Lsi11G010120 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G010120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Electron carrier
Location	chr11 : 17175631 .. 17192482 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGCTTTGAAGCCAAGCAGGCGAGGTTTCAGTTTGAAGGTTAACCAATTAGAATGTCATCGTTTTCTTTCACTACCCCATATTATTCCTCTCTGCACTGCTCTACGATCGTTCATTCCGAACAGAGCTTCAACCAAGCAGCCACTTCCGTCCTTTTGAATCGAAACCTCTCCCCGATTCCTGCAATTTTTTGTAGAATCTCTTCACGCAGACGCAGATTTCACGCGAACTCTGTTCGCTCAGGCGCTGAAACTGAAGAATCTCGAACTCAGCATTCGCCCGAAAGTAATGCAGTTTCGAGCAATGGAAGCAAGCTTTCTACAAGTTTTCTATCTTATCTCTGCCCCTTGCTCAAGCTTTTCGCTGTGAGTAAATTGTAAATATATATATATATATATATATATATATATATATATATAACTTTTCACGTTTATATGGTTTTCAGTTAGCGTTTCCGATGAAGTGTTCTTGATCACTTGATATTGATATCCACCGAAAGAGTCTAATAATTGTCGCGTGTTACTTGTACTCTTCATTCGATTTCTTTTAGTCCAGAGATCAGGGTCCAAATTCATTTTCTTTCATTTCCTTTAACTTTACCTCCTCACGTTCATAATCTTTTATCTTCATTTTTTTCTTCAATTGTAGGGAGGAGATCCTTCGAGAGAGAGGAATTTTACTTTGGAGGTAATAATTTGTCGCTCTTTATTTCATTTATAACCATCGTAGTTAGTTCTACAATAACGTAATTTATTTCCGGAACATATTTTAGGCTGGTACAGTTGTTGTTATGTTGCTAAGATTATATATTATATCAATGCAAATAAATAGAAACGACAGTTTAGACCTACGACTACTTTGTGACTGTTTATTACATAATTGCATAGAGATAACAGACTGATATTCACACATAGGATTAACTAAATGTAGCCTATCTGCCCTGAAATGTTCTTTTCTCTCTCCAAAAAAGAAATGTTCTTCATTATATCCTGTCATTGGAATCTCAAGCTTTCCCAAACACTTTAACATGGTGACTACTAACTAATAACACCATTATGTTCTAGCATCACCAAAACTTTAACCTAGTAACTAATAACATGTTTAGGATGAAACAAGTATTTATCTGGCCATGAAAATGCTCATATTTTCTCCACCTTTTATTTGTTGCTACCAGCGTTTGCCTGCATTGCTCAATCATGCAACTCTAAATACCTTGCTAGTAATCTAACATCCTTCTATGACATCTCTCATCTTGTTACTAAAGAGCAGGTAGCCACATCTTCCTTATCTACATTGGCAAGGCTTCCATGGGGCTCAAGAACATTTTCAGATTATTCTCACAGCAATAGGAATATTAATTTGGAACCTCTGTTGCCTTTGCAACTCTATGAATTTGGTAATGTCTGTTTCTAACTTTGTAGTTATCTTATGTTGGAAGTGAAAATAACATTTCTTCTTATATCTCGGGGTTTAATTTTTATGGAATGCAATGTTGATAGAAAGCAGAGATTATATTGAAATAAAATATATGTTACTCATGAAGGAGGATGGTTTTTATGGAATTTACAAGGAAGATATCCAGAGTCAAAGTGGCTTATTGAATTGGTTATAAACTATAATAAGAAATGCAGTTTTGAAATATACTATCGTGGAAATCTAGAAAAAAGTTGTGTTATAAGCTACTCCAAGTTTTTTCTGGAGATGTTAATCTTAGCTATTGAGTTGCAAGATTTACCAAGTTTTCTCATTTCAAATATTACTTGTCAGCAGAAGCATGCCCCTTTTGCAGGAGGGTTCGAGAGGCCTTGACTGAACTGGATCTTTTAGTGGAGGTATGAAATGAATTTGGCTGACCTAGTTTTTGTTGCATGAATATCCCATGTCTAATTTTAATGTAAATTTGAGCTGTTAACTGTAAAGCCATCTCTAGTCCATTGACTGTTCTAAAATCGTCCTGATACCTTAAAACAGATTTATTTCATGCAAATTGATTTGGTTTTGTTTTGATTTTAGACTGATTTCTTTGAATGTGGTCTGATGCACGCTTTTATTTCACTTAAATGGATGGGAAAGATGCATAAAAAACTAGTTTTGATTGCTTCCTGTAGCTCAATGATTCAATTATTTCTGTATCAAGTTTCTCTATCACCACTTGTTAGAACCACCTTTCTGATTGCTTTTACTTCTAAAAGAAGGTGCTTAATTTTTATCACTCATGCTGTATATGCTATGTGTGACCATCTGATACAATCCAATTTGAAAAGGATAAGCGGCTGCATACTCTCTTATCTAGTTATCTATTCTGTTATCAACTGTATAATGTTCTATCATATTATTCAATTGAGAATAAATATTCAGGAAGTTTTTGGAAGTTGCATTTTAGTCAGTTTTCTCCATTAGCTGGAACAAATTTTATCTTTCGAGATACTCCATCTTAACTGTCTTATATCAGGCCTTCCTCCTCCTCTTTCTCTCTCTCCTCTTTTTCTTTTTAAATGTGAAAGTAGCATGATTTAATGCTATTGAAGATATGTTTGCGTGAACTCATTTGTTAGAATCATTAGCTGGAATTTCTATAGAGTTATTTCTTGATGATTCAGGCTTGTTCCTCTTCTGATTCTTTGTGGGGGCCTGAGGTCTATTCCTTCTCACTGAATAACAATTTGAAATCCTAATAGTCTCTCGTCAAAAGAAATCCCAAGTCAAAACTAAATTGGTGGGAGTTAGGTGCTAGCTGACATGTAACAATTGTTATAGATGACATCATATCTTTCTAAATTGATATTTGTAAATTTTACTCATCCCTGTAAACTTGGAGTGCGTGGTCTCTTATGAGAAAAAAGCTTCATCCATCCTTCGGGAGGGTTCATTGTCGGCTTGAATCTAGCTCTCCAATCCTCTTTTGCGTTCCTTTCCTCTCTACTGTCACAGTTTTTCTTTTTGATCGTCAGAGGTTGCTTTGACTTGGGTGTTGATTCGCTTCGGGGATGTGCTTCGGTTTGATGTTCCTTGGATTGTTGTTTTGTTTGGTCTCTCCGTTTATGTGGGTGTCATGCATCATCAATCCATTTTGCATCTTTCTGTATTTACCACCTTTTTGTCTTCCCCCTCCCCTTTGGTATCATTGTATTTTTCCTTCTTTAGATGGCGTTGCTCTCTTGTATCATCTTGTAATTGGGGGGGGGGGGGGGGGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGGGGGGGGGGGGGGGGTAGATGTTGTACTTTGGATATTTCATTTATCAATGAAATGGTTTCTTATCCAAAAAAAAATATTGATCCCAGTAAACTTGTGTCAAACTATCACTTTTTGTTTGCTTTGAATATTAAGTCTACAGTTAATGCCTTGCATCAAACTATTAGCTCAATGTATTAGCTGCTCAAAACTTACCGTCATATTTTGCAGGTTTATCCTTGTCCTAAGGGTTCCATTAGACACAGGAACATAGTTAAGAAATGTGGTGGCAAAGAGCAGTACGTGGTTCTTTCTGTTTAGTCCATATTTCAGTTTATTCAAAGATCATTTTGAGGTGCCATAAAGAATTAATGAATTCTGATAAAAGGTATTTTAAAATGTTAAATATAAAAGTTAATCAGTTGTCTATTTCTTTTCTGACCTACTAATGTACAGTTTCTAAGAAACTACCTTGAATTAGTCAAATGGTCAAAGGATAACTTGTAAGCCCAAATGCCTTTGAAATCACGAGTTTAAATGACTAGGGGTTAAACAATATTGTGAGTCCTTTAATACTGAGCATTGCATGGTGAAGCAATTGCCCTATTAACTGAATCTAGATAATTGAAATCTTTGAATGTCCTAAATTACAGATGTCTGACATCTTTAAATAACCATTTTGTTTTGTAAGAATATTTTTACGGATAATTGGGATTGGGAATACTTAGATAACTATGTTTGTTTCGCAAGATTTGTACTTGGAAATGCCTTTAATTTACATAATTTTCCAAAAATGCCTTTACGACTATTCATTAATCTATACATCAATTTAATATTATAATATCAGCATCTATCAGTGATAGACTTCTATTATTTCTATCGCTGATAGATCCTGATAGACTTCTATTCGCGTCTATCACAACTATCTAAAAAGTTTGCTATTTTGTGTAAATAGTTTCCCTTATTTTTCTAATTTTAAAAACTCCCCTGAAATTAATCTATATTAATTTAAGATTTTTTTTATAAAAATAAAAATTAGTTTAAATTTAAATTTGAATATATATCTAAAAAAAAAAAAAACAATTACGAAATAACTAAGAAGAATGATATATATCGTTGATAGTATTTATTATATATATATCAAAGGAAAAGGAAAGGAAGAGTAGAAAAGTAAAAAAGAGATGCCTTCAATATGGAAATCTTGAAAACCCATGTTACAGGAGGGTCATTCAAAATTCATCAGATGCTCCTGTACAGGCATCTTATATTACCGCAAAACAAATGTGATAATCTCGATGTCCATCTTATGGCAATCTTGAATTCCCATGAAACAAACGCCCCTTACGATTATTAAATACATCATATTACTTTATCTACATAAAATTAAGATGGACTTGTAAAGTAGTTTAGAGTATATATGACGGGATATTTTCTATAATTAATTTTGTTAGCCACTTTTAGCAAGGATTCGTATTCCTGGATGATAAGATTTTTTTGATGAAAATAGATTTTCTTTAATTCTTATTTAAAAAGAAAAAGAGGATTTTGCCAAGGCCTATGATCTTGTAGATTAAGACTTTTTAGATAAGGTGCTTTGGAAGAAGGGTTTCGATTGTAAATGGAGAACTTGGATTTCAAATTGCATTAGAGCTATCGAGCTTCCATTCTTCAATGGCAACCTGAGAGGTCGGATCATTGGTCTTTAGCCGCTTTTGTCTCTTAGAATCTTCTAAGGATCTCTTTGTTGACCTTGTTAAAGCTTAAAGGTGTAGCATCGGCCAGAGGGGAAGAAAATGGCTGATCCTTAGAGTAGAGAGAAGGGGGCAGGAGTAAGGACTCATAAGATGATAGGATGGTGGGTGCACGATTTTTATTGGAAACAAACCTTAATGTTGGCCAAGAAATGCTTTTGGGATGCTTGATTCAAGATCATTCATATGATCAAAGAGAAAACTAAGTTCAGTGATTTGTTTCATTTAAATGCTCGGAAGATCATAGAGCAGCTACTAATGTCCACAATTTCAATAGGCAGGTGGAAATTTTTTGGAGCATTTGGTCAAGGCCGTGATTTAGAACATCCAGTTAGAATGACATAGAAGAATTTATAAGGCGGAAATTGGAAAACTAGGAATGCAATGAAATCGCTTGTAGCTAACATTTTTTTGGCTTATGTTAATGTTATTGCAATTATACACATTTGAATGAGAAAAAATGGTTCCATTCTTCCACTTCATTTACCTTAACCAACAAAATATACTTTTTGTAATTAACTCTTCTTGACGCAGCTTTTTGTGAGCCCCTTCAATAGTGTAGGAGGCATGGTTTTATTCTGCGACTTTATTTACGATTTTAAGCAACCATCAAATAGCATAGGAAGTAATTATATGCTTTTATTTTTTTTAAACATATTTATTCTCAATTAAAACTTGTAAATGCAGGTTTCCTTTTCTTATTGATCCAAATACCAGTACTTCACTGTATGAAAGTGGTAAGTGATTAAGCTTTCGATTGTTACAGTATCTACTCCTCGACTTTTCTAATGCTTTAATTCACATTTTTGGTTGTGATCGTTCTTGTTTTTCATGTATGCTATCGTGTATATCAAGTCATGCATTCTGAATTCTGAGTCCCAATTTTTAACAATTTGGCTCATTGTTAATTTCTTTGCTATACTATAGAAAGTTGCCATCATATCCATTTTCATCCATTGATCAGTTTTCTTGCTAGTATCCAGTGTTATCAGATACTAATATCAACTTCTTGTATTCCATGTAGTATGTGTGATTTGTGAATGGAGCGGGGGGATGCTCTGGAATTTGAAGAAAAGATCATAATCTACTTCACCAGATATATTTAGTAATTTTTGAAAAATCAAAATCTTTCATTAAAGTTGGTCAGGGATAAAGGGGAAGACAAGCCATCCCCCAAATCAATTGAGATCAAATTCTCTCATCAAATAAAAGAATAATAGTTATTAAAGGTTTAGATTGGACGCTACAAGACAAGGTTTTAAGTGATACGAGATCTCTTAGTTCTAAAAATCTTCTCGTCATTCTTCTTTCTCCACCTTTAGTTAAGAGGCAAGAAATCATGGCTCAAATGAAAAGTATGAGGACGGGGATGGAGCATCCACAAAGGGGAAACAAAACTAACTACTTGAAAGAAGAACATTTCTCATCATGGAGTATCCTTGGTAGTTTTTGTGCTGCAGCATAAATAATTAAACACCCAGTTTATGCGTTTGACGAACTAACTCGTGAGATAAAGTCAGGAAGCAAGTATCTTCTTGACATAAGAAACAAGACATTACATTAAACTCGTGAGATAAAGTCAGGAAGCAAGTATCTTCTTGACATAAGAAACAAGACATTACATTATGTTGAAAAGGAAGGGCCAGAGAAAAGGATGAGGACAAGGATGCTCATCTTCATAGGGAAGATGATTACAATATTTTAACCAAAAACTAATTACAATATTTTACCCAAAAAAATTACAAAGAACAGTGTGCAATACAAACTGAAAAAAGAGGATGTGAAGTAGCTTCTTCTTCCTTCAAAAGCTTCTCAACTTCTCTTAGTACCAGCTTCTTACACGTAACTCACCATGAAGGGGAGAGAAAAAAAATGAATTCGTCTTTCGAGGCAATCTGCTGTATTAATACCACCATGACTAAGCTTCCAAAGAAAAACCTTTATCTTCTTGGTATATAACCCTTTCCAGATTGCAGAAAATATGGATGTATTAACATGGCTTATGGATTCACCAAAAATTCAATCATAAAGCTCAGTGTGAAATTTTTAGATGATTCTAAGAATCAATTCCATGAATCATTCACATCAGTTAAAGAAGTAGATTGTAAAAGATGGGAAAGAGAGGCCCATTCCACTATCTCATCATTTTTAGGATGTTGTCTAAGACCCAGATCCCAGATTCTGTTTTTGAAATTCCAAATATCAGCCACAGTTGCATTAGTATGACTTGAAAGCCTATAGATCTTCGGGTTCATGGTAGCCAAGTCATTCTCATTAACCCATACATCATGCCAAAAGGAGATTGCCATTGCCTAGTACTCTTCGAATATGTGATTTTATCAAATTGTTTAGTGCTGAGATGCGCCTCCAAGGAGCCCTGAAAGAGCCTACAACAGAAGACGATGGCCAATGTTAATTAACTGCCAAGTTGTAGTATTTCGCTGTAATTACATTCTGCCAAACTTCTCTTCCTCACAAAGAAATCTCCAAATCCATTTGATAATAGAGCCTCAGTTTGCGGGGGAGTGTCTGCTCTGTTGTGGGATCTTTGGGAGAGTGGAACAACAGAGTGTTTAGAGGTGTGGATAGGGACACTAGTGAGGTTTGGTCCTTGATGAGGTTCCTTATTTCTCTTTGGACTTCGTTTTAAAGATTTTTGTAATTATTCCTTAGGTAACATTTTATTTAGGTGGAAACCCATTCTCTAGGGTTTTTTTGCGGGCTTGGTTTTTTGTATGCCCTTGTATTATTTCATTTTTTTCTCAATGAAAGCAATTATTTATTAAAAAAAAAGAATAAAAAGTTGAGTAACAACTTTCATTGAGAAAAAAAATGAAAGAATACAAGGGTATGCAAAAAGCCAAGCCCACAAACAGACACCTCCTTAGAGGAAAAGGCTTCGGTTATACAAAATAACGTCTAAAGAGTAATTACAAGGGACCAAACTTCACTAGACTCCCTCTCCAACCCTTTAAATACTCTGTTGTTCTGCTCGCCTTAGAGGTCTCACAAAATAGAACACACCCCAACAAACCATAAAAATCGGCCCTTATCACAAAAAGGTAGATGGGAGAGGACCTTCCCGATCAACTCACTGATATCCGGAGCGAGGGAAAAGCGAAATGTCTAAAAGAACAAATTCCTAACGGAAGTCACAAACTCACATCTCTAAAGAATGTGATCCAAGTCTTCTACTGCCTTCCAACAAAGAATACAACAAAACAGACCAATTATCAAAGACAACTTTCTCACAAGCCGGTCCAAAGTGTTAACATGACCATGTAACATATTCCCGACGTAAAATTTCTCACAAGAAGTTGAATTTTGTCCCAACTAACATTGTGCATTCCTCCATCTTCTTTAGCTCCTTTGCAAAGAAAATCCCCAAGGATCTTTTCAATTGATTTTGCAATTTTGGCCGGAAATAAAGAGAATATAAATAGGCATATTAGAAAGAGTTGATTGAGTAAGATACGTTATGGTGGATCTTCTCCATCACTGATTGCCAAAACAGAGAACTTTTGGAGTTACCCTAAAGGAAGCCCAAGATAAATTGAGGGCCATGTACCTACCTTGCACCAAAATTTCAAAGCCAACTGATTCCTATCTTCTTGAAGAACATGAACGTGTAGTAACTCACTCTTGCTGATGAATGATAATCCAGGGAGCACAAGCACTTTAGTTTGGTTAATGTGTTCATGTACGATATTTGTTGGATATTTGGACACTCCATCAAACATTTGTTAATGTAATAGATGTATTAGACACTAGTTGTATAAAATCAAAGTAGGATCCAATATTTGTTAGGACATGCATTAAACACTCGTTAAAGCATACTAAATAGACATATAAAAAAAAAAAAAAAAAAAAAAAATGAAAGCAAAATACATCAAACTAATTCTTTAAGCATATAAATGCATTAACTCATTGAATTTGAATTTCCTTATATAAAAATGATATATATTTACAAAAATGTATATTTTAATAAACATGTCTTGCCGTGTCTGTGTCCTAGATTTTTAAAAAAATTACGTGTTGACGAACAATATAGGTTTCATCCAAGCCAACTGCAAATGCTGATTGCTCAAATTTCAGGACTATACTTTTAAGTACTCGACATTTTTTGTTAGCGCAGATCATTGATTGATCGCCACTTGCAATGGTAGCTGTTCCTGATATCACTCTAATATATCTCAAAATGAGTTAAAAAGGTTAGAAAATGGAGACTTTAGTTCAATGAATTAGAAAAGTGAAACAAACTGGACCATGACTTTGTAGAGGGCCAATATGTCGGTTGGAAGCCATTAAACATCAGGGATAATATTTGTTAAGATAGTTTAGCTTTCAAAATATTTGTTCCTTGGCCAGCTTCCGTGCTATTTGATTATGCTGTAACATGCATGGTTTCTATATTATGCTTATAGGTGATATCGTGAAATACCTCTTTCATCAGTATGGAAATGGTAGAAACCCCTCAACGGGACTTTTAGGAAGGTAACTGGACGTCTTAATCTTTTTTTGGTTATTGAGATTATTATAGTTTTTTTGGGAGAACAAGTTTGAAAGTTGTTTGACTTGTTATTTTATACATATTAAATTTGTCTTAAAAAGGTTTAAGCCAGATATGCATGGATAATTTTTGTAGAAGCAATACGGGCAATCAATGGTGTTCTTTATTACCGGTACTAATCTGATCTTACCAACACTAATTCCAAACGCCGTAGTTAAGCAGGTTTGAGATAGAGTAGTGCTAACTTGGGAAGTATGGACCCCCTAATAACATGCAAAATCATTCTAGCTGTACTATCTGCAGCGTTCTTCCTTTTCTCTCTCTTTTAATTGTTTTTTTTCTTAAATTTTTTTTTCTGGTGTTGTGTACGTAGCATTGTTGAAATGAATTAAACGTTTCCCAGCTGAAGAGATTTCTATATGGCTATTTTTAGCTTTAAAAAAGAAACAGTGTCGTAAACCCATATTGGTTTTCACAATACTTTACATGCATTAGAAAGAGAGTTTTCGGATATCACGGATGTTGTGGTCTGCGGTGTGCATATCTTTTCGTATGGAAAGCCCATGTTGGCTCTTTTACCTTCATGATCCAAATATTTGTTTTATGTAGTACGTTGGTTACGGGGTGGGTGCCAACGATTCTTAGGGCTGGCAGAGGAATGACATTGTGGGAAAAGGCCTCGACAGACCCACCGCCAAAAAAGCTGGAACTTTTCTCATACGAAAACAATCCGGTATGCTGATGAGATATCCTCCCTATATTACATATATTACATATGCCTGTGGCGTGTATATCTCTCCTTTTCAATTTCATCCATAGCCTCTGTAAATTTACCGTAGCTATAATTCATTATTGTAATTTTAAAGATTAGGCTTCGGAGGTAACCCATCATTAGCAGCTAAATTAATGTTTTTTTTTTCTTCTCTGTCATGTTGCTTAGCCTAGTGGTCTCTTATTGGTAGTTAGGGTCCGTTAGGTTGGAAGTTTGCTACTATATAGTAGTTGGTTTGGGTTAGTACTGTATTAATACCCCTCAAATATGCTGAGTACGATACCTTCCATTCTCAAACTGCAGGATTGGATTGCAGTATCTGTATATATTACTTTTCCAACCTTTTTATACTCTGGGTATATTTGGTTGAAGAATGTCAATGGATCAACGAATGCTAACATATTGAGATTATAAACTCTAGTATCATAGTATTTTGTTAGACTTAAGTTTTGATGTATTGAGGTAAAATAAATATTGCAAAACTTTGCAGTATGCTCGAATTGTGCGCGAGGCATTATGTGAGTTGGAGCTTCCTTACATCCTTCATAACGTGGGAGAAGGATCTCTACGGACAAAGTTACTTCTTGACGTTTCCGGATCAAAAGAGGTTCGCTACTAACTACATAACCCAAATTACTATTTACTATGATAATTATGATTTTTGTTTCAATGAATTTGGGATTTTTGTACGGATGACTTCTTGGAGGGCCCAAGTGAGATCTCTCACCTATTGAAAACATAAGTCTTTTGGCCTCTTGCTTACGTATCACTGGGTGAAATTACCAAAACAACCAAAATACACGTGTAATGGCGAAGATCTCACTCTCGTTTCTTGCTTCTTGCTCCTTCATCTCACTTCTCCATCTTCTTCTTCTTAATTAGCTTCTTCTATGGTCAGAAATCTTTCTTGCTACTCTATTATCGCTCTCGCAACTCGATTCTCACTCTCGCTCCTCAGTTTTTTCTTAAAAAAAATTGAAGATTGAGCTATTTGCAGAAGAATTCACAAAATCGGAAGAAGAATGAAAAAGAAAAAGCGATTAGACCATCCAATGGAAGGTCCTAACTATGGCTTCCGGTCTGAAATCAACAAAGATTAGTGGATTTGGATTTTTAGAAAAGAAAAAATTGCAAATCTAGAATCGATGAGCACGAATCGAGAAGCGGAGGCCAAACATGCATTTTTGGTCCATTTAGTAATTTCACCCAACAATGACATAAGCAAGAGGTAAACAAAATTTACAATTTCAAAAAGTGGGTTAGATCTCATTTGGGCCTAAAAATAAGCCATCGGTGTTGATTTCCTAATGACTTTCTGCATGCTCTTGAGGTCATGTTGTTTACCTCATCATTTATATGTATATGGAAAATTGCGTGGATAAGAGTATTAGTGTATGTGACTCACATTCCTAATCGGCTAATCCTACATGTGGAGAATTTGCCTAGAATTAGAGCACGTGCCTGTGCACATGATGAGGAAGGTAATATTCTTTCCCATGTGTGGTCAAAATTGCATGAATGTCGACCTCATGAAGGTTATATTATTTCCTATGTGCTGTGAGTTGCAAGGTTAAAAATTTATCCACTCGAAATTGGAGTTGAGATTAACCCAACTTCAAATAGTCTATAGAGTCTATTCCCAAGTGAGTGTTTCATTCACCTCTTCATTGACAACCATCCCTTTTTCCATATCTTTCAAAAACCCCAACTTAAAAATAGTCTTCCAACTTGCAACTTAATTAAAATATTCTAGCTTCCTCCTTGTACCCTGTTCCAATTTTATTAAGCTTCTTAAAAGCCCTTTCCTTCCGAATATCTTTGTTATAGTCCAACCAAACTTCAATTTTTTATTCACCTTGTTGATATCAAAAATCGTACAAACGGTAAATTTGTATTGTCAAAGAAGAATGACCCCTAAGCCCTGCAAAACAAGCAACTCTGAACACTAGTGTGGTGTTGAACCACGTACACTCCGATGCTCAAGTTAGGACTAGGTTTGTAAAATGGCTCAATCGATAAAAAATAAGTTTGTATTTTGGCGTACCTTTCTTCAGCCGTAGCTCAATGATTATATAGGCCAATCATTTCATAATCGAAACTTGGATGACCTTTCTACTTTTGAGTGACCTCTGGACTTCTGATCAACTTTTACCCACCCAAGCTATCGTTAGAGTCATTACTCATCCAAGCCATCAATGTGCTCGACTCTTGGAAAACCCTCTGATGTTCGATTAACGATTATTAATATATCATAAGTTTATTTATAGCTTGGTTACGTAAACGTAAACTAAGATCTGATTAATCTCTCTAAAATGGGTTTACCAATACAACTGCATGGCTAAGTTATGCAAAAATCATCTCATAATACACTTACATGCATGGTCATGCAAAAATTATCTCATAACACTTAGGGGTTGTTTGGAGAGTTGAAATGTAATCAGATTACTGGGAATCTGAGAGGTGCTGGGATGCGTGAAGAATTGAGGACGAAACGAAAATGAGAACGTGAAGCATCAAAACAGTGGGAAATAGGGTTGGGTTGAAAATTGTGAGAACGAAATGAGTTTATTATTACAAATCGAGCCTAAAACGTTCAATCCAAACGTAGATTTCAGATTATATTACAATCCAAATCCATCTCATTACTGTCCCCCAAATAATCCTTAAATGCATGGCCATGCAAGAATTGCTCCCATTCACGTGCATGGCCAAGGGCATGCAATATTATTTGACTCAAATGGGCCATTTGAGATTATCTTAATCCTTCGTCGACCCCTTTACCACATTTGCTTGCTGACCCAATTCCCAACGTGAGGTCGACATTGCTATTCTCCCATGTCAACCCCACATGGGGTCGGTTCTTGTATCTCAGTGGGTTGGCAAATTGTCGACCCCTCCCTCTTATTTATTTATTTTTTTATATTTTTTCATATATATTCCAATTCTTGCTTCTAAACTTATGTTTAACTGTGCACCACCTTAAACTCTCAAATGGTTAAAGCCTATTTTGAACCTTGAAACTTTTGGGGTTGGCAGTTACCAACCTCTACTTTTTAGCTCGACCACCACTCAATGGGCTTGGCCATCCGCTCTTCTTAGCTTAAATGAGTTGAGCTCACTTAGGTCGTTCTCCGAACTTTATGGTGTCAATTTTTACTTGCCTGCTTGAATTTAGAGTTTTCTTGGTTGATATAGGACTCCCAATAACTATTGGTTATTGACTCTCAATAACTATTGGCTATTTTTGCCATTATTTTTTTATCTTAATTTAACCATGTCCAAATTTATCCTCTACAGTTGCCCCTCTCGAGCTGGGCTTGTTTAGTTTTCAATCAGAGCTTAGTTCGAGAGCTCTTTCTCAAACTTCTAAAGCCTCCGTTGTTTCGAGTTCTACCTTAGTAATTTCATTGTTGCTTGTGCCAAGTTTCCTTATAATAAAGGTCTTAGCTTGACACTCCATTACCACATTTCACCTTTCAATCTTCATCCATCCCTCTTAAGGTAAGCTTTTAATTTTAGAGTCAGATTTTGTTCCCAACCAAAGGCCATAAAATCGCATTAGAAGGGGACGGGGGTTATGTAACAAAAAGTTAGCTCCCCAAGTTCCTTTCTCAATTCCACTAACTACAAATATTTTGAATTCTCTTAGAAAGAAATTCAAGATCCTCAACTCTATTCAGATGAGAATCCTTTCCTTAGATATGAGGAGCCTTCTGACCCACCTTTGGGTGAAGTGAATTTTTATCATTTAATGTTTAATTATGGAGTTAGACTCTCTTTCTACCCTTTTATCCAACAATTTTTAGCTTATGTAAACGTAACTCCATTTCAATTATTTCCCAATTGCTCTTAGGTTGCTATGTTCTCTGGCTCCATTAGAGAATTCAAATCCCATTTCAAAGGGGAGGAATTTTTGTCCCTCCATATACTCGAGAAAATAAAATGGCATAACAACACATAAGATCCTAATAAAGACCCTATATTACGTTTATGTTCAATTTTTTCATTTTTTTACAAAAATGTCCAAATGGACTTCTTAATTACACAAATATTAGGGCTCATTTACCTTTGTGTATACTTACAATTAGTTACACGAATTTCAAAAAAGAAAACTAAAAAATCCCTTGATTCATGCGCAATCTTTAATTAAATCTATTTTTTTTTAATTTTTCCTCCTTTTCCTTTTTGTGAACCAATTTTTTTTCTTTTACTGTTATATATATACTTCAATTTTTTTGGAGTTTTTATAGTATTTTAGATATATATTGTTATATATGTATTCGTTTATTTGATATATACGTTATATATAACGTTGATCCATCCGTGATTTATGTACCATGGTATATTAATTTTGAATTATATTTCTGTTAGGGAGCTGTTGCTATATTTTGATTTATTAGAATTTCTAACTATTTAAATGATATATACGATGATATAAATAAAGTTTATGATATATACTGTGATTTATGTTAGTCAATTTGTGATTGATATATTGTGGGGGTATATTTCATATATTGGTTAGATTATTTTTAAATACCTAATACAATGTTCTAAGGTATATTTAAAATATAACTATAAACCCGAAAAACAAAGAAGCAAAAAATGCTTAAAGTCACATTAATTGCAAATGAAAAAAAAATACAACTAATTAATAATCTATAGTAAATTCACATTCTCTCTCACCCACTAATTAATACAAAGAAGAAAATGGTAGTTGGATTAGATACATCCATACGCCTGGGCTGATCATCGGTCGGGTGGCTTAAAAGATGTTCCACTTCCGCTTCTCTTCTCGTTCAATTAACGCTGCCTCTTACTTTCTCCATATTCCCGTTTCTACTTATTATTACTTCTCTATTTTTCTCATTAAAAACATCCATTTATTTTGTTTTCCAACTTGTTTTCTTCGAAATCGATTTTCCAGTCATGCAACCAATTGCCTTTTCTTGTTTTTTGTTTTTTTTTTGGGTAGAAATCACTGCCAAGAGCCAACTACCTATTAATATCCTTCCCCAATTTCTTTTAATGTGTTCATATTTACCTTCCTCTTCTTCCAACGATTTGAACACAACCCTTCCGAGGCCCCGTTCACACGCTAATTCGCATTTGATTCTCACTTCTGTCTTCCTCATTCATCTTTCTTAATCGGTTAATTGTCCAAGTTCCTCCCAGCATCAGTGGAGGATTTTTTAGGATTTTATGCAAAATTGCGATTGCCTGGTCATAAAAATTCCCACCAAGAGAGAGAATATAGACATAAATTTTTCATACATCGTATTAGAGAAAACATAACGATAAATGCCTTCAATTGAAACTAAACTTAAACTTCATTAGATAATCATTTTGTTTTTTAACTTTGAAAATTAAGCATATAAACACTACTTATCGACTATAACATTTTCTCAAAAGAAAAAGTAGCCTTCTATTTCCAACCATTGAACGCCACCTAAACTATGTGAAAAAACAAAGACTTCTATCCATTCCGTCCCCGATTCCTCACTCATTCCAACCTCCCTCAAATCCTGATTATATTCCAGCCTCTCAAGTAAACATTTCCCACCCATGAGAGATAATGGAAAATGAAGCAAAAGAGGTGATGTGTTTCTTCTTTATTCACATTGTGTTTTTTTCTTATGAGGTTTACACAAGGCTGATCATATTCAGATCAGTCTGGATGGATCAATCAATGTAATCCTTGGATTGCATTGGATTTTCTTGTTAGTCTTACGTTGTATGAGTTATGTGCTATATTTGTGTCAATAGTTAATACATGTGCTCATTGACTATTTACTTCCATTGTCTAAATATCAGGTACCCTACTTTGTCGATCCCAATACTGGTATTCAAACAGGCAAGTACAAGCAGATTTTATCTCATATATTCCAGACGTATTCTGCAGCTACTCTATAGATTTGGTATTTTATAACATTAATGTCCTGCTTGTGAAGCAAGATAAGTCTTTGATCATAAGATAAGTTTAGATCAATCTTAGATGGATCAATCAAATGTAATCCTTGGTATGGAGACTTCCATTAGATTTTCTTGTTGTATGATTGATGTACTATATTTGTTTTAATAGTATATACATAGTGCTTCCCTAGTCTACACCACTAATTATCGAAATCATAAATATCAAGTACCTTAGTTTATCAATCCCAATATTGGTATTAAGATTGGCAA

