LsiUNG000850 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTTCTTGTGGTTGGAGGAACTGGCTACTTGGGGAAGAGGATTGTAAAGGCAAGTCTTTTGGAAGGGCATGAGACATATGTTATTCAAAGGCCTGAGATTGGACTCGACATTGAGAAGCTTCAATTGTTGCTTTCCTTTAAGAAACAGGGGGCGGTGCTCGTCCCGGCTTCTTTCTCCGATTTTCAGAGTCTTGTCGACGCTGTGAAGCGTGTCGATGTCGTGATTTCGGCCATGTCTGGCGTCCATTTTAGAAGCCATAGCATTCTCCTTCAACTCAAGCTTGTTGAAGCCATTCAAGTTGCAGGAAATCTCAAGGTTTAATTTTCTTTTTTTATTCCATCAAACTATTGACTTTTGAGATAGTAATTAGTGTCTTTATTTGATTAAATTTACCACCAACAACTGGGTTTTAAGAGATTTAGTTTTGAACTTGTGTAATGTCGTTTTCTCCTTCTAATTAGTTTTGATTTTCATTTGTTGAGTTTCTACAAAATTTGCCTATATGTGACATAGCCAAGAGTAGTATTAAAAGTTTAGTTACATTACAAAGTTTATTTACGTGTTTATTTAGTCTCTCAATGTTTAGACTTTATTTGTTAACCATTTCGGTTTTAGTAATTTTCTATTTTAAAATATATGCTTGGTTTGTTTTAATTTTTCAATTATAGTTTCACATATTTTAAAGAAACACTTAAACTTCTAACTAAATTCCTAAAAACAAAAACAAGTTTTTTGAAACTACCATTTTTAATTTTCAAAACTTAGTTTGTTTTTTTTAAAAAAATATAAGTAGAAACTTGAAAGTGGATAACAAAAACATAAAATTTTATGGCTAAAATAGTAGTGTTTATAGGCTTAATTTTTAAAAATAAAAAACTAAATACCAAATGATTATCAAATAAAATCTTAGGGTCAGATTCTGTATTATGTTTTCAGATTCAATGACTTCAACAAATATTTGTTTGGCAGACAACCCAGATTTTGTTTATAAAACTGTTTTCAGATTCTGTGATTTTGGAAACAAAATTTTTATATTTTCATTGTATGCAGATTTTGAATTTTAAAATTTAAAATGCAGAATTATATTCAGTAAAGATAAAAATATTTAGAAATATAATATGTCATGCTATAAACTTAATTCATTTTTAAAAAATATAATAGGGACCGTTGCAAATATGACAATCAGATTCAAAGTATTAACATATATAACAACATTTTAAAAAAATTACAAATATAACAAAGTGTATCAGTGATAGACTTCTACCGCTGATAGACTTTTATGGTCTATCACTGATAGACCATAAGAGTCTATCAGCTATAGAAGTCTATCACGGATAGACTTTGCTATATTTGTAATTTTTTTAAAATGTTGCTATACACTTTATTGTTATTCCTAAATTTCCTACTCACTACAATTACCCAATATATGTATTATGTAATATATTATAAATTATATAATACAAAATAATAATTATACACTTTTTTTTAACATAAATCATATTCATAAATTAATTAATAATAATTTATTGTCAACTAAATATTAGTAGGTAACTAACTACAATTAGTTTTATGATTTACAAATATATAGTATCAAATACATTTTAATCAATTATTTAAATTACAATCCAATTTCTGAATATGCTACCAAACACATATATGAAAACATGAAATATAACTCTCTTTTCATTGAATCCTTTATTTTTAGATTTATGTTCTCAAATTCTCTACCAAACAAACCCTTAATTATCTAATAAGGTTCTTGAACTTTGGAGAAGTATGATCTAAAAACAGTAAAATGTCTACTAAACCTCCAACTTTTAGTTTTGTATCTAATTAATTTGTGACATATTTGAAATTTTTAGAAATTAATTGATGTACATATTAGATATTAGTTTAATTTTTTGGTTTAATAAAACTCCAAACTTTCAATATTGTGTCTAGAAGATTCATGTATTTAAAAAAAAAAAATGTCAAAAAGGTCAAGGACATACTAAACACAAACTTGAGAATTTAAAGATCTATTTGAACACAAAATTACATCTATTGATTATTAGACGTTTGTTAAAGTTCAACAACCAAACAAACGCAAACCTAAATGTTAATTTATGAAATGAACTTATAATTTAACATACAATTAAATTTAGGGCTATTGTCAAACATAAAAAAAAAAAAGCCAAACTATTTAGAAATATAAAAAACTTTTACGGTCGCGATAGACAACAATAGAAATATATTTTTTTTTTATAATAATTTTCCTTAAATATACCGTAATCCATTTACTTGAGCTTTTAAATTAATCGATAATTAACCTACAAATTAATTTGGTGGCATGGTGTATTTTATACAGAGATTTTTGCCATCAGAGTATGGAATAGATCCAGCAAGAATGGGAAATGCACTTGAACCAGGAAGAGAAACATTTGATCAAAAAATGGTAATAAGAAAAGCAATTGAAGAAGCCAATATTCCTTTTACCTATGTCTCTGGCAACTGCTTTGCCGGTTACTTTGCCGGTAACCTCTCTCAGATGCAAACTCTTGTTCCTCCAACTCATCAAGTTACACTTTATGGTGATGGCAATGTTAAAGGTAACCCACCACCAATTATTCTTAATTAATTAACCAAATTATTGCCCACATATATATGTTGTTTTATTAAATTATATCAAATGACCCCTCAATTTTTTTTATTACAACAATTACCCCTCACTTACGAGCCATTTGCTTGTTGCGAAAATAGATAATTATAATTTTTAGATGTCTTGAATTACATATATCTGGAATCATGATGTTCAACATCTTTTGAATAAACCACATTTATTTTGCAGGAATATTTTTTTTAAATAATTAAAAATATTTAGATAATTGTATTTGTTTTTATAGAATTTTTACTTAGACTATCTTAGAGATATTTACACAATGTTCCAAGAATTTCTTTATGACTATTCATTAATTTGTATTTACTTTCATATAATTTGAATTTTATATAACAGATTTGTTTTATTATTTTTCATTTCCTTTTGAATTAATATGGTTTATATTATTTTTCTATGCTATTTACCTCAACAAAATAATAACGAATAATCTATATTAGTTTAAGATTTTTTATGAAATAAATATTAATTTGAATTAGAATTTGAATATCTTTCTTAAAAAATATAATCAATTACAATATAACTAAGAAGAATGATATATATATGGTTCACAGTATTAATTTTAATTATAAAATACAAATAAATAATAATAATAATAATAATAATAATAATAAATAGGAAAATAGAGAGTAAAAAAGTAAGTAGAGGAGAGGATACCCTCAACATGAAAATCTTAAAAACTCATGTTTTAAGAGGACATCTAAAACTCTTTAGACGCTCCTCGTAATAGCATTTTTCAAATGTCTAGACATCTTTCATTATTGCAAAACAAACGTGATAATTCAATACTCATTCCATGGGAATATAAGATTCCACGAAAAAAAAGCCCCTTAAAGATAATTCAAAGTCCAACTTTTTTTTTTCTTTTTGAACTGTAGGCGCCGGTGGGGTTAATATTCAAACATTTCACTTTTTTTTTTGGTTGAGTTGATATATTATTTATCTAAAAGTTTATTGTAATATAACTGGGATTATATACTTAAGCTTAAGTTAGTTGTTAAAATCTTCATCTTTGGATCTAAAATTGGAAACGGTTTTTTAATTTAGATTTAAAATTTGATCCTGTGTGCAATTTTTCTCTTGTTTCCACTTTTGAGTGAATTTATTTATTGTTGTCAAACAATTGTTTCATCACTAATTCCTAATTTAAAAACAAGTTTTCCAACCTAGTGATAGAACGTAGATTTGTCCTACCTTGTATTGAAGCAAACGAACATCACTAAAATGTTCCTCTTTGTTCAATTCTGAAATTTCAGAACACAAAGTCTTCATAATTTTAATTTCTTTTAAAAAATATTTTGAAACCGACAACTTACCTAAGTCATTATAGCAAGTTCTTTCTTCAAAGTATCGTGTTCTTTTGCCTGAACACGAAGAAAGAGACTTTTTTTAGAAATAATGTTATTTTAATAAATAATGACAAAAATAGGGTTGGGTTGAAAATATTGACAAAACTAAGGTAGTAAAATCGTGGACGGGTCCAGGGTTTCTATCTGTCCTTAAAATCGTGGACCAAGTCCACGATTTACCCAGCCAAGTGTCAAGGGGTCCAAGTGGGTCAGTAAAATCTTGACATGTGAGAAAAACGAGTGCAGTTGTGGTAGGGTTGATCAAGACACATGTGAACAAAATCGTGGAACCAGTCCACGATTTGCGTGCCATGTAGACAATTTTATGAAATCGTGGACCCCATCTACGACTTTCTCACCTATTTTAAAAATATTTTATCCCTATCTTATTTTTGTCTTTATTTATTAAAATAATATTATTTAAAAAAAATTTCCAAAGAAAGTGGTTCAAATTTGAATAATGACATGTGGTATAATTGACAGTGGTATACATGGACGAAGATGATATTGCAAGGTACATTGTGAAGGCAGCAACTGATCGAAGAACAGTGAATAAAACAGTGTACATTAGGCCTCCACAAAACACTCTCTCCCAAAGAGAACTCATTGAGAAATGGGAAAAGCTTTCTGGAAAAGTATTGGAAAAGACAAGTGTTTCTGCCCAAGACTTTCTTGCCAGTATGAAAGGTAAACAAAATATATGCCCTACTTCAATTTAATGTGGTTTTTCTTAAGAAAAAAAATGTTATTTTTCTCATTTTTTATTTTTTGTTTTTAGTTTATGAGAAATAA ATGAGAGGGGCGGTGCTCGTCCCGGCTTCTTTCTCCGATTTTCAGAGTCTTGTCGACGCTGTGAAGCAGTATGGAATAGATCCAGCAAGAATGGGAAATGCACTTGAACCAGGAAGAGAAACATTTGATCAAAAAATGGTAATAAGAAAAGCAATTGAAGAAGCCAATATTCCTTTTACCTATGTCTCTGGCAACTGCTTTGCCGGTTACTTTGCCGGTAACCTCTCTCAGATGCAAACTCTTGTTCCTCCAACTCATCAAGTTACACTTTATGGTGATGGCAATGTTAAAGCAACTGATCGAAGAACAGTGAATAAAACAGTGTACATTAGGCCTCCACAAAACACTCTCTCCCAAAGAGAACTCATTGAGAAATGGGAAAAGCTTTCTGGAAAAGTATTGGAAAAGACAAGTGTTTCTGCCCAAGACTTTCTTGCCAGTATGAAAGTTTATGAGAAATAA ATGAGAGGGGCGGTGCTCGTCCCGGCTTCTTTCTCCGATTTTCAGAGTCTTGTCGACGCTGTGAAGCAGTATGGAATAGATCCAGCAAGAATGGGAAATGCACTTGAACCAGGAAGAGAAACATTTGATCAAAAAATGGTAATAAGAAAAGCAATTGAAGAAGCCAATATTCCTTTTACCTATGTCTCTGGCAACTGCTTTGCCGGTTACTTTGCCGGTAACCTCTCTCAGATGCAAACTCTTGTTCCTCCAACTCATCAAGTTACACTTTATGGTGATGGCAATGTTAAAGCAACTGATCGAAGAACAGTGAATAAAACAGTGTACATTAGGCCTCCACAAAACACTCTCTCCCAAAGAGAACTCATTGAGAAATGGGAAAAGCTTTCTGGAAAAGTATTGGAAAAGACAAGTGTTTCTGCCCAAGACTTTCTTGCCAGTATGAAAGTTTATGAGAAATAA MRGAVLVPASFSDFQSLVDAVKQYGIDPARMGNALEPGRETFDQKMVIRKAIEEANIPFTYVSGNCFAGYFAGNLSQMQTLVPPTHQVTLYGDGNVKATDRRTVNKTVYIRPPQNTLSQRELIEKWEKLSGKVLEKTSVSAQDFLASMKVYEK
BLAST of LsiUNG000850 vs. Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 7.6e-50 Identity = 106/205 (51.71%), Postives = 130/205 (63.41%), Query Frame = 1
BLAST of LsiUNG000850 vs. Swiss-Prot
Match: PILR1_LINPE (Bifunctional pinoresinol-lariciresinol reductase OS=Linum perenne GN=PLR_Lp1 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.2e-47 Identity = 105/205 (51.22%), Postives = 122/205 (59.51%), Query Frame = 1
BLAST of LsiUNG000850 vs. Swiss-Prot
Match: PILR1_LINUS (Bifunctional pinoresinol-lariciresinol reductase 1 OS=Linum usitatissimum GN=PLR_Lu1 PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 7.9e-47 Identity = 100/203 (49.26%), Postives = 125/203 (61.58%), Query Frame = 1
BLAST of LsiUNG000850 vs. Swiss-Prot
Match: PILR_LINUS (Bifunctional pinoresinol-lariciresinol reductase OS=Linum usitatissimum PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-46 Identity = 100/203 (49.26%), Postives = 124/203 (61.08%), Query Frame = 1
BLAST of LsiUNG000850 vs. Swiss-Prot
Match: PILR1_ARATH (Pinoresinol reductase 1 OS=Arabidopsis thaliana GN=PRR1 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44 Identity = 100/207 (48.31%), Postives = 122/207 (58.94%), Query Frame = 1
BLAST of LsiUNG000850 vs. TrEMBL
Match: A0A0A0LE76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G636990 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 5.9e-57 Identity = 125/205 (60.98%), Postives = 137/205 (66.83%), Query Frame = 1
BLAST of LsiUNG000850 vs. TrEMBL
Match: L0P1B3_LUPAN (Similar to isoflavone reductase homolog OS=Lupinus angustifolius PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 5.3e-50 Identity = 109/205 (53.17%), Postives = 134/205 (65.37%), Query Frame = 1
BLAST of LsiUNG000850 vs. TrEMBL
Match: V7CJ47_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G132400g PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.9e-49 Identity = 110/205 (53.66%), Postives = 129/205 (62.93%), Query Frame = 1
BLAST of LsiUNG000850 vs. TrEMBL
Match: A0A059C4E6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01255 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.0e-48 Identity = 109/205 (53.17%), Postives = 127/205 (61.95%), Query Frame = 1
