Lsi11G011680 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G011680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Domain of unknown function (DUF2431)
Location	chr11 : 20192854 .. 20193436 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCACTAATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGTATGGAGTGGATGCAAGAACAATGAGCCACCATCCACTTCTTTGCCTCAAGTTATTTGATCGGATCGTCTTCAACTTTTCACATGCGGGTTTTTACTTTGGAGGAGAGAAAAATGTGATTTAAATCATGTGAGTTTTGTTTGATAACGATTTCGTTTTTAGTTTTCATTTTTTTTATATGCTTGGAGGGGGGGGGGAGGTGTTAGTTTTTAATATTGATGATAGTTTAACTTCAATGGCTTTGTATTTGATAGGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTC

mRNA sequence

AGTCACTAATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGTATGGAGTGGATGCAAGAACAATGAGCCACCATCCACTTCTTTGCCTCAAGTTATTTGATCGGATCGTCTTCAACTTTTCACATGCGGGTTTTTACTTTGGAGGAGAGAAAAATTTTAACTTCAATGGCTTTGTATTTGATAGGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTC

Coding sequence (CDS)

ATGAGGAAGTATGCACATGTTGAGAGAAACTTGAAAGACTTAGAGGACCTTGGTTGTACTGTTTTGTATGGAGTGGATGCAAGAACAATGAGCCACCATCCACTTCTTTGCCTCAAGTTATTTGATCGGATCGTCTTCAACTTTTCACATGCGGGTTTTTACTTTGGAGGAGAGAAAAATTTTAACTTCAATGGCTTTGTATTTGATAGGCTTCACAGGGATGTGGTGAGAGGATTTTTGAGTAATGCAAAGGAAATGGTGGCTGAAAATGGTGAAATTCACATTACCCACAAGACCTCATATCCTTACAATGAATGGAAGATTGAGAAACTAGCAGCAGAGGTAGGTCTCGTTCGGATCGGGTGGGCGTATTTTTGTAAAGAGGACTATTCAGGTTATGAAAATAAGAGAGGTGCCGGGACAGATAGCGATGCAGCATTCCTCATTGGATCATGCAGCACGTTC

Protein sequence

MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNFNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIGWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF

Homology

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BLAST of Lsi11G011680 vs. Swiss-Prot
Match: Y4648_ARATH (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana GN=At4g26485 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 69/154 (44.81%), Postives = 93/154 (60.39%), Query Frame = 1


Query: 3   KYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNFN 62
           KY     N+  L+  GC + + VD  TMS    L L+ +DRIVFNF HAG  F G +   
Sbjct: 55  KYMDAVDNINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFNFPHAGSRFFGRE--- 114

Query: 63  FNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIGW 122
            +    +  H+++VRGFL NAKEM+ E+GEIHITHKT+YP+++W I+KL    GL  +  
Sbjct: 115 LSSRAIES-HKELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKLGKGEGLKLLKK 174

Query: 123 AYFCKEDYSGYENKRGA-GTDSDAAFLIGSCSTF 156
           + F    Y GY  KRG+ G  SD  F +G CST+
Sbjct: 175 SKFELSHYPGYITKRGSGGRRSDDYFPVGECSTY 204

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BLAST of Lsi11G011680 vs. Swiss-Prot
Match: BMT5_SCHPO (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bmt5 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 38/139 (27.34%), Postives = 66/139 (47.48%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNF 61
           +KY      +  +E  G  V++ +DA  +  H  L  + FD I +NF H+G    G K+ 
Sbjct: 98  QKYPDAAEYISKIEINGGKVMHEIDATKLHLHKKLKTQKFDTIFWNFPHSG---KGIKDQ 157

Query: 62  NFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIG 121
           + N  + D  ++ ++  F   +K +++E G I IT   + PY  W ++ LA + G   + 
Sbjct: 158 DRN--ILD--NQKMLLAFFKASKFLLSEKGVIVITLAETKPYTLWNLKGLAKDAGYTSLM 217

Query: 122 WAYFCKEDYSGYENKRGAG 141
              F    Y  Y ++R  G
Sbjct: 218 TEKFDSSFYPEYSHRRTIG 229

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BLAST of Lsi11G011680 vs. TrEMBL
Match: A0A0D2VFN4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G149800 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.1e-38
Identity = 84/154 (54.55%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNF 61
           RKY     N+  LED+GCTV++ VD  TMS HP L   LFDRIVFNF HAGF+F  E   
Sbjct: 53  RKYNEAMANVSRLEDIGCTVIHEVDCCTMSQHPKLMSNLFDRIVFNFPHAGFFFTSEST- 112

