LsiUNG000890 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	LsiUNG000890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Kinesin-like protein
Location	chr00 : 2551613 .. 2554314 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGAAATTGAGCGAAGAAGATGGGGAAGAAAAGGGGTGGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCGCCGTTAACGCCTACTCCGGCCAGCGATTCTCCGAAGTCAGCGATCTTCAACAGAAAAATGAACAGCAATGGATGCAAATTTTCTTCACCAGAGAACACCAACATTGCGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCACCTTCTCGAAATACTTCGAGTTTGAGCACTATATCTGATCTCAAGGATTTTGCGTCTTCACAACTCCTTGATCTCAAGCGCCACATTGATCATTCTCACTCACAAATCGTCAAAGACCTCGATTCCTCAAACTCACGCCTCCAAAAGCGATTTAAGGTATCCTTCTCTCTTTTTATGATTTTAACGATTAACGATGAATGCGAGCTACTGCATCTACTTTTTTTTTCTCCTTTTTATTTTTCTTTGCGATTTCCGCTGATTAGAATCCTTAACTCGAGATTTCTCTCTGTTCGAAGAACATGAGCTCGATCAGAGGCAGTTAATTTAGTTCAGTCCATTTGAAATTAGTTCAAAAATCACTGGAAATTTGCATTCACTGTTCCGATACCGAAGATTCCATCGGGAAGCTGTGAAAATTTTAGGCAGGAGAGAGCAGTATAGTTCTCTCTTTCCGTGTTAAACGTAATACTGCCGTTGTATAAACCAAGATTTCCTTGGTGCTTTCATAACCATGCTTTTAAGCTTTTATACACGATTTTAGTTTAAAACTTGAAGTTAAATGAAAAACTACACGTCTGTACTAGTGAATTTCAGCTTCATAGATGTGATAGTTTCTATGATTTTAATATAAATTAGAACACACACGTGGAACATTTAAGGCTTAGATTATCCATGTAAAGTAGCTCAACATGAAGAGTTTCAATTGACCTTTATAAACATATTATAGGTTTGTATGTGTACTGATTGACTTTGTATGGACCAGCTAGGATATAAGATTAAGTAGTCGTCGCCATTACTGAAAATTTATCTAAGACAGAAGCATTTTCTTGGTTTCAATTCTCGATTTGTAACGGGAAGGATGAATAAGAAAATGATCTTGGAATGTCATGTCAATTATTTAACAGTTTCAAAATCAAGCATGCCAAAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTCATGAAAGTCAGGAAGCAATGAAGGTGCCTCAATGAAAAATCTAACTCGCAAAAGTGTTTACATGATTATTACTTTTTGTGCCAAAAAGCTCACTCTGTTTCGTTGTCTATTATTAGGCTTCATATGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCGCGAGGTTAGTCAATCTTGCAATGACATTGGTTAACTACGAATTGCTCTAAGATAATATTAATCAGTATAGATATTCTTCTGAAAATTGCATATTGTACTGGTTCTGGATGGCTTTTCATGATTTGATGTTCCATCAATGTCGATATCAAGGTTTCAATTCTACGGATATGTCTATGGATATTTTAATCATAATGTTTACATTGTTACCAGAAAAACCTTTTCATTGGTACAACTTTAGAGTTTATTTTTGAATATTTACATGGAACGATATATATTATTTTATATTTAAAAACTTGTCAATTACTACTTAGAACTAGAAGTCGGAACACTGAAAATATAATTTAAATTTTATAATAAAAAAATAAAATAAAATAAAGTTCGAATTCTTAAAATTATAGAGTTGGATTAAGAAGGTTCTGAAATCCTTTTTCCAGAATCTTCATAAGAACCAACCAACATATTTTTAGAACGTTTTTAAACATCATAGTTTCATAATGACATGAAGTTGACGTGATTTGCGGCTTTACCTATTTTCATTATTTCATTTTTGAAACTACCATATGAAATATGAAACCTTGGTTGTAACACTTTCTCATTAGCAGCTTGCAAAACATCCATAACTGAACTTTCGCAGTCGTTTGAGAGATCTATTGATGCTCTTCGTAGCCGTTTTGGGATCTCGTCCACCTAACCTCACTATGAATTAAAATCAGCTTCGTGGTGACTTGGTGAGTCTATTAATCTAATATAAGCACAACATGTTTAGAACTTCAACACCACAAAATAAGAACAGGCACTAAATGACTAATAATGATGGTTCCTTTCCACATTTCCTTGTTGTTCACCTGTTAAAATTTACAGTTCTTATAAAAGTGAACCTATGTAAGTCTATGATCCTGATATCTTTGAAGTACTTGTTTTTTAAGGAAACACGTTTCTTAAAGTTACATTGTTTGTAGTCTTTCTTTTCTGTGCATCTGTCCGTAGGTTCACATAAGTGCATTATTTCCTCGTAAAAATATATGCATTTTCTTCTCCACGCAATTCTCAGTTCAGTGTGGTTGTTCAGAAGCTCTAGAAAATCGGGGATCTTTGTTGAATTAGCCAAGCGATTGAACAGAGTCTTTAATTCCAAGAATTCTGTTCATTGCTTGTTATATTTTTTAGTCAAATAAAAACTATGTCTTCTCTTATTAGTGCAAACTAACCTCTCCTTTTCTTTTCTTTTTTTTTTTTTTTCCCTTTTTTCCCCCTTTTTTGTGTTGTGTTTTAATTTTTCAGAGGAATAACTGTATATGACATCATGTGGTTCTCAAGAATATCTTTACTCAAGTAAGTTTA

mRNA sequence

GACTGAAATTGAGCGAAGAAGATGGGGAAGAAAAGGGGTGGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCGCCGTTAACGCCTACTCCGGCCAGCGATTCTCCGAAGTCAGCGATCTTCAACAGAAAAATGAACAGCAATGGATGCAAATTTTCTTCACCAGAGAACACCAACATTGCGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCACCTTCTCGAAATACTTCGAGTTTGAGCACTATATCTGATCTCAAGGATTTTGCGTCTTCACAACTCCTTGATCTCAAGCGCCACATTGATCATTCTCACTCACAAATCGTCAAAGACCTCGATTCCTCAAACTCACGCCTCCAAAAGCGATTTAAGTTTCAAAATCAAGCATGCCAAAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTCATGAAAGTCAGGAAGCAATGAAGGCTTCATATGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCGCGAGCTTGCAAAACATCCATAACTGAACTTTCGCAGTCGTTTGAGAGATCTATTGATGCTCTTCGTAGCCGTTTTGGGATCTCGTCCACCTAACCTCACTATGAATTAAAATCAGCTTCGTGGTGACTTGAGGAATAACTGTATATGACATCATGTGGTTCTCAAGAATATCTTTACTCAAGTAAGTTTA

Coding sequence (CDS)

ATGGGGAAGAAAAGGGGTGGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCGCCGTTAACGCCTACTCCGGCCAGCGATTCTCCGAAGTCAGCGATCTTCAACAGAAAAATGAACAGCAATGGATGCAAATTTTCTTCACCAGAGAACACCAACATTGCGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCACCTTCTCGAAATACTTCGAGTTTGAGCACTATATCTGATCTCAAGGATTTTGCGTCTTCACAACTCCTTGATCTCAAGCGCCACATTGATCATTCTCACTCACAAATCGTCAAAGACCTCGATTCCTCAAACTCACGCCTCCAAAAGCGATTTAAGTTTCAAAATCAAGCATGCCAAAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTCATGAAAGTCAGGAAGCAATGAAGGCTTCATATGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCGCGAGCTTGCAAAACATCCATAACTGAACTTTCGCAGTCGTTTGAGAGATCTATTGATGCTCTTCGTAGCCGTTTTGGGATCTCGTCCACCTAA

Protein sequence

MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

Homology

[Close]

BLAST of LsiUNG000890 vs. TrEMBL
Match: A0A0A0LCH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G636950 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.4e-89
Identity = 181/196 (92.35%), Postives = 186/196 (94.90%), Query Frame = 1


Query: 1   MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRV 60
           MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+V
Sbjct: 1   MGKKRGGTRRSSAAELLETPPLTPPPATDSPKSAIFNRKMNSIGCKLSSPENTNLAKNKV 60

Query: 61  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 120
           PAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFK 
Sbjct: 61  PAGLFKSSPRNASSLSSISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKI 120

Query: 121 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSF 180
           Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASRACKTSITELSQSF
Sbjct: 121 QGQTCQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEEESASRACKTSITELSQSF 180

Query: 181 ERSIDALRSRFGISST 197
           ERSIDALRSRFGI ST
Sbjct: 181 ERSIDALRSRFGIPST 196

[Close]

BLAST of LsiUNG000890 vs. TrEMBL
Match: A0A151THG6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012797 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-44
Identity = 111/193 (57.51%), Postives = 142/193 (73.58%), Query Frame = 1


Query: 3   KKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPA 62
           KK G   + + A+LL+TP    +PA DSPKSAIF R  +           T+ A  RVP 
Sbjct: 2   KKTGKKTKPTVADLLKTPSPVASPAEDSPKSAIFTRAAS-----------TSKAAKRVPL 61

Query: 63  GLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKFQN 122
               SP R+  + S ISDL++FASS + DLKR ID SHS+I+KDL++S+SR+ KRFK Q 
Sbjct: 62  PTSTSPPRSHRAPSNISDLRNFASSGVDDLKRRIDRSHSEILKDLEASHSRIHKRFKMQT 121

Query: 123 QACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFER 182
           QA Q++MDEAEKEYKK+S+RI ES++AMKASYEEF+A  Q SASRACKTSI ELSQSFE+
Sbjct: 122 QAYQQVMDEAEKEYKKVSERITESRDAMKASYEEFIAEAQASASRACKTSIVELSQSFEK 181

Query: 183 SIDALRSRFGISS 196
           +ID+LR+R+G+SS
Sbjct: 182 AIDSLRNRYGVSS 183

[Close]

BLAST of LsiUNG000890 vs. TrEMBL
Match: K7K3Z2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G150100 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 9.9e-41
Identity = 110/195 (56.41%), Postives = 141/195 (72.31%), Query Frame = 1


Query: 3   KKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSN--GCKFSSPENTNIAKNRV 62
           KK G   + + A+LL++P    +P ++SP  AIF R ++S+  G K  S         RV
Sbjct: 2   KKTGKKTKPTVADLLKSPSPVASPTANSP--AIFKRAVSSSSKGAKRGS---------RV 61

Query: 63  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 122
                 SP R   + S ISDL++FASS + DLKR ID SHS+I+KDL++SNSRL KRFK 
Sbjct: 62  ALATSTSPPRGHRAPSNISDLRNFASSGVDDLKRRIDRSHSEILKDLEASNSRLHKRFKM 121

Query: 123 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSF 182
           QNQA Q++MDEAEKEYKK+S+RI ES++AMKASYEEF+A  Q SASRACKTSI ELSQSF
Sbjct: 122 QNQAYQQVMDEAEKEYKKVSERITESRDAMKASYEEFMAEAQASASRACKTSIVELSQSF 181

Query: 183 ERSIDALRSRFGISS 196
           E++ID+LR+R+GI S
Sbjct: 182 EKAIDSLRNRYGIPS 185

[Close]

BLAST of LsiUNG000890 vs. TrEMBL
Match: W9SC94_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022705 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-40
Identity = 113/202 (55.94%), Postives = 138/202 (68.32%), Query Frame = 1


Query: 2   GKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVP 61
           G+ RG  R+ SAAE LETP    +P S SP+SAIF         K      T  A +  P
Sbjct: 21  GRARGHNRKHSAAEFLETPLTMDSPPSQSPESAIFTGSKKRQNMK-----KTVSADSPAP 80

Query: 62  AGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKFQ 121
           A LF SPSR   +LS+ISDLKD ASS+L DLKRHID SHS+I+KD+D+S+SRL +RFK Q
Sbjct: 81  A-LFMSPSRPPRTLSSISDLKDLASSRLDDLKRHIDRSHSEILKDIDASSSRLHRRFKIQ 140

Query: 122 NQACQKMMDEAEKEYKKMSQRIHESQEA----------MKASYEEFLAHEQESASRACKT 181
           NQ  QK+ DE EKEYKK+S+RI +SQEA          ++ SY EF+A  Q S S AC T
Sbjct: 141 NQERQKVSDETEKEYKKISERIDKSQEALMKKDNLLVILQTSYAEFMADVQASTSHAC-T 200

Query: 182 SITELSQSFERSIDALRSRFGI 194
           S+T+LSQSFE+SIDALRSR+GI
Sbjct: 201 SVTKLSQSFEKSIDALRSRYGI 215

[Close]

BLAST of LsiUNG000890 vs. TrEMBL
Match: K7LF85_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G214200 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-39
Identity = 109/194 (56.19%), Postives = 138/194 (71.13%), Query Frame = 1


Query: 3   KKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSN-GCKFSSPENTNIAKNRVP 62
           KK G   + + A+LL+TP    +PA+DSP  AIF R  +S+ G K  S         RV 
Sbjct: 2   KKTGKKTKLTVADLLKTPSPVASPAADSP--AIFKRAASSSKGAKRGS---------RVA 61

Query: 63  AGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKFQ 122
                SP     + S ISDL++ ASS + DLKR ID SHS+I+KDL++SNSRL KRFK Q
Sbjct: 62  LATSTSPPCGHRAPSNISDLRNLASSGVDDLKRRIDRSHSEILKDLEASNSRLHKRFKMQ 121

Query: 123 NQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFE 182
           NQA Q++MDEAEKEYKK+S+RI ES++A K+SYEEF+A  Q SASRACKTSI ELSQSF 
Sbjct: 122 NQAYQQVMDEAEKEYKKVSERITESRDATKSSYEEFMAEAQASASRACKTSIAELSQSFA 181

Query: 183 RSIDALRSRFGISS 196
           ++ID+LR+R+GISS
Sbjct: 182 KAIDSLRNRYGISS 184

[Close]

BLAST of LsiUNG000890 vs. NCBI nr
Match: gi|449453439|ref|XP_004144465.1| (PREDICTED: uncharacterized protein LOC101212399 isoform X2 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89
Identity = 181/196 (92.35%), Postives = 186/196 (94.90%), Query Frame = 1


Query: 1   MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRV 60
           MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+V
Sbjct: 1   MGKKRGGTRRSSAAELLETPPLTPPPATDSPKSAIFNRKMNSIGCKLSSPENTNLAKNKV 60

Query: 61  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 120
           PAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFK 
Sbjct: 61  PAGLFKSSPRNASSLSSISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKI 120

Query: 121 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSF 180
           Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASRACKTSITELSQSF
Sbjct: 121 QGQTCQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEEESASRACKTSITELSQSF 180

Query: 181 ERSIDALRSRFGISST 197
           ERSIDALRSRFGI ST
Sbjct: 181 ERSIDALRSRFGIPST 196

[Close]

BLAST of LsiUNG000890 vs. NCBI nr
Match: gi|659120949|ref|XP_008460430.1| (PREDICTED: uncharacterized protein LOC103499240 isoform X2 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 6.9e-88
Identity = 179/196 (91.33%), Postives = 186/196 (94.90%), Query Frame = 1


Query: 1   MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRV 60
           MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+V
Sbjct: 1   MGKKRGGTRRSSAAELLETPPLTPPPATDSPKSAIFNRKRNSIGCKFSSPENTNIAKNKV 60

