNAVMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPALLYDG+ALVVSPLLSLIQDQVMGLAALGISASMLTSATSK+DEK IYKNLEKGE
Sbjct: 121 CYQLPALLYDGIALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKLIYKNLEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           GS+KILYVTPEK+SKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL
Sbjct: 181 GSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI
Sbjct: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           DQIAEF+QESYPNNESGIIYCFSRKECEQVAKELR+RGISADHYHADMDSVAREK+HMRW
Sbjct: 301 DQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYHADMDSVAREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SNSRLQVIVGT                             ESGRAGRDGLPSECLLYYRP
Sbjct: 361 SNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 461
           GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRS FFRHFAEPLKDCNGMCD CAVAS
Sbjct: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEPLKDCNGMCDLCAVAS 480

[Close]

BLAST of LsiUNG000930 vs. NCBI nr
Match: gi|1012334791|gb|KYP46141.1| (ATP-dependent DNA helicase Q1 [Cajanus cajan])

HSP 1 Score: 739.6 bits (1908), Expect = 3.7e-210
Identity = 367/487 (75.36%), Postives = 420/487 (86.24%), Query Frame = 1


Query: 1   MNTEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTG 60
           M   E+LEELLN+EV+I +VQ +I  L+ERQ+NLY+RKSEL ++LE CKE+ +  +    
Sbjct: 1   MEDNEILEELLNIEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEANNVA- 60

Query: 61  TSTNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSL 120
            S+ +ENWSG+F+WDS+ADDV+LN+FGISSYRANQ+EI+NA+MSGRD LVIMAAGGGKSL
Sbjct: 61  -SSTAENWSGTFEWDSEADDVRLNVFGISSYRANQKEIINAIMSGRDVLVIMAAGGGKSL 120

Query: 121 CYQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGE 180
           CYQLPA++ DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS T+K DEKFIYK LEKGE
Sbjct: 121 CYQLPAVMRDGIALVVSPLLSLIQDQVMGLTALGIPAHMLTS-TNKGDEKFIYKALEKGE 180

Query: 181 GSIKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGIL 240
           G +K+LYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYK+LGIL
Sbjct: 181 GELKVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGIL 240

Query: 241 KTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVI 300
           KTQFPN P++ALTATATQRVQNDL+EML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVI
Sbjct: 241 KTQFPNVPMVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVI 300

Query: 301 DQIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRW 360
           D+IAEF+QESYPNNESGI+YCFSRKECEQVAKELR RG+SAD+YHADMD   REK+HMRW
Sbjct: 301 DEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGVSADYYHADMDVNFREKVHMRW 360

Query: 361 SNSRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRP 420
           SN++LQVIVGT                             ESGRAGRDGLPSECLLY+RP
Sbjct: 361 SNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRP 420

Query: 421 GDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVAS 459
           GDVPRQSSMVFYEN+GL+NLY IV+YCQS+RQCRRSAFFRHFAEPL++CNGMCD CA AS
Sbjct: 421 GDVPRQSSMVFYENTGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNGMCDICAFAS 480

[Close]

BLAST of LsiUNG000930 vs. NCBI nr
Match: gi|1021515601|ref|XP_016201261.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Arachis ipaensis])

HSP 1 Score: 734.2 bits (1894), Expect = 1.6e-208
Identity = 366/485 (75.46%), Postives = 415/485 (85.57%), Query Frame = 1


Query: 3   TEEVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTS 62
           T EVL+ELL VEV I +VQ +I VL+ERQ+ LY++KSEL ++LE C+E+ + V+ G   S
Sbjct: 6   TNEVLQELLKVEVDIQDVQEQIRVLVERQEKLYEKKSELSAILEACRESGNEVNNGASIS 65

Query: 63  TNSENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCY 122
              ENWSG F+WDS ADD++LNIFGISSYRANQREI+NA+MSGRD LVIMAAGGGKSLCY
Sbjct: 66  V--ENWSGEFQWDSQADDLRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCY 125

Query: 123 QLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGS 182
           QLPA+L DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS TSK+DEKFIYK LEKGEG 
Sbjct: 126 QLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAHMLTSTTSKEDEKFIYKALEKGEGE 185

Query: 183 IKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKT 242
           +KILYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGILKT
Sbjct: 186 LKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT 245

Query: 243 QFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQ 302
           QFPN P++ALTATATQRVQNDL++ML IP+ VKFVSTVNRPNLFYMV+EKSSV KVVID+
Sbjct: 246 QFPNVPMVALTATATQRVQNDLMDMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVVIDE 305

Query: 303 IAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSN 362
           IAEF++ESYPNNESGI+YCFSRKECEQVAKELR RGI A++YHADMD  AREK+HM WS+
Sbjct: 306 IAEFIKESYPNNESGIVYCFSRKECEQVAKELRERGIKANYYHADMDVNAREKVHMWWSS 365

Query: 363 SRLQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRPGD 422
           ++LQVIVGT                             ESGRAGRDGLPSECLLY+RP D
Sbjct: 366 NKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPAD 425

Query: 423 VPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVASEV 459
           VPRQSSMVFYENSGL+NLY IV+YCQS+RQCRR+AFFRHFAEPL++CNGMCD CA +SEV
Sbjct: 426 VPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRAAFFRHFAEPLQECNGMCDNCAFSSEV 485

[Close]

BLAST of LsiUNG000930 vs. NCBI nr
Match: gi|502162030|ref|XP_004512366.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Cicer arietinum])

HSP 1 Score: 733.8 bits (1893), Expect = 2.1e-208
Identity = 367/483 (75.98%), Postives = 415/483 (85.92%), Query Frame = 1


Query: 5   EVLEELLNVEVQINEVQAEINVLLERQDNLYQRKSELQSLLELCKETDDSVSQGTGTSTN 64
           EVLEEL NVE +I +VQ +I  L+E+Q+ LY+RKSEL S+LE CKE+++ V+    +ST 
Sbjct: 6   EVLEELHNVEAEIEDVQEQIRALIEKQERLYERKSELNSILEACKESENQVNNNASSST- 65

Query: 65  SENWSGSFKWDSDADDVKLNIFGISSYRANQREIVNAVMSGRDALVIMAAGGGKSLCYQL 124
            ENW+  F+WDS ADD++LNIFGISSYRANQREI+NA+MSGRD LVIMAAGGGKSLCYQL
Sbjct: 66  VENWNAPFEWDSKADDLRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQL 125

Query: 125 PALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKDDEKFIYKNLEKGEGSIK 184
           PA+L DG+ALVVSPLLSLIQDQVMGL ALGI A MLTS TSK++EKFIYK LEKGEG +K
Sbjct: 126 PAVLRDGVALVVSPLLSLIQDQVMGLTALGIPAHMLTSTTSKENEKFIYKALEKGEGELK 185

Query: 185 ILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQF 244
           ILYVTPEKISKSKRFMSKLEKC+HAGRLSLI+IDEAHCCSQWGHDFRPDYKNLGILKTQF
Sbjct: 186 ILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQF 245

Query: 245 PNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVIDQIA 304
           PN P++ALTATATQRVQNDL+EML I + VKFVSTVNRPNLFYMV+EKSSVSKVV+D+IA
Sbjct: 246 PNVPMVALTATATQRVQNDLIEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIA 305

Query: 305 EFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKIHMRWSNSR 364
           EF+QESYPN+ESGI+YCFSRKECEQVAKELR RGISADHYHADMD   REK+HMRWSN++
Sbjct: 306 EFIQESYPNHESGIVYCFSRKECEQVAKELRERGISADHYHADMDVNNREKVHMRWSNNK 365

Query: 365 LQVIVGT-----------------------------ESGRAGRDGLPSECLLYYRPGDVP 424
           LQVIVGT                             ESGRAGRDGLPSECLLY+RPGDV 
Sbjct: 366 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVS 425

Query: 425 RQSSMVFYENSGLENLYGIVQYCQSRRQCRRSAFFRHFAEPLKDCNGMCDTCAVASEVKE 459
           RQSSMVFYENSGL+NLY IV+YCQS+RQCRRSAFFRHFAEPL++C+GMCD CA +SEVKE
Sbjct: 426 RQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECDGMCDICAFSSEVKE 485

The following BLAST results are available for this feature:

BLAST of LsiUNG000930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MED34_ARATH	1.9e-193	68.16	Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana G...	[more]
RECQ1_RAT	2.4e-100	42.20	ATP-dependent DNA helicase Q1 OS=Rattus norvegicus GN=Recql PE=1 SV=1	[more]
RECQ1_PONAB	3.0e-98	41.29	ATP-dependent DNA helicase Q1 OS=Pongo abelii GN=RECQL PE=2 SV=1	[more]
RECQ1_CAEEL	3.0e-98	41.83	Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans GN=K02F3.12 PE=...	[more]
RECQ1_HUMAN	6.6e-98	41.08	ATP-dependent DNA helicase Q1 OS=Homo sapiens GN=RECQL PE=1 SV=3	[more]

