LsiUNG000190 (gene) Bottle gourd (USVL1VR-Ls)

NameLsiUNG000190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr00 : 322044 .. 323700 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTTCTCACACCCGAAAATATTGGATGTCATCGCTTTGTCTTGAAGACTATTCCCATGAGTGGATTCTTTTTTAATCGATGACGATTGTTTTTCATAGTTATGTTTGTTCATATGTATTCTTAAAAAAAATCACGTGCATCGCATGTGTTATTTATGAGCTAATTAAATAAAGGGTGCAAATATAAATTATGAGAGACTGAGGGGTTAAATTGTAAAAGTTGAATGTCACGAGGGCCAAATGGAAAACTCAAACAAAAAGTTAATCACGGTACACTAGCCTTTCAGTGAGCAACAACGCTTCTCTCTCTACCTCTCTCTCTTTCTCTCTCTACCATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAACCTGATGAACTTCCGGCCGACGATCAAAAGCGAAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGACGGACAAGACGACGATAAAGCCTCTAAATCTTTCCGATTCTCATTTCCGTCGCCTTCTCCTCCGCGGCAGGAGAAGTTAGTTCACGCCATACCTATCCTCACCATTATCTGCTTCCTCATCCTTTACATCTTCTCGCACAGTCCTTCTCAGTCAGGTACCTAATTCCTCTCATCGGATACGACAATCGCTCTTTACTTTGATCCTAATCGATCGTCTCTAATCGTTTCAGATTTGGCTCAGTTTCACGGATTCAAGCGTCCTTCAGAACAATTAGGTATAATGTAGTTAATGATTTCACGAATTGAGGCATTTTCTGTGTAATTTCTGAACTGAACCTTTGTATATTTGGTGCTTTTCTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTATACCGAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATCGAAAAATCATCTTCTCTTAAATCTCGCGCTCCGAGGAAACTCGCCGATTTCTAAACTCTGCATTTCCGATTATCTGACCTTCCGGTAAACTCTCACGGACCTCGTTTTCGCCGTACGGCTTCACTGCCGGCGCGTGTGCATCCATAACTATTTTTTTAAAAGCTTCTGTACATCAAATACTCCGTCAGATTAAATTGTTTTTTATTCCTTCTTTTGCTTTTACATTTTTTTGTTCTTCTCTGCATGCGCCGGCGGCGCTTCTGTAACTTCCGATGAGATACAATTAATTTAATCTAAACAAAGAATGAGTAAATTATCAGTTGATCAGAAAGTAGAACCACCGATCGACGCGCCGCGTTTTCGCCGGGACTGTAGCGCGTGAAGTGCCGGCGCCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAGTATAATATTTACTGTTATTTTCGATTTTCGGAATCGGACCGTTACGGCATTGGGAGAAGGGCCAAGACGCCAGCTGGAAAATGCTGTAGTCGCTGACGGTATCAGGTTCTTTCTTTCTAGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTACGTGGCACCTGCCTCATCGTTTAATTCAGTCTTAGGACCCGAATGCAAAGATATTTACTTCTTGCTGGCCTTCCATATCTCAGCTCTTGGGAATTTTATTTAATGTGTTTAGTAAAATTAAATTACTGATATAATTTTTAATG

mRNA sequence

ATTCTTCTCACACCCGAAAATATTGGATGTCATCGCTTTGTCTTGAAGACTATTCCCATGAGTGGATTCTTTTTTAATCGATGACGATTGTTTTTCATAGTTATGTTTGTTCATATGTATTCTTAAAAAAAATCACGTGCATCGCATGTGTTATTTATGAGCTAATTAAATAAAGGGTGCAAATATAAATTATGAGAGACTGAGGGGTTAAATTGTAAAAGTTGAATGTCACGAGGGCCAAATGGAAAACTCAAACAAAAAGTTAATCACGGTACACTAGCCTTTCAGTGAGCAACAACGCTTCTCTCTCTACCTCTCTCTCTTTCTCTCTCTACCATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAACCTGATGAACTTCCGGCCGACGATCAAAAGCGAAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGACGGACAAGACGACGATAAAGCCTCTAAATCTTTCCGATTCTCATTTCCGTCGCCTTCTCCTCCGCGGCAGGAGAAGTTAGTTCACGCCATACCTATCCTCACCATTATCTGCTTCCTCATCCTTTACATCTTCTCGCACAGTCCTTCTCAGTCAGATTTGGCTCAGTTTCACGGATTCAAGCGTCCTTCAGAACAATTAGAAATCAAAGCCGATGGAGACGAACTTATTATACCGAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATCGAAAAATCATCTTCTCTTAAATCTCGCGCTCCGAGGAAACTCGCCGATTTCTAAACTCTGCATTTCCGATTATCTGACCTTCCGGTAAACTCTCACGGACCTCGTTTTCGCCGTACGGCTTCACTGCCGGCGCGTGTGCATCCATAACTATTTTTTTAAAAGCTTCTGTACATCAAATACTCCGTCAGATTAAATTGTTTTTTATTCCTTCTTTTGCTTTTACATTTTTTTGTTCTTCTCTGCATGCGCCGGCGGCGCTTCTGTAACTTCCGATGAGATACAATTAATTTAATCTAAACAAAGAATGAGTAAATTATCAGTTGATCAGAAAGTAGAACCACCGATCGACGCGCCGCGTTTTCGCCGGGACTGTAGCGCGTGAAGTGCCGGCGCCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAGTATAATATTTACTGTTATTTTCGATTTTCGGAATCGGACCGTTACGGCATTGGGAGAAGGGCCAAGACGCCAGCTGGAAAATGCTGTAGTCGCTGACGGTATCAGGTTCTTTCTTTCTAGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTACGTGGCACCTGCCTCATCGTTTAATTCAGTCTTAGGACCCGAATGCAAAGATATTTACTTCTTGCTGGCCTTCCATATCTCAGCTCTTGGGAATTTTATTTAATGTGTTTAGTAAAATTAAATTACTGATATAATTTTTAATG

