Lsi11G016620 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G016620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr11 : 24897941 .. 24900490 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGTTTCAGTGTTATTTCTTTGACTCAACTGTTAGAATTTGCTTTATCAGAATGTCCAAATAAGATTTTCTTTTTGCAACTTGAAGTTCAGTTCTGTTCTGTTCTCTGTTTTTATTTCTCAGAATGTTCAGCCTACTGCTACTACTTTCATTTGCACTTCACGTTTCGTCTTTTTCCTCTAAAACTTTAGGTACGAGTAGTTGTAATTATACCATCAAACTTCTAATTGTAAAAACTGAGCCCTCAAACCTATGTAAATATAGACATTGTGATAATTGTACATGTTTTACAATTCAATTTTTATCATTTAAGGGTTTAATTTCTACGATTATTGCAAGTTTGAGGGATCAATTTTAACATTAGTAGAAGTTTGAAAATTTGATTTTTATAATTACAAATTTTCTTTTATCTTTTCAGATGGTCTACCCATGTTAAAGTTTTTTGTACTCCAAAAAAAAATGCTAAAGTTTCCATTTGATCACAAATTTCAAAATTCTCTTCGAAAGAGAGTATTTTTCTCTTTTTTAGCATGGTGAAATGATTCCGGTTTAAATCTTTTCTCATTTTGCTTTTGACAATGATTTTTTCTTTTCATGAAGGTGTACTTGTGTGGTAATTCCATTTTTCTTTTTCAAAATTTAGTTAAAAGATTTAGTTGTTGACTCAATTTAAGGCTATACTTTCTTTTTATAAGCAAAATCTTGTTTATCTGTCTTTAAATGTTTAATTATTTAAGTGTTTAAAACATAACAAAAGAAATTGTTGAGAAGAAAATGTTCATCTCGAAAAAGTATTTGATGCCTTTCTGCTCATTTTGTATTCAAGAGTTTGGTTTATTTTTGTTCTTGTGCTTTCAAAATGTTTATTGTGTTCCTAATTCATTTAATTTTAGTTTATTTTAACTCATAAACTTTCAAAATATCTGTTTTGGTATATTTGCAAAATTTTAACTCGTTTTATTCCCAGTAGAAATCTTTTTAATACAGATTTATTGGTATTGAATGAAAAACCATGAAATGAAAATAAAATTAAACAAGGGCCAAAACAAACATTTTAAAAATATATGGACTAAAATGAACCAATATTGATATATCAAAATAATTTTTTTTTTTGGGGTTTACAAAACCAAAATAGTATTTAAATTTGGTATTTTATCTTTCAAATGTAAAAAGGGAAAGAAAAAAGTTCGTTGATTTATACCATAAAGAAGAAAGAAATAGAAAATATTAATGTAAGTTGGGATCAAATATATTATTGTGATATGACCCCTTATTTTGAGTACTAGATTAATATGAAATGACATTAAATTCATATTCCATATGGAAAATTTTTGAAAATGACTGCAACAATAATGTAGTTGTCAAATCCTATAATTTTGTGAGAAATTTTCATGTTGACTTTATTCAAATGAGTCATAGCAACTCAACTTAATATTATAATAATAATAAAATATTGATTGAACCAACCTAACTAGAAAATAAATCACACTATATTTTATCATAAAATTATCACATCAATCATTTGTTCTTTCGACTTCAAAAAAGATATTATAGTTTAATGAAATTTCTTAAATTTATAAAAGGCGTTATGGGTGAGATTATGTTTTTTATTCATAATTAAGTTATATTTTGCAACTTCATTATTACGAATTTGTACAAAATAATCAATGTAGGTAATTTTGTCATTTAAAACAATTGCCCTAGAGACTGAAACAATAAAATATATATATATATTCATCAATAACCATTTTACACTTTTAAAAATGTTTATTGTATATATTAAATTCATTATTCAATATCATTTTGTTCCTTATTTCATCTAATTTGTTAGAATATGAAATATATAGACACGTCTAATAGAAAAGGAGGAGAGAAAAAAGAGATTTTTTCCCTTATATATATATAATTTTTAAATAAACATGTACAAAGTAAATGATGATTTAATAAGGTTAATCTTGATCATGCAATTAATCACAAGTACCACAAACAATTTGGTCATATAAAGTTCCAACCTTTCTACTAATAATAAAACCATACATAGGATTAATTTAAAAAAAATAAAAAGAAAGAAAGAAAGCCAAATTAAGCAAACCACATGATTATGGAAATAATTAATAAAGATTAAAAAGTAGAGAGTAAATTAAGAATGGAAAAAAATCAATGCCCCAAGACGATGACTCTACCGGTAATCGGTTCTTCAGGTGCAATGGTTTCAAGTTCTAAACCCAACGCCCGTTTTTCGGCGGCATCTGTGGACTCCGACATGGACAACGCCATCGAAAGCTTTCCCACTACTTTATACGTGTCGTCAAATTCGTCCTCGTCATCATTCTCGTTGTAGTTTACGGAGGTGATGCGGCCGATGTGCTGGCAGTGGTCCCCTCTGTCCGAGTATCCACCTGGGCAGAACGGCTCCACCGCGTGCCCCACTGCGTGGATGCCGAAGTGGTCGGAGTCGGCGTCGGCGACTTTGCAAATCAAGATGGCGATGACGCAAACAAATGATAGCCCTTTCGAAATTCCCATACTGCCCATATCAATATGA

mRNA sequence

ATGGAGAGTAAATTAAGAATGGAAAAAAATCAATGCCCCAAGACGATGACTCTACCGGTAATCGGTTCTTCAGGTGCAATGGTTTCAAGTTCTAAACCCAACGCCCGTTTTTCGGCGGCATCTGTGGACTCCGACATGGACAACGCCATCGAAAGCTTTCCCACTACTTTATACTTTACGGAGGTGATGCGGCCGATGTGCTGGCAGTGGTCCCCTCTGTCCGAGTATCCACCTGGGCAGAACGGCTCCACCGCGTGCCCCACTGCGTGGATGCCGAAGTGGTCGGAGTCGGCGTCGGCGACTTTGCAAATCAAGATGGCGATGACGCAAACAAATGATAGCCCTTTCGAAATTCCCATACTGCCCATATCAATATGA

Coding sequence (CDS)

ATGGAGAGTAAATTAAGAATGGAAAAAAATCAATGCCCCAAGACGATGACTCTACCGGTAATCGGTTCTTCAGGTGCAATGGTTTCAAGTTCTAAACCCAACGCCCGTTTTTCGGCGGCATCTGTGGACTCCGACATGGACAACGCCATCGAAAGCTTTCCCACTACTTTATACTTTACGGAGGTGATGCGGCCGATGTGCTGGCAGTGGTCCCCTCTGTCCGAGTATCCACCTGGGCAGAACGGCTCCACCGCGTGCCCCACTGCGTGGATGCCGAAGTGGTCGGAGTCGGCGTCGGCGACTTTGCAAATCAAGATGGCGATGACGCAAACAAATGATAGCCCTTTCGAAATTCCCATACTGCCCATATCAATATGA

Protein sequence

MESKLRMEKNQCPKTMTLPVIGSSGAMVSSSKPNARFSAASVDSDMDNAIESFPTTLYFTEVMRPMCWQWSPLSEYPPGQNGSTACPTAWMPKWSESASATLQIKMAMTQTNDSPFEIPILPISI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G016620.1Lsi11G016620.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G016620CsGy6G021930Cucumber (Gy14) v2cgyblsiB392
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G016620Cucumber (Chinese Long) v3cuclsiB454
Lsi11G016620Cucumber (Chinese Long) v3cuclsiB456
Lsi11G016620Watermelon (97103) v2lsiwmbB088
Lsi11G016620Watermelon (97103) v2lsiwmbB107
Lsi11G016620Wax gourdlsiwgoB114
Lsi11G016620Wax gourdlsiwgoB126
Lsi11G016620Bottle gourd (USVL1VR-Ls)lsilsiB023
Lsi11G016620Cucumber (Gy14) v1cgylsiB309
Lsi11G016620Cucurbita maxima (Rimu)cmalsiB101
Lsi11G016620Cucurbita maxima (Rimu)cmalsiB474
Lsi11G016620Cucurbita maxima (Rimu)cmalsiB516
Lsi11G016620Cucurbita maxima (Rimu)cmalsiB559
Lsi11G016620Cucurbita moschata (Rifu)cmolsiB087
Lsi11G016620Cucurbita moschata (Rifu)cmolsiB459
Lsi11G016620Cucurbita moschata (Rifu)cmolsiB497
Lsi11G016620Cucurbita moschata (Rifu)cmolsiB543
Lsi11G016620Cucurbita pepo (Zucchini)cpelsiB201
Lsi11G016620Cucurbita pepo (Zucchini)cpelsiB234
Lsi11G016620Cucurbita pepo (Zucchini)cpelsiB531
Lsi11G016620Cucurbita pepo (Zucchini)cpelsiB608
Lsi11G016620Cucumber (Chinese Long) v2culsiB429
Lsi11G016620Wild cucumber (PI 183967)cpilsiB431
Lsi11G016620Wild cucumber (PI 183967)cpilsiB433
Lsi11G016620Cucumber (Chinese Long) v2culsiB427
Lsi11G016620Melon (DHL92) v3.5.1lsimeB085
Lsi11G016620Melon (DHL92) v3.5.1lsimeB111
Lsi11G016620Watermelon (Charleston Gray)lsiwcgB073
Lsi11G016620Watermelon (Charleston Gray)lsiwcgB099
Lsi11G016620Watermelon (97103) v1lsiwmB086
Lsi11G016620Watermelon (97103) v1lsiwmB108
Lsi11G016620Cucumber (Gy14) v2cgyblsiB394
Lsi11G016620Melon (DHL92) v3.6.1lsimedB092
Lsi11G016620Melon (DHL92) v3.6.1lsimedB119
Lsi11G016620Silver-seed gourdcarlsiB029
Lsi11G016620Silver-seed gourdcarlsiB306
Lsi11G016620Silver-seed gourdcarlsiB352
Lsi11G016620Silver-seed gourdcarlsiB484