Lsi11G012980 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G012980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr11 : 21614955 .. 21616778 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGATGTCTTTTGGGTAACATTTTTATTTACCTACTAAATATCATGTTTCATAGGTTTATCATCCTACAATTTTAACATTGACCAAAGAAAAATAGTATAACTGAAAATATTAAAATTGAAAATATATTTAAATCTTTTAAAAAATAATAAGATCTTCCTTTTCAGACGTGTGCGAGAATGAAGAAAAACAAAGGCGATTTAATGTCAAACGTCTTTGTCACTGCGAGTTCGAGTTCTTAAGGTTGAGCTTCTAAAAGTTCTAGCCTTATTGGTGAATCTTGAACATGAAATCAAAATCTTATTCTCAAAATAACCATTTTAGAGTTACTCAAGTCGAAAGAACCATCCAGGTTAGTTATAGTTGTCGGTAGCCTCTCTCTTAAATATTTGTTAATCTATACCCAACATTGTTTTTTCATCTCAATTCCTCCTCTAAAATAAGATCATTTGGTTCGTTTGATGGCTCTCATTGTTGAATTTAACAGGTGATTCTAACCTAATGAAACCCATTAGGGGCGATCTGTTTAGCGATATAACAACTATCAAATTTTGATTAATGTTCCTGGTGAAACAATCCATCCAGTGAAACCCCTTCGATTTTTTATTGGTGTCGAGATTGAGAACGCCATAAGTGCTAGATGCAAGAGAGATGACATATGATGTTTCAATTTTTGGAGCTTTTATAGGATTTTTTTTATATACATGATACACAGTAATTCTTCTTCTTCGTTGATTTTTTTGGAGCTTCTGTAGGTTTTTCAATATATATTGTGATACATGTAATTCTTCTTCTTCTTCGATTTTTCAGAATTTTTATAGGATTTTTTTATGTATATAGGGATATATGTAAATTTTTTTCTCCTTCGATTTTTTGGAGCTTTTATAGAATTTTTTTTATATATATTGTGATATATGTAATCATTTATTTGATATAAATAAGGTGTGAAAGACAATTTTTTTTTTATTTAGACTTTATGTTTTATGATATATATATATGTTTTATGTTGAACATTGAGTCAATATGGGGTTTATATATTGTGGTTTAACTGATAAAGGAATTCATATAAACAATATATATTCTTAATTTATATATGATATTGTCGTATCGAAACTTTCGCATGGTACAACCATATGCTTGAATGCATTTCAATTATACTTTCGAATGTAACTAGTGTAGTGCAAAAAAAGATCTTAATACGATATTTTACCATGTATTTTAATTATATAACAAATCTGAGCATGTTTCATATGTTGGTTAGAAGATTTTCAAACACCTAACACAATGTTCTAAATATATTTAAAAATAATTATGAAGATAGAATAGAGAATACTAAACATTGAAAATGGAAGAGAAAATATGAAAAAAAATTACAATAAATTCTTATAAAGACATGCTTACCAATTTAGAATTTTTAGATATAATAACTCTAATTTAATATATTGTCATTAAAATCTCTTTCCAACTTTAAATACTACAAAAAAAAATATGGAAAAAAATCCTAATAAATGGCCAAAAATACACTGCCGGCTAACCTCTGAAGAATGCTTTGGTCTGAAATTTGCAGGTAAATTCTATATATATAAATATTTAATATTTTAGACATTTATGAAAATAAGTTTAGAATCTATATCTCTAAATATCTCCCAAAATTATAACTTTTTGGGCCCAGCAGTCTTAAACGTTAGCTGATTGGGCCAGACAGGTCCAAAACAAAATCTTATTGGGCTAGGCCCAGCCAACGTCATCTGAAAAGACTGCCACGTAGACGCGTTCAGCATGTGGTTTGGCAGACAGAACACAACGACGTCGTTTTATCATAA

mRNA sequence

AATCGATGTCTTTTGGACGTGTGCGAGAATGAAGAAAAACAAAGGCGATTTAATGTCAAACGTCTTTGTCACTGCGAGTTCGAGTTCTTAAGGTCCAAAACAAAATCTTATTGGGCTAGGCCCAGCCAACGTCATCTGAAAAGACTGCCACGTAGACGCGTTCAGCATGTGGTTTGGCAGACAGAACACAACGACGTCGTTTTATCATAA

Coding sequence (CDS)

AATCGATGTCTTTTGGACGTGTGCGAGAATGAAGAAAAACAAAGGCGATTTAATGTCAAACGTCTTTGTCACTGCGAGTTCGAGTTCTTAAGGTCCAAAACAAAATCTTATTGGGCTAGGCCCAGCCAACGTCATCTGAAAAGACTGCCACGTAGACGCGTTCAGCATGTGGTTTGGCAGACAGAACACAACGACGTCGTTTTATCATAA

Protein sequence

NRCLLDVCENEEKQRRFNVKRLCHCEFEFLRSKTKSYWARPSQRHLKRLPRRRVQHVVWQTEHNDVVLS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G012980.1Lsi11G012980.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G012980Bottle gourd (USVL1VR-Ls)lsilsiB022
Lsi11G012980Bottle gourd (USVL1VR-Ls)lsilsiB054
Lsi11G012980Cucumber (Gy14) v1cgylsiB122
Lsi11G012980Cucumber (Gy14) v1cgylsiB178
Lsi11G012980Cucurbita maxima (Rimu)cmalsiB100
Lsi11G012980Cucurbita maxima (Rimu)cmalsiB472
Lsi11G012980Cucurbita maxima (Rimu)cmalsiB515
Lsi11G012980Cucurbita maxima (Rimu)cmalsiB558
Lsi11G012980Cucurbita moschata (Rifu)cmolsiB080
Lsi11G012980Cucurbita moschata (Rifu)cmolsiB457
Lsi11G012980Cucurbita moschata (Rifu)cmolsiB498
Lsi11G012980Cucurbita moschata (Rifu)cmolsiB542
Lsi11G012980Cucurbita pepo (Zucchini)cpelsiB199
Lsi11G012980Cucurbita pepo (Zucchini)cpelsiB232
Lsi11G012980Cucurbita pepo (Zucchini)cpelsiB526
Lsi11G012980Cucurbita pepo (Zucchini)cpelsiB607
Lsi11G012980Wild cucumber (PI 183967)cpilsiB432
Lsi11G012980Cucumber (Chinese Long) v2culsiB428
Lsi11G012980Cucumber (Chinese Long) v2culsiB494
Lsi11G012980Melon (DHL92) v3.5.1lsimeB088
Lsi11G012980Melon (DHL92) v3.5.1lsimeB098
Lsi11G012980Watermelon (Charleston Gray)lsiwcgB097
Lsi11G012980Watermelon (97103) v1lsiwmB106
Lsi11G012980Cucumber (Gy14) v2cgyblsiB393
Lsi11G012980Cucumber (Gy14) v2cgyblsiB462
Lsi11G012980Melon (DHL92) v3.6.1lsimedB094
Lsi11G012980Melon (DHL92) v3.6.1lsimedB104
Lsi11G012980Silver-seed gourdcarlsiB174
Lsi11G012980Silver-seed gourdcarlsiB316
Lsi11G012980Silver-seed gourdcarlsiB779
Lsi11G012980Silver-seed gourdcarlsiB974
Lsi11G012980Cucumber (Chinese Long) v3cuclsiB455
Lsi11G012980Cucumber (Chinese Long) v3cuclsiB529
Lsi11G012980Watermelon (97103) v2lsiwmbB086
Lsi11G012980Wax gourdlsiwgoB118