Lsi11G010580 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGGATTGATATTAGTCTGGATACAACAAAATAATTCTATTAGATCTAATGTAAAAAACCAGATTTGAATGATCCTGTATTAAGAGTTAAATTGGCTAAGGGTATGGGTCATAATTATTACGGAGAACCGACATGGCTCAGTGATCTTTTATATATTTTTTCAATAGTAATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATAGTTTCAAATACTTCATAATAGCATTCATCTGACTTGTAATAGAACTTATATTTGATATAAATATTAGTAGTGTAGAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAGTATTTTTGCCCTGGTGGATCTCTCTTTCATTTAATAAAAGCCTAGAATCTTAGGTTACTAATTGGTGGAATACTGGTCAATCTGAATTTTTTTAATGATATTCAAGAAAATAGTATTATAAAAAAAAGTTATACAATTAGAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTAAACAATCTAATGTTTGTTTACTTTGTACATAAGTAAAACATTCAAAATTGTACTTATTCCTTCTACCCATCCCGAAAGATGCCTCCTATATTCGAGTAACATTTTTTAGTAAATAGCATGCCCCTCAACTTTTCAAAAGTTTCAAAAATACTCTAACTCAAAAAAGTTCAAATATATCTTCACCGAAATTATGAACAGAAACTGTTAATACCTCGTTGCAAAAATAAATTTAAAATAAAAAGAAAGTTTAAAATTGTTCCTAACATTAATATGGTGATTAATTTATTTGAAGTTTTCTTAAGTTCGAAAAGAATGAACTTTAAACAAATTATAAAAATATTTTCATTCTTTTCATATATCAATTCTTAGGTTACACCAATTTTCTCATCAACCAAAATTTTAAGTTAAAACACAAAATCTCATAAAATCTCACAAAATTCTAAAATCAAAATCTCCCCTTAAACACACTCAACTGCTAACGTTTTTTTTTTTTTTTTTTTTTTTNACATGGCTCAGTGATCTTTTATATATTTTTTCAATAGTAATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATAGTTTCAAATACTTCATAATAGCATTCATCTGACTTGTAATAGAACTTATATTTGATATAAATATTAGTAGTGTAGAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAGTATTTTTGCCCTGGTGGATCTCTCTTTCATTTAATAAAAGCCTAGAATCTTAGGTTACTAATTGGTGGAATACTGGTCAATCTGAATTTTTTTAATGATATTCAAGAAAATAGTATTATAAAAAAAAGTTATACAATTAGAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTAA ATGGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATATGTAGAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTAA ATGGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATAATTGGTGAACCCATAGATCCATTTGCAACTCCTTTGGAAATATTGCCGAAATGGTATTTCTTTCTCATATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATATGTAGAGAGTTAACGAATGAAGTGAGTTCATTAAAAAATCAAAGACGAAAAAATGGCAAAAATGAAAGCGTTCATTCCCCTTTTATATCTTGCATCTATAAGGAACTCTTTCTCTTGGACGAAATGCTAAAAGAATATCCAGAAATACATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAACGATCCAATTGATCAAGATGCACAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATTTGTTTTGTTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAACTTGTTATTGTTAACTCTTGGGTTCAAGAGTTTTTATATAACTTAATCGACACAATAAAAACTTTTTCTATTCTTTTATTAACTTATTTATGTATAGAATTCCATTCGCCCCATGGTTGGGAACTAATGATCGGATCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTATATCCAACTTCGTTTCCACTTTTCCAGTCATTCTTAACACAATTTTTAAATATTGGATCTTCCGTTATTTAAATCGTGTATCTCCGTCACTTGTAGTGATTTATCATTCAATGAATGACTAA MGTIACNVGLAVLEPSIIGEPIDPFATPLEILPKWYFFLIFQILRTVPNKELTNEVSSLKNQRRKNGKNESVHSPFISCIYKELFLLDEMLKEYPEIHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVILSGYSILGNEELVIVNSWVQEFLYNLIDTIKTFSILLLTYLCIEFHSPHGWELMIGSVYKDFGFSHNDQIISNFVSTFPVILNTIFKYWIFRYLNRTIACNVGLAVLEPSIIGEPIDPFATPLEILPKWYFFLIFQILRTVPNKLLGVLLICRELTNEVSSLKNQRRKNGKNESVHSPFISCIYKELFLLDEMLKEYPEIHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFVILSGYSILGNEELVIVNSWVQEFLYNLIDTIKTFSILLLTYLCIEFHSPHGWELMIGSVYKDFGFSHNDQIISNFVSTFPVILNTIFKYWIFRYLNRVSPSLVVIYHSMND
BLAST of Lsi11G010580 vs. Swiss-Prot
Match: CEMA_CUCSA (Chloroplast envelope membrane protein OS=Cucumis sativus GN=cemA PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 6.3e-82 Identity = 153/166 (92.17%), Postives = 158/166 (95.18%), Query Frame = 1
BLAST of Lsi11G010580 vs. Swiss-Prot
Match: CEMA_GOSHI (Chloroplast envelope membrane protein OS=Gossypium hirsutum GN=cemA PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 7.0e-81 Identity = 151/180 (83.89%), Postives = 163/180 (90.56%), Query Frame = 1
BLAST of Lsi11G010580 vs. Swiss-Prot
Match: CEMA_GOSBA (Chloroplast envelope membrane protein OS=Gossypium barbadense GN=cemA PE=3 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80 Identity = 150/180 (83.33%), Postives = 162/180 (90.00%), Query Frame = 1
BLAST of Lsi11G010580 vs. Swiss-Prot
Match: CEMA_MANES (Chloroplast envelope membrane protein OS=Manihot esculenta GN=cemA PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.9e-78 Identity = 159/233 (68.24%), Postives = 179/233 (76.82%), Query Frame = 1
BLAST of Lsi11G010580 vs. Swiss-Prot
Match: CEMA_VITVI (Chloroplast envelope membrane protein OS=Vitis vinifera GN=cemA PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.9e-78 Identity = 148/180 (82.22%), Postives = 162/180 (90.00%), Query Frame = 1
BLAST of Lsi11G010580 vs. TrEMBL
Match: X2F1U1_LAGSI (envelope membrane protein, chloroplastic OS=Lagenaria siceraria GN=cemA PE=3 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 7.5e-82 Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. TrEMBL
Match: A0A0S2IE38_9ROSI (CemA OS=Cucurbita argyrosperma GN=cemA PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 9.8e-82 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. TrEMBL
Match: A0A0S2IGQ1_CUCPE (CemA OS=Cucurbita pepo subsp. pepo GN=cemA PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 9.8e-82 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. TrEMBL
Match: A0A0S2IF82_9ROSI (CemA OS=Cucurbita lundelliana GN=cemA PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 9.8e-82 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. TrEMBL
Match: A0A0S2IDY0_9ROSI (CemA OS=Cucurbita argyrosperma var. palmeri GN=cemA PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 9.8e-82 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. TAIR10
Match: ATCG00530.1 (ATCG00530.1 CemA-like proton extrusion protein-related) HSP 1 Score: 266.5 bits (680), Expect = 3.1e-71 Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 1
BLAST of Lsi11G010580 vs. TAIR10
Match: ATCG00730.1 (ATCG00730.1 photosynthetic electron transfer D) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22 Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 1
BLAST of Lsi11G010580 vs. TAIR10
Match: AT4G31040.1 (AT4G31040.1 CemA-like proton extrusion protein-related) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-09 Identity = 28/88 (31.82%), Postives = 51/88 (57.95%), Query Frame = 1
BLAST of Lsi11G010580 vs. NCBI nr
Match: gi|595645240|gb|AHM88703.1| (chloroplast envelope membrane protein (chloroplast) [Lagenaria siceraria]) HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81 Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. NCBI nr
Match: gi|952954401|gb|ALO21765.1| (cemA (plastid) [Cucurbita argyrosperma]) HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81 Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 1
BLAST of Lsi11G010580 vs. NCBI nr
Match: gi|952954755|gb|ALO22113.1| (cemA (plastid) [Cucurbita ficifolia]) HSP 1 Score: 310.1 bits (793), Expect = 7.0e-81 Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 1
BLAST of Lsi11G010580 vs. NCBI nr
Match: gi|346578203|ref|YP_004841795.1| (chloroplast envelope membrane protein [Cucumis melo subsp. melo]) HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80 Identity = 154/166 (92.77%), Postives = 157/166 (94.58%), Query Frame = 1
BLAST of Lsi11G010580 vs. NCBI nr
Match: gi|952954800|gb|ALO22157.1| (cemA (plastid) [Cucurbita foetidissima]) HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80 Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |