Lsi11G014990 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G014990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DNA cross-link repair 1B-like protein
Location	chr11 : 23471210 .. 23473796 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTTGGAAATTCGAATCGAACTCCCACTCCGACTGCTGCAAATACCACGCCACCGCCGCCGCTGGATGGAGAATGGCCTGATTTCGGTGGACCAGTGGTCGGACGGTAGCCAGATCTATTTTCTGACTCACCTGCACTCCGACCACACCAAGGGCTTGTCTTCACAATGGTCTAAAGGTCCACTCTTCTGCTCTCGCCTCACCGCCAAACTCTTCCCCTTCAAATTCCCCAATTTCAACCTCTCCTTGCTCCGCGTCCTCGAAATCGGCGTCTGGCACTCAATCTCACTGATTTCACCTTCATCTGGTTCTCGTAAAGTTATCAAGGTCATGGCAATCGACGCTCACCATTGTCCTGGTAATCAAAGTTTCAAAGCTTTCATCTCGCTGTTTAATGAGTTGATCGGCAGTTGTTTGTTTTAAGTCCTGAAAGGAGTGGATTCTTTATCTAATTGTATGATAGGCGATTTTAAGATTTGTTTCGGTAGGAAGAATTATTGCATTTTGTATTTGGATTACGTTTATGTTCTGGTTAGTTTCTAGAGAGAATTAGTTGATCGAGCTTTTACTGTGCTGTTCCTTTTTTGCTACCGTCAGGTGCTGTTATGCTCTTGTTTCGTGGAGACTTTGGTTGTTTGCTTTACACTGGGGATTTTCGGTGGGAAATGAGTAGTGAAAGGGCGAATAAAGGAAGAATCACGCTTCTCAATGCACTCGAGGATGATACTGTCGATATTCTTTACTTGGATAATACCTACTGTAATCCCTCTTATGCCTTTCCTTCTCGACAAATTGCTGCACAGCAGGTTAAGATTTCTTTTAGATTGTTTCTTTATTCTTCCGCCATGTAATTTCATATTCTTGTAAGAATGAACTACACAGATGTTAGACTTAGATAAATGATGCTTGAAGACTGAAGGTTTTCTTTCCACTCAGCCATGAGGAAGCAGACATATCTGATGTTATTTCTATGTCATTATTCTCCTAGCTTTTGATTGAATTTCATGGAAATAACCCTTTTGAACCATAACGTTTATACATTGATATGGATTGTCACGAGGGAGATCTAGACCTAAAGAAGATTCTCTGACCTGATAGTATGCAAATGCATTGTGGAATGACATTGGGGAATGGAGTTTCTGTTGATGATTGGATTGGAGTTTCTTTAATTCTTGGGATGGGAAATGTACAACCAGTACCATGTCGTCTTCGTAATATGTTTTCTTTTGCTATTCTACCTTTCTAATGTTTTGCTTCTTGATTAATTGTTACAGATTGTTGATATCATTACCTCCCATCCGGAACATGATATCATCATTGGCATTGATTCGCTGGGGAAGGAAGATCTTTTACTTAACATTTCTCGCATGCTTGAATTGAAGGTTAGTTCAAAGTGAAGATGTGATTATCCTGCTCACTAATGTGTTTTGGAACAGTTTTCTTTTATTGAAGGGCACAATAAATTATCTGTGGAAGTGGTTTAGAAAACATGTAAACAAGTCATATGTTGACTAATTTAGCATGAAGATTCATTAGTTTGGTGCAAATAGTACCGTCTCTTCTCTGTGCAACATTGAGCAAAGATTTAAAATAGCTTCTTTAAAGAATTACTCCTATCTCGATTTTTTATGTTTAGGCAAGTAGGTACAAAATGTAGTAGGGGAAGTTAATATTTTATTATGAGGCTGATTATAAGGTAACTGTCGTGGTTTGACTTAATTGAGTTAAAAATGGGGAAGTTAGTGTCAAAGGAATATAGAAATATATCTGTTCAAACCCCATGTGGCCAACTGCCTAGAATACTAAAATCCTATGAATTTTGCCATGTTCAATGGCTGTCTTACTGATTTTCATTGCTGATCCTTTTATAAAAAAAATTAATTTCCTCTTGAAGGTTTGGGTGTGGCCAGAACGCTTGCAGACAATGCATCTTCTTGGTTTCAATGATGGATTCACTACGAAGACGAATCTTACTAGAGTTCGAGCTGTTCCTCGCTACAGCTTCAGCATAGATACTCTTGAGGGATTAAACCAGATGCGCCCAACCATCGGAATCATGCCATCAGGTCTTCCTTGGGTGGTAAAGCCCCATGAAGGACATGATATTCTTTCTGGTTCTCTTCTTACCGCACGTTATTGCAAAAGCAAGTTGAATGAAAATGGTGGCGTCTTGATTGAGAAGCAAATTGGAAAAGTAGAATCAGTAAACAAGTTGCACAAGTACATATTTTCAGTTCCATATTCGGACCATGCTTGCTTCTCAGAGATACAAGAGTTCATAAAGCTTGTCCGTCCAACAAACATCAAAGGCATCGTTTCTTCATCTTCTTGTTACATCGAACCGCTTTACTACTTTGGTCGCCTCTGTGGAGCAAAACAACCTGTAAAGAAGTTCCATCACAAGGAAAAAAGAAGAGGGAAAGTTGAAAAAGATGTTGACATTAACTTTGTTAACTCGGAGAAAAGACGAGTGAAAGGTACAAATGTAGGGATTCTGAATGTGGGCGTTCGTTTGGGTCGAGTGAGTGCATTGAGACGAGTCCAGCGTGGTGCGCGTCTTGCGGAAGATGATTGTCCTGGGTGA

mRNA sequence

TTTCTTTTGGAAATTCGAATCGAACTCCCACTCCGACTGCTGCAAATACCACGCCACCGCCGCCGCTGGATGGAGAATGGCCTGATTTCGGTGGACCAGTGGTCGGACGGTAGCCAGATCTATTTTCTGACTCACCTGCACTCCGACCACACCAAGGGCTTGTCTTCACAATGGTCTAAAGGTCCACTCTTCTGCTCTCGCCTCACCGCCAAACTCTTCCCCTTCAAATTCCCCAATTTCAACCTCTCCTTGCTCCGCGTCCTCGAAATCGGCGTCTGGCACTCAATCTCACTGATTTCACCTTCATCTGGTTCTCGTAAAGTTATCAAGGTCATGGCAATCGACGCTCACCATTGTCCTGGTAATCAAAGTTTCAAAGCTTTCATCTCGCTGTTTAATGAGTTGATCGGCAGCGATTTTAAGATTTGTTTCGGTAGGAAGAATTATTGCATTTTGTATTTGGATTACGTTTATGTTCTGAGAGAATTAGTTGATCGAGCTTTTACTGTGCTGTTCCTTTTTTGCTACCGTGCTGTTATGCTCTTGTTTCGTGGAGACTTTGGTTGTTTGCTTTACACTGGGGATTTTCGGTGGGAAATGAGTAGTGAAAGGGCGAATAAAGGAAGAATCACGCTTCTCAATGCACTCGAGGATGATACTGTCGATATTCTTTACTTGGATAATACCTACTGTAATCCCTCTTATGCCTTTCCTTCTCGACAAATTGCTGCACAGCAGATTGTTGATATCATTACCTCCCATCCGGAACATGATATCATCATTGGCATTGATTCGCTGGGGAAGGAAGATCTTTTACTTAACATTTCTCGCATGCTTGAATTGAAGGTTTGGGTGTGGCCAGAACGCTTGCAGACAATGCATCTTCTTGGTTTCAATGATGGATTCACTACGAAGACGAATCTTACTAGAGTTCGAGCTGTTCCTCGCTACAGCTTCAGCATAGATACTCTTGAGGGATTAAACCAGATGCGCCCAACCATCGGAATCATGCCATCAGGTCTTCCTTGGGTGGTAAAGCCCCATGAAGGACATGATATTCTTTCTGGTTCTCTTCTTACCGCACGTTATTGCAAAAGCAAGTTGAATGAAAATGGTGGCGTCTTGATTGAGAAGCAAATTGGAAAAGTAGAATCAGTAAACAAGTTGCACAAGTACATATTTTCAGTTCCATATTCGGACCATGCTTGCTTCTCAGAGATACAAGAGTTCATAAAGCTTGTCCGTCCAACAAACATCAAAGGCATCGTTTCTTCATCTTCTTGTTACATCGAACCGCTTTACTACTTTGGTCGCCTCTGTGGAGCAAAACAACCTGTAAAGAAGTTCCATCACAAGGAAAAAAGAAGAGGGAAAGTTGAAAAAGATGTTGACATTAACTTTGTTAACTCGGAGAAAAGACGAGTGAAAGGTACAAATGTAGGGATTCTGAATGTGGGCGTTCGTTTGGGTCGAGTGAGTGCATTGAGACGAGTCCAGCGTGGTGCGCGTCTTGCGGAAGATGATTGTCCTGGGTGA

Coding sequence (CDS)

TTTCTTTTGGAAATTCGAATCGAACTCCCACTCCGACTGCTGCAAATACCACGCCACCGCCGCCGCTGGATGGAGAATGGCCTGATTTCGGTGGACCAGTGGTCGGACGGTAGCCAGATCTATTTTCTGACTCACCTGCACTCCGACCACACCAAGGGCTTGTCTTCACAATGGTCTAAAGGTCCACTCTTCTGCTCTCGCCTCACCGCCAAACTCTTCCCCTTCAAATTCCCCAATTTCAACCTCTCCTTGCTCCGCGTCCTCGAAATCGGCGTCTGGCACTCAATCTCACTGATTTCACCTTCATCTGGTTCTCGTAAAGTTATCAAGGTCATGGCAATCGACGCTCACCATTGTCCTGGTAATCAAAGTTTCAAAGCTTTCATCTCGCTGTTTAATGAGTTGATCGGCAGCGATTTTAAGATTTGTTTCGGTAGGAAGAATTATTGCATTTTGTATTTGGATTACGTTTATGTTCTGAGAGAATTAGTTGATCGAGCTTTTACTGTGCTGTTCCTTTTTTGCTACCGTGCTGTTATGCTCTTGTTTCGTGGAGACTTTGGTTGTTTGCTTTACACTGGGGATTTTCGGTGGGAAATGAGTAGTGAAAGGGCGAATAAAGGAAGAATCACGCTTCTCAATGCACTCGAGGATGATACTGTCGATATTCTTTACTTGGATAATACCTACTGTAATCCCTCTTATGCCTTTCCTTCTCGACAAATTGCTGCACAGCAGATTGTTGATATCATTACCTCCCATCCGGAACATGATATCATCATTGGCATTGATTCGCTGGGGAAGGAAGATCTTTTACTTAACATTTCTCGCATGCTTGAATTGAAGGTTTGGGTGTGGCCAGAACGCTTGCAGACAATGCATCTTCTTGGTTTCAATGATGGATTCACTACGAAGACGAATCTTACTAGAGTTCGAGCTGTTCCTCGCTACAGCTTCAGCATAGATACTCTTGAGGGATTAAACCAGATGCGCCCAACCATCGGAATCATGCCATCAGGTCTTCCTTGGGTGGTAAAGCCCCATGAAGGACATGATATTCTTTCTGGTTCTCTTCTTACCGCACGTTATTGCAAAAGCAAGTTGAATGAAAATGGTGGCGTCTTGATTGAGAAGCAAATTGGAAAAGTAGAATCAGTAAACAAGTTGCACAAGTACATATTTTCAGTTCCATATTCGGACCATGCTTGCTTCTCAGAGATACAAGAGTTCATAAAGCTTGTCCGTCCAACAAACATCAAAGGCATCGTTTCTTCATCTTCTTGTTACATCGAACCGCTTTACTACTTTGGTCGCCTCTGTGGAGCAAAACAACCTGTAAAGAAGTTCCATCACAAGGAAAAAAGAAGAGGGAAAGTTGAAAAAGATGTTGACATTAACTTTGTTAACTCGGAGAAAAGACGAGTGAAAGGTACAAATGTAGGGATTCTGAATGTGGGCGTTCGTTTGGGTCGAGTGAGTGCATTGAGACGAGTCCAGCGTGGTGCGCGTCTTGCGGAAGATGATTGTCCTGGGTGA

Protein sequence

FLLEIRIELPLRLLQIPRHRRRWMENGLISVDQWSDGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKLFPFKFPNFNLSLLRVLEIGVWHSISLISPSSGSRKVIKVMAIDAHHCPGNQSFKAFISLFNELIGSDFKICFGRKNYCILYLDYVYVLRELVDRAFTVLFLFCYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDILSGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLVRPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDINFVNSEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDCPG

Homology

[Close]

BLAST of Lsi11G014990 vs. Swiss-Prot
Match: DCR1B_CHICK (5' exonuclease Apollo OS=Gallus gallus GN=DCLRE1B PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.9e-29
Identity = 74/170 (43.53%), Postives = 97/170 (57.06%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  +VM LF G FG +LYTGDFR+  + +R          AL    +D LYLDNT C P 
Sbjct: 94  CPGSVMFLFEGAFGTILYTGDFRYSPAMQREP--------ALSGRRIDRLYLDNTNCRPH 153

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVW--VWPERLQT 294
            A PSR  AA Q   +I  HP+H ++IG+ SLGKE+LL++++  LE   W  V P RL+ 
Sbjct: 154 GALPSRSRAALQAAQLIRRHPQHRVVIGVYSLGKEELLVDLA--LEFGTWVVVSPSRLEQ 213

Query: 295 MHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLP 343
           M LL   + FTT+    R+ AV       DTL   N + PTI I+P+G P
Sbjct: 214 MRLLELPEVFTTEEGAGRIHAVDVAEIRWDTLVSWNVLHPTIAILPTGRP 253

[Close]

BLAST of Lsi11G014990 vs. Swiss-Prot
Match: DCR1B_DANRE (5' exonuclease Apollo OS=Danio rerio GN=dclre1b PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.5e-29
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 1


Query: 155 DYVYVLRELVDRAFTVLFL---FCYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRIT 214
           D++ +L +L     TV  +    C  AVM LF+G FG  LYTGDFR+  S  R       
Sbjct: 78  DHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFGTRLYTGDFRYTPSMLRVP----C 137

Query: 215 LLNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDL 274
           L N +    +D+LYLDNT C+P+ A PSRQ A QQI  II  HP + ++IG+ SLGKE L
Sbjct: 138 LQNHIN---IDVLYLDNTNCDPTRALPSRQQATQQIKQIIRDHPGYAVVIGLYSLGKESL 197

Query: 275 LLNISRMLELKVWVW--PERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQ 334
           L++++  +E K WV    ERL+T+ +L   D FTT +   R+R V +   S   L   N+
Sbjct: 198 LVDLA--MEFKTWVEVDRERLETLRVLQLPDVFTTDSGAGRIRVVNQSMISASNLMAWNK 257

Query: 335 MRPTIGIMPSGLPWV 345
           ++ TI I+P+  P V
Sbjct: 258 LQSTIAILPTSRPMV 263

[Close]

BLAST of Lsi11G014990 vs. Swiss-Prot
Match: DCR1B_HUMAN (5' exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-27
Identity = 82/201 (40.80%), Postives = 106/201 (52.74%), Query Frame = 1


Query: 156 YVYVLRELVDRAFTVLFL---FCYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITL 215
           +V  L E+     TV  L    C  +VM LF G FG +LYTGDFR+  S  +  +  +TL
Sbjct: 78  HVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLK--EPALTL 137

Query: 216 LNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLL 275
                   +  LYLDNT CNP+   PSRQ AA QIV +I  HP+H+I IG+ SLGKE LL
Sbjct: 138 -----GKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLYSLGKESLL 197

Query: 276 LNISRMLELKVWV--WPERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQM 335
             ++  LE + WV   P RL+ + LLG  D FT +    R+ AV         +   NQ 
Sbjct: 198 EQLA--LEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSNMLRWNQT 257

Query: 336 RPTIGIMPSGLPWVVKPHEGH 352
            PTI I+P+      K H  H
Sbjct: 258 HPTIAILPTSR----KIHSSH 265

[Close]

BLAST of Lsi11G014990 vs. Swiss-Prot
Match: DCR1B_AILME (5' exonuclease Apollo OS=Ailuropoda melanoleuca GN=DCLRE1B PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-27
Identity = 79/201 (39.30%), Postives = 107/201 (53.23%), Query Frame = 1


Query: 156 YVYVLRELVDRAFTVLFL---FCYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITL 215
           +V  L E+     TV  +    C  +VM LF G FG +LYTGDFR+  S  +    ++  
Sbjct: 78  HVLPLDEIGRETMTVTLMDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALKL-- 137

Query: 216 LNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLL 275
                   +  LYLDNT CNP++  PSRQ AA+QIV++I  HP+H+I IG+ SLGKE LL
Sbjct: 138 -----GKQIHTLYLDNTNCNPAWVLPSRQEAARQIVELIRKHPQHNIKIGLYSLGKESLL 197

Query: 276 LNISRMLELKVWV--WPERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQM 335
             ++  LE + WV   P RL+ + LLG  D FT +    R+ AV         +   NQ 
Sbjct: 198 EQLA--LEFQTWVVLSPRRLELVQLLGLADVFTLEEKAGRIHAVDHMEICHSAMLHWNQT 257

Query: 336 RPTIGIMPSGLPWVVKPHEGH 352
            PTI I+P+      K H  H
Sbjct: 258 HPTIAILPTSR----KIHRSH 265

[Close]

BLAST of Lsi11G014990 vs. Swiss-Prot
Match: DCR1B_RAT (5' exonuclease Apollo OS=Rattus norvegicus GN=Dclre1b PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 4.0e-26
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1


Query: 156 YVYVLRELVDRAFTVLFL---FCYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITL 215
           +V +L E+     TV  +    C  +VM LF G FG +LYTGDFR+  S  +  +  +TL
Sbjct: 78  HVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLK--EPALTL 137

Query: 216 LNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLL 275
                   +  LYLDNT CNP+   PSRQ A QQI+ +I   P+H+I IG+ SLGKE LL
Sbjct: 138 -----GKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQFPQHNIKIGLYSLGKESLL 197

Query: 276 LNISRMLELKVWV--WPERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQM 335
             ++  LE + WV   P+RL+ + LLG  D FT +    R+ AV         +   NQ 
Sbjct: 198 EQLA--LEFQTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHMEICHSAMLQWNQT 257

Query: 336 RPTIGIMPS 340
            PTI I P+
Sbjct: 258 HPTIAIFPT 257

[Close]

BLAST of Lsi11G014990 vs. TrEMBL
Match: A0A0A0K5M7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045560 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 8.8e-166
Identity = 291/337 (86.35%), Postives = 307/337 (91.10%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  AVMLLFRGDFGCLLYTGDFRWEMSSERANKGRI LLNALED+TVD+LYLDNTYCNPS
Sbjct: 96  CPGAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRIALLNALEDNTVDVLYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           YAFPSR+IAA+QIVDII SHP+HDIIIG++SLGKEDLL++ISRML LKVWVWPERLQTMH
Sbjct: 156 YAFPSREIAARQIVDIIASHPQHDIIIGVNSLGKEDLLVHISRMLGLKVWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGFN+ FTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVV+PHEG  I 
Sbjct: 216 LLGFNNEFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVRPHEGDGIP 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
           SGSLL  RY +SKLNENG  LIEKQ GKVESV KLHKYIFSVPYSDHACFSEIQEFIKL+
Sbjct: 276 SGSLLITRYRQSKLNENGPFLIEKQTGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLI 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDINFVNSEKRR 474
            PT IKGIVSSSSCYIEPLYYFGRLCGAKQPV KFHHK++R  KVEKDVDI FVN +   
Sbjct: 336 CPTTIKGIVSSSSCYIEPLYYFGRLCGAKQPVNKFHHKKERTEKVEKDVDIKFVNWK--- 395

Query: 475 VKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDCPG 512
            KGTN GILN GVRLGRVSALRRVQRGARL EDDCPG
Sbjct: 396 -KGTNAGILNAGVRLGRVSALRRVQRGARLQEDDCPG 428

[Close]

BLAST of Lsi11G014990 vs. TrEMBL
Match: A0A061E4J0_THECC (DNA repair metallo-beta-lactamase family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_007852 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.2e-126
Identity = 223/344 (64.83%), Postives = 269/344 (78.20%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  AVM LFRG+FGCLL TGDFRWE +SERA  G   LLNAL+DD VD+LYLDNTYCNPS
Sbjct: 96  CPGAVMFLFRGEFGCLLNTGDFRWEKNSERAKLGSEMLLNALQDDVVDVLYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           Y FPSR++AAQQ+VDIITSHPEHDIIIG+D+LGKEDLLL+IS  L  K+WVWPERLQTMH
Sbjct: 156 YEFPSREVAAQQVVDIITSHPEHDIIIGVDTLGKEDLLLHISNALNTKIWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF+D FTTKT++TRVRAVPRYSFSI+TLEGLN MRPTIGI+PSGLPWVVKP EG D L
Sbjct: 216 LLGFHDIFTTKTSVTRVRAVPRYSFSIETLEGLNTMRPTIGIIPSGLPWVVKPIEGDDKL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
            GSLL ARY +SK++  GG   +K  G + SV + HKYI+SV YSDH+C+ EI+EFIKLV
Sbjct: 276 FGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYSDHSCYQEIEEFIKLV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDIN-------- 474
            P N+KGIVSSSSCY++PLYYFGRLCG  QP++  HH+ +++ + ++ V ++        
Sbjct: 336 HPANMKGIVSSSSCYVDPLYYFGRLCGKNQPLQGLHHQHQKKERGDRVVPVHTNSKFRSG 395

Query: 475 -FVNSEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            +   EK+R K        +GV L  VS LRR QRG +LAE++C
Sbjct: 396 CYSGVEKKRKKVVG----RLGVHLSWVSVLRRAQRGVKLAENEC 435

[Close]

BLAST of Lsi11G014990 vs. TrEMBL
Match: A0A061E3R5_THECC (DNA repair metallo-beta-lactamase family protein isoform 2 OS=Theobroma cacao GN=TCM_007852 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.4e-125
Identity = 221/340 (65.00%), Postives = 267/340 (78.53%), Query Frame = 1


Query: 179 VMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPSYAFP 238
           VM LFRG+FGCLL TGDFRWE +SERA  G   LLNAL+DD VD+LYLDNTYCNPSY FP
Sbjct: 98  VMFLFRGEFGCLLNTGDFRWEKNSERAKLGSEMLLNALQDDVVDVLYLDNTYCNPSYEFP 157

Query: 239 SRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMHLLGF 298
           SR++AAQQ+VDIITSHPEHDIIIG+D+LGKEDLLL+IS  L  K+WVWPERLQTMHLLGF
Sbjct: 158 SREVAAQQVVDIITSHPEHDIIIGVDTLGKEDLLLHISNALNTKIWVWPERLQTMHLLGF 217

Query: 299 NDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDILSGSL 358
           +D FTTKT++TRVRAVPRYSFSI+TLEGLN MRPTIGI+PSGLPWVVKP EG D L GSL
Sbjct: 218 HDIFTTKTSVTRVRAVPRYSFSIETLEGLNTMRPTIGIIPSGLPWVVKPIEGDDKLFGSL 277

Query: 359 LTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLVRPTN 418
           L ARY +SK++  GG   +K  G + SV + HKYI+SV YSDH+C+ EI+EFIKLV P N
Sbjct: 278 LVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYSDHSCYQEIEEFIKLVHPAN 337

Query: 419 IKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDIN---------FVN 478
           +KGIVSSSSCY++PLYYFGRLCG  QP++  HH+ +++ + ++ V ++         +  
Sbjct: 338 MKGIVSSSSCYVDPLYYFGRLCGKNQPLQGLHHQHQKKERGDRVVPVHTNSKFRSGCYSG 397

Query: 479 SEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            EK+R K        +GV L  VS LRR QRG +LAE++C
Sbjct: 398 VEKKRKKVVG----RLGVHLSWVSVLRRAQRGVKLAENEC 433

[Close]

BLAST of Lsi11G014990 vs. TrEMBL
Match: W9RNI1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022221 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-123
Identity = 219/340 (64.41%), Postives = 264/340 (77.65%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  A+M LFRGDFGCLLYTGDFRWE++S+RAN  R TLLNAL   +VDILYLDNTYCNPS
Sbjct: 96  CPGAIMFLFRGDFGCLLYTGDFRWEVTSDRANLARNTLLNALNGSSVDILYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           + FP R+  AQQIVDII SHP+HDIIIGIDSLGKEDLLL+ISR+L++K+WVWPERLQTMH
Sbjct: 156 HDFPPREFTAQQIVDIIASHPDHDIIIGIDSLGKEDLLLHISRVLKIKIWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF++ FTTKT+LTRVRAVPRYSFS++TLEGLN MRPTIGIMPSGLPWVVKP EG D L
Sbjct: 216 LLGFDEMFTTKTSLTRVRAVPRYSFSVETLEGLNTMRPTIGIMPSGLPWVVKPSEGSDNL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
            GSLLT+RY  SK  ENGG    K  G + S  + HKYI+SV YSDH+ +SEI+ FIKLV
Sbjct: 276 FGSLLTSRYNISKCTENGGARTYKSNGSLGSTERFHKYIYSVSYSDHSSYSEIENFIKLV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGK-----VEKDVDINFVN 474
           +P N+KGIVSSS+CY++P+YYFGRLCG  QP ++   K KR+       V K +    ++
Sbjct: 336 QPANMKGIVSSSTCYVDPMYYFGRLCGVNQPAQRLRQKHKRKESDEITLVTKSIFGRNIS 395

Query: 475 SEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            E  +    N+ +  V  +  RVS+ RRV+ GA++ EDDC
Sbjct: 396 EELVKKLARNMKVKYVRAQASRVSSRRRVRCGAKILEDDC 435

[Close]

BLAST of Lsi11G014990 vs. TrEMBL
Match: B9S9Q1_RICCO (DNA cross-link repair protein pso2/snm1, putative OS=Ricinus communis GN=RCOM_0507600 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 6.2e-119
Identity = 219/341 (64.22%), Postives = 260/341 (76.25%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  AVMLLFRGDFGCLLYTGDFRWE +SER   G   LLNAL+DD+VDILYLDNTYCNPS
Sbjct: 96  CPGAVMLLFRGDFGCLLYTGDFRWEATSERGKIGSNMLLNALKDDSVDILYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           + FP R +AA+Q+VDII SHP HDIIIGIDSLGKEDLLL+ISRML +K+WVWPERLQTMH
Sbjct: 156 FDFPPRHVAARQVVDIIASHPGHDIIIGIDSLGKEDLLLHISRMLNIKIWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF+D FTTKT+ TRVRAVPRYSFSI+TLE LN+M PTIGIMPSGLPWVVKP +G D L
Sbjct: 216 LLGFHDIFTTKTSQTRVRAVPRYSFSINTLEELNKMHPTIGIMPSGLPWVVKPTKGDDNL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
            GS LT+RY   KL+ NGG   +K  G V+SV +LH+YI+SVPYSDH+CFSEIQEFI+LV
Sbjct: 276 FGSFLTSRYKNGKLSANGGTGTDKLNGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVD------INFV 474
           +PT++KGIVSSSSCYI P+YYFGRLC      ++   K +++  V+          I   
Sbjct: 336 QPTSMKGIVSSSSCYINPVYYFGRLCRENWSAQRMRDKYEKKEVVDVQTKSYCGKYIPMG 395

Query: 475 NSEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            ++KRR             R+ RV ALRR++ GA++ E  C
Sbjct: 396 AAKKRRTG-----------RVSRVRALRRIRHGAKIEEYYC 425

[Close]

BLAST of Lsi11G014990 vs. TAIR10
Match: AT1G27410.1 (AT1G27410.1 DNA repair metallo-beta-lactamase family protein)

HSP 1 Score: 365.5 bits (937), Expect = 5.2e-101
Identity = 173/271 (63.84%), Postives = 215/271 (79.34%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  ++M LFRGDFGC LYTGDFRW+  S+ +++ R TL+ A+++  VDILYLDNTYCNP 
Sbjct: 96  CPGSIMFLFRGDFGCFLYTGDFRWD--SDASDEARTTLVAAIDEFPVDILYLDNTYCNPI 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           Y+FPSR +A Q + DII SHP HDIII +DSLGKEDLL+++SR+L +K+WVWPERL+TMH
Sbjct: 156 YSFPSRLVAVQLVADIIASHPSHDIIIAVDSLGKEDLLVHVSRILNIKIWVWPERLRTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF D FTT T+LTRVRAVPRYSFSI TLEGLN M PTIGIMPSGLPWV +P +G D L
Sbjct: 216 LLGFQDIFTTDTSLTRVRAVPRYSFSIQTLEGLNTMCPTIGIMPSGLPWVKRPFKGDDKL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
           SGS LTA        +N  V  +K++ +  +V+K H Y++SV YSDH+C+ EI EFIKLV
Sbjct: 276 SGSFLTASM------KNETVSAKKEL-EAAAVHKFHDYMYSVHYSDHSCYEEIGEFIKLV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQP 446
           +P ++KGIV SSS Y++PLYYFGR+CGA QP
Sbjct: 336 KPKSMKGIVVSSSSYVDPLYYFGRICGANQP 357

[Close]

BLAST of Lsi11G014990 vs. TAIR10
Match: AT3G26680.1 (AT3G26680.1 DNA repair metallo-beta-lactamase family protein)

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 74/262 (28.24%), Postives = 124/262 (47.33%), Query Frame = 1


Query: 175 CYRAVMLLFRG-DFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNP 234
           C  A ++ FR  D  C L+TGDFR       A+K ++     L +  V +LYLD TYCNP
Sbjct: 239 CPGAALIHFRLLDGTCYLHTGDFR-------ASK-QMQTHPLLFNQRVHVLYLDTTYCNP 298

Query: 235 SYAFPSRQIAAQQIV----DIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPER 294
            Y FPS++     +V    D +   P+  I++G  S+GKE + L I++ L +K++    R
Sbjct: 299 RYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASR 358

Query: 295 LQTMHLLGFND---GFTTKTNLTRVRAVPRYSFSIDTL-EGLNQMRPTIGIMPSGLPWVV 354
            + +   G++D     +T    T +  +P  S  ++ L E L   R   G + +  P   
Sbjct: 359 RRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLKIYREQYGAVLAFRP--- 418

Query: 355 KPHEGHDILSGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFS 414
                         T      K+ E+  ++     GK+         I+ VPYS+H+ F+
Sbjct: 419 --------------TGWTYSEKIGEHLDLIKPTSRGKIT--------IYGVPYSEHSSFT 467

Query: 415 EIQEFIKLVRPTNIKGIVSSSS 428
           E++EF++ +RP  I   V++ +
Sbjct: 479 ELREFVQFLRPDKIIPTVNNGN 467

[Close]

BLAST of Lsi11G014990 vs. TAIR10
Match: AT2G45700.1 (AT2G45700.1 sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-18
Identity = 76/258 (29.46%), Postives = 122/258 (47.29%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFG-CLLYTGDFRW--EMSSERANKGRITLLNALEDDTVDILYLDNTYC 234
           C  ++M+LF    G  +L+TGDFR+  EMS            N L    +  L LD TYC
Sbjct: 485 CPGSIMILFEPANGKAVLHTGDFRYSEEMS------------NWLIGSHISSLILDTTYC 544

Query: 235 NPSYAFPSRQIAAQQIVDIITS---HPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPE 294
           NP Y FP ++   Q +V+ I +   +P+   +IG  ++GKE L L ++R+L  K+++ P 
Sbjct: 545 NPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIYINPA 604

Query: 295 RLQTMHLLGFNDG----FTTKTNLTRVRAVPRYSF-SIDTLEGL-----NQMRPTIGIMP 354
           +L+ +  LGF+      FT K   + +  VP ++  S   L+ +     N+    +   P
Sbjct: 605 KLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIVAFSP 664

Query: 355 SGLPWVVKPHEGHDILSGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPY 414
           +G  W           SG        K+K    G  L +  I + E           VPY
Sbjct: 665 TG--WT----------SG--------KTKKKSPGRRLQQGTIIRYE-----------VPY 699

Query: 415 SDHACFSEIQEFIKLVRP 417
           S+H+ F+E++EF++ V P
Sbjct: 725 SEHSSFTELKEFVQKVSP 699

[Close]

BLAST of Lsi11G014990 vs. TAIR10
Match: AT1G19025.1 (AT1G19025.1 DNA repair metallo-beta-lactamase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-09
Identity = 37/116 (31.90%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGR-ITLLNALEDD-TVDILYLDNTYCN 234
           C  AVM LF G FG +L+TGD R  +    +   + +   + ++   ++  ++LD T+  
Sbjct: 102 CPGAVMFLFEGSFGNILHTGDCRLTLDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGK 161

Query: 235 PSYA--FPSRQIAAQQIVDIITSHPEHDII-IGIDSLGKEDLLLNISRMLELKVWV 286
            S++  FP++  A +QI++ I +HP+  ++ +  D LG+ED+LL +SR    K++V
Sbjct: 162 SSHSQRFPTKHSAIRQIINCIWNHPDAPVVYLACDMLGQEDVLLEVSRTFGSKIYV 217

[Close]

BLAST of Lsi11G014990 vs. TAIR10
Match: AT1G66730.1 (AT1G66730.1 DNA LIGASE 6)

HSP 1 Score: 59.7 bits (143), Expect = 6.1e-09
Identity = 36/111 (32.43%), Postives = 55/111 (49.55%), Query Frame = 1


Query: 38  SQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKLFPFKFPNFNLSLLRVLEIGVWHSIS 97
           S  +FL+H HSDH  GLSS WSKG ++CS  TA+L           +  +L++      +
Sbjct: 78  SVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARL-----------VAEILQVPSQFVFA 137

Query: 98  LISPSSGSRKVIKVMAIDAHHCPGNQSFKAFISL----FNELIGS-DFKIC 144
           L           +V+ I+A+HCPG   F   + L    F + + + DF+ C
Sbjct: 138 LPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFC 177

[Close]

BLAST of Lsi11G014990 vs. NCBI nr
Match: gi|659110707|ref|XP_008455369.1| (PREDICTED: 5' exonuclease Apollo [Cucumis melo])

HSP 1 Score: 699.1 bits (1803), Expect = 5.6e-198
Identity = 365/486 (75.10%), Postives = 386/486 (79.42%), Query Frame = 1


Query: 24  MENGLISVDQWSDGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKLFPFKFPNFNLS 83
           MENGLISVD+WSDGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKLFPFKFPNFNLS
Sbjct: 1   MENGLISVDRWSDGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKLFPFKFPNFNLS 60

Query: 84  LLRVLEIGVWHSISLISPSSGSRKVIKVMAIDAHHCPGNQSFKAFISLFNELIGSDFKIC 143
           L                        ++V+ I   H          ISL +   GS     
Sbjct: 61  L------------------------LRVLEIGLWH---------SISLISPSSGS----- 120

Query: 144 FGRKNYCILYLDYVYVLRELVDRAFTVLFLFCYRAVMLLFRGDFGCLLYTGDFRWEMSSE 203
             RK   +L +D  +                C  AVMLLFRGDFGCL+YTGDFRWEMSSE
Sbjct: 121 --RKVIKVLAIDAHH----------------CPGAVMLLFRGDFGCLMYTGDFRWEMSSE 180

Query: 204 RANKGRITLLNALEDDTVDILYLDNTYCNPSYAFPSRQIAAQQIVDIITSHPEHDIIIGI 263
           RANKGRI LLNALED+TVDILYLDNTYCNPSYAFPSR+IAA+QIVDII SHP+HDIIIGI
Sbjct: 181 RANKGRIALLNALEDNTVDILYLDNTYCNPSYAFPSREIAARQIVDIIASHPQHDIIIGI 240

Query: 264 DSLGKEDLLLNISRMLELKVWVWPERLQTMHLLGFNDGFTTKTNLTRVRAVPRYSFSIDT 323
           +SLGKEDLL++ISRML LKVWVWPERLQTMHLLGFND FTTKTNLTRVRAVPRYSFSIDT
Sbjct: 241 NSLGKEDLLVHISRMLGLKVWVWPERLQTMHLLGFNDEFTTKTNLTRVRAVPRYSFSIDT 300

Query: 324 LEGLNQMRPTIGIMPSGLPWVVKPHEGHDILSGSLLTARYCKSKLNENGGVLIEKQIGKV 383
           LEGLNQMRPTIGIMPSGLPWVV+PHEG  I SGSLLT RY +SKLNENG  LIEKQ GKV
Sbjct: 301 LEGLNQMRPTIGIMPSGLPWVVRPHEGDGIHSGSLLTTRYRRSKLNENGRFLIEKQTGKV 360

Query: 384 ESVNKLHKYIFSVPYSDHACFSEIQEFIKLVRPTNIKGIVSSSSCYIEPLYYFGRLCGAK 443
           ESV KLH YIFSVPYSDHACFSEIQEFIKLVRPT IKGIVSSSSCYIEPLYYFGRLCGAK
Sbjct: 361 ESVTKLHNYIFSVPYSDHACFSEIQEFIKLVRPTTIKGIVSSSSCYIEPLYYFGRLCGAK 420

Query: 444 QPVKKFHHKEKRRGKVEKDVDINFVNSEKRRVKGTNVGILNVGVRLGRVSALRRVQRGAR 503
           QPV KFHHK+K   KVEK+VDI FVNS+    KGTN GILN GVRLGRVSALRRVQRGAR
Sbjct: 421 QPVNKFHHKKKGTEKVEKNVDIKFVNSK----KGTNAGILNAGVRLGRVSALRRVQRGAR 426

Query: 504 LAEDDC 510
           L EDDC
Sbjct: 481 LPEDDC 426

[Close]

BLAST of Lsi11G014990 vs. NCBI nr
Match: gi|449453656|ref|XP_004144572.1| (PREDICTED: 5' exonuclease Apollo [Cucumis sativus])

HSP 1 Score: 591.7 bits (1524), Expect = 1.3e-165
Identity = 291/337 (86.35%), Postives = 307/337 (91.10%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  AVMLLFRGDFGCLLYTGDFRWEMSSERANKGRI LLNALED+TVD+LYLDNTYCNPS
Sbjct: 96  CPGAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRIALLNALEDNTVDVLYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           YAFPSR+IAA+QIVDII SHP+HDIIIG++SLGKEDLL++ISRML LKVWVWPERLQTMH
Sbjct: 156 YAFPSREIAARQIVDIIASHPQHDIIIGVNSLGKEDLLVHISRMLGLKVWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGFN+ FTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVV+PHEG  I 
Sbjct: 216 LLGFNNEFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVRPHEGDGIP 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
           SGSLL  RY +SKLNENG  LIEKQ GKVESV KLHKYIFSVPYSDHACFSEIQEFIKL+
Sbjct: 276 SGSLLITRYRQSKLNENGPFLIEKQTGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLI 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDINFVNSEKRR 474
            PT IKGIVSSSSCYIEPLYYFGRLCGAKQPV KFHHK++R  KVEKDVDI FVN +   
Sbjct: 336 CPTTIKGIVSSSSCYIEPLYYFGRLCGAKQPVNKFHHKKERTEKVEKDVDIKFVNWK--- 395

Query: 475 VKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDCPG 512
            KGTN GILN GVRLGRVSALRRVQRGARL EDDCPG
Sbjct: 396 -KGTNAGILNAGVRLGRVSALRRVQRGARLQEDDCPG 428

[Close]

BLAST of Lsi11G014990 vs. NCBI nr
Match: gi|590690118|ref|XP_007043420.1| (DNA repair metallo-beta-lactamase family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 459.5 bits (1181), Expect = 7.5e-126
Identity = 223/344 (64.83%), Postives = 269/344 (78.20%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  AVM LFRG+FGCLL TGDFRWE +SERA  G   LLNAL+DD VD+LYLDNTYCNPS
Sbjct: 96  CPGAVMFLFRGEFGCLLNTGDFRWEKNSERAKLGSEMLLNALQDDVVDVLYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           Y FPSR++AAQQ+VDIITSHPEHDIIIG+D+LGKEDLLL+IS  L  K+WVWPERLQTMH
Sbjct: 156 YEFPSREVAAQQVVDIITSHPEHDIIIGVDTLGKEDLLLHISNALNTKIWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF+D FTTKT++TRVRAVPRYSFSI+TLEGLN MRPTIGI+PSGLPWVVKP EG D L
Sbjct: 216 LLGFHDIFTTKTSVTRVRAVPRYSFSIETLEGLNTMRPTIGIIPSGLPWVVKPIEGDDKL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
            GSLL ARY +SK++  GG   +K  G + SV + HKYI+SV YSDH+C+ EI+EFIKLV
Sbjct: 276 FGSLLVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYSDHSCYQEIEEFIKLV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDIN-------- 474
            P N+KGIVSSSSCY++PLYYFGRLCG  QP++  HH+ +++ + ++ V ++        
Sbjct: 336 HPANMKGIVSSSSCYVDPLYYFGRLCGKNQPLQGLHHQHQKKERGDRVVPVHTNSKFRSG 395

Query: 475 -FVNSEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            +   EK+R K        +GV L  VS LRR QRG +LAE++C
Sbjct: 396 CYSGVEKKRKKVVG----RLGVHLSWVSVLRRAQRGVKLAENEC 435

[Close]

BLAST of Lsi11G014990 vs. NCBI nr
Match: gi|590690122|ref|XP_007043421.1| (DNA repair metallo-beta-lactamase family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 456.8 bits (1174), Expect = 4.9e-125
Identity = 221/340 (65.00%), Postives = 267/340 (78.53%), Query Frame = 1


Query: 179 VMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPSYAFP 238
           VM LFRG+FGCLL TGDFRWE +SERA  G   LLNAL+DD VD+LYLDNTYCNPSY FP
Sbjct: 98  VMFLFRGEFGCLLNTGDFRWEKNSERAKLGSEMLLNALQDDVVDVLYLDNTYCNPSYEFP 157

Query: 239 SRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMHLLGF 298
           SR++AAQQ+VDIITSHPEHDIIIG+D+LGKEDLLL+IS  L  K+WVWPERLQTMHLLGF
Sbjct: 158 SREVAAQQVVDIITSHPEHDIIIGVDTLGKEDLLLHISNALNTKIWVWPERLQTMHLLGF 217

Query: 299 NDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDILSGSL 358
           +D FTTKT++TRVRAVPRYSFSI+TLEGLN MRPTIGI+PSGLPWVVKP EG D L GSL
Sbjct: 218 HDIFTTKTSVTRVRAVPRYSFSIETLEGLNTMRPTIGIIPSGLPWVVKPIEGDDKLFGSL 277

Query: 359 LTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLVRPTN 418
           L ARY +SK++  GG   +K  G + SV + HKYI+SV YSDH+C+ EI+EFIKLV P N
Sbjct: 278 LVARYNRSKVSSKGGKQNDKMDGNLGSVKRFHKYIYSVQYSDHSCYQEIEEFIKLVHPAN 337

Query: 419 IKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGKVEKDVDIN---------FVN 478
           +KGIVSSSSCY++PLYYFGRLCG  QP++  HH+ +++ + ++ V ++         +  
Sbjct: 338 MKGIVSSSSCYVDPLYYFGRLCGKNQPLQGLHHQHQKKERGDRVVPVHTNSKFRSGCYSG 397

Query: 479 SEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            EK+R K        +GV L  VS LRR QRG +LAE++C
Sbjct: 398 VEKKRKKVVG----RLGVHLSWVSVLRRAQRGVKLAENEC 433

[Close]

BLAST of Lsi11G014990 vs. NCBI nr
Match: gi|703096514|ref|XP_010095864.1| (hypothetical protein L484_022221 [Morus notabilis])

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 219/340 (64.41%), Postives = 264/340 (77.65%), Query Frame = 1


Query: 175 CYRAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRITLLNALEDDTVDILYLDNTYCNPS 234
           C  A+M LFRGDFGCLLYTGDFRWE++S+RAN  R TLLNAL   +VDILYLDNTYCNPS
Sbjct: 96  CPGAIMFLFRGDFGCLLYTGDFRWEVTSDRANLARNTLLNALNGSSVDILYLDNTYCNPS 155

Query: 235 YAFPSRQIAAQQIVDIITSHPEHDIIIGIDSLGKEDLLLNISRMLELKVWVWPERLQTMH 294
           + FP R+  AQQIVDII SHP+HDIIIGIDSLGKEDLLL+ISR+L++K+WVWPERLQTMH
Sbjct: 156 HDFPPREFTAQQIVDIIASHPDHDIIIGIDSLGKEDLLLHISRVLKIKIWVWPERLQTMH 215

Query: 295 LLGFNDGFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSGLPWVVKPHEGHDIL 354
           LLGF++ FTTKT+LTRVRAVPRYSFS++TLEGLN MRPTIGIMPSGLPWVVKP EG D L
Sbjct: 216 LLGFDEMFTTKTSLTRVRAVPRYSFSVETLEGLNTMRPTIGIMPSGLPWVVKPSEGSDNL 275

Query: 355 SGSLLTARYCKSKLNENGGVLIEKQIGKVESVNKLHKYIFSVPYSDHACFSEIQEFIKLV 414
            GSLLT+RY  SK  ENGG    K  G + S  + HKYI+SV YSDH+ +SEI+ FIKLV
Sbjct: 276 FGSLLTSRYNISKCTENGGARTYKSNGSLGSTERFHKYIYSVSYSDHSSYSEIENFIKLV 335

Query: 415 RPTNIKGIVSSSSCYIEPLYYFGRLCGAKQPVKKFHHKEKRRGK-----VEKDVDINFVN 474
           +P N+KGIVSSS+CY++P+YYFGRLCG  QP ++   K KR+       V K +    ++
Sbjct: 336 QPANMKGIVSSSTCYVDPMYYFGRLCGVNQPAQRLRQKHKRKESDEITLVTKSIFGRNIS 395

Query: 475 SEKRRVKGTNVGILNVGVRLGRVSALRRVQRGARLAEDDC 510
            E  +    N+ +  V  +  RVS+ RRV+ GA++ EDDC
Sbjct: 396 EELVKKLARNMKVKYVRAQASRVSSRRRVRCGAKILEDDC 435

The following BLAST results are available for this feature:

BLAST of Lsi11G014990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DCR1B_CHICK	2.9e-29	43.53	5' exonuclease Apollo OS=Gallus gallus GN=DCLRE1B PE=2 SV=1	[more]
DCR1B_DANRE	6.5e-29	41.54	5' exonuclease Apollo OS=Danio rerio GN=dclre1b PE=2 SV=1	[more]
DCR1B_HUMAN	2.1e-27	40.80	5' exonuclease Apollo OS=Homo sapiens GN=DCLRE1B PE=1 SV=1	[more]
DCR1B_AILME	2.7e-27	39.30	5' exonuclease Apollo OS=Ailuropoda melanoleuca GN=DCLRE1B PE=3 SV=1	[more]
DCR1B_RAT	4.0e-26	40.21	5' exonuclease Apollo OS=Rattus norvegicus GN=Dclre1b PE=1 SV=2	[more]

BLAST of Lsi11G014990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5M7_CUCSA	8.8e-166	86.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045560 PE=4 SV=1	[more]
A0A061E4J0_THECC	5.2e-126	64.83	DNA repair metallo-beta-lactamase family protein, putative isoform 1 OS=Theobrom...	[more]
A0A061E3R5_THECC	3.4e-125	65.00	DNA repair metallo-beta-lactamase family protein isoform 2 OS=Theobroma cacao GN...	[more]
W9RNI1_9ROSA	1.1e-123	64.41	Uncharacterized protein OS=Morus notabilis GN=L484_022221 PE=4 SV=1	[more]
B9S9Q1_RICCO	6.2e-119	64.22	DNA cross-link repair protein pso2/snm1, putative OS=Ricinus communis GN=RCOM_05...	[more]

BLAST of Lsi11G014990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27410.1	5.2e-101	63.84	DNA repair metallo-beta-lactamase family protein	[more]
AT3G26680.1	3.4e-20	28.24	DNA repair metallo-beta-lactamase family protein	[more]
AT2G45700.1	1.9e-18	29.46	sterile alpha motif (SAM) domain-containing protein	[more]
AT1G19025.1	1.2e-09	31.90	DNA repair metallo-beta-lactamase family protein	[more]
AT1G66730.1	6.1e-09	32.43	DNA LIGASE 6	[more]

BLAST of Lsi11G014990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110707\|ref\|XP_008455369.1\|	5.6e-198	75.10	PREDICTED: 5' exonuclease Apollo [Cucumis melo]	[more]
gi\|449453656\|ref\|XP_004144572.1\|	1.3e-165	86.35	PREDICTED: 5' exonuclease Apollo [Cucumis sativus]	[more]
gi\|590690118\|ref\|XP_007043420.1\|	7.5e-126	64.83	DNA repair metallo-beta-lactamase family protein, putative isoform 1 [Theobroma ...	[more]
gi\|590690122\|ref\|XP_007043421.1\|	4.9e-125	65.00	DNA repair metallo-beta-lactamase family protein isoform 2 [Theobroma cacao]	[more]
gi\|703096514\|ref\|XP_010095864.1\|	1.6e-123	64.41	hypothetical protein L484_022221 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011084	DRMBL
IPR001279	Metallo-B-lactamas

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004527	exonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G014990.1	Lsi11G014990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	GENE3D	G3DSA:3.60.15.10		coord: 38..125 score: 1.0E-18coord: 182..285 score: 1.0
IPR001279	Metallo-beta-lactamase	unknown	SSF56281	Metallo-hydrolase/oxidoreductase	coord: 178..341 score: 1.67E-21coord: 389..419 score: 1.67E-21coord: 41..121 score: 1.67
IPR011084	DNA repair metallo-beta-lactamase	PFAM	PF07522	DRMBL	coord: 302..426 score: 4.6
None	No IPR available	PANTHER	PTHR23240	DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED	coord: 24..120 score: 2.0E-209coord: 372..474 score: 2.0E-209coord: 177..346 score: 2.0E
None	No IPR available	PANTHER	PTHR23240:SF9	SUBFAMILY NOT NAMED	coord: 177..346 score: 2.0E-209coord: 372..474 score: 2.0E-209coord: 24..120 score: 2.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G014990	Csa7G045560	Cucumber (Chinese Long) v2	culsiB494
Lsi11G014990	CSPI07G04140	Wild cucumber (PI 183967)	cpilsiB505
Lsi11G014990	Cucsa.148120	Cucumber (Gy14) v1	cgylsiB237
Lsi11G014990	CmaCh19G009520	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G014990	CmoCh19G009820	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G014990	MELO3C018779	Melon (DHL92) v3.5.1	lsimeB095
Lsi11G014990	ClCG02G001500	Watermelon (Charleston Gray)	lsiwcgB093
Lsi11G014990	MELO3C018779.2	Melon (DHL92) v3.6.1	lsimedB101
Lsi11G014990	Cla97C02G027960	Watermelon (97103) v2	lsiwmbB085
Lsi11G014990	Bhi05G001557	Wax gourd	lsiwgoB116
Lsi11G014990	Cp4.1LG15g07750	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G014990	CsGy7G003780	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G014990	Carg19204	Silver-seed gourd	carlsiB795
Lsi11G014990	CsaV3_7G004000	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G014990	Bottle gourd (USVL1VR-Ls)	lsilsiB024
Lsi11G014990	Bottle gourd (USVL1VR-Ls)	lsilsiB048
Lsi11G014990	Bottle gourd (USVL1VR-Ls)	lsilsiB049
Lsi11G014990	Cucumber (Gy14) v1	cgylsiB021
Lsi11G014990	Cucurbita maxima (Rimu)	cmalsiB091
Lsi11G014990	Cucurbita maxima (Rimu)	cmalsiB198
Lsi11G014990	Cucurbita maxima (Rimu)	cmalsiB513
Lsi11G014990	Cucurbita maxima (Rimu)	cmalsiB561
Lsi11G014990	Cucurbita maxima (Rimu)	cmalsiB785
Lsi11G014990	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G014990	Cucurbita moschata (Rifu)	cmolsiB188
Lsi11G014990	Cucurbita moschata (Rifu)	cmolsiB499
Lsi11G014990	Cucurbita moschata (Rifu)	cmolsiB544
Lsi11G014990	Cucurbita moschata (Rifu)	cmolsiB581
Lsi11G014990	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G014990	Cucurbita pepo (Zucchini)	cpelsiB606
Lsi11G014990	Wild cucumber (PI 183967)	cpilsiB011
Lsi11G014990	Wild cucumber (PI 183967)	cpilsiB430
Lsi11G014990	Cucumber (Chinese Long) v2	culsiB012
Lsi11G014990	Melon (DHL92) v3.5.1	lsimeB090
Lsi11G014990	Melon (DHL92) v3.5.1	lsimeB119
Lsi11G014990	Watermelon (Charleston Gray)	lsiwcgB104
Lsi11G014990	Watermelon (Charleston Gray)	lsiwcgB089
Lsi11G014990	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G014990	Watermelon (97103) v1	lsiwmB093
Lsi11G014990	Watermelon (97103) v1	lsiwmB099
Lsi11G014990	Watermelon (97103) v1	lsiwmB100
Lsi11G014990	Melon (DHL92) v3.6.1	lsimedB096
Lsi11G014990	Melon (DHL92) v3.6.1	lsimedB126
Lsi11G014990	Silver-seed gourd	carlsiB028
Lsi11G014990	Silver-seed gourd	carlsiB584
Lsi11G014990	Silver-seed gourd	carlsiB659
Lsi11G014990	Cucumber (Chinese Long) v3	cuclsiB009
Lsi11G014990	Cucumber (Chinese Long) v3	cuclsiB453
Lsi11G014990	Watermelon (97103) v2	lsiwmbB073
Lsi11G014990	Watermelon (97103) v2	lsiwmbB086
Lsi11G014990	Watermelon (97103) v2	lsiwmbB092
Lsi11G014990	Wax gourd	lsiwgoB131
Lsi11G014990	Wax gourd	lsiwgoB129
Lsi11G014990	Wax gourd	lsiwgoB130