Lsi11G016920 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G016920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATPase, coupled to transmembrane movement of substance
Location	chr11 : 25103284 .. 25104080 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGTCCTTCATTGGCATAGTTTGCAATATTCTCATTTACCCTGAATTCGACTTGAGAAACAAAAGATGACAATAAATCAACGGCCCAAGTTTATCTGCAATTTCCTGGTATCACCAAAAGCCAGCTTAATAGGTCCTCCAATTCAAAATAACAGCAAAACTTGCCTTCACATGGGATTAGGCAAAAATGTACTAGAGTTCTTTTACTGAGTCAGAAACCTCACCTGAAAAGCATCGAGTACCTCTTCAGATTAATGACACTTGCATGCAGTACAAAAAGGTAACTTCTTGATGAAGTAACTGCCCCTCCAGCTTGATTTAATGGACGTTTGAAGAAGGAACTTCTAGGGTTTCTCTACTTTTCCCTCGTCGCTTGGCTTGTCGTCTTGATGGCGAATTCCGTCATCGCCTGTTTCAACGCTCTGCTACCTAATTTCATAATCGGAACTTCTCTTGTTGGAACCGTTTTAGGTTCTTCGTTTCTCTTTTCTGGGTATTTCATTTCGAAAGAAGAAATCCCCAATACTGGATTTTCATGCACTACTTGAGCTTGTTTAAGTACCAAATTGAATGCTTTCTGATAAACGAGTATGGAGGAGATGGAAAGAAGAGGAGATGTTTGATCAATGAAGAAGGAGTTTGTGTCCTTTATGGCGATGAGTTTTTGAGAAATAGAGGTCTTAAGCAATTGCAGAAATGGAGTCATCTGGGTATTCTGTTGAGTTTCATTCTTGGTTACAAAATTCTTTGCTTTCTCATTCTGTGGTACAGATCTTGGACGGCCAGAAAATGA

mRNA sequence

ATGCCAGAAACCTCACCTGAAAAGCATCGAGTACCTCTTCAGATTAATGACACTTGCATGCAGTACAAAAAGGAACTTCTAGGGTTTCTCTACTTTTCCCTCGTCGCTTGGCTTGTCGTCTTGATGGCGAATTCCGTCATCGCCTGTTTCAACGCTCTGCTACCTAATTTCATAATCGGAACTTCTCTTGTTGGAACCGTTTTAGGTTCTTCGTTTCTCTTTTCTGGAAGAAATCCCCAATACTGGATTTTCATGCACTACTTGAGCTTGTTTAAGTACCAAATTGAATGCTTTCTGATAAACGAGTATGGAGGAGATGGAAAGAAGAGGAGATGTTTGATCAATGAAGAAGGAGTTTGTGTCCTTTATGGCGATGAGTTTTTGAGAAATAGAGGTCTTAAGCAATTGCAGAAATGGAGTCATCTGGGTATTCTGTTGAGTTTCATTCTTGGTTACAAAATTCTTTGCTTTCTCATTCTGTGGTACAGATCTTGGACGGCCAGAAAATGA

Coding sequence (CDS)

ATGCCAGAAACCTCACCTGAAAAGCATCGAGTACCTCTTCAGATTAATGACACTTGCATGCAGTACAAAAAGGAACTTCTAGGGTTTCTCTACTTTTCCCTCGTCGCTTGGCTTGTCGTCTTGATGGCGAATTCCGTCATCGCCTGTTTCAACGCTCTGCTACCTAATTTCATAATCGGAACTTCTCTTGTTGGAACCGTTTTAGGTTCTTCGTTTCTCTTTTCTGGAAGAAATCCCCAATACTGGATTTTCATGCACTACTTGAGCTTGTTTAAGTACCAAATTGAATGCTTTCTGATAAACGAGTATGGAGGAGATGGAAAGAAGAGGAGATGTTTGATCAATGAAGAAGGAGTTTGTGTCCTTTATGGCGATGAGTTTTTGAGAAATAGAGGTCTTAAGCAATTGCAGAAATGGAGTCATCTGGGTATTCTGTTGAGTTTCATTCTTGGTTACAAAATTCTTTGCTTTCTCATTCTGTGGTACAGATCTTGGACGGCCAGAAAATGA

Protein sequence

MPETSPEKHRVPLQINDTCMQYKKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRNPQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWSHLGILLSFILGYKILCFLILWYRSWTARK

Homology

[Close]

BLAST of Lsi11G016920 vs. Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-37
Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------ 82
           ++EL GFLYFSLV W+V+LM+NS +ACF+AL+PNFI+GTS++  ++GS FLFSG      
Sbjct: 457 RRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKD 516

Query: 83  RNPQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
           R P YW FMHYLSLFKY  EC +INEY                    GD FL+ + LK+ 
Sbjct: 517 RIPVYWEFMHYLSLFKYPFECLMINEY-------------------RGDVFLKQQDLKES 576

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSWTAR 169
           QKWS+LGI+ SFI+GY++L F ILWYR +  R
Sbjct: 577 QKWSNLGIMASFIVGYRVLGFFILWYRCYRTR 589

[Close]

BLAST of Lsi11G016920 vs. Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-27
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 1


Query: 27  LGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQ 86
           + FL+FSL+ WL++  ANSV+ CF+AL+PNFI+G S++  V+GS FLFSG        P 
Sbjct: 499 MAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPG 558

Query: 87  YWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWS 146
           YWIFMHY+SLFKY  E FLINE+    K  +CL    G C++  ++ L+     +  +W 
Sbjct: 559 YWIFMHYISLFKYPFEGFLINEF---SKSNKCLEYGFGKCLVTEEDLLKEERYGEESRWR 618

Query: 147 HLGILLSFILGYKILCFLIL 161
           ++ I+L F+L Y+ + ++IL
Sbjct: 619 NVVIMLCFVLLYRFISYVIL 635

[Close]

BLAST of Lsi11G016920 vs. Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.1e-24
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 1


Query: 29  FLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYW 88
           F YF LV W+++LMANS +   ++L PN+I GTSLV  +L + FLFSG        P+YW
Sbjct: 441 FGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYW 500

Query: 89  IFMHYLSLFKYQIECFLINEYGGDGKKRRCLI----NEEGVCVLYGDEFLRNRGLKQLQK 148
           +FM++ S++KY ++  LINEY     K  CL+     +  +C++ G + L+ +GL + Q+
Sbjct: 501 LFMYFFSMYKYALDALLINEYSCLASK--CLVWLEEAQTKICMVTGGDVLKKKGLHEKQR 560

Query: 149 WSHLGILLSFILGYKILCFLILWYR 164
           W ++ +LL F + Y++LCFL L  R
Sbjct: 561 WFNVYVLLGFFVLYRVLCFLALLRR 583

[Close]

BLAST of Lsi11G016920 vs. Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23
Identity = 55/138 (39.86%), Postives = 92/138 (66.67%), Query Frame = 1


Query: 29  FLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYW 88
           F +F L  WL++LMA+S++   +A+ P+FI G SL+ TVLG+ FLFSG      + P+ W
Sbjct: 480 FSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKPW 539

Query: 89  IFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWSHL 148
           +FM+Y+SL++Y +E  ++NEY     +  C  +    C++ G++ L+ RGL +  +W ++
Sbjct: 540 MFMYYVSLYRYPLESMVVNEYW--SMREECFSSGNMGCLMTGEDVLKERGLDKDTRWINV 599

Query: 149 GILLSFILGYKILCFLIL 161
           GI+L+F + Y+ILC+ IL
Sbjct: 600 GIMLAFFVFYRILCWGIL 615

[Close]

BLAST of Lsi11G016920 vs. Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 1


Query: 31  YFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYWIF 90
           YF LV W++VLMANS +   ++L PN+I GTS V  +L + FLFSG        P+YW+F
Sbjct: 431 YFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLF 490

Query: 91  MHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGV--CVLYGDEFLRNRGLKQLQKWSHL 150
           M++ S++KY ++  LINEY     K      E  V  C++ G + L   GL + Q+W ++
Sbjct: 491 MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHERQRWFNV 550

Query: 151 GILLSFILGYKILCFLILWYR 164
            +LL F + Y++LCFL+L  R
Sbjct: 551 YMLLGFFVLYRVLCFLVLLKR 571

[Close]

BLAST of Lsi11G016920 vs. TrEMBL
Match: W9RHY6_9ROSA (ABC transporter G family member 10 OS=Morus notabilis GN=L484_004800 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 96/148 (64.86%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRN---- 82
           ++E  GFLYFSLV W+V+LM+NS +ACF+AL+PNFI GT+LV  ++GS FLFSG      
Sbjct: 463 RREFDGFLYFSLVVWMVILMSNSYVACFSALVPNFISGTTLVAGLMGSFFLFSGYFISKE 522

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLSLFKY  ECF+INEYGG+  + RCL +  G CVLYGDEFL  +GLKQ 
Sbjct: 523 DIPRYWIFMHYLSLFKYPFECFIINEYGGEKGRHRCLASLGGQCVLYGDEFLVQKGLKQS 582

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRS 165
           QKWS+LG++L FILGY+ILCFLILW R+
Sbjct: 583 QKWSNLGVMLGFILGYRILCFLILWCRT 610

[Close]

BLAST of Lsi11G016920 vs. TrEMBL
Match: A5B0P5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020682 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.9e-48
Identity = 97/149 (65.10%), Postives = 119/149 (79.87%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRN---- 82
           ++E+ GFLYFSLV W++VLM+NS IACF+AL+PNFIIGTSL+  ++GS FLFSG      
Sbjct: 515 RREIDGFLYFSLVVWIIVLMSNSFIACFSALVPNFIIGTSLIAGLMGSFFLFSGYFISKE 574

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLSLFKY  ECF+INEYGG  KK +CL + EG C LYGD FL  +GLK+ 
Sbjct: 575 DIPRYWIFMHYLSLFKYPFECFMINEYGG--KKGKCLESVEGECXLYGDGFLLQQGLKES 634

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSW 166
           QKWS+LG++L FI GY+ LCFLILWYRS+
Sbjct: 635 QKWSNLGVMLGFIFGYRFLCFLILWYRSY 661

[Close]

BLAST of Lsi11G016920 vs. TrEMBL
Match: A0A161YKI1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017164 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47
Identity = 87/148 (58.78%), Postives = 119/148 (80.41%), Query Frame = 1


Query: 28  GFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQY 87
           GF+YFSLV W+V+LM+NS  ACF+AL+PNFI+GTS++  ++GS FLFSG        P+Y
Sbjct: 474 GFMYFSLVVWMVILMSNSFTACFSALVPNFIMGTSVISGLMGSFFLFSGYFISKENIPRY 533

Query: 88  WIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWSH 147
           WIFMHYLSLFKY  ECF+IN+YGG+G +R+C+  E G C +YG+ FL+ +GL++ QKWS+
Sbjct: 534 WIFMHYLSLFKYPYECFMINQYGGEGGRRKCIQFEGGKCKMYGEGFLKQQGLRESQKWSN 593

Query: 148 LGILLSFILGYKILCFLILWYRSWTARK 170
           LG++L FI+GY++LCFLILW+R +  RK
Sbjct: 594 LGVMLGFIIGYRVLCFLILWFRCYRTRK 621

[Close]

BLAST of Lsi11G016920 vs. TrEMBL
Match: W9SNH3_9ROSA (ABC transporter G family member 10 OS=Morus notabilis GN=L484_018676 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-47
Identity = 91/154 (59.09%), Postives = 122/154 (79.22%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------ 82
           ++E+ GFLYFSLV W+V+L++NS +ACF+AL+PNFI+GTS++  ++GS FLFSG      
Sbjct: 470 RREIDGFLYFSLVVWMVLLISNSFVACFSALVPNFIMGTSVIAGLMGSFFLFSGYFISKE 529

Query: 83  RNPQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGV-CVLYGDEFLRNRGLKQ 142
             P YW+FMHYLSLFKY  ECFL+NEYG    K++CL  E+G  C+LYGD FLR +GLK+
Sbjct: 530 NLPNYWLFMHYLSLFKYPFECFLVNEYGVKQGKKKCLETEQGRGCILYGDGFLRQQGLKE 589