Query: 62  NFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIG 121
               +V   LH++VV GFL NA EM+ ENGE+HITHKT++P+N W+IEKLA EVGL  + 
Sbjct: 113 ---PYVI-NLHKNVVEGFLRNAVEMLTENGEVHITHKTTHPFNMWEIEKLANEVGLGMLD 172

Query: 122 WAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
              F   DY GY+NKRG G   D +F IG  ST+
Sbjct: 173 EVPFFYRDYPGYKNKRGEGQRCDQSFPIGKSSTY 201

[Close]

BLAST of Lsi11G011680 vs. TrEMBL
Match: V4UII5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010347mg PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.1e-37
Identity = 78/155 (50.32%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M KY+    NLK+LE+ GCT+L+ VDA TMS HP+L  K FDRIVFNF HAGF+F    N
Sbjct: 63  MAKYSRAASNLKELEESGCTILHEVDAHTMSQHPMLYSKSFDRIVFNFPHAGFHF----N 122

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
           +  +     + H+++VRGFL +A  M+ ENGEIH+THKT+YP+N W+IE L    GL  +
Sbjct: 123 YREHDLFLIQRHQELVRGFLKSAMNMLKENGEIHVTHKTAYPFNRWEIEMLGVGFGLRLV 182

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
               F    Y GY+NKRG G+  D +F +G CS+F
Sbjct: 183 EKVPFYLWHYPGYQNKRGDGSRCDESFPVGVCSSF 213

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BLAST of Lsi11G011680 vs. TrEMBL
Match: A0A0S3T8Z6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G063400 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36
Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M  YA   +NLK+LEDLGCT++  VD  TM+ H LL  + FDRI++NF HAGF  GG ++
Sbjct: 45  MALYAKASQNLKELEDLGCTIVNPVDVMTMAEHRLLQGRKFDRIIYNFPHAGF--GGRES 104

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
                F   + HRD+VRGFL NAK M++  GEIHITHKT+YP+  W IE LA+  GL  +
Sbjct: 105 ----DFSQIQRHRDLVRGFLQNAKLMLSSFGEIHITHKTTYPFTMWYIEYLASCEGLRLV 164

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
           G   F K  Y GYENKRG+G   D +F IG CSTF
Sbjct: 165 GEVEFDKALYPGYENKRGSGLCCDQSFFIGKCSTF 193

[Close]

BLAST of Lsi11G011680 vs. TrEMBL
Match: A0A0L9VP26_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g237100 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36
Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M  YA   +NLK+LEDLGCT++  VD  TM+ H LL  + FDRI++NF HAGF  GG ++
Sbjct: 45  MALYAKASQNLKELEDLGCTIVNPVDVMTMAEHRLLQGRKFDRIIYNFPHAGF--GGRES 104

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
                F   + HRD+VRGFL NAK M++  GEIHITHKT+YP+  W IE LA+  GL  +
Sbjct: 105 ----DFSQIQRHRDLVRGFLQNAKLMLSSFGEIHITHKTTYPFTMWYIEYLASCEGLRLV 164

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
           G   F K  Y GYENKRG+G   D +F IG CSTF
Sbjct: 165 GEVEFDKALYPGYENKRGSGLCCDQSFFIGKCSTF 193

[Close]

BLAST of Lsi11G011680 vs. TrEMBL
Match: A0A0L9VN55_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g236800 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.5e-36
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M KYA   +NLK+LEDLGCT++  VDA+TM+ HPLL  + F RI++ F HAGF      +
Sbjct: 45  MIKYAKASQNLKELEDLGCTIVNEVDAKTMAEHPLLQDRKFSRIIYYFPHAGFCGRESDD 104

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
           +         LH+D+VRGFL NAK M+   GEIHITHKT +PY  W IE LA+  GL  +
Sbjct: 105 YQI------ELHKDLVRGFLQNAKLMLWYFGEIHITHKTKHPYTLWDIEFLASCEGLSLV 164