Coding sequence (CDS)

ATGGCGCCGGAGCAAAACCTGATGAACTTCCGGCCGACGATCAAAAGCGAAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGACGGACAAGACGACGATAAAGCCTCTAAATCTTTCCGATTCTCATTTCCGTCGCCTTCTCCTCCGCGGCAGGAGAAGTTAG

Protein sequence

MAPEQNLMNFRPTIKSERSTLHLLPQFSTTTDKTTIKPLNLSDSHFRRLLLRGRRS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
LsiUNG000190.1LsiUNG000190.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
LsiUNG000190CsaV3_3G048920Cucumber (Chinese Long) v3cuclsiB160
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
LsiUNG000190Wax gourdlsiwgoB002
LsiUNG000190Bottle gourd (USVL1VR-Ls)lsilsiB000
LsiUNG000190Cucumber (Gy14) v1cgylsiB500
LsiUNG000190Cucumber (Gy14) v1cgylsiB525
LsiUNG000190Cucurbita maxima (Rimu)cmalsiB297
LsiUNG000190Cucurbita maxima (Rimu)cmalsiB462
LsiUNG000190Cucurbita maxima (Rimu)cmalsiB529
LsiUNG000190Cucurbita maxima (Rimu)cmalsiB740
LsiUNG000190Cucurbita moschata (Rifu)cmolsiB285
LsiUNG000190Cucurbita moschata (Rifu)cmolsiB447
LsiUNG000190Cucurbita moschata (Rifu)cmolsiB514
LsiUNG000190Cucurbita moschata (Rifu)cmolsiB732
LsiUNG000190Cucurbita pepo (Zucchini)cpelsiB162
LsiUNG000190Cucurbita pepo (Zucchini)cpelsiB190
LsiUNG000190Cucurbita pepo (Zucchini)cpelsiB576
LsiUNG000190Cucurbita pepo (Zucchini)cpelsiB695
LsiUNG000190Wild cucumber (PI 183967)cpilsiB146
LsiUNG000190Wild cucumber (PI 183967)cpilsiB147
LsiUNG000190Cucumber (Chinese Long) v2culsiB148
LsiUNG000190Cucumber (Chinese Long) v2culsiB147
LsiUNG000190Melon (DHL92) v3.5.1lsimeB002
LsiUNG000190Melon (DHL92) v3.5.1lsimeB004
LsiUNG000190Watermelon (Charleston Gray)lsiwcgB000
LsiUNG000190Watermelon (Charleston Gray)lsiwcgB001
LsiUNG000190Watermelon (97103) v1lsiwmB001
LsiUNG000190Watermelon (97103) v1lsiwmB002
LsiUNG000190Cucumber (Gy14) v2cgyblsiB133
LsiUNG000190Cucumber (Gy14) v2cgyblsiB134
LsiUNG000190Melon (DHL92) v3.6.1lsimedB002
LsiUNG000190Melon (DHL92) v3.6.1lsimedB004
LsiUNG000190Silver-seed gourdcarlsiB712
LsiUNG000190Silver-seed gourdcarlsiB880
LsiUNG000190Silver-seed gourdcarlsiB887
LsiUNG000190Cucumber (Chinese Long) v3cuclsiB161
LsiUNG000190Watermelon (97103) v2lsiwmbB002
LsiUNG000190Watermelon (97103) v2lsiwmbB005