BLAST of LsiUNG000930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L974_CUCSA	1.3e-249	90.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G636420 PE=4 SV=1	[more]
A0A151RUE2_CAJCA	2.6e-210	75.36	ATP-dependent DNA helicase Q1 OS=Cajanus cajan GN=KK1_032308 PE=4 SV=1	[more]
A0A0B2PS18_GLYSO	1.9e-208	75.15	ATP-dependent DNA helicase Q-like 2 OS=Glycine soja GN=glysoja_006268 PE=4 SV=1	[more]
K7LF92_SOYBN	1.9e-208	75.15	Uncharacterized protein OS=Glycine max GN=GLYMA_09G215200 PE=4 SV=1	[more]
V7CL86_PHAVU	9.3e-208	74.74	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G126800g PE=4 SV=1	[more]

BLAST of LsiUNG000930 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31360.1	1.1e-194	68.16	RECQ helicase L2	[more]
AT1G10930.1	6.4e-83	39.82	DNA helicase (RECQl4A)	[more]
AT1G60930.1	5.4e-82	38.27	RECQ helicase L4B	[more]
AT4G35740.1	9.5e-71	38.39	DEAD/DEAH box RNA helicase family protein	[more]
AT3G05740.1	6.4e-59	36.60	RECQ helicase l1	[more]

BLAST of LsiUNG000930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120913\|ref\|XP_008460413.1\|	8.8e-252	91.41	PREDICTED: mediator of RNA polymerase II transcription subunit 34 isoform X1 [Cu...	[more]
gi\|778682244\|ref\|XP_011651674.1\|	1.8e-249	90.59	PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Cucumis sativ...	[more]
gi\|1012334791\|gb\|KYP46141.1\|	3.7e-210	75.36	ATP-dependent DNA helicase Q1 [Cajanus cajan]	[more]
gi\|1021515601\|ref\|XP_016201261.1\|	1.6e-208	75.46	PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Arachis ipaen...	[more]
gi\|502162030\|ref\|XP_004512366.1\|	2.1e-208	75.98	PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Cicer arietin...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding
GO:0008026	ATP-dependent helicase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006310	DNA recombination

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014001	Helicase_ATP-bd
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR011545	DEAD/DEAH_box_helicase_dom
IPR004589	DNA_helicase_ATP-dep_RecQ
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0045492	xylan biosynthetic process
biological_process	GO:0006396	RNA processing
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0006281	DNA repair
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005657	replication fork
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0009379	Holliday junction helicase complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043140	ATP-dependent 3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0009378	four-way junction helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
LsiUNG000930.1	LsiUNG000930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 299..457 score: 9
IPR004589	DNA helicase, ATP-dependent, RecQ type	TIGRFAMs	TIGR00614	TIGR00614	coord: 84..371 score: 9.8E
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 93..261 score: 2.2
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 404..458 score: 2.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 87..290 score: 1.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 99..274 score: 24
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 279..372 score: 2.3E-23coord: 373..396 score: 2.5E-5coord: 84..277 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 131..396 score: 3.45
None	No IPR available	unknown	Coil	Coil	coord: 3..37 scor
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 1..458 score: 6.7E
None	No IPR available	PANTHER	PTHR13710:SF72	ATP-DEPENDENT DNA HELICASE Q1	coord: 1..458 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
LsiUNG000930	Csa3G636420	Cucumber (Chinese Long) v2	culsiB149
LsiUNG000930	CSPI03G27890	Wild cucumber (PI 183967)	cpilsiB148
LsiUNG000930	Cucsa.149920	Cucumber (Gy14) v1	cgylsiB239
LsiUNG000930	CmaCh19G001880	Cucurbita maxima (Rimu)	cmalsiB463
LsiUNG000930	CmoCh19G002050	Cucurbita moschata (Rifu)	cmolsiB448
LsiUNG000930	Cla002224	Watermelon (97103) v1	lsiwmB003
LsiUNG000930	MELO3C022743	Melon (DHL92) v3.5.1	lsimeB003
LsiUNG000930	ClCG07G002430	Watermelon (Charleston Gray)	lsiwcgB005
LsiUNG000930	MELO3C022742.2	Melon (DHL92) v3.6.1	lsimedB003
LsiUNG000930	Cla97C07G130730	Watermelon (97103) v2	lsiwmbB004
LsiUNG000930	Bhi05G000020	Wax gourd	lsiwgoB003
LsiUNG000930	Cp4.1LG15g01600	Cucurbita pepo (Zucchini)	cpelsiB191
LsiUNG000930	CsGy3G025920	Cucumber (Gy14) v2	cgyblsiB135
LsiUNG000930	CsaV3_3G030270	Cucumber (Chinese Long) v3	cuclsiB162

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None