mRNA sequence

TTGGGCTTTGAAGCCAAGCAGGCGAGGTTTCAGTTTGAAGGTTAACCAATTAGAATGTCATCGTTTTCTTTCACTACCCCATATTATTCCTCTCTGCACTGCTCTACGATCGTTCATTCCGAACAGAGCTTCAACCAAGCAGCCACTTCCGTCCTTTTGAATCGAAACCTCTCCCCGATTCCTGCAATTTTTTGTAGAATCTCTTCACGCAGACGCAGATTTCACGCGAACTCTGTTCGCTCAGGCGCTGAAACTGAAGAATCTCGAACTCAGCATTCGCCCGAAAGTAATGCAGTTTCGAGCAATGGAAGCAAGCTTTCTACAAGTTTTCTATCTTATCTCTGCCCCTTGCTCAAGCTTTTCGCTGTAGCCACATCTTCCTTATCTACATTGGCAAGGCTTCCATGGGGCTCAAGAACATTTTCAGATTATTCTCACAGCAATAGGAATATTAATTTGGAACCTCTGTTGCCTTTGCAACTCTATGAATTTGAAGCATGCCCCTTTTGCAGGAGGGTTCGAGAGGCCTTGACTGAACTGGATCTTTTAGTGGAGGTTTATCCTTGTCCTAAGGGTTCCATTAGACACAGGAACATAGTTAAGAAATGTGGTGGCAAAGAGCAGTACGTGGTTCTTTCTGTTTAGTCCATATTTCAGTTTATTCAAAGATCATTTTGAGGTGCCATAAAGAATTAATGAATTCTGATAAAAGGTTTCCTTTTCTTATTGATCCAAATACCAGTACTTCACTGTATGAAAGTGGTGATATCGTGAAATACCTCTTTCATCAGTATGGAAATGGTAGAAACCCCTCAACGGGACTTTTAGGAAGTACGTTGGTTACGGGGTGGGTGCCAACGATTCTTAGGGCTGGCAGAGGAATGACATTGTGGGAAAAGGCCTCGACAGACCCACCGCCAAAAAAGCTGGAACTTTTCTCATACGAAAACAATCCGTATGCTCGAATTGTGCGCGAGGCATTATGTGAGTTGGAGCTTCCTTACATCCTTCATAACGTGGGAGAAGGATCTCTACGGACAAAGTTACTTCTTGACGTTTCCGGATCAAAAGAGGTACCCTACTTTGTCGATCCCAATACTGGTATTCAAACAGGCAAGTACAAGCAGATTTTATCTCATATATTCCAGACGTATTCTGCAGCTACTCTATAGATTTGGTATTTTATAACATTAATGTCCTGCTTGTGAAGCAAGATAAGTCTTTGATCATAAGATAAGTTTAGATCAATCTTAGATGGATCAATCAAATGTAATCCTTGGTATGGAGACTTCCATTAGATTTTCTTGTTGTATGATTGATGTACTATATTTGTTTTAATAGTATATACATAGTGCTTCCCTAGTCTACACCACTAATTATCGAAATCATAAATATCAAGTACCTTAGTTTATCAATCCCAATATTGGTATTAAGATTGGCAA

Coding sequence (CDS)

ATGTCATCGTTTTCTTTCACTACCCCATATTATTCCTCTCTGCACTGCTCTACGATCGTTCATTCCGAACAGAGCTTCAACCAAGCAGCCACTTCCGTCCTTTTGAATCGAAACCTCTCCCCGATTCCTGCAATTTTTTGTAGAATCTCTTCACGCAGACGCAGATTTCACGCGAACTCTGTTCGCTCAGGCGCTGAAACTGAAGAATCTCGAACTCAGCATTCGCCCGAAAGTAATGCAGTTTCGAGCAATGGAAGCAAGCTTTCTACAAGTTTTCTATCTTATCTCTGCCCCTTGCTCAAGCTTTTCGCTGTAGCCACATCTTCCTTATCTACATTGGCAAGGCTTCCATGGGGCTCAAGAACATTTTCAGATTATTCTCACAGCAATAGGAATATTAATTTGGAACCTCTGTTGCCTTTGCAACTCTATGAATTTGAAGCATGCCCCTTTTGCAGGAGGGTTCGAGAGGCCTTGACTGAACTGGATCTTTTAGTGGAGGTTTATCCTTGTCCTAAGGGTTCCATTAGACACAGGAACATAGTTAAGAAATGTGGTGGCAAAGAGCAGTACGTGGTTCTTTCTGTTTAG

Protein sequence

MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFAVATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVLSV

Homology

[Close]

BLAST of Lsi11G010120 vs. TrEMBL
Match: A0A0A0LQK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G396230 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-77
Identity = 162/207 (78.26%), Postives = 171/207 (82.61%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPYYSSLHCS+I+HSEQSFNQA TSVL NRNL PI A   RISS RRRFHA+S
Sbjct: 1   MTSFYFATPYYSSLHCSSILHSEQSFNQAITSVLFNRNLFPISAKKFRISSCRRRFHADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA-------------VAT 120
           VRS AETEESRT+ S ESN V SNGS LSTSFLSYLCPLLKLFA             VAT
Sbjct: 61  VRSCAETEESRTRISAESNEVPSNGSTLSTSFLSYLCPLLKLFAGGDPSRERNFTLEVAT 120

Query: 121 SSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVE 180
           SSLS+LARLPWGSRT SD SHSNRNI+LE LLPLQLYEFEACPFCRRVREALTELDL VE
Sbjct: 121 SSLSSLARLPWGSRTLSDNSHSNRNIDLESLLPLQLYEFEACPFCRRVREALTELDLSVE 180

Query: 181 VYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           VYPCPKGSIRHR+IVKK GGKEQ+  L
Sbjct: 181 VYPCPKGSIRHRDIVKKYGGKEQFPFL 207

[Close]

BLAST of Lsi11G010120 vs. TrEMBL
Match: M5XSZ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010215mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 96/157 (61.15%), Postives = 106/157 (67.52%), Query Frame = 1


Query: 51  SRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA------ 110
           S R  FHANS  S A+T E  TQ S E+ AVSSNG   STSFLS LCPLLKLF+      
Sbjct: 59  SCRNIFHANSADSDADTNELETQLSRENGAVSSNGGNPSTSFLSVLCPLLKLFSGGDPSQ 118

Query: 111 -------VATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVRE 170
                  VATSSLST AR PWGSR+ S          L+P + LQL+EFEACPFCRRVRE
Sbjct: 119 ERNFTLEVATSSLSTFARFPWGSRSLSQNLDRQDITTLDPPMHLQLFEFEACPFCRRVRE 178

Query: 171 ALTELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           ALTELDL  EVYPCPKGS+RHR +VK  GGKEQ+  L
Sbjct: 179 ALTELDLSAEVYPCPKGSVRHREMVKGFGGKEQFPFL 215

[Close]

BLAST of Lsi11G010120 vs. TrEMBL
Match: U5FXC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10260g PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35
Identity = 90/157 (57.32%), Postives = 108/157 (68.79%), Query Frame = 1


Query: 51  SRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA------ 110
           S R+RFH  S  S  +T ES +  S  S++ SS+    + SFLS+LCPLLKLF+      
Sbjct: 54  SLRKRFHVKSPDS--DTTESVSASSDGSSSSSSS----TNSFLSFLCPLLKLFSGGDPSQ 113

Query: 111 -------VATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVRE 170
                  VATSSLSTLARLPWGSR+ S+  ++      +P  PLQLYEFEACPFCRRVRE
Sbjct: 114 ERNYTLEVATSSLSTLARLPWGSRSLSENLNNQETTISDPPKPLQLYEFEACPFCRRVRE 173

Query: 171 ALTELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           A+TELDL  EVYPCPKGS+RHR IV+K GGKEQ+  L
Sbjct: 174 AMTELDLSTEVYPCPKGSVRHREIVRKIGGKEQFPFL 204

[Close]

BLAST of Lsi11G010120 vs. TrEMBL
Match: D7TLI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06900 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-34
Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 51  SRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKL--STSFLSYLCPLLKLFA---- 110
           S+  RF A S    A+   S+     E +AVSS G+    STSFLS LCPLLKLF+    
Sbjct: 52  SQGNRFRAKSADPDADPGFSQ-----EEDAVSSGGTGTTPSTSFLSVLCPLLKLFSAGDP 111

Query: 111 ---------VATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRV 170
                    VATSSLSTL+R PWGSR+ SD S S     ++P   LQL+EFEACPFCRRV
Sbjct: 112 SQERNYLLEVATSSLSTLSRFPWGSRSLSDSSQSEEATTVDPPTRLQLFEFEACPFCRRV 171

Query: 171 REALTELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           REA+TELDL VEVYPCPKGS+RHR +V++ GGKEQ+  L
Sbjct: 172 REAITELDLSVEVYPCPKGSVRHREMVRRFGGKEQFPFL 205

[Close]

BLAST of Lsi11G010120 vs. TrEMBL
Match: A0A067DNL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019273mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.8e-33
Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 51  SRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA------ 110
           S R R HA S    A T +       ++++ S +GS  STSFLS LCPLLKLF+      
Sbjct: 38  SGRNRLHAKSADPDAGTSQVG-----DASSESKSGSA-STSFLSVLCPLLKLFSGGDPSR 97

Query: 111 -------VATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVRE 170
                  VATSSLSTLARLPWGSR+ S+ S +    N +    LQL+EFEACPFCRRVRE
Sbjct: 98  ERNDTLEVATSSLSTLARLPWGSRSLSEGSDTQEISNSDSPTRLQLFEFEACPFCRRVRE 157