BLAST of LsiUNG000850 vs. TrEMBL
Match: W9SD77_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022831 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.0e-48 Identity = 109/204 (53.43%), Postives = 129/204 (63.24%), Query Frame = 1
BLAST of LsiUNG000850 vs. TAIR10
Match: AT1G32100.1 (AT1G32100.1 pinoresinol reductase 1) HSP 1 Score: 179.1 bits (453), Expect = 2.1e-45 Identity = 100/207 (48.31%), Postives = 122/207 (58.94%), Query Frame = 1
BLAST of LsiUNG000850 vs. TAIR10
Match: AT4G13660.1 (AT4G13660.1 pinoresinol reductase 2) HSP 1 Score: 161.8 bits (408), Expect = 3.4e-40 Identity = 94/204 (46.08%), Postives = 112/204 (54.90%), Query Frame = 1
BLAST of LsiUNG000850 vs. TAIR10
Match: AT1G75300.1 (AT1G75300.1 NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23 Identity = 62/160 (38.75%), Postives = 84/160 (52.50%), Query Frame = 1
BLAST of LsiUNG000850 vs. TAIR10
Match: AT1G75290.1 (AT1G75290.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 101.7 bits (252), Expect = 4.2e-22 Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = 1
BLAST of LsiUNG000850 vs. TAIR10
Match: AT1G75280.1 (AT1G75280.1 NmrA-like negative transcriptional regulator family protein) HSP 1 Score: 101.3 bits (251), Expect = 5.5e-22 Identity = 56/145 (38.62%), Postives = 79/145 (54.48%), Query Frame = 1
BLAST of LsiUNG000850 vs. NCBI nr
Match: gi|659120967|ref|XP_008460437.1| (PREDICTED: isoflavone reductase homolog [Cucumis melo]) HSP 1 Score: 234.2 bits (596), Expect = 1.5e-58 Identity = 128/205 (62.44%), Postives = 140/205 (68.29%), Query Frame = 1
BLAST of LsiUNG000850 vs. NCBI nr
Match: gi|449453322|ref|XP_004144407.1| (PREDICTED: isoflavone reductase homolog [Cucumis sativus]) HSP 1 Score: 228.4 bits (581), Expect = 8.4e-57 Identity = 125/205 (60.98%), Postives = 137/205 (66.83%), Query Frame = 1
BLAST of LsiUNG000850 vs. NCBI nr
Match: gi|700203268|gb|KGN58401.1| (hypothetical protein Csa_3G636990 [Cucumis sativus]) HSP 1 Score: 228.4 bits (581), Expect = 8.4e-57 Identity = 125/205 (60.98%), Postives = 137/205 (66.83%), Query Frame = 1
BLAST of LsiUNG000850 vs. NCBI nr
Match: gi|440583725|emb|CCH47227.1| (similar to isoflavone reductase homolog [Lupinus angustifolius]) HSP 1 Score: 205.3 bits (521), Expect = 7.6e-50 Identity = 109/205 (53.17%), Postives = 134/205 (65.37%), Query Frame = 1
BLAST of LsiUNG000850 vs. NCBI nr
Match: gi|593790318|ref|XP_007158198.1| (hypothetical protein PHAVU_002G132400g [Phaseolus vulgaris]) HSP 1 Score: 201.8 bits (512), Expect = 8.4e-49 Identity = 110/205 (53.66%), Postives = 129/205 (62.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|