Query: 143 LQKWSHLGILLSFILGYKILCFLILWYRSWTARK 170
             KWS+LG++L FI+GY++LCFLILWYR + +RK
Sbjct: 590 SLKWSNLGVMLGFIVGYRVLCFLILWYRCYRSRK 623

[Close]

BLAST of Lsi11G016920 vs. TrEMBL
Match: M5X9I5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015640mg PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-47
Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------ 82
           ++E+ GFLYFSLV W+V+LM+NS++ACF+AL+PNFI+GTSLV  ++GS FLFSG      
Sbjct: 458 RREIDGFLYFSLVVWMVILMSNSLVACFSALVPNFIMGTSLVAGLMGSFFLFSGFFIPKE 517

Query: 83  RNPQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P YW FMHYLSLFKY +ECFLINEYGG+  +RRCL +  G C+LYGD FL  +GLK  
Sbjct: 518 DIPSYWTFMHYLSLFKYPLECFLINEYGGEQGRRRCLQSVGGDCILYGDWFLMQQGLKPS 577

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSWTARK 170
           QKW +LGI+L FI+GY+ L FLILWYRS+   K
Sbjct: 578 QKWINLGIMLGFIIGYRWLGFLILWYRSYRISK 610

[Close]

BLAST of Lsi11G016920 vs. TAIR10
Match: AT1G53270.1 (AT1G53270.1 ABC-2 type transporter family protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-38
Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------ 82
           ++EL GFLYFSLV W+V+LM+NS +ACF+AL+PNFI+GTS++  ++GS FLFSG      
Sbjct: 457 RRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKD 516

Query: 83  RNPQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
           R P YW FMHYLSLFKY  EC +INEY                    GD FL+ + LK+ 
Sbjct: 517 RIPVYWEFMHYLSLFKYPFECLMINEY-------------------RGDVFLKQQDLKES 576

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSWTAR 169
           QKWS+LGI+ SFI+GY++L F ILWYR +  R
Sbjct: 577 QKWSNLGIMASFIVGYRVLGFFILWYRCYRTR 589

[Close]

BLAST of Lsi11G016920 vs. TAIR10
Match: AT2G13610.1 (AT2G13610.1 ABC-2 type transporter family protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-28
Identity = 62/140 (44.29%), Postives = 92/140 (65.71%), Query Frame = 1


Query: 27  LGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQ 86
           + FL+FSL+ WL++  ANSV+ CF+AL+PNFI+G S++  V+GS FLFSG        P 
Sbjct: 499 MAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPG 558

Query: 87  YWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWS 146
           YWIFMHY+SLFKY  E FLINE+    K  +CL    G C++  ++ L+     +  +W 
Sbjct: 559 YWIFMHYISLFKYPFEGFLINEF---SKSNKCLEYGFGKCLVTEEDLLKEERYGEESRWR 618

Query: 147 HLGILLSFILGYKILCFLIL 161
           ++ I+L F+L Y+ + ++IL
Sbjct: 619 NVVIMLCFVLLYRFISYVIL 635

[Close]

BLAST of Lsi11G016920 vs. TAIR10
Match: AT5G52860.1 (AT5G52860.1 ABC-2 type transporter family protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-25
Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 1


Query: 29  FLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYW 88
           F YF LV W+++LMANS +   ++L PN+I GTSLV  +L + FLFSG        P+YW
Sbjct: 441 FGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLPKYW 500

Query: 89  IFMHYLSLFKYQIECFLINEYGGDGKKRRCLI----NEEGVCVLYGDEFLRNRGLKQLQK 148
           +FM++ S++KY ++  LINEY     K  CL+     +  +C++ G + L+ +GL + Q+
Sbjct: 501 LFMYFFSMYKYALDALLINEYSCLASK--CLVWLEEAQTKICMVTGGDVLKKKGLHEKQR 560