Query: 171 ALTELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           A+TELDL VEV+PCPKGSIRHR +V++ GGKEQ+  L
Sbjct: 158 AITELDLSVEVFPCPKGSIRHREMVRRLGGKEQFPFL 188

[Close]

BLAST of Lsi11G010120 vs. TAIR10
Match: AT4G10000.1 (AT4G10000.1 Thioredoxin family protein)

HSP 1 Score: 144.8 bits (364), Expect = 5.5e-35
Identity = 81/155 (52.26%), Postives = 102/155 (65.81%), Query Frame = 1


Query: 53  RRRFHANSVRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA-------- 112
           RRR +  S  S  + EE          A   + S  ++SFLS+LCPLLK+F+        
Sbjct: 41  RRRLYVKSSNSEGKKEE----------AAQKSSSNNTSSFLSFLCPLLKVFSGGDPSQQR 100

Query: 113 -----VATSSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREAL 172
                VATSSL+++ARLPWGSR  S  S  N++++  P L LQL+EFEACPFCRRVREA+
Sbjct: 101 NHALEVATSSLASVARLPWGSRV-STGSIDNQDVSSNPPLRLQLFEFEACPFCRRVREAM 160

Query: 173 TELDLLVEVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           TELDL VEVYPCPKGSIRHR +V++ GGKE +  L
Sbjct: 161 TELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFL 184

[Close]

BLAST of Lsi11G010120 vs. TAIR10
Match: AT5G03880.1 (AT5G03880.1 Thioredoxin family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = 1


Query: 34  LLNRNLSPIPAIFCRISSRRRRFHANSVRSGAETEESRTQHSPESNAVSSNGSK------ 93
           +L  N+ P P I   +SS  RR   +S+R+    + S ++ S ES +VS+  S       
Sbjct: 4   ILVNNILPQPPILRSLSSSSRR---SSIRTLVMVKASSSEPS-ESVSVSTKTSDDTGAVV 63

Query: 94  LSTSFLSYLCPLLKLFAVATSSLSTLARLP------WGSRTF-SDYSHS----------- 153
           + T+   +  P  K FAV +  L  +          +G+  F S YS S           
Sbjct: 64  VFTAPPGFKPPEPKRFAVKSGKLFDVLGAAIGLFFRFGTGVFVSGYSASFVSKEEIPADQ 123

Query: 154 ------------NRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVEVYPCPKGSIR 192
                          +   P  P+++YEFE CPFCR+VRE +  LDL +  YPCP+GS  
Sbjct: 124 YALRLGGITVKETAKVGPRPEKPIEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPN 183

[Close]

BLAST of Lsi11G010120 vs. NCBI nr
Match: gi|778672828|ref|XP_011649877.1| (PREDICTED: uncharacterized protein LOC101202752 isoform X2 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-80
Identity = 162/194 (83.51%), Postives = 171/194 (88.14%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPYYSSLHCS+I+HSEQSFNQA TSVL NRNL PI A   RISS RRRFHA+S
Sbjct: 1   MTSFYFATPYYSSLHCSSILHSEQSFNQAITSVLFNRNLFPISAKKFRISSCRRRFHADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFAVATSSLSTLARLPWGS 120
           VRS AETEESRT+ S ESN V SNGS LSTSFLSYLCPLLKLFAVATSSLS+LARLPWGS
Sbjct: 61  VRSCAETEESRTRISAESNEVPSNGSTLSTSFLSYLCPLLKLFAVATSSLSSLARLPWGS 120

Query: 121 RTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVEVYPCPKGSIRHRN 180
           RT SD SHSNRNI+LE LLPLQLYEFEACPFCRRVREALTELDL VEVYPCPKGSIRHR+
Sbjct: 121 RTLSDNSHSNRNIDLESLLPLQLYEFEACPFCRRVREALTELDLSVEVYPCPKGSIRHRD 180

Query: 181 IVKKCGGKEQYVVL 195
           IVKK GGKEQ+  L
Sbjct: 181 IVKKYGGKEQFPFL 194

[Close]

BLAST of Lsi11G010120 vs. NCBI nr
Match: gi|449441798|ref|XP_004138669.1| (PREDICTED: uncharacterized protein LOC101202752 isoform X1 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 4.2e-77
Identity = 162/207 (78.26%), Postives = 171/207 (82.61%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPYYSSLHCS+I+HSEQSFNQA TSVL NRNL PI A   RISS RRRFHA+S
Sbjct: 1   MTSFYFATPYYSSLHCSSILHSEQSFNQAITSVLFNRNLFPISAKKFRISSCRRRFHADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA-------------VAT 120
           VRS AETEESRT+ S ESN V SNGS LSTSFLSYLCPLLKLFA             VAT
Sbjct: 61  VRSCAETEESRTRISAESNEVPSNGSTLSTSFLSYLCPLLKLFAGGDPSRERNFTLEVAT 120

Query: 121 SSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVE 180
           SSLS+LARLPWGSRT SD SHSNRNI+LE LLPLQLYEFEACPFCRRVREALTELDL VE
Sbjct: 121 SSLSSLARLPWGSRTLSDNSHSNRNIDLESLLPLQLYEFEACPFCRRVREALTELDLSVE 180

Query: 181 VYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           VYPCPKGSIRHR+IVKK GGKEQ+  L
Sbjct: 181 VYPCPKGSIRHRDIVKKYGGKEQFPFL 207

[Close]

BLAST of Lsi11G010120 vs. NCBI nr
Match: gi|659081106|ref|XP_008441155.1| (PREDICTED: uncharacterized protein LOC103485378 isoform X2 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-76
Identity = 160/207 (77.29%), Postives = 170/207 (82.13%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPY+SSLHCS+++HSEQSFNQAATSVL NRNL P  A   +ISSRRRRF A+S
Sbjct: 1   MTSFYFATPYHSSLHCSSVLHSEQSFNQAATSVLFNRNLFPNSAKKFKISSRRRRFCADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA-------------VAT 120
           VRS  ETEESRTQ SPES  V SNGS LSTSFLSYLCPLLKLFA             VAT
Sbjct: 61  VRSCVETEESRTQISPESYEVPSNGSTLSTSFLSYLCPLLKLFAGGDPSRERNFTLEVAT 120

Query: 121 SSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVE 180
           SSLS+LARLPWGSRT SD SHSNRNI+LE LLPLQLYEFEACPFCRRