Lsi11G012030 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATATTTAAAAAAGAAAAAAAAAATGGGTATTTCAATTTTCGGTTCCAACTGTCTTACTTGGACTCTATCTTCCAAGTTCCAACTCCACCAACCAGCCTCCTTTCGGGGTCACCTTCGACCCTTCTTCTTCCTCCGTCGCCGCCGCCGCCGCCTGAGTCGACGGCGCACAGACTCTATGGAAAGGCTTCTGTCTTCTCCTTCTCCGACTTCCCTCAAAATTAACCCCAATCCATCTCTTATTCTTCCTCGGTTTCGTCGCATTGACTCCGTGAAGCTCAATTTCCCCCTCCCGACGCGCCATGGACTTAAGCCGCTCGGTTTAATCTCCTGTAAGAATGAGAAGCCTTCTATATCTTTGATTCGTTGTTTTTCTTCGTCGAATTCGTCGACTGATTCGATTTGCCAGTCCGATTCTCGAGCCGGCTCACCTAATCCTGATTTCCTGAAACATTTCGCTGGAAAGGAGAAGGTATTGGATTGAAATTCCTTTTCTGGTGTTAAATTCTGTAATTGGATTGCGTTCGGATTCGCTATACCGTTTTATTCACTACGAAACGTATTATTTTGTTTTTTAGGTAAAGTTTGGAAATACCGTGAATTGTTTGCGTTATAACTCATTCAGTTTGACTTACTTATCGAATTTCAGGTCCTTTTTGTTGAATTTTATGGCATGAATTTCGCCTAATTATACGAGACGTGCGAAATATTTGCTATGGTGCATCGCATAGTTAGATCTTATTGTAGGAATTCCAGTTTATTGTTGGAATCACTGAAAAGAATGACTGATTTGCAAATTCGTAATATTAAATCAGCAATGTCTCTAATGAATTACAATTGCCAGTTATGGTTTCATAAGTGTGCCCTAGCATTGCACTAATCCAAATTTTTGGATCATGTTTCAGTTGCCTTAACCGTCGAGTGAGATTCTTTATTGTGAATTAAATGTTGAAACTGATCCTAATGAAGAACTATGGCTATGTTCAGAGAAATTTCTGTTCCATGTTACATTCCTCTTTTATTGTTGGCACTACTCATGGAGATTAAATATTTTCATTTATGGTCACAGACTCACAAAGAGATACAGAATACAGGACGCAGCAGTGTTTACGATTTTATTTTTTTGTGGCCTTATCTTTTTCTGACTCTTTGTACACCACGAAAATCCCAGCCCTGTTCACATGTTCAAGCATCGCTGACATCTAGGAAGCAATATAATGAAATTAGGGAATGATTTAGTATCTAAATTATTGACTGTAGAGAAACGTACACATTTCTAATTAGTTTATTCACATTTTCCATTTGGAGTTATCCATTTAATCCTAATGCATATCTGTTATCAGTTTATAGGATATAGCAGAATGGATAGCCATAGTTATAGAGAAAACGAGTACTGATATTATGAATAACAAAGACCCTTTTGGCTGTGATACGGGATATCTTTGCTTTGGTCTGTAGTTGTGTATTTTCTTCTTAGAAGTTAAAACTGATAAAATTTCACACGTTGTTAAACTTCATAGGTCAAAAGGTCACTCTTTGTTCTGTCTGCTCTTGCTCTGATCCTGATTCAACCAGTCTTTGCACCAGCAGCTTTTGCATCCTTTCAAAATGCAGCAGCTACAACTGGAGGTCCTGCAGCTGCTGCAGTTGGGCGACGACTGATCCAAAGTGAACTATTAAGTAGTGCTTGGACTGGTTTTTTTGCTGGTTGCTTACACACATTATCAGGACCAGATCACCTTGCTGCTCTTGCACCCCTTTCAATTGGCTGTACTCGCATGGAAAGTGCTGCAGTTGGTGCACTTTGGGGTTGTGGCCATGATGCAGGTCAGGTCATTTTTGGTTTACTATTTCTACTGCTAAAAGATAAGCTTCACATTGAAATTCTCAGAACCTGGGGCACAATAATAGTAGGCGTGACCCTATTTGTTATAGGTATTATGGGTATTAGAGAAGCTTCAGAAGTTCGTACCCCATGTGTAGTAGGTCTAGATAATGGTGAGTGTGATGTCGGCATCTATGAAACACTAGAGAAACCAATGGTTGTAGGGAAGAAGAAAAAGTTAGGTTTTGCTACTTTTGCCACTGGAGTTGTTCATGGTCTGCAACCTGATGCACTTATGATAGTTTTGCCTGCCCTGGCCTTACCTTCCCGTGTAGCCGGCGCTGCATTTCTTCTTATGTTTTTAGTTGGAACAGTTATTTCAATGGGAAGCTATACTGCTTTTATAGGCTCGTTTAGCGAGGCATTAAAAGACAGAGTGCCTAGAATAACTGAAAGACTGACTTGGGCTGCTTCTTTTGTAGCCATTGCTCTTGGACTTGCCATTATCATCAGCCAATTTCTTGGTTATAGCCTCTACTGATTCACTTACCCAATACTCCATTACCCTTTTCCCCACCTAGTCCCTTTCAATGCCAGATATAAAGTTAAGTATTGAGGAGTAGCCAAAATTTTCTCCCATGCAAATTTGCCTATGAGATTATCTTTTTCCTGCTTTGGATCTTGTTTGTACTACGGATCTCAAATTGTATAAAATGTTTGTTATGAAATGATATTCGGTCTGTTCCCTCATTCAAGAATAGTTAAAAGTTTGACATTGTTCTGTTCATAATGGCCAATACTTTATTGAAATCTGTGAGATGTCTTCGATTGACAAATTAGCACTATTTTCTGTATAGGTTCATGTCATGGGACAGGTGTATTTTGAATTGAGAATATAATAATAGTAATGCTTGCAAACTTCCATTCTTCTTCCCAAA ATAATATTTAAAAAAGAAAAAAAAAATGGGTATTTCAATTTTCGGTTCCAACTGTCTTACTTGGACTCTATCTTCCAAGTTCCAACTCCACCAACCAGCCTCCTTTCGGGGTCACCTTCGACCCTTCTTCTTCCTCCGTCGCCGCCGCCGCCGCCTGAGTCGACGGCGCACAGACTCTATGGAAAGGCTTCTGTCTTCTCCTTCTCCGACTTCCCTCAAAATTAACCCCAATCCATCTCTTATTCTTCCTCGGTTTCGTCGCATTGACTCCGTGAAGCTCAATTTCCCCCTCCCGACGCGCCATGGACTTAAGCCGCTCGGTTTAATCTCCTGTAAGAATGAGAAGCCTTCTATATCTTTGATTCGTTGTTTTTCTTCGTCGAATTCGTCGACTGATTCGATTTGCCAGTCCGATTCTCGAGCCGGCTCACCTAATCCTGATTTCCTGAAACATTTCGCTGGAAAGGAGAAGGTCAAAAGGTCACTCTTTGTTCTGTCTGCTCTTGCTCTGATCCTGATTCAACCAGTCTTTGCACCAGCAGCTTTTGCATCCTTTCAAAATGCAGCAGCTACAACTGGAGGTCCTGCAGCTGCTGCAGTTGGGCGACGACTGATCCAAAGTGAACTATTAAGTAGTGCTTGGACTGGTTTTTTTGCTGGTTGCTTACACACATTATCAGGACCAGATCACCTTGCTGCTCTTGCACCCCTTTCAATTGGCTGTACTCGCATGGAAAGTGCTGCAGTTGGTGCACTTTGGGGTTGTGGCCATGATGCAGGTCAGGTCATTTTTGGTTTACTATTTCTACTGCTAAAAGATAAGCTTCACATTGAAATTCTCAGAACCTGGGGCACAATAATAGTAGGCGTGACCCTATTTGTTATAGGTATTATGGGTATTAGAGAAGCTTCAGAAGTTCGTACCCCATGTGTAGTAGGTCTAGATAATGGTGAGTGTGATGTCGGCATCTATGAAACACTAGAGAAACCAATGGTTGTAGGGAAGAAGAAAAAGTTAGGTTTTGCTACTTTTGCCACTGGAGTTGTTCATGGTCTGCAACCTGATGCACTTATGATAGTTTTGCCTGCCCTGGCCTTACCTTCCCGTGTAGCCGGCGCTGCATTTCTTCTTATGTTTTTAGTTGGAACAGTTATTTCAATGGGAAGCTATACTGCTTTTATAGGCTCGTTTAGCGAGGCATTAAAAGACAGAGTGCCTAGAATAACTGAAAGACTGACTTGGGCTGCTTCTTTTGTAGCCATTGCTCTTGGACTTGCCATTATCATCAGCCAATTTCTTGGTTATAGCCTCTACTGATTCACTTACCCAATACTCCATTACCCTTTTCCCCACCTAGTCCCTTTCAATGCCAGATATAAAGTTAAGTATTGAGGAGTAGCCAAAATTTTCTCCCATGCAAATTTGCCTATGAGATTATCTTTTTCCTGCTTTGGATCTTGTTTGTACTACGGATCTCAAATTGTATAAAATGTTTGTTATGAAATGATATTCGGTCTGTTCCCTCATTCAAGAATAGTTAAAAGTTTGACATTGTTCTGTTCATAATGGCCAATACTTTATTGAAATCTGTGAGATGTCTTCGATTGACAAATTAGCACTATTTTCTGTATAGGTTCATGTCATGGGACAGGTGTATTTTGAATTGAGAATATAATAATAGTAATGCTTGCAAACTTCCATTCTTCTTCCCAAA ATGGGTATTTCAATTTTCGGTTCCAACTGTCTTACTTGGACTCTATCTTCCAAGTTCCAACTCCACCAACCAGCCTCCTTTCGGGGTCACCTTCGACCCTTCTTCTTCCTCCGTCGCCGCCGCCGCCGCCTGAGTCGACGGCGCACAGACTCTATGGAAAGGCTTCTGTCTTCTCCTTCTCCGACTTCCCTCAAAATTAACCCCAATCCATCTCTTATTCTTCCTCGGTTTCGTCGCATTGACTCCGTGAAGCTCAATTTCCCCCTCCCGACGCGCCATGGACTTAAGCCGCTCGGTTTAATCTCCTGTAAGAATGAGAAGCCTTCTATATCTTTGATTCGTTGTTTTTCTTCGTCGAATTCGTCGACTGATTCGATTTGCCAGTCCGATTCTCGAGCCGGCTCACCTAATCCTGATTTCCTGAAACATTTCGCTGGAAAGGAGAAGGTCAAAAGGTCACTCTTTGTTCTGTCTGCTCTTGCTCTGATCCTGATTCAACCAGTCTTTGCACCAGCAGCTTTTGCATCCTTTCAAAATGCAGCAGCTACAACTGGAGGTCCTGCAGCTGCTGCAGTTGGGCGACGACTGATCCAAAGTGAACTATTAAGTAGTGCTTGGACTGGTTTTTTTGCTGGTTGCTTACACACATTATCAGGACCAGATCACCTTGCTGCTCTTGCACCCCTTTCAATTGGCTGTACTCGCATGGAAAGTGCTGCAGTTGGTGCACTTTGGGGTTGTGGCCATGATGCAGGTCAGGTCATTTTTGGTTTACTATTTCTACTGCTAAAAGATAAGCTTCACATTGAAATTCTCAGAACCTGGGGCACAATAATAGTAGGCGTGACCCTATTTGTTATAGGTATTATGGGTATTAGAGAAGCTTCAGAAGTTCGTACCCCATGTGTAGTAGGTCTAGATAATGGTGAGTGTGATGTCGGCATCTATGAAACACTAGAGAAACCAATGGTTGTAGGGAAGAAGAAAAAGTTAGGTTTTGCTACTTTTGCCACTGGAGTTGTTCATGGTCTGCAACCTGATGCACTTATGATAGTTTTGCCTGCCCTGGCCTTACCTTCCCGTGTAGCCGGCGCTGCATTTCTTCTTATGTTTTTAGTTGGAACAGTTATTTCAATGGGAAGCTATACTGCTTTTATAGGCTCGTTTAGCGAGGCATTAAAAGACAGAGTGCCTAGAATAACTGAAAGACTGACTTGGGCTGCTTCTTTTGTAGCCATTGCTCTTGGACTTGCCATTATCATCAGCCAATTTCTTGGTTATAGCCTCTACTGA MGISIFGSNCLTWTLSSKFQLHQPASFRGHLRPFFFLRRRRRRLSRRRTDSMERLLSSPSPTSLKINPNPSLILPRFRRIDSVKLNFPLPTRHGLKPLGLISCKNEKPSISLIRCFSSSNSSTDSICQSDSRAGSPNPDFLKHFAGKEKVKRSLFVLSALALILIQPVFAPAAFASFQNAAATTGGPAAAAVGRRLIQSELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGCTRMESAAVGALWGCGHDAGQVIFGLLFLLLKDKLHIEILRTWGTIIVGVTLFVIGIMGIREASEVRTPCVVGLDNGECDVGIYETLEKPMVVGKKKKLGFATFATGVVHGLQPDALMIVLPALALPSRVAGAAFLLMFLVGTVISMGSYTAFIGSFSEALKDRVPRITERLTWAASFVAIALGLAIIISQFLGYSLY
BLAST of Lsi11G012030 vs. TrEMBL
Match: A0A0A0K0L7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G012930 PE=4 SV=1) HSP 1 Score: 600.1 bits (1546), Expect = 2.1e-168 Identity = 333/383 (86.95%), Postives = 341/383 (89.03%), Query Frame = 1
BLAST of Lsi11G012030 vs. TrEMBL
Match: M5W196_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007041mg PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 4.2e-129 Identity = 265/390 (67.95%), Postives = 301/390 (77.18%), Query Frame = 1
BLAST of Lsi11G012030 vs. TrEMBL
Match: M5VVW8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007148mg PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 1.6e-128 Identity = 260/385 (67.53%), Postives = 295/385 (76.62%), Query Frame = 1
BLAST of Lsi11G012030 vs. TrEMBL
Match: W9SLV0_9ROSA (Urease accessory protein UreH OS=Morus notabilis GN=L484_008378 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 1.6e-128 Identity = 270/397 (68.01%), Postives = 305/397 (76.83%), Query Frame = 1
BLAST of Lsi11G012030 vs. TrEMBL
Match: V4U984_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028645mg PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 4.9e-125 Identity = 266/395 (67.34%), Postives = 301/395 (76.20%), Query Frame = 1
BLAST of Lsi11G012030 vs. TAIR10
Match: AT2G16800.1 (AT2G16800.1 high-affinity nickel-transport family protein) HSP 1 Score: 406.0 bits (1042), Expect = 2.9e-113 Identity = 231/393 (58.78%), Postives = 287/393 (73.03%), Query Frame = 1
BLAST of Lsi11G012030 vs. TAIR10
Match: AT4G35080.3 (AT4G35080.3 high-affinity nickel-transport family protein) HSP 1 Score: 373.2 bits (957), Expect = 2.1e-103 Identity = 224/412 (54.37%), Postives = 278/412 (67.48%), Query Frame = 1
BLAST of Lsi11G012030 vs. NCBI nr
Match: gi|659094234|ref|XP_008447954.1| (PREDICTED: uncharacterized protein LOC103490284 isoform X1 [Cucumis melo]) HSP 1 Score: 622.9 bits (1605), Expect = 4.3e-175 Identity = 339/383 (88.51%), Postives = 348/383 (90.86%), Query Frame = 1
BLAST of Lsi11G012030 vs. NCBI nr
Match: gi|449454211|ref|XP_004144849.1| (PREDICTED: uncharacterized protein LOC101208891 isoform X1 [Cucumis sativus]) HSP 1 Score: 600.1 bits (1546), Expect = 3.0e-168 Identity = 333/383 (86.95%), Postives = 341/383 (89.03%), Query Frame = 1
BLAST of Lsi11G012030 vs. NCBI nr
Match: gi|1009150786|ref|XP_015893207.1| (PREDICTED: uncharacterized protein LOC107427340 [Ziziphus jujuba]) HSP 1 Score: 471.1 bits (1211), Expect = 2.1e-129 Identity = 267/396 (67.42%), Postives = 305/396 (77.02%), Query Frame = 1
BLAST of Lsi11G012030 vs. NCBI nr
Match: gi|645260880|ref|XP_008236027.1| (PREDICTED: uncharacterized protein LOC103334831 [Prunus mume]) HSP 1 Score: 469.5 bits (1207), Expect = 6.1e-129 Identity = 267/390 (68.46%), Postives = 304/390 (77.95%), Query Frame = 1
BLAST of Lsi11G012030 vs. NCBI nr
Match: gi|595801235|ref|XP_007201794.1| (hypothetical protein PRUPE_ppa007041mg [Prunus persica]) HSP 1 Score: 469.5 bits (1207), Expect = 6.1e-129 Identity = 265/390 (67.95%), Postives = 301/390 (77.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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