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
           G   F K  Y GY NKRG+G+  D +FLIG CSTF
Sbjct: 165 GEVKFNKALYPGYNNKRGSGSSCDQSFLIGECSTF 193

[Close]

BLAST of Lsi11G011680 vs. TAIR10
Match: AT1G55790.1 (AT1G55790.1 Domain of unknown function (DUF2431))

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           +RKY     NLK L+ LG  +L+GVDA T+  HP L  + FDR++FNF HAGF+ G E +
Sbjct: 66  VRKYKKARSNLKTLKRLGALLLHGVDATTLHFHPDLRYRRFDRVIFNFPHAGFH-GRESD 125

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
            +       R HR++V GF + A  ++  NGE+H++HK   P++EW +E+LA+   LV I
Sbjct: 126 SSLI-----RKHRELVFGFFNGASRLLRANGEVHVSHKNKAPFSEWNLEELASRCFLVLI 185

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
               F K +Y GYENKRG G   D  FL+G CSTF
Sbjct: 186 QRVAFEKNNYPGYENKRGDGRRCDQPFLLGECSTF 214

[Close]

BLAST of Lsi11G011680 vs. TAIR10
Match: AT4G26485.1 (AT4G26485.1 Domain of unknown function (DUF2431))

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 69/154 (44.81%), Postives = 93/154 (60.39%), Query Frame = 1


Query: 3   KYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNFN 62
           KY     N+  L+  GC + + VD  TMS    L L+ +DRIVFNF HAG  F G +   
Sbjct: 17  KYMDAVDNINILKRYGCDIQHEVDVHTMSFDNSLSLQRYDRIVFNFPHAGSRFFGRE--- 76

Query: 63  FNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIGW 122
            +    +  H+++VRGFL NAKEM+ E+GEIHITHKT+YP+++W I+KL    GL  +  
Sbjct: 77  LSSRAIES-HKELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKLGKGEGLKLLKK 136

Query: 123 AYFCKEDYSGYENKRGA-GTDSDAAFLIGSCSTF 156
           + F    Y GY  KRG+ G  SD  F +G CST+
Sbjct: 137 SKFELSHYPGYITKRGSGGRRSDDYFPVGECSTY 166

[Close]

BLAST of Lsi11G011680 vs. TAIR10
Match: AT5G56060.1 (AT5G56060.1 Domain of unknown function (DUF2431))

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29
Identity = 66/148 (44.59%), Postives = 94/148 (63.51%), Query Frame = 1


Query: 3   KYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNFN 62
           KY   + N++ LE  GCTV++GV+  +MS      L  +DRI+FNF H+G  FG E +  
Sbjct: 56  KYTDGKANVEGLELFGCTVVHGVNVHSMSSD--YRLGRYDRIIFNFPHSGLGFGSEHDI- 115

Query: 63  FNGFVFDRLHRDVVRGFLSNAKEMVA-ENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIG 122
                F  LH+ +VRGFL +A++M+  E+GEIH+THKT+ P+N W IE LA E GL  IG
Sbjct: 116 ----FFIMLHQGLVRGFLESARKMLKDEDGEIHVTHKTTDPFNRWGIETLAGEKGLRLIG 175

Query: 123 WAYFCKEDYSGYENKRGAGTDSDAAFLI 150
              F K  + GY NK+G G++ ++ FL+
Sbjct: 176 EIEFHKWAFPGYSNKKGGGSNCNSTFLL 196

[Close]

BLAST of Lsi11G011680 vs. TAIR10
Match: AT5G56075.1 (AT5G56075.1 Domain of unknown function (DUF2431))

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 57/158 (36.08%), Postives = 90/158 (56.96%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLC-LKLFDRIVFNFSHAGFYFGGEKN 61
           +K+ + + N+++LE LGC+V+YGV+  +M   P +    ++DR++FNF            
Sbjct: 113 QKFKNGKANVEELERLGCSVVYGVNVHSMITKPSVGGSAIYDRVIFNFPT---------- 172

Query: 62  FNFNGFVFDRLHRDVVRGFLSNAKEMVAEN---GEIHITHKTSYPYNEWKIEKLAAEVGL 121
                        ++VRGF+ +A+ +V +    GEIH+ HKT YP++EWK++ L  + GL
Sbjct: 173 ------------HELVRGFMKSARVLVKDEDKGGEIHVIHKTEYPFSEWKLKTLGEKEGL 232

Query: 122 VRIGWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
             I    FC   Y GY NKRG+G  SD++F +G  STF
Sbjct: 233 DLIREVEFCLSHYPGYFNKRGSGGYSDSSFPVGKSSTF 248

[Close]

BLAST of Lsi11G011680 vs. TAIR10
Match: AT5G25030.1 (AT5G25030.1 Domain of unknown function (DUF2431))

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNF 61
           R Y + + N+++LE LGCTV+ GV+  +M     L    +D I+FNF HAG     ++N 
Sbjct: 55  RNYNNGKGNVEELERLGCTVVRGVNVHSMKSDDRLAH--YDIIIFNFPHAG-----KRNK 114

Query: 62  NFNGFVFDRLHRDVVRGFLSNAKEMVA-ENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 121
            F GF             + +A+EM+  E+GEIHIT  T  P+N+W ++ LA E GL  I
Sbjct: 115 VFGGF-------------MESAREMMKDEDGEIHITLNTLNPFNKWDLKALAEESGLRLI 174

Query: 122 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
               F K  +    NKR +G++ D  + IGS  T+
Sbjct: 175 QRMQFIKWAFPSSSNKRESGSNCDFIYPIGSAITY 189

[Close]

BLAST of Lsi11G011680 vs. NCBI nr
Match: gi|823257772|ref|XP_012461569.1| (PREDICTED: uncharacterized protein At4g26485-like [Gossypium raimondii])

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-38
Identity = 84/154 (54.55%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNF 61
           RKY     N+  LED+GCTV++ VD  TMS HP L   LFDRIVFNF HAGF+F  E   
Sbjct: 65  RKYNEAMANVSRLEDIGCTVIHEVDCCTMSQHPKLMSNLFDRIVFNFPHAGFFFTSEST- 124

Query: 62  NFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIG 121
               +V   LH++VV GFL NA EM+ ENGE+HITHKT++P+N W+IEKLA EVGL  + 
Sbjct: 125 ---PYVI-NLHKNVVEGFLRNAVEMLTENGEVHITHKTTHPFNMWEIEKLANEVGLGMLD 184

Query: 122 WAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
              F   DY GY+NKRG G   D +F IG  ST+
Sbjct: 185 EVPFFYRDYPGYKNKRGEGQRCDQSFPIGKSSTY 213

[Close]

BLAST of Lsi11G011680 vs. NCBI nr
Match: gi|763814697|gb|KJB81549.1| (hypothetical protein B456_013G149800 [Gossypium raimondii])

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-38
Identity = 84/154 (54.55%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 2   RKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNF 61
           RKY     N+  LED+GCTV++ VD  TMS HP L   LFDRIVFNF HAGF+F  E   
Sbjct: 53  RKYNEAMANVSRLEDIGCTVIHEVDCCTMSQHPKLMSNLFDRIVFNFPHAGFFFTSEST- 112

Query: 62  NFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIG 121
               +V   LH++VV GFL NA EM+ ENGE+HITHKT++P+N W+IEKLA EVGL  + 
Sbjct: 113 ---PYVI-NLHKNVVEGFLRNAVEMLTENGEVHITHKTTHPFNMWEIEKLANEVGLGMLD 172

Query: 122 WAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
              F   DY GY+NKRG G   D +F IG  ST+
Sbjct: 173 EVPFFYRDYPGYKNKRGEGQRCDQSFPIGKSSTY 201

[Close]

BLAST of Lsi11G011680 vs. NCBI nr
Match: gi|659094511|ref|XP_008448100.1| (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 5.2e-38
Identity = 85/153 (55.56%), Postives = 103/153 (67.32%), Query Frame = 1


Query: 3   KYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKNFN 62
           KY H  RNLK LE+LG  VL+ VDA TMS HPLL   LFDRIVFNF HAGF +G      
Sbjct: 56  KYTHANRNLKILEELGGRVLHKVDATTMSQHPLLYDMLFDRIVFNFPHAGFLYGECNTAQ 115

Query: 63  FNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRIGW 122
                   LHRD+VRGFL NAK M++++GEIHITHKTS+P+++W+I KLA+  GL     
Sbjct: 116 IE------LHRDLVRGFLRNAKRMISKDGEIHITHKTSHPFSKWEIVKLASGEGLALKES 175

Query: 123 AYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
           A F    Y  YENKRG G +S+  F +G+CSTF
Sbjct: 176 AEFYAWQYPNYENKRGDGWNSNGTFPVGACSTF 202

[Close]

BLAST of Lsi11G011680 vs. NCBI nr
Match: gi|567921392|ref|XP_006452702.1| (hypothetical protein CICLE_v10010347mg [Citrus clementina])

HSP 1 Score: 162.9 bits (411), Expect = 4.4e-37
Identity = 78/155 (50.32%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M KY+    NLK+LE+ GCT+L+ VDA TMS HP+L  K FDRIVFNF HAGF+F    N
Sbjct: 63  MAKYSRAASNLKELEESGCTILHEVDAHTMSQHPMLYSKSFDRIVFNFPHAGFHF----N 122

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
           +  +     + H+++VRGFL +A  M+ ENGEIH+THKT+YP+N W+IE L    GL  +
Sbjct: 123 YREHDLFLIQRHQELVRGFLKSAMNMLKENGEIHVTHKTAYPFNRWEIEMLGVGFGLRLV 182

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
               F    Y GY+NKRG G+  D +F +G CS+F
Sbjct: 183 EKVPFYLWHYPGYQNKRGDGSRCDESFPVGVCSSF 213

[Close]

BLAST of Lsi11G011680 vs. NCBI nr
Match: gi|920716391|gb|KOM56479.1| (hypothetical protein LR48_Vigan10g237100 [Vigna angularis])

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-36
Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 1


Query: 1   MRKYAHVERNLKDLEDLGCTVLYGVDARTMSHHPLLCLKLFDRIVFNFSHAGFYFGGEKN 60
           M  YA   +NLK+LEDLGCT++  VD  TM+ H LL  + FDRI++NF HAGF  GG ++
Sbjct: 45  MALYAKASQNLKELEDLGCTIVNPVDVMTMAEHRLLQGRKFDRIIYNFPHAGF--GGRES 104

Query: 61  FNFNGFVFDRLHRDVVRGFLSNAKEMVAENGEIHITHKTSYPYNEWKIEKLAAEVGLVRI 120
                F   + HRD+VRGFL NAK M++  GEIHITHKT+YP+  W IE LA+  GL  +
Sbjct: 105 ----DFSQIQRHRDLVRGFLQNAKLMLSSFGEIHITHKTTYPFTMWYIEYLASCEGLRLV 164

Query: 121 GWAYFCKEDYSGYENKRGAGTDSDAAFLIGSCSTF 156
           G   F K  Y GYENKRG+G   D +F IG CSTF
Sbjct: 165 GEVEFDKALYPGYENKRGSGLCCDQSFFIGKCSTF 193

The following BLAST results are available for this feature:

BLAST of Lsi11G011680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4648_ARATH	2.2e-28	44.81	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana GN=At4g26485 PE=4 SV=1	[more]
BMT5_SCHPO	2.1e-07	27.34	25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 9...	[more]

BLAST of Lsi11G011680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2VFN4_GOSRA	2.1e-38	54.55	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G149800 PE=4 SV=1	[more]
V4UII5_9ROSI	3.1e-37	50.32	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010347mg PE=4 SV=1	[more]
A0A0S3T8Z6_PHAAN	2.6e-36	53.55	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G063400 PE=...	[more]
A0A0L9VP26_PHAAN	2.6e-36	53.55	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g237100 PE=4 SV=1	[more]
A0A0L9VN55_PHAAN	7.5e-36	52.26	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g236800 PE=4 SV=1	[more]

BLAST of Lsi11G011680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G55790.1	1.3e-34	45.81	Domain of unknown function (DUF2431)	[more]
AT4G26485.1	1.2e-29	44.81	Domain of unknown function (DUF2431)	[more]
AT5G56060.1	2.7e-29	44.59	Domain of unknown function (DUF2431)	[more]
AT5G56075.1	2.0e-24	36.08	Domain of unknown function (DUF2431)	[more]
AT5G25030.1	1.7e-18	36.77	Domain of unknown function (DUF2431)	[more]

BLAST of Lsi11G011680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|823257772\|ref\|XP_012461569.1\|	3.0e-38	54.55	PREDICTED: uncharacterized protein At4g26485-like [Gossypium raimondii]	[more]
gi\|763814697\|gb\|KJB81549.1\|	3.0e-38	54.55	hypothetical protein B456_013G149800 [Gossypium raimondii]	[more]
gi\|659094511\|ref\|XP_008448100.1\|	5.2e-38	55.56	PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]	[more]
gi\|567921392\|ref\|XP_006452702.1\|	4.4e-37	50.32	hypothetical protein CICLE_v10010347mg [Citrus clementina]	[more]
gi\|920716391\|gb\|KOM56479.1\|	3.7e-36	53.55	hypothetical protein LR48_Vigan10g237100 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019446	DUF2431

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010467	gene expression
biological_process	GO:0034660	ncRNA metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011680.1	Lsi11G011680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019446	Domain of unknown function DUF2431	PFAM	PF10354	DUF2431	coord: 2..137 score: 3.8
None	No IPR available	PANTHER	PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	coord: 1..155 score: 5.8
None	No IPR available	PANTHER	PTHR11538:SF42	SUBFAMILY NOT NAMED	coord: 1..155 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G011680	Wax gourd	lsiwgoB118
Lsi11G011680	Wax gourd	lsiwgoB123
Lsi11G011680	Wax gourd	lsiwgoB128
Lsi11G011680	Cucumber (Gy14) v1	cgylsiB258
Lsi11G011680	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi11G011680	Cucumber (Gy14) v1	cgylsiB618
Lsi11G011680	Cucurbita maxima (Rimu)	cmalsiB100
Lsi11G011680	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G011680	Cucurbita maxima (Rimu)	cmalsiB514
Lsi11G011680	Cucurbita maxima (Rimu)	cmalsiB711
Lsi11G011680	Cucurbita moschata (Rifu)	cmolsiB080
Lsi11G011680	Cucurbita moschata (Rifu)	cmolsiB151
Lsi11G011680	Cucurbita moschata (Rifu)	cmolsiB457
Lsi11G011680	Cucurbita moschata (Rifu)	cmolsiB705
Lsi11G011680	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G011680	Cucurbita pepo (Zucchini)	cpelsiB231
Lsi11G011680	Cucurbita pepo (Zucchini)	cpelsiB526
Lsi11G011680	Cucurbita pepo (Zucchini)	cpelsiB605
Lsi11G011680	Cucurbita pepo (Zucchini)	cpelsiB662
Lsi11G011680	Wild cucumber (PI 183967)	cpilsiB101
Lsi11G011680	Wild cucumber (PI 183967)	cpilsiB506
Lsi11G011680	Cucumber (Chinese Long) v2	culsiB104
Lsi11G011680	Cucumber (Chinese Long) v2	culsiB494
Lsi11G011680	Melon (DHL92) v3.5.1	lsimeB096
Lsi11G011680	Melon (DHL92) v3.5.1	lsimeB108
Lsi11G011680	Watermelon (Charleston Gray)	lsiwcgB097
Lsi11G011680	Watermelon (Charleston Gray)	lsiwcgB116
Lsi11G011680	Watermelon (97103) v1	lsiwmB091
Lsi11G011680	Watermelon (97103) v1	lsiwmB106
Lsi11G011680	Cucumber (Gy14) v2	cgyblsiB090
Lsi11G011680	Cucumber (Gy14) v2	cgyblsiB093
Lsi11G011680	Cucumber (Gy14) v2	cgyblsiB462
Lsi11G011680	Melon (DHL92) v3.6.1	lsimedB093
Lsi11G011680	Melon (DHL92) v3.6.1	lsimedB102
Lsi11G011680	Melon (DHL92) v3.6.1	lsimedB116
Lsi11G011680	Silver-seed gourd	carlsiB124
Lsi11G011680	Silver-seed gourd	carlsiB290
Lsi11G011680	Silver-seed gourd	carlsiB928
Lsi11G011680	Cucumber (Chinese Long) v3	cuclsiB109
Lsi11G011680	Cucumber (Chinese Long) v3	cuclsiB112
Lsi11G011680	Cucumber (Chinese Long) v3	cuclsiB529
Lsi11G011680	Watermelon (97103) v2	lsiwmbB080
Lsi11G011680	Watermelon (97103) v2	lsiwmbB086
Lsi11G011680	Watermelon (97103) v2	lsiwmbB104