Query: 149 WSHLGILLSFILGYKILCFLILWYR 164
           W ++ +LL F + Y++LCFL L  R
Sbjct: 561 WFNVYVLLGFFVLYRVLCFLALLRR 583

[Close]

BLAST of Lsi11G016920 vs. TAIR10
Match: AT5G19410.1 (AT5G19410.1 ABC-2 type transporter family protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 55/138 (39.86%), Postives = 92/138 (66.67%), Query Frame = 1


Query: 29  FLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYW 88
           F +F L  WL++LMA+S++   +A+ P+FI G SL+ TVLG+ FLFSG      + P+ W
Sbjct: 480 FSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKPW 539

Query: 89  IFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWSHL 148
           +FM+Y+SL++Y +E  ++NEY     +  C  +    C++ G++ L+ RGL +  +W ++
Sbjct: 540 MFMYYVSLYRYPLESMVVNEYW--SMREECFSSGNMGCLMTGEDVLKERGLDKDTRWINV 599

Query: 149 GILLSFILGYKILCFLIL 161
           GI+L+F + Y+ILC+ IL
Sbjct: 600 GIMLAFFVFYRILCWGIL 615

[Close]

BLAST of Lsi11G016920 vs. TAIR10
Match: AT4G25750.1 (AT4G25750.1 ABC-2 type transporter family protein)

HSP 1 Score: 107.8 bits (268), Expect = 6.5e-24
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 1


Query: 31  YFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQYWIF 90
           YF LV W++VLMANS +   ++L PN+I GTS V  +L + FLFSG        P+YW+F
Sbjct: 431 YFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLF 490

Query: 91  MHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGV--CVLYGDEFLRNRGLKQLQKWSHL 150
           M++ S++KY ++  LINEY     K      E  V  C++ G + L   GL + Q+W ++
Sbjct: 491 MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLHERQRWFNV 550

Query: 151 GILLSFILGYKILCFLILWYR 164
            +LL F + Y++LCFL+L  R
Sbjct: 551 YMLLGFFVLYRVLCFLVLLKR 571

[Close]

BLAST of Lsi11G016920 vs. NCBI nr
Match: gi|225446575|ref|XP_002276422.1| (PREDICTED: ABC transporter G family member 10 [Vitis vinifera])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRN---- 82
           ++E+ GFLYFSLV W++VLM+NS IACF+AL+PNFIIGTSL+  ++GS FLFSG      
Sbjct: 458 RREIDGFLYFSLVVWIIVLMSNSFIACFSALVPNFIIGTSLIAGLMGSFFLFSGYFISKE 517

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLSLFKY  ECF+INEYGG  KK +CL + EG CVLYGD FL  +GLK+ 
Sbjct: 518 DIPRYWIFMHYLSLFKYPFECFMINEYGG--KKGKCLESVEGECVLYGDGFLLQQGLKES 577

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSWTAR 169
           QKWS+LG++L FI GY+ LCFLILWYRS+  R
Sbjct: 578 QKWSNLGVMLGFIFGYRFLCFLILWYRSYRHR 607

[Close]

BLAST of Lsi11G016920 vs. NCBI nr
Match: gi|703109725|ref|XP_010099374.1| (ABC transporter G family member 10 [Morus notabilis])

HSP 1 Score: 200.7 bits (509), Expect = 2.1e-48
Identity = 96/148 (64.86%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRN---- 82
           ++E  GFLYFSLV W+V+LM+NS +ACF+AL+PNFI GT+LV  ++GS FLFSG      
Sbjct: 463 RREFDGFLYFSLVVWMVILMSNSYVACFSALVPNFISGTTLVAGLMGSFFLFSGYFISKE 522

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLSLFKY  ECF+INEYGG+  + RCL +  G CVLYGDEFL  +GLKQ 
Sbjct: 523 DIPRYWIFMHYLSLFKYPFECFIINEYGGEKGRHRCLASLGGQCVLYGDEFLVQKGLKQS 582

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRS 165
           QKWS+LG++L FILGY+ILCFLILW R+
Sbjct: 583 QKWSNLGVMLGFILGYRILCFLILWCRT 610

[Close]

