Lsi11G012570 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTAACCCTAAAGAATTTTCTTAATTAATTAGCAAAATTAATGGCTTGGTTATTTCTTGGTTTTCTCTTTCTCTTTTTAATTTCTTCTACTAATGCTTGTGATCGTTGTGTTTATCAATCTAAAGCTAGCCACCTTTATGATTCACCTACTACATGTAAAAATAAATAAATAATATTTTTAGTTACCTTTCTTTGAATAATAATTGCATTAAGATTTTGTTATAATTAATATGGGTTGGTTTATCTTATCCATTTGGAACAGATGGAGGAGCATGTGGTTATGGCAATATGGCCTTGCAATTCTCTAATGGCTTCTTTGCAGCTGCTGTCCCTTCCCTTTACAGACAAGGAGCTGGTTGTGGCGCTTGCTATCAGGTCATTATTTCCTTTTCTTTTCATTTCTATTTCTTTTTATTTTATTTTTTAGTACGAAAGTGAAAGCGAAAGTGTAAATTGGAGATCGAACCTCCGACTTTAAGGAAAGTTATATAGATTTTTTTATGAAAAGTTGACAACTAATTACTAGCTATAGTGTATATTAAAGGGTAGTATATTAAATTTTCGTCGATATATCGGTATTTTCTTAAGTTCATAGATTCGACATTTACATAAGGGATGAATCGATATTTCTATTATATTGTGAAAAAATCAATGAAACATAATAATAATAATAATAATAATAATAACACCACCATATAACCAAATATAATATAAATAATAAACATTTTAATTTATAGCAAAGTATAAAAGATATTTACAAGTATAGAAATATTTTACTGTCTATCAACGATATACCACGACAGACTATAAATTTTTTCTATATTTGTAAATAGTTTGATATTTTTTATGTTTATAATAATTTCTCAAATATTTATTTAGTAATTTAAATAATTTTTAAAATTCCTTTTCGTTTTTATTAATTTTTCATAAATATTCATCAATATCGACATATTATATCAATATTTTTATCGATATTTTTATAAAATTGAAATCTCAATATTTTCATGGATATCGACATTTCAAACCTTATTATTAATTTTTTTTTTTAGGTGAGATGCAAAAACAGAAGGCTTTGTAACACCGTAGGGGCTAAAGTGGTATTGACAGATCAAAATAACGATAACGTGACAGATCTTGTTCTTAGTAAAAGAGCTTTCTTTACAATGGCTTTAAATGGCAAAGGTGCAGACCTGTTGAATCTTGGAGTTGTTGATGTTGAATATAAGAGGTAG AATTAACCCTAAAGAATTTTCTTAATTAATTAGCAAAATTAATGGCTTGGTTATTTCTTGGTTTTCTCTTTCTCTTTTTAATTTCTTCTACTAATGCTTGTGATCGTTGTGTTTATCAATCTAAAGCTAGCCACCTTTATGATTCACCTACTACATATGGAGGAGCATGTGGTTATGGCAATATGGCCTTGCAATTCTCTAATGGCTTCTTTGCAGCTGCTGTCCCTTCCCTTTACAGACAAGGAGCTGGTTGTGGCGCTTGCTATCAGTAAAAGAGCTTTCTTTACAATGGCTTTAAATGGCAAAGGTGCAGACCTGTTGAATCTTGGAGTTGTTGATGTTGAATATAAGAGGTAG ATGCTTGTGATCGTTGTGTTTATCAATCTAAAGCTAGCCACCTTTATGATTCACCTACTACATATGGAGGAGCATGTGGTTATGGCAATATGGCCTTGCAATTCTCTAATGGCTTCTTTGCAGCTGCTGTCCCTTCCCTTTACAGACAAGGAGCTGGTTGTGGCGCTTGCTATCAGTAAAAGAGCTTTCTTTACAATGGCTTTAAATGGCAAAGGTGCAGACCTGTTGAATCTTGGAGTTGTTGATGTTGAATATAAGAGGTAG MLVIVVFINLKLATFMIHLLHMEEHVVMAIWPCNSLMASLQLLSLPFTDKELVVALAISKRAFFTMALNGKGADLLNLGVVDVEYKR
BLAST of Lsi11G012570 vs. TrEMBL
Match: A0A0A0K2Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019890 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.2e-07 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1
BLAST of Lsi11G012570 vs. TrEMBL
Match: A0A0A0K0R8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019850 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-06 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1
BLAST of Lsi11G012570 vs. NCBI nr
Match: gi|659094116|ref|XP_008447892.1| (PREDICTED: expansin-like A2 [Cucumis melo]) HSP 1 Score: 63.2 bits (152), Expect = 2.7e-07 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 1
BLAST of Lsi11G012570 vs. NCBI nr
Match: gi|700188076|gb|KGN43309.1| (hypothetical protein Csa_7G019890 [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 4.5e-07 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1
BLAST of Lsi11G012570 vs. NCBI nr
Match: gi|778730065|ref|XP_004144934.2| (PREDICTED: expansin-like A2 [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-06 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1
BLAST of Lsi11G012570 vs. NCBI nr
Match: gi|700188072|gb|KGN43305.1| (hypothetical protein Csa_7G019850 [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-06 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 1
BLAST of Lsi11G012570 vs. NCBI nr
Match: gi|659094104|ref|XP_008447886.1| (PREDICTED: expansin-like A1 isoform X1 [Cucumis melo]) HSP 1 Score: 58.2 bits (139), Expect = 8.6e-06 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |