Lsi11G013000 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G013000
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ABC-type transport system protein
Location	chr11 : 21627802 .. 21633405 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGAGATATTCATGTGCAGGTTGTAACATGTTCTGTGTCGTTACCCTCGTCCTTGGTTACCCTTCCACATAGATCTTCAAATAGGTTGTCTTATCATCTCCCATTGGGTCTGAAATCACAAGTAAAGAAGATAAAGGCTACATCTGATGATGCTGGACATAGTCAGCCCCCTTCATCTTCAGAAAGAAGGAATCCACTTTCCCTTATTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTGATTTTGGGTTCGGTCGAAGGAGCATATGGGAAGGTGGGGCCGTTGGGTTGTTCCTAGTGTCAGCTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCAAAATTTAGAAAATACTTGGCTGTCTTCAAGTTTGCTCATGCTAGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGAGTTACTGTTGGCAATGTCATTCGTGTTAACCCTTCCGTGAGATGTATTGAAACTATTGTTGAGGTATGCTTCTATAGATCCTTTCTCTGTTTGACCGGAACTTACTATTTTATTTTACTAAGAATGTGTTTGAGATGGCTTTTGAAAAAGAAACGCTTTTAAATGAAAGCACTTTTTCTATAAGTACTTTGGGAAGAAGCATTAACAATTGTTTCTCCTAGAAGAACTTTGAATGTTTTTAGGATTTAAAAAATCACTTTTGATTATCTAACCAAAACTATAAAAATCTTGAAAAATACTTTTAACGAACTGAAAGCACCTTTTACCATTTCAAAGTCATCCTAAGAAATAGTAAATTCATTAGAAGTTAGAGAACCAAAAGTTAACCTATATTGGCTAGTTAGGAAAGAGGGTTACTTTTTTTCATATCCATGAATGTCTAGACCAGCTTACGCGTACCTCGACTAATCTCACGGGGGTAACAAAGATGGGTACACTTTTGACTTACGAGGATTAAAAGAAAGAACAAAAGAAATAGGGATGTTTTAGTTTCCTCAATAATCAAAACTTTGAAGAATACTTAAAAATGAGCATTGCACCATATGCCTTATAGTTCATGAGATCTACCTCCCATTTTGCAGGTTGAAGATGATAAAATAATTATACCCCGTAATTCATTGGTTGAAGTAAATCAGTTTGGTCTTCTTATGGGGACAAGGATCCTATTCCAGTGCCTTCAGCAGGACCACTTGACTCGGAATGTATTAAAGAAGGTTTAATATTATGTGATAAGCAGAAAATGAAGGGACATCAAGGGGTAAGTTTGGATGCATTAGTTGGAGTATTCGCTCGGCTTGGACGTGAAGCGGAGGAAATAGGGCTTACCGATACGTCTTCATTTGCCCAACGAGTTTCTTTGGCTATTGAAGAAGCAAAGCCTTTGCTTCGAAAGGTGTGACTCCTTATGATTTCATGCTTTAAATTTTATTTTCTAGCTTGGTTTCTGGGGAAATAGTTATTCAAGTTATGAATGTTTATATCTTGTAAATATTGTAAAAATATATTGAAAAAAATACTTTTTTAGTCCCCGAGTTTTCAAGAATAAGTGCAATTGGTCCCTAAGTATTTAAATTGGTCATTTTAGTCTCCAAGTTTTAAAAAATAAGTTTAAATGGTCCCTAACCTCATATTTCTCATATACTACTATTTTCTTTTATTACTTTATTATGAATTGGTTCCTTTACCAAAAAAAATTATTATGAATTGGCATTTTAAAATAAAAATGAAAATTCTCTCTCATCTCCAATCCTTCCTCTCTCCCTCTCTACTCCCTCCACCTTCCCTATTCATCTTCCTTTCCCTCTTCTCTTCACAAGACAAGATTCATAAAACTGGAGAATGGAATTTTCTTTTTTTGGGAAGAGACAATGAGCAAAACTCGAACTGAAAAGGGGGAAGTAGGGCGACGGTGGCTCCAATGGCAGCAGACCTTCGATTGCTTGAACTGAACTACCCCTTGCTGGAACAGCCATAATCGTCAACACGGTTTTGAAGTTTACAGACCCATCAATTTAGACCCAAAAATGCCGCAAATCAAATGGTGGATAATGTGGATTGAAAACCCAAGTTCGAAACTATAATTTTCAGTTTTTGAAGAAACAGAAAAATAAATATAGAAATGGTCTTATTTTGCTGATCTTATGCTGATAGAGTAATACAAGATTCAAGTCACAAAGGCCAAATGACGATGCCCTTCACTTAACTTTTGGATTTAGACCCAAATTCAATTGAATTGTATCTATTGTTTCTCCATTGTCCAGTTTTATGAATTTTGTTCGTGTGAAGAGAATGGGGAGAGGAAGATGAAGATGGAGAGGGAAGGTGGAGAGAGGAAGGGATGAGAGATGAGAGAGAATTTTTATTTTTATTTAAAAATGTCAACTCATAATAAAGTAATAAAAGAAAATAGTAGTAAATGAGAAATATGAGGTTAGAGACCATTTAAACCTATTTTTCAAAACTTGGGGACTAAAATGACCAATTTAAAAACTTAGGGACCAATTGCACCTATTTCTGAAAACTCGGAGACTAAAAAGGTATTTTTTCCAAATATATTTTGTTGGTTGCTTGATGAGATGTTTACAGATTTTGTTAAGAGGATGGAAAGCTTATCAAAAACAATTATGAGTAAGGACTCGGAACTCGGAAGTATTCGTAAGTCAGCAATTCCATGGAATCTGATAACTTGTTAGGCTTGGCTTCCAGGATTGTAGCTCAAAAAAGTCTTAAAGAGCAAATATGATTAAAACATTTATAGTTCTTACATAAATGAGGGAGTTGCTTTGCAGCTAGAAAACGGGTGTTTGCTTTGGGTATTCTATGCCTTTGAACGAAACCAAGAATTTTTGTATTAAAATGTATTAGGTTCTTGTTTGACTGTCTATTTTGGTGTGTTAGATATATAGTCCCACGGATTTAACTATCTTCTCATGGAAATTGTTTTTGTTTGATTTAGGGGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTTGCTGAGTTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAAGTTAATTAGAAGTCTTTCATATGCCACGGAAGATTTAAGGTAAACTACTCCTGAAGTCTGATATTGAAATTTTTAATTTAGATAAACTCTGATTTCTGAATGGCCACAAATCTTTTAATAAAGCACCCCTGTTGAGGAAATGAAAAGGTACTATAATTTTCAGTCCTAATTTGACAATTTTCACCTGAGACTAGTCTAGAAAGATACCAGGACTTGGAGAAACCCTGCTCTTTTTCTTCAACGATTCGTATATGCCTCTCCATCCGTATCTTCAAGAGAACAGCCTAATTAACGTTCTCGTCAAACAACAATCCACCAGAAATGTTGAGTGATTTTCCATTTAGCATTTTTATGAAAATACTTTGTGAATTTGAAAACACTTTAGCAATTTTTAATGATTATCAGTGCTGAAATAACAATGACAGAAAAAATATCCTTATCCTCTATGCTTGTTTTACAGACAAGCTGGGAGAAAAAGGGACTGTAGGGAATTTGAGGATTTTCTCCGTGTTTATTTTTACCGAGTGCCAATGATATGAAGCTCTTTTGATATAAGAACTCCTAATCCTTAATCACTAAAACCCCCAAGTCGATTCGATTTAAATCCTAAAGATTGTGTTAGACACATATTGTCTTAAGATCAAAGCTCTTGAGACAAAAAAACAAGTTTCTTGGCCCAAGATTTGAACACTTCACAAGATAGGATGATCAATCACTCTTGAATGTTCTAGGCATGCAATTGAACACGTGAATTACAAATTCAAGAAGCTCTCCTAGCTAATCTTGAAAGAAAAAACTCAAAGGCTAAATTCAATTCATCGTAAAAACTTATTAAACAACCTAAAGGCAAAGCTTTAATAGCCTCCCAATGAAAACCTAATGCATTAGAGTAATTGACAAAAATACCCCTACTTAATATCTCATAAAATTGGAAAATAATAAAATTGCATCAAAATTATTAAATAAAATATAAATAATAATGTGATGCCTTAGACGGTTCATATCAACCAATATCTACGGAAGAACTTTAACCTTGTGCATTTTTTAATTTCCAAATAGCTGAAATAAGAAGATTCTCCGAGGTATAACAGCGAGGAAATTGTGAATAGAGCTTTACCTTAACTTTTCTGCCATATCCAACTTTCAAATTGGTGTCTTCTTATTATGCAACTTACCTACAATTTAAGAAGCATAGATACGGATATGAGACACGAATACGATACGACACGCCATATTTTAAAAATCTGGACACGAAATAGCAAGGACAGATTTATTAAAATATACATTTTAAAAAATATATATAACTTTTATACCAAAAGAAAATTCAAAGTAAATGGGTTGATGCATTATATACTTAAAAAACTTAGCTTTACGTATTTCACACTCAAAAGTTATTATTATTATCATATATATGTCTTTTCAGTGTTACTCAACAAGTGTTCTATGCATGTCTAACACATTTGTTGCACTATAAGTGTCTAATACGTGTCCAACAAGTGTCGGAGTGTCCAAGTGTCCGGCATGTGTTGGACATGAACACGTTAGCCAAACTAAAGTGTCTGTGCTTTTTAGCCTATAATCTAGTCTGTTTCTGGTTTCTTCTTAGTACTGATACATAGCTTGTTTCTTATAAAAAATGAAAAAAAAAAATAATGTCTCGGTTAACTTCTTCCATACCATCAGTCCCAAATGTAAATATATATCGTTAATTATTATGAATTCCTTTTACATGATGTATTCTTACGTTGGTTGAGACTATTTTACAGAAGCATGTACGCATCCGCTATGACCCCGGAAAACACAGAATTGCTCCAGAAGTCCATTTATAGGCTAACTCATACTTTGAAGAATATAAAGGTGAGATCTTAATTGGTGCACTGAAGCATAATAGTCCCCTCCAGGGCTTGAGCACTTGGGTCAAAAACGAACATTTAAGTTTTTTTGTGAGGCGCACAACTAAAAAAATGTAAATAAAATTTTAATATATGATGAATAATAAGATGATAAGTTTAAGAAAATAGAGCTTTCATTCGAGATGGCAAGAATATTCATACATCTCTTAAAAATTAGAAAAATTTTGAAGAAGAAAGAAGGAAATCAGGCTTGAGGCGCGCACCTCAAGCAAACTTTATTAAGGGAGCTTCGCTTCTTTGAAACACTGATCTTTATAACTACTTTATCTTTGTAATTCCCTCTTTGGTTTATCCTTCCTATCTCATTTTTTCAGAGTTTGAGCTTCGAAATTCTCGGACTCACCGGTGATGAGGCTACAAAACGGAATTAAAAACTGCTGATCAAGTCTCGGAGCGGGCGCAGGCTACTATGAGACACAGATGGGATGGAAATGAGATTGTATGAACTCGGTATTAGGCGATGATTTATTTTCAACCCTTTCATATTGCATGTGCAAAGCCGATGTGGCTAGACATATTTTCACAACTGTTTTCTGGTTTTGGCTTCTGTGGGGAAGGAGGGAGTCAGGCATTTGGCAAAAAAATTGTCAAAAATTATATCCATAGTTCATGTTAGCATAGAGATATTTGTGAA

mRNA sequence

ATGGTGGGAGATATTCATGTGCAGGTTGTAACATGTTCTGTGTCGTTACCCTCGTCCTTGGTTACCCTTCCACATAGATCTTCAAATAGGTTGTCTTATCATCTCCCATTGGGTCTGAAATCACAAGTAAAGAAGATAAAGGCTACATCTGATGATGCTGGACATAGTCAGCCCCCTTCATCTTCAGAAAGAAGGAATCCACTTTCCCTTATTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTGATTTTGGGTTCGGTCGAAGGAGCATATGGGAAGGTGGGGCCGTTGGGTTGTTCCTAGTGTCAGCTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCAAAATTTAGAAAATACTTGGCTGTCTTCAAGTTTGCTCATGCTAGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGAGTTACTGTTGGCAATGTCATTCGTGTTAACCCTTCCGTGAGATGTATTGAAACTATTGTTGAGACCAGCTTACGCGTACCTCGACTAATCTCACGGGGTAAATCAGTTTGGTCTTCTTATGGGGACAAGGATCCTATTCCAGTGCCTTCAGCAGGACCACTTGACTCGGAATGTATTAAAGAAGGTTTAATATTATGTGATAAGCAGAAAATGAAGGGACATCAAGGGGTAAGTTTGGATGCATTAGTTGGAGTATTCGCTCGGCTTGGACGTGAAGCGGAGGAAATAGGGCTTACCGATACGTCTTCATTTGCCCAACGAGTTTCTTTGGCTATTGAAGAAGCAAAGCCTTTGCTTCGAAAGGGGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTTGCTGAGTTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAAGTTAATTAGAAGTCTTTCATATGCCACGGAAGATTTAAGAAGCATGTACGCATCCGCTATGACCCCGGAAAACACAGAATTGCTCCAGAAGTCCATTTATAGGCTAACTCATACTTTGAAGAATATAAAGAGTTTGAGCTTCGAAATTCTCGGACTCACCGGTGATGAGGCTACAAAACGGAATTAAAAACTGCTGATCAAGTCTCGGAGCGGGCGCAGGCTACTATGAGACACAGATGGGATGGAAATGAGATTGTATGAACTCGGTATTAGGCGATGATTTATTTTCAACCCTTTCATATTGCATGTGCAAAGCCGATGTGGCTAGACATATTTTCACAACTGTTTTCTGGTTTTGGCTTCTGTGGGGAAGGAGGGAGTCAGGCATTTGGCAAAAAAATTGTCAAAAATTATATCCATAGTTCATGTTAGCATAGAGATATTTGTGAA

Coding sequence (CDS)

ATGGTGGGAGATATTCATGTGCAGGTTGTAACATGTTCTGTGTCGTTACCCTCGTCCTTGGTTACCCTTCCACATAGATCTTCAAATAGGTTGTCTTATCATCTCCCATTGGGTCTGAAATCACAAGTAAAGAAGATAAAGGCTACATCTGATGATGCTGGACATAGTCAGCCCCCTTCATCTTCAGAAAGAAGGAATCCACTTTCCCTTATTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTGATTTTGGGTTCGGTCGAAGGAGCATATGGGAAGGTGGGGCCGTTGGGTTGTTCCTAGTGTCAGCTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCAAAATTTAGAAAATACTTGGCTGTCTTCAAGTTTGCTCATGCTAGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGAGTTACTGTTGGCAATGTCATTCGTGTTAACCCTTCCGTGAGATGTATTGAAACTATTGTTGAGACCAGCTTACGCGTACCTCGACTAATCTCACGGGGTAAATCAGTTTGGTCTTCTTATGGGGACAAGGATCCTATTCCAGTGCCTTCAGCAGGACCACTTGACTCGGAATGTATTAAAGAAGGTTTAATATTATGTGATAAGCAGAAAATGAAGGGACATCAAGGGGTAAGTTTGGATGCATTAGTTGGAGTATTCGCTCGGCTTGGACGTGAAGCGGAGGAAATAGGGCTTACCGATACGTCTTCATTTGCCCAACGAGTTTCTTTGGCTATTGAAGAAGCAAAGCCTTTGCTTCGAAAGGGGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTTGCTGAGTTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAAGTTAATTAGAAGTCTTTCATATGCCACGGAAGATTTAAGAAGCATGTACGCATCCGCTATGACCCCGGAAAACACAGAATTGCTCCAGAAGTCCATTTATAGGCTAACTCATACTTTGAAGAATATAAAGAGTTTGAGCTTCGAAATTCTCGGACTCACCGGTGATGAGGCTACAAAACGGAATTAA

Protein sequence

MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPSSSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVETSLRVPRLISRGKSVWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFEILGLTGDEATKRN

Homology

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BLAST of Lsi11G013000 vs. Swiss-Prot
Match: TGD2_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic OS=Arabidopsis thaliana GN=TGD2 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.2e-108
Identity = 217/373 (58.18%), Postives = 274/373 (73.46%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           M+G+  +QV + S+   SS++  P  S N + Y  P      +    A++ DA H QP S
Sbjct: 1   MIGNPVIQVPS-SLMPSSSMIACPRVSPNGVPYLPPKPRTRHLVVRAASNSDAAHGQP-S 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           S   +NPL+++LDVPR +WRQTL+PLSDFGFG+RSIWEGG VGLF+VS A LL LS AWL
Sbjct: 61  SDGGKNPLTVVLDVPRNIWRQTLKPLSDFGFGKRSIWEGG-VGLFIVSGATLLALSWAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVETS--- 180
           RGFQ+RSKFRKY  VF+ +HASGI TGTPVRIRGVTVG +IRVNPS++ IE + E     
Sbjct: 121 RGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDK 180

Query: 181 LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           + +PR  L+   +S            ++PIP PS GPL  EC KEGLI+CD+Q +KG QG
Sbjct: 181 IIIPRNSLVEVNQSGLLMETMIDIMPRNPIPEPSVGPLHPECGKEGLIVCDRQTIKGVQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLD LVG+F R+GRE E IG+ +T S A+R +  IEEA+PLL+K IQAMAED QPLL+E
Sbjct: 241 VSLDELVGIFTRIGREVEAIGVANTYSLAERAASVIEEARPLLKK-IQAMAEDAQPLLSE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
           FRDSGLLKEVE L RSL+ A++DLR + +S MTPENTEL+QKSIY L +TLKN++S+S +
Sbjct: 301 FRDSGLLKEVECLTRSLTQASDDLRKVNSSIMTPENTELIQKSIYTLVYTLKNVESISSD 360

Query: 361 ILGLTGDEATKRN 364
           ILG TGDEAT++N
Sbjct: 361 ILGFTGDEATRKN 369

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BLAST of Lsi11G013000 vs. Swiss-Prot
Match: YCF22_PYRYE (Uncharacterized protein ycf22 OS=Pyropia yezoensis GN=ycf22 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.4e-06
Identity = 46/162 (28.40%), Postives = 76/162 (46.91%), Query Frame = 1


Query: 102 VGLFLVSAAILLTLSLAWLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVI 161
           +G   + +  LL++SL W        K   Y A  +F  A GI  GT VR+RG+ VG V+
Sbjct: 13  LGACFLGSVTLLSISL-W-NIINQAGKNHSYKAFIEFDSAYGIQEGTAVRLRGLPVGKVV 72

Query: 162 RVNPSVRCIETIVE---TSLRVPR--LISRGKSVWSSYGDKDPIPVP---------SAGP 221
            ++ S   I T +E   +S  +P+  LI   ++   +    D IP+           AGP
Sbjct: 73  GISQSSNSILTSIEIKSSSTIIPKTSLIETNQTGLLNDTVIDIIPLSKLSIDYSSIKAGP 132

Query: 222 LDSECIKEGLILCDKQKMKGHQGVSLDALVGVFARLGREAEE 250
           L   C     I+C+   +KG +G++ D L+    R+ +  ++
Sbjct: 133 LSGAC-DNSQIICNLNYLKGERGLNYDDLIRATTRISQRFDD 171

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BLAST of Lsi11G013000 vs. TrEMBL
Match: A0A0A0K2X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027260 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 4.2e-154
Identity = 300/375 (80.00%), Postives = 326/375 (86.93%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSY--HLPLGLKSQVKKIKATSDDAGHSQP 60
           MVGDI VQVVTCSV+LPSSLVTLPHRSS+RLSY  HLPLGLKS+VK+IKATS DAGHSQP
Sbjct: 1   MVGDIRVQVVTCSVTLPSSLVTLPHRSSSRLSYSYHLPLGLKSKVKQIKATSADAGHSQP 60

Query: 61  PSSSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLA 120
           PSSSERRNPLSL LDVPRTVWRQTLRPLS+FGFG+RSIWEGG VGLFLVS AILLTLSLA
Sbjct: 61  PSSSERRNPLSLFLDVPRTVWRQTLRPLSNFGFGQRSIWEGG-VGLFLVSGAILLTLSLA 120

Query: 121 WLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVETS- 180
           WLRGFQLRSKFRKYLAVF+FA ASGIS GTPVRIRGVTVGNVIRVNPS+RCIET+VE   
Sbjct: 121 WLRGFQLRSKFRKYLAVFEFAQASGISVGTPVRIRGVTVGNVIRVNPSLRCIETVVEVED 180

Query: 181 --LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGH 240
             + +PR  L+   +S            +DPIPVPSAGPLD ECI+EGLILCDKQK+KG+
Sbjct: 181 DKIIIPRNSLVEVNQSGLLMETMIDITPRDPIPVPSAGPLDPECIQEGLILCDKQKIKGY 240

Query: 241 QGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLL 300
           QGVSLDALVG+F RLGREAEEIGLT+T   AQRV+L IEEAKPLL K IQAMAEDVQPLL
Sbjct: 241 QGVSLDALVGIFTRLGREAEEIGLTNTFLLAQRVALVIEEAKPLLLK-IQAMAEDVQPLL 300

Query: 301 AEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLS 360
           AE RDSGLLKEVE L RSLS+ATEDLRS+ AS +TPENTELLQKSIY L HTLKN++SLS
Sbjct: 301 AEVRDSGLLKEVESLTRSLSHATEDLRSVQASILTPENTELLQKSIYTLIHTLKNVESLS 360

Query: 361 FEILGLTGDEATKRN 364
            E+LG TGDEATKRN
Sbjct: 361 SEVLGFTGDEATKRN 373

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BLAST of Lsi11G013000 vs. TrEMBL
Match: A0A097P9U1_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI15 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.2e-120
Identity = 239/376 (63.56%), Postives = 292/376 (77.66%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVG+    V TC V+L SSL+ +P  SS+ L   LPL  + ++ +++A S DAGH Q  S
Sbjct: 1   MVGNSLAPVSTCPVALSSSLIIVPPGSSSFLP-RLPLRQRKRLMRVRAMSADAGHGQAAS 60

Query: 61  SS---ERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSL 120
           SS   E++NPL+++L+VP+++WRQTL+PLSDFGFGRRSIWEGG VGLFLVS A+LL LSL
Sbjct: 61  SSSSSEKKNPLAVVLEVPQSIWRQTLKPLSDFGFGRRSIWEGG-VGLFLVSGAVLLALSL 120

Query: 121 AWLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET- 180
           AWLRGFQLRSKFRKY+AVF+FA A GI TGTPVRIRGVTVGNVI+VNPS+R IE +VE  
Sbjct: 121 AWLRGFQLRSKFRKYVAVFEFAQACGICTGTPVRIRGVTVGNVIQVNPSLRSIEAVVEVE 180

Query: 181 --SLRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKG 240
              + +PR  LI   +S            KDPIP PS GPLD EC+KEGLI+CD+QK+KG
Sbjct: 181 DDKIIIPRNSLIEVNQSGLLMETLIDITPKDPIPSPSVGPLDGECVKEGLIVCDRQKIKG 240

Query: 241 HQGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPL 300
           HQGVSLDALVG+F RLGRE EEIG++ + S A+RV+  IEEAKPLL K IQ MAEDVQPL
Sbjct: 241 HQGVSLDALVGIFTRLGREMEEIGVSKSYSLAERVAAVIEEAKPLLTK-IQEMAEDVQPL 300

Query: 301 LAEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSL 360
           L+E RD GLLKEVE L RSL+ A+EDLR  + S MTPENTEL+QKS+Y L  TLKN++++
Sbjct: 301 LSEVRDKGLLKEVENLTRSLTQASEDLRKAHTSIMTPENTELIQKSVYSLIFTLKNLENI 360

Query: 361 SFEILGLTGDEATKRN 364
           S +ILG TGDEAT++N
Sbjct: 361 SSDILGFTGDEATRKN 373

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BLAST of Lsi11G013000 vs. TrEMBL
Match: A0A067KMV3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08303 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119
Identity = 243/375 (64.80%), Postives = 290/375 (77.33%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVS-LPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPP 60
           MVG+   QV  CS + L SSL+ +P+ SS+ L Y LP   K QV+ ++A S DAG SQ  
Sbjct: 1   MVGNSLAQVSKCSATMLSSSLIVVPNGSSSFLPY-LPSRQKKQVRLVRAMSADAGPSQAS 60

Query: 61  SSS-ERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLA 120
           SSS E++NPL+++L+VP+ VWRQTL+PLSDFGFGRRSIWEGG VGLFLVS A+L  LSLA
Sbjct: 61  SSSSEKKNPLAVVLEVPQNVWRQTLKPLSDFGFGRRSIWEGG-VGLFLVSGAVLFALSLA 120

Query: 121 WLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET-- 180
           WLRGFQLRSKFRKYLAVF+FA A GI TGTPVRIRGVTVGNVI+VNPS+RCIE +VE   
Sbjct: 121 WLRGFQLRSKFRKYLAVFEFAQAGGICTGTPVRIRGVTVGNVIKVNPSLRCIEAVVEVED 180

Query: 181 -SLRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGH 240
             + +PR  LI   +S            KDPIP PS GPLD+ECIKEGLI+CD+QK+KG 
Sbjct: 181 DKIIIPRNSLIELNQSGLLMETIIDITPKDPIPSPSVGPLDAECIKEGLIVCDRQKIKGR 240

Query: 241 QGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLL 300
           QGVSLD LVG+F RLGRE EEIG++   + A+RV+  IE+AKPLL K I+ MAED+QPLL
Sbjct: 241 QGVSLDELVGIFTRLGREMEEIGVSKGYTLAERVAAVIEDAKPLLTK-IEEMAEDIQPLL 300

Query: 301 AEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLS 360
           AE RD GLLKEVE L RSL+ A+EDLR  +AS MTPENTEL+QKSIY L  TLKNI+++S
Sbjct: 301 AEVRDGGLLKEVETLTRSLTQASEDLRRAHASIMTPENTELIQKSIYSLIFTLKNIENIS 360

Query: 361 FEILGLTGDEATKRN 364
            +ILG TGDE T+RN
Sbjct: 361 SDILGFTGDEVTRRN 372

[Close]

BLAST of Lsi11G013000 vs. TrEMBL
Match: V4TWW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020598mg PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-118
Identity = 235/373 (63.00%), Postives = 286/373 (76.68%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVG+  VQV TC   L SS++     SSN L   LP   K++V +I+A S DAGH +PPS
Sbjct: 1   MVGNSLVQVSTCPAVL-SSMIAQSRSSSNFLPC-LPPKPKAKVTRIRALSADAGHDRPPS 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           SSE +NPL+ ++DVPR +WR+TLRPLSDFGFGRRS+WEGG VGLFLVS  +LL LSLAWL
Sbjct: 61  SSEGKNPLTAVMDVPRNIWRRTLRPLSDFGFGRRSVWEGG-VGLFLVSGTVLLALSLAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVE----- 180
           RGFQLRSKFRKYLAVF+F+ A GI TGTPVRIRGVTVGNVIRVNPS++ IE +VE     
Sbjct: 121 RGFQLRSKFRKYLAVFEFSQACGICTGTPVRIRGVTVGNVIRVNPSLKSIEAVVEVEDEK 180

Query: 181 TSLRVPRLISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           T +    L+   +S            +DPIP P+ GPLD EC++EGLI+CD+QKMKGHQG
Sbjct: 181 TVIPQNALVEVNQSGLLMETLIDITPRDPIPTPTVGPLDPECVREGLIMCDRQKMKGHQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLD LVG+  RLGRE E IG+T++   A+RVS  IEEA+PLL K IQAMAEDVQPLLAE
Sbjct: 241 VSLDELVGIVTRLGREMEGIGITNSYLLAERVSSVIEEARPLLTK-IQAMAEDVQPLLAE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
            RDSGLLKEVE L RSL+ A+EDLR +++S MTPEN+E++QKS+Y L  TLKNI+++S +
Sbjct: 301 VRDSGLLKEVESLTRSLTQASEDLRRVHSSVMTPENSEMIQKSVYSLIFTLKNIENISSD 360

Query: 361 ILGLTGDEATKRN 364
           +LG TGDE T+RN
Sbjct: 361 VLGFTGDEVTRRN 369

[Close]

BLAST of Lsi11G013000 vs. TrEMBL
Match: A0A061EK84_THECC (Trigalactosyldiacylglycerol 2 isoform 1 OS=Theobroma cacao GN=TCM_019983 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 9.2e-117
Identity = 227/373 (60.86%), Postives = 291/373 (78.02%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVG+  V++ TC   L S+L T+PH     L Y LP   ++++ K++A S +  ++ P +
Sbjct: 1   MVGNTLVKISTCPSLLSSTLTTIPHSFLKTLPY-LPPKPRTRLAKVRAMSANTENTPPTA 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           SSE++NPL+++LDVP+ +WRQTLRPLSDFGFGRRSIWEGG VGLFLVS  +LL LSLAWL
Sbjct: 61  SSEQKNPLAVVLDVPQNIWRQTLRPLSDFGFGRRSIWEGG-VGLFLVSGTVLLALSLAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET---S 180
           RGFQ+RSKFRKYLAVF+FA ASGI TGTPVRIRGVTVGNV+RVNPS++ IE +VE     
Sbjct: 121 RGFQIRSKFRKYLAVFEFAQASGICTGTPVRIRGVTVGNVVRVNPSLKSIEAVVEVEDDK 180

Query: 181 LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           + +PR  LI   +S            +DPIP PS GPL+ +C+KEGLI+CD+QK+KG QG
Sbjct: 181 IFIPRNSLIEVNQSGLLMETLIDITPRDPIPSPSVGPLNPDCLKEGLIVCDRQKIKGEQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLDALVG+  RL R+ EEIG+ +T S A+RV+  I++AKPLL K I+AMAEDVQPLL+E
Sbjct: 241 VSLDALVGIVTRLARQMEEIGIINTYSLAERVAAVIQDAKPLLTK-IEAMAEDVQPLLSE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
           FRDSGLLKE+E L RSL+ A+EDLR +++S +TPENTEL+QKSIY L  TLKNI+++S +
Sbjct: 301 FRDSGLLKEIENLTRSLTQASEDLRKVHSSIITPENTELIQKSIYTLIFTLKNIENISSD 360

Query: 361 ILGLTGDEATKRN 364
           ILG TGDE+T++N
Sbjct: 361 ILGFTGDESTRKN 370

[Close]

BLAST of Lsi11G013000 vs. TAIR10
Match: AT3G20320.1 (AT3G20320.1 trigalactosyldiacylglycerol2)

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-109
Identity = 217/373 (58.18%), Postives = 274/373 (73.46%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           M+G+  +QV + S+   SS++  P  S N + Y  P      +    A++ DA H QP S
Sbjct: 1   MIGNPVIQVPS-SLMPSSSMIACPRVSPNGVPYLPPKPRTRHLVVRAASNSDAAHGQP-S 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           S   +NPL+++LDVPR +WRQTL+PLSDFGFG+RSIWEGG VGLF+VS A LL LS AWL
Sbjct: 61  SDGGKNPLTVVLDVPRNIWRQTLKPLSDFGFGKRSIWEGG-VGLFIVSGATLLALSWAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVETS--- 180
           RGFQ+RSKFRKY  VF+ +HASGI TGTPVRIRGVTVG +IRVNPS++ IE + E     
Sbjct: 121 RGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDK 180

Query: 181 LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           + +PR  L+   +S            ++PIP PS GPL  EC KEGLI+CD+Q +KG QG
Sbjct: 181 IIIPRNSLVEVNQSGLLMETMIDIMPRNPIPEPSVGPLHPECGKEGLIVCDRQTIKGVQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLD LVG+F R+GRE E IG+ +T S A+R +  IEEA+PLL+K IQAMAED QPLL+E
Sbjct: 241 VSLDELVGIFTRIGREVEAIGVANTYSLAERAASVIEEARPLLKK-IQAMAEDAQPLLSE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
           FRDSGLLKEVE L RSL+ A++DLR + +S MTPENTEL+QKSIY L +TLKN++S+S +
Sbjct: 301 FRDSGLLKEVECLTRSLTQASDDLRKVNSSIMTPENTELIQKSIYTLVYTLKNVESISSD 360

Query: 361 ILGLTGDEATKRN 364
           ILG TGDEAT++N
Sbjct: 361 ILGFTGDEATRKN 369

[Close]

BLAST of Lsi11G013000 vs. NCBI nr
Match: gi|659100662|ref|XP_008451206.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Cucumis melo])

HSP 1 Score: 562.0 bits (1447), Expect = 7.6e-157
Identity = 303/373 (81.23%), Postives = 325/373 (87.13%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVGDI VQVVTCSV+LPSSLVTLPHRSSNRLSYHLPLG KS+VK+IKATS DAGHSQPPS
Sbjct: 1   MVGDIRVQVVTCSVTLPSSLVTLPHRSSNRLSYHLPLGRKSKVKQIKATSADAGHSQPPS 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           SSERRNPLSL LDVPRTVWRQTLRPLS+FGFGRRSIWEGG VGLFLVS AILLTLSLAWL
Sbjct: 61  SSERRNPLSLFLDVPRTVWRQTLRPLSNFGFGRRSIWEGG-VGLFLVSGAILLTLSLAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET---S 180
           RGFQLRSKFRKYLAVF+FA ASGIS GTPVRIRGVTVGNVIRVNPS+RCIET+VE     
Sbjct: 121 RGFQLRSKFRKYLAVFEFAQASGISVGTPVRIRGVTVGNVIRVNPSLRCIETVVEVEDDK 180

Query: 181 LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           + +PR  L+   +S            +DPIPVPSAGPLD ECI+EGLILCDKQKMKGHQG
Sbjct: 181 IIIPRNSLVEVNQSGLLMETMIDITPRDPIPVPSAGPLDLECIQEGLILCDKQKMKGHQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLDALVG+F RLGREAEEIGLT+T   AQRV+L IEEAKPLL K IQAMAEDVQPLLAE
Sbjct: 241 VSLDALVGIFTRLGREAEEIGLTNTFLLAQRVALVIEEAKPLLLK-IQAMAEDVQPLLAE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
            RDSGLLKEVE L RSLS+ATEDLRS+ AS +TPENTELLQKS+Y L HTLKNI+SLS E
Sbjct: 301 VRDSGLLKEVESLTRSLSHATEDLRSVQASILTPENTELLQKSVYTLIHTLKNIESLSSE 360

Query: 361 ILGLTGDEATKRN 364
           +LG TGDEATKRN
Sbjct: 361 VLGFTGDEATKRN 371

[Close]

BLAST of Lsi11G013000 vs. NCBI nr
Match: gi|778723307|ref|XP_011658639.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 552.4 bits (1422), Expect = 6.0e-154
Identity = 300/375 (80.00%), Postives = 326/375 (86.93%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSY--HLPLGLKSQVKKIKATSDDAGHSQP 60
           MVGDI VQVVTCSV+LPSSLVTLPHRSS+RLSY  HLPLGLKS+VK+IKATS DAGHSQP
Sbjct: 1   MVGDIRVQVVTCSVTLPSSLVTLPHRSSSRLSYSYHLPLGLKSKVKQIKATSADAGHSQP 60

Query: 61  PSSSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLA 120
           PSSSERRNPLSL LDVPRTVWRQTLRPLS+FGFG+RSIWEGG VGLFLVS AILLTLSLA
Sbjct: 61  PSSSERRNPLSLFLDVPRTVWRQTLRPLSNFGFGQRSIWEGG-VGLFLVSGAILLTLSLA 120

Query: 121 WLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVETS- 180
           WLRGFQLRSKFRKYLAVF+FA ASGIS GTPVRIRGVTVGNVIRVNPS+RCIET+VE   
Sbjct: 121 WLRGFQLRSKFRKYLAVFEFAQASGISVGTPVRIRGVTVGNVIRVNPSLRCIETVVEVED 180

Query: 181 --LRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGH 240
             + +PR  L+   +S            +DPIPVPSAGPLD ECI+EGLILCDKQK+KG+
Sbjct: 181 DKIIIPRNSLVEVNQSGLLMETMIDITPRDPIPVPSAGPLDPECIQEGLILCDKQKIKGY 240

Query: 241 QGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLL 300
           QGVSLDALVG+F RLGREAEEIGLT+T   AQRV+L IEEAKPLL K IQAMAEDVQPLL
Sbjct: 241 QGVSLDALVGIFTRLGREAEEIGLTNTFLLAQRVALVIEEAKPLLLK-IQAMAEDVQPLL 300

Query: 301 AEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLS 360
           AE RDSGLLKEVE L RSLS+ATEDLRS+ AS +TPENTELLQKSIY L HTLKN++SLS
Sbjct: 301 AEVRDSGLLKEVESLTRSLSHATEDLRSVQASILTPENTELLQKSIYTLIHTLKNVESLS 360

Query: 361 FEILGLTGDEATKRN 364
            E+LG TGDEATKRN
Sbjct: 361 SEVLGFTGDEATKRN 373

[Close]

BLAST of Lsi11G013000 vs. NCBI nr
Match: gi|699262842|gb|AIU41663.1| (ABC transporter family protein [Hevea brasiliensis])

HSP 1 Score: 439.1 bits (1128), Expect = 7.4e-120
Identity = 239/376 (63.56%), Postives = 292/376 (77.66%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVG+    V TC V+L SSL+ +P  SS+ L   LPL  + ++ +++A S DAGH Q  S
Sbjct: 1   MVGNSLAPVSTCPVALSSSLIIVPPGSSSFLP-RLPLRQRKRLMRVRAMSADAGHGQAAS 60

Query: 61  SS---ERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSL 120
           SS   E++NPL+++L+VP+++WRQTL+PLSDFGFGRRSIWEGG VGLFLVS A+LL LSL
Sbjct: 61  SSSSSEKKNPLAVVLEVPQSIWRQTLKPLSDFGFGRRSIWEGG-VGLFLVSGAVLLALSL 120

Query: 121 AWLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET- 180
           AWLRGFQLRSKFRKY+AVF+FA A GI TGTPVRIRGVTVGNVI+VNPS+R IE +VE  
Sbjct: 121 AWLRGFQLRSKFRKYVAVFEFAQACGICTGTPVRIRGVTVGNVIQVNPSLRSIEAVVEVE 180

Query: 181 --SLRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKG 240
              + +PR  LI   +S            KDPIP PS GPLD EC+KEGLI+CD+QK+KG
Sbjct: 181 DDKIIIPRNSLIEVNQSGLLMETLIDITPKDPIPSPSVGPLDGECVKEGLIVCDRQKIKG 240

Query: 241 HQGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPL 300
           HQGVSLDALVG+F RLGRE EEIG++ + S A+RV+  IEEAKPLL K IQ MAEDVQPL
Sbjct: 241 HQGVSLDALVGIFTRLGREMEEIGVSKSYSLAERVAAVIEEAKPLLTK-IQEMAEDVQPL 300

Query: 301 LAEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSL 360
           L+E RD GLLKEVE L RSL+ A+EDLR  + S MTPENTEL+QKS+Y L  TLKN++++
Sbjct: 301 LSEVRDKGLLKEVENLTRSLTQASEDLRKAHTSIMTPENTELIQKSVYSLIFTLKNLENI 360

Query: 361 SFEILGLTGDEATKRN 364
           S +ILG TGDEAT++N
Sbjct: 361 SSDILGFTGDEATRKN 373

[Close]

BLAST of Lsi11G013000 vs. NCBI nr
Match: gi|802600329|ref|XP_012072888.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Jatropha curcas])

HSP 1 Score: 436.8 bits (1122), Expect = 3.7e-119
Identity = 243/375 (64.80%), Postives = 290/375 (77.33%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVS-LPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPP 60
           MVG+   QV  CS + L SSL+ +P+ SS+ L Y LP   K QV+ ++A S DAG SQ  
Sbjct: 1   MVGNSLAQVSKCSATMLSSSLIVVPNGSSSFLPY-LPSRQKKQVRLVRAMSADAGPSQAS 60

Query: 61  SSS-ERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLA 120
           SSS E++NPL+++L+VP+ VWRQTL+PLSDFGFGRRSIWEGG VGLFLVS A+L  LSLA
Sbjct: 61  SSSSEKKNPLAVVLEVPQNVWRQTLKPLSDFGFGRRSIWEGG-VGLFLVSGAVLFALSLA 120

Query: 121 WLRGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVET-- 180
           WLRGFQLRSKFRKYLAVF+FA A GI TGTPVRIRGVTVGNVI+VNPS+RCIE +VE   
Sbjct: 121 WLRGFQLRSKFRKYLAVFEFAQAGGICTGTPVRIRGVTVGNVIKVNPSLRCIEAVVEVED 180

Query: 181 -SLRVPR--LISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGH 240
             + +PR  LI   +S            KDPIP PS GPLD+ECIKEGLI+CD+QK+KG 
Sbjct: 181 DKIIIPRNSLIELNQSGLLMETIIDITPKDPIPSPSVGPLDAECIKEGLIVCDRQKIKGR 240

Query: 241 QGVSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLL 300
           QGVSLD LVG+F RLGRE EEIG++   + A+RV+  IE+AKPLL K I+ MAED+QPLL
Sbjct: 241 QGVSLDELVGIFTRLGREMEEIGVSKGYTLAERVAAVIEDAKPLLTK-IEEMAEDIQPLL 300

Query: 301 AEFRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLS 360
           AE RD GLLKEVE L RSL+ A+EDLR  +AS MTPENTEL+QKSIY L  TLKNI+++S
Sbjct: 301 AEVRDGGLLKEVETLTRSLTQASEDLRRAHASIMTPENTELIQKSIYSLIFTLKNIENIS 360

Query: 361 FEILGLTGDEATKRN 364
            +ILG TGDE T+RN
Sbjct: 361 SDILGFTGDEVTRRN 372

[Close]

BLAST of Lsi11G013000 vs. NCBI nr
Match: gi|567900962|ref|XP_006442969.1| (hypothetical protein CICLE_v10020598mg [Citrus clementina])

HSP 1 Score: 434.5 bits (1116), Expect = 1.8e-118
Identity = 235/373 (63.00%), Postives = 286/373 (76.68%), Query Frame = 1


Query: 1   MVGDIHVQVVTCSVSLPSSLVTLPHRSSNRLSYHLPLGLKSQVKKIKATSDDAGHSQPPS 60
           MVG+  VQV TC   L SS++     SSN L   LP   K++V +I+A S DAGH +PPS
Sbjct: 1   MVGNSLVQVSTCPAVL-SSMIAQSRSSSNFLPC-LPPKPKAKVTRIRALSADAGHDRPPS 60

Query: 61  SSERRNPLSLILDVPRTVWRQTLRPLSDFGFGRRSIWEGGAVGLFLVSAAILLTLSLAWL 120
           SSE +NPL+ ++DVPR +WR+TLRPLSDFGFGRRS+WEGG VGLFLVS  +LL LSLAWL
Sbjct: 61  SSEGKNPLTAVMDVPRNIWRRTLRPLSDFGFGRRSVWEGG-VGLFLVSGTVLLALSLAWL 120

Query: 121 RGFQLRSKFRKYLAVFKFAHASGISTGTPVRIRGVTVGNVIRVNPSVRCIETIVE----- 180
           RGFQLRSKFRKYLAVF+F+ A GI TGTPVRIRGVTVGNVIRVNPS++ IE +VE     
Sbjct: 121 RGFQLRSKFRKYLAVFEFSQACGICTGTPVRIRGVTVGNVIRVNPSLKSIEAVVEVEDEK 180

Query: 181 TSLRVPRLISRGKS-----VWSSYGDKDPIPVPSAGPLDSECIKEGLILCDKQKMKGHQG 240
           T +    L+   +S            +DPIP P+ GPLD EC++EGLI+CD+QKMKGHQG
Sbjct: 181 TVIPQNALVEVNQSGLLMETLIDITPRDPIPTPTVGPLDPECVREGLIMCDRQKMKGHQG 240

Query: 241 VSLDALVGVFARLGREAEEIGLTDTSSFAQRVSLAIEEAKPLLRKGIQAMAEDVQPLLAE 300
           VSLD LVG+  RLGRE E IG+T++   A+RVS  IEEA+PLL K IQAMAEDVQPLLAE
Sbjct: 241 VSLDELVGIVTRLGREMEGIGITNSYLLAERVSSVIEEARPLLTK-IQAMAEDVQPLLAE 300

Query: 301 FRDSGLLKEVEKLIRSLSYATEDLRSMYASAMTPENTELLQKSIYRLTHTLKNIKSLSFE 360
            RDSGLLKEVE L RSL+ A+EDLR +++S MTPEN+E++QKS+Y L  TLKNI+++S +
Sbjct: 301 VRDSGLLKEVESLTRSLTQASEDLRRVHSSVMTPENSEMIQKSVYSLIFTLKNIENISSD 360

Query: 361 ILGLTGDEATKRN 364
           +LG TGDE T+RN
Sbjct: 361 VLGFTGDEVTRRN 369

The following BLAST results are available for this feature:

BLAST of Lsi11G013000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGD2_ARATH	2.2e-108	58.18	Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic OS=Arabidopsis thaliana GN=...	[more]
YCF22_PYRYE	9.4e-06	28.40	Uncharacterized protein ycf22 OS=Pyropia yezoensis GN=ycf22 PE=4 SV=1	[more]

BLAST of Lsi11G013000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2X5_CUCSA	4.2e-154	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027260 PE=4 SV=1	[more]
A0A097P9U1_HEVBR	5.2e-120	63.56	ABC transporter family protein OS=Hevea brasiliensis GN=ABCI15 PE=2 SV=1	[more]
A0A067KMV3_JATCU	2.6e-119	64.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08303 PE=4 SV=1	[more]
V4TWW7_9ROSI	1.3e-118	63.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020598mg PE=4 SV=1	[more]
A0A061EK84_THECC	9.2e-117	60.86	Trigalactosyldiacylglycerol 2 isoform 1 OS=Theobroma cacao GN=TCM_019983 PE=4 SV...	[more]

BLAST of Lsi11G013000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20320.1	1.3e-109	58.18	trigalactosyldiacylglycerol2	[more]

BLAST of Lsi11G013000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100662\|ref\|XP_008451206.1\|	7.6e-157	81.23	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Cucumis melo]	[more]
gi\|778723307\|ref\|XP_011658639.1\|	6.0e-154	80.00	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Cucumis sativus...	[more]
gi\|699262842\|gb\|AIU41663.1\|	7.4e-120	63.56	ABC transporter family protein [Hevea brasiliensis]	[more]
gi\|802600329\|ref\|XP_012072888.1\|	3.7e-119	64.80	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Jatropha c...	[more]
gi\|567900962\|ref\|XP_006442969.1\|	1.8e-118	63.00	hypothetical protein CICLE_v10020598mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003399	Mce/MlaD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0032365	intracellular lipid transport
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005319	lipid transporter activity
molecular_function	GO:0005543	phospholipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G013000.1	Lsi11G013000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003399	Mce/MlaD	PFAM	PF02470	MlaD	coord: 131..164 score: 2.
None	No IPR available	PANTHER	PTHR34675	FAMILY NOT NAMED	coord: 8..363 score: 1.1E
None	No IPR available	PANTHER	PTHR34675:SF1	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 2, CHLOROPLASTIC	coord: 8..363 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G013000	Csa7G027260	Cucumber (Chinese Long) v2	culsiB494
Lsi11G013000	CSPI07G02170	Wild cucumber (PI 183967)	cpilsiB505
Lsi11G013000	Cucsa.099830	Cucumber (Gy14) v1	cgylsiB122
Lsi11G013000	CmaCh19G008070	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G013000	Cla015732	Watermelon (97103) v1	lsiwmB106
Lsi11G013000	MELO3C015704	Melon (DHL92) v3.5.1	lsimeB098
Lsi11G013000	ClCG02G003310	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G013000	MELO3C015704.2	Melon (DHL92) v3.6.1	lsimedB104
Lsi11G013000	Cla97C02G029860	Watermelon (97103) v2	lsiwmbB086
Lsi11G013000	Cp4.1LG15g06590	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G013000	CsGy7G001900	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G013000	CsaV3_7G002030	Cucumber (Chinese Long) v3	cuclsiB529

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G013000	Wax gourd	lsiwgoB118
Lsi11G013000	Bottle gourd (USVL1VR-Ls)	lsilsiB022
Lsi11G013000	Bottle gourd (USVL1VR-Ls)	lsilsiB054
Lsi11G013000	Cucumber (Gy14) v1	cgylsiB178
Lsi11G013000	Cucurbita maxima (Rimu)	cmalsiB100
Lsi11G013000	Cucurbita maxima (Rimu)	cmalsiB515
Lsi11G013000	Cucurbita maxima (Rimu)	cmalsiB558
Lsi11G013000	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G013000	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G013000	Cucurbita moschata (Rifu)	cmolsiB498
Lsi11G013000	Cucurbita moschata (Rifu)	cmolsiB542
Lsi11G013000	Cucurbita pepo (Zucchini)	cpelsiB232
Lsi11G013000	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G013000	Cucurbita pepo (Zucchini)	cpelsiB607
Lsi11G013000	Wild cucumber (PI 183967)	cpilsiB432
Lsi11G013000	Cucumber (Chinese Long) v2	culsiB428
Lsi11G013000	Melon (DHL92) v3.5.1	lsimeB088
Lsi11G013000	Cucumber (Gy14) v2	cgyblsiB393
Lsi11G013000	Melon (DHL92) v3.6.1	lsimedB094
Lsi11G013000	Silver-seed gourd	carlsiB174
Lsi11G013000	Silver-seed gourd	carlsiB316
Lsi11G013000	Silver-seed gourd	carlsiB779
Lsi11G013000	Silver-seed gourd	carlsiB974
Lsi11G013000	Cucumber (Chinese Long) v3	cuclsiB455