BLAST of Lsi11G016920 vs. NCBI nr
Match: gi|147776027|emb|CAN60804.1| (hypothetical protein VITISV_020682 [Vitis vinifera])

HSP 1 Score: 200.3 bits (508), Expect = 2.7e-48
Identity = 97/149 (65.10%), Postives = 119/149 (79.87%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSGRN---- 82
           ++E+ GFLYFSLV W++VLM+NS IACF+AL+PNFIIGTSL+  ++GS FLFSG      
Sbjct: 515 RREIDGFLYFSLVVWIIVLMSNSFIACFSALVPNFIIGTSLIAGLMGSFFLFSGYFISKE 574

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLSLFKY  ECF+INEYGG  KK +CL + EG C LYGD FL  +GLK+ 
Sbjct: 575 DIPRYWIFMHYLSLFKYPFECFMINEYGG--KKGKCLESVEGECXLYGDGFLLQQGLKES 634

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSW 166
           QKWS+LG++L FI GY+ LCFLILWYRS+
Sbjct: 635 QKWSNLGVMLGFIFGYRFLCFLILWYRSY 661

[Close]

BLAST of Lsi11G016920 vs. NCBI nr
Match: gi|720070528|ref|XP_010277768.1| (PREDICTED: ABC transporter G family member 10-like [Nelumbo nucifera])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 90/152 (59.21%), Postives = 120/152 (78.95%), Query Frame = 1


Query: 23  KKELLGFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG----RN 82
           ++E+ GFLYF LV W+VVLM+NS +ACF+AL+PNFI+G SL+   +GS FLFSG    +N
Sbjct: 472 RREIDGFLYFCLVVWVVVLMSNSFVACFSALVPNFIMGNSLIAGFMGSFFLFSGYFISKN 531

Query: 83  --PQYWIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQL 142
             P+YWIFMHYLS FKY  ECF+INEYGG+  +RRCL +E GVC+ YGD FLR + LK L
Sbjct: 532 SIPKYWIFMHYLSFFKYPFECFMINEYGGEKGRRRCLQSEGGVCIFYGDGFLRQQELKDL 591

Query: 143 QKWSHLGILLSFILGYKILCFLILWYRSWTAR 169
           +KW++LG++  FI+GY++LC+LI+WYR +  R
Sbjct: 592 EKWNNLGVMFGFIVGYRVLCYLIMWYRCYRTR 623

[Close]

BLAST of Lsi11G016920 vs. NCBI nr
Match: gi|1021036136|gb|KZM93919.1| (hypothetical protein DCAR_017164 [Daucus carota subsp. sativus])

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-47
Identity = 87/148 (58.78%), Postives = 119/148 (80.41%), Query Frame = 1


Query: 28  GFLYFSLVAWLVVLMANSVIACFNALLPNFIIGTSLVGTVLGSSFLFSG------RNPQY 87
           GF+YFSLV W+V+LM+NS  ACF+AL+PNFI+GTS++  ++GS FLFSG        P+Y
Sbjct: 474 GFMYFSLVVWMVILMSNSFTACFSALVPNFIMGTSVISGLMGSFFLFSGYFISKENIPRY 533

Query: 88  WIFMHYLSLFKYQIECFLINEYGGDGKKRRCLINEEGVCVLYGDEFLRNRGLKQLQKWSH 147
           WIFMHYLSLFKY  ECF+IN+YGG+G +R+C+  E G C +YG+ FL+ +GL++ QKWS+
Sbjct: 534 WIFMHYLSLFKYPYECFMINQYGGEGGRRKCIQFEGGKCKMYGEGFLKQQGLRESQKWSN 593

Query: 148 LGILLSFILGYKILCFLILWYRSWTARK 170
           LG++L FI+GY++LCFLILW+R +  RK
Sbjct: 594 LGVMLGFIIGYRVLCFLILWFRCYRTRK 621

The following BLAST results are available for this feature:

BLAST of Lsi11G016920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB10G_ARATH	2.8e-37	53.29	ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1	[more]
AB5G_ARATH	2.6e-27	44.29	ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1	[more]
AB8G_ARATH	6.1e-24	40.69	ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1	[more]
AB23G_ARATH	3.9e-23	39.86	ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1	[more]
AB4G_ARATH	1.1e-22	41.13	ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1	[more]

BLAST of Lsi11G016920 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RHY6_9ROSA	1.4e-48	64.86	ABC transporter G family member 10 OS=Morus notabilis GN=L484_004800 PE=4 SV=1	[more]
A5B0P5_VITVI	1.9e-48	65.10	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020682 PE=4 SV=1	[more]
A0A161YKI1_DAUCA	1.6e-47	58.78	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017164 PE=4 SV=1	[more]
W9SNH3_9ROSA	2.1e-47	59.09	ABC transporter G family member 10 OS=Morus notabilis GN=L484_018676 PE=4 SV=1	[more]
M5X9I5_PRUPE	2.7e-47	62.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015640mg PE=4 SV=1	[more]

BLAST of Lsi11G016920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53270.1	1.6e-38	53.29	ABC-2 type transporter family protein	[more]
AT2G13610.1	1.5e-28	44.29	ABC-2 type transporter family protein	[more]
AT5G52860.1	3.4e-25	40.69	ABC-2 type transporter family protein	[more]
AT5G19410.1	2.2e-24	39.86	ABC-2 type transporter family protein	[more]
AT4G25750.1	6.5e-24	41.13	ABC-2 type transporter family protein	[more]

BLAST of Lsi11G016920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|225446575\|ref\|XP_002276422.1\|	2.5e-49	65.13	PREDICTED: ABC transporter G family member 10 [Vitis vinifera]	[more]
gi\|703109725\|ref\|XP_010099374.1\|	2.1e-48	64.86	ABC transporter G family member 10 [Morus notabilis]	[more]
gi\|147776027\|emb\|CAN60804.1\|	2.7e-48	65.10	hypothetical protein VITISV_020682 [Vitis vinifera]	[more]
gi\|720070528\|ref\|XP_010277768.1\|	1.3e-47	59.21	PREDICTED: ABC transporter G family member 10-like [Nelumbo nucifera]	[more]
gi\|1021036136\|gb\|KZM93919.1\|	2.3e-47	58.78	hypothetical protein DCAR_017164 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G016920.1	Lsi11G016920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 24..168 score: 2.7
None	No IPR available	PANTHER	PTHR19241:SF242	SUBFAMILY NOT NAMED	coord: 24..168 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G016920	CmaCh19G010310	Cucurbita maxima (Rimu)	cmalsiB474
Lsi11G016920	Cla97C09G174120	Watermelon (97103) v2	lsiwmbB105
Lsi11G016920	Bhi05G001825	Wax gourd	lsiwgoB121
Lsi11G016920	Cp4.1LG15g08550	Cucurbita pepo (Zucchini)	cpelsiB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G016920	Cucumber (Gy14) v1	cgylsiB559
Lsi11G016920	Cucurbita maxima (Rimu)	cmalsiB101
Lsi11G016920	Cucurbita moschata (Rifu)	cmolsiB087
Lsi11G016920	Cucurbita moschata (Rifu)	cmolsiB459
Lsi11G016920	Cucurbita pepo (Zucchini)	cpelsiB531
Lsi11G016920	Cucumber (Chinese Long) v2	culsiB500
Lsi11G016920	Melon (DHL92) v3.5.1	lsimeB092
Lsi11G016920	Watermelon (Charleston Gray)	lsiwcgB072
Lsi11G016920	Watermelon (Charleston Gray)	lsiwcgB113
Lsi11G016920	Watermelon (97103) v1	lsiwmB085
Lsi11G016920	Watermelon (97103) v1	lsiwmB095
Lsi11G016920	Cucumber (Gy14) v2	cgyblsiB469
Lsi11G016920	Melon (DHL92) v3.6.1	lsimedB098
Lsi11G016920	Silver-seed gourd	carlsiB352
Lsi11G016920	Silver-seed gourd	carlsiB484
Lsi11G016920	Cucumber (Chinese Long) v3	cuclsiB534
Lsi11G016920	Watermelon (97103) v2	lsiwmbB100