Query: 61  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 120
           PAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFK 
Sbjct: 61  PAGLFKSSPRNASSLSSISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKI 120

Query: 121 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSF 180
           Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASRACKT ITELSQ F
Sbjct: 121 QSQTCQKMMDEAEKEYKKMAQRIHESQEAMKASYEEFLAHEEESASRACKTFITELSQPF 180

Query: 181 ERSIDALRSRFGISST 197
           ERSIDALRSRFGI+ST
Sbjct: 181 ERSIDALRSRFGITST 196

[Close]

BLAST of LsiUNG000890 vs. NCBI nr
Match: gi|778682293|ref|XP_011651686.1| (PREDICTED: uncharacterized protein LOC101212399 isoform X1 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.5e-87
Identity = 181/197 (91.88%), Postives = 186/197 (94.42%), Query Frame = 1


Query: 1   MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRV 60
           MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+V
Sbjct: 1   MGKKRGGTRRSSAAELLETPPLTPPPATDSPKSAIFNRKMNSIGCKLSSPENTNLAKNKV 60

Query: 61  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 120
           PAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFK 
Sbjct: 61  PAGLFKSSPRNASSLSSISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKI 120

Query: 121 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQS 180
           Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASR ACKTSITELSQS
Sbjct: 121 QGQTCQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEEESASRAACKTSITELSQS 180

Query: 181 FERSIDALRSRFGISST 197
           FERSIDALRSRFGI ST
Sbjct: 181 FERSIDALRSRFGIPST 197

[Close]

BLAST of LsiUNG000890 vs. NCBI nr
Match: gi|659120945|ref|XP_008460428.1| (PREDICTED: uncharacterized protein LOC103499240 isoform X1 [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 1.7e-86
Identity = 179/197 (90.86%), Postives = 186/197 (94.42%), Query Frame = 1


Query: 1   MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRV 60
           MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+V
Sbjct: 1   MGKKRGGTRRSSAAELLETPPLTPPPATDSPKSAIFNRKRNSIGCKFSSPENTNIAKNKV 60

Query: 61  PAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKF 120
           PAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFK 
Sbjct: 61  PAGLFKSSPRNASSLSSISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKI 120

Query: 121 QNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQS 180
           Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASR ACKT ITELSQ 
Sbjct: 121 QSQTCQKMMDEAEKEYKKMAQRIHESQEAMKASYEEFLAHEEESASRAACKTFITELSQP 180

Query: 181 FERSIDALRSRFGISST 197
           FERSIDALRSRFGI+ST
Sbjct: 181 FERSIDALRSRFGITST 197

[Close]

BLAST of LsiUNG000890 vs. NCBI nr
Match: gi|1012355314|gb|KYP66501.1| (hypothetical protein KK1_012797 [Cajanus cajan])

HSP 1 Score: 186.4 bits (472), Expect = 4.7e-44
Identity = 111/193 (57.51%), Postives = 142/193 (73.58%), Query Frame = 1


Query: 3   KKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPA 62
           KK G   + + A+LL+TP    +PA DSPKSAIF R  +           T+ A  RVP 
Sbjct: 2   KKTGKKTKPTVADLLKTPSPVASPAEDSPKSAIFTRAAS-----------TSKAAKRVPL 61

Query: 63  GLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSSNSRLQKRFKFQN 122
               SP R+  + S ISDL++FASS + DLKR ID SHS+I+KDL++S+SR+ KRFK Q 
Sbjct: 62  PTSTSPPRSHRAPSNISDLRNFASSGVDDLKRRIDRSHSEILKDLEASHSRIHKRFKMQT 121

Query: 123 QACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFER 182
           QA Q++MDEAEKEYKK+S+RI ES++AMKASYEEF+A  Q SASRACKTSI ELSQSFE+
Sbjct: 122 QAYQQVMDEAEKEYKKVSERITESRDAMKASYEEFIAEAQASASRACKTSIVELSQSFEK 181

Query: 183 SIDALRSRFGISS 196
           +ID+LR+R+G+SS
Sbjct: 182 AIDSLRNRYGVSS 183

The following BLAST results are available for this feature:

BLAST of LsiUNG000890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of LsiUNG000890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCH5_CUCSA	4.4e-89	92.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G636950 PE=4 SV=1	[more]
A0A151THG6_CAJCA	3.3e-44	57.51	Uncharacterized protein OS=Cajanus cajan GN=KK1_012797 PE=4 SV=1	[more]
K7K3Z2_SOYBN	9.9e-41	56.41	Uncharacterized protein OS=Glycine max GN=GLYMA_01G150100 PE=4 SV=1	[more]
W9SC94_9ROSA	2.9e-40	55.94	Uncharacterized protein OS=Morus notabilis GN=L484_022705 PE=4 SV=1	[more]
K7LF85_SOYBN	3.2e-39	56.19	Uncharacterized protein OS=Glycine max GN=GLYMA_09G214200 PE=4 SV=1	[more]

BLAST of LsiUNG000890 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of LsiUNG000890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453439\|ref\|XP_004144465.1\|	6.3e-89	92.35	PREDICTED: uncharacterized protein LOC101212399 isoform X2 [Cucumis sativus]	[more]
gi\|659120949\|ref\|XP_008460430.1\|	6.9e-88	91.33	PREDICTED: uncharacterized protein LOC103499240 isoform X2 [Cucumis melo]	[more]
gi\|778682293\|ref\|XP_011651686.1\|	1.5e-87	91.88	PREDICTED: uncharacterized protein LOC101212399 isoform X1 [Cucumis sativus]	[more]
gi\|659120945\|ref\|XP_008460428.1\|	1.7e-86	90.86	PREDICTED: uncharacterized protein LOC103499240 isoform X1 [Cucumis melo]	[more]
gi\|1012355314\|gb\|KYP66501.1\|	4.7e-44	57.51	hypothetical protein KK1_012797 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
LsiUNG000890.1	LsiUNG000890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 122..149 scor
None	No IPR available	PANTHER	PTHR37371	FAMILY NOT NAMED	coord: 67..196 score: 6.9
None	No IPR available	PANTHER	PTHR37371:SF1	SUBFAMILY NOT NAMED	coord: 67..196 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
LsiUNG000890	Csa3G636950	Cucumber (Chinese Long) v2	culsiB149
LsiUNG000890	CSPI03G27930	Wild cucumber (PI 183967)	cpilsiB148
LsiUNG000890	Cucsa.149870	Cucumber (Gy14) v1	cgylsiB239
LsiUNG000890	CmaCh02G016500	Cucurbita maxima (Rimu)	cmalsiB528
LsiUNG000890	CmoCh02G016980	Cucurbita moschata (Rifu)	cmolsiB513
LsiUNG000890	Cla002218	Watermelon (97103) v1	lsiwmB003
LsiUNG000890	MELO3C022754	Melon (DHL92) v3.5.1	lsimeB003
LsiUNG000890	ClCG07G002370	Watermelon (Charleston Gray)	lsiwcgB005
LsiUNG000890	MELO3C022754.2	Melon (DHL92) v3.6.1	lsimedB003
LsiUNG000890	Cla97C07G130670	Watermelon (97103) v2	lsiwmbB004
LsiUNG000890	Bhi05G000014	Wax gourd	lsiwgoB003
LsiUNG000890	Cp4.1LG05g00340	Cucurbita pepo (Zucchini)	cpelsiB577
LsiUNG000890	CsGy3G025960	Cucumber (Gy14) v2	cgyblsiB135
LsiUNG000890	Carg08876	Silver-seed gourd	carlsiB711
LsiUNG000890	CsaV3_3G030320	Cucumber (Chinese Long) v3	cuclsiB162

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
LsiUNG000890	Cucurbita maxima (Rimu)	cmalsiB463
LsiUNG000890	Cucurbita moschata (Rifu)	cmolsiB448
LsiUNG000890	Cucurbita pepo (Zucchini)	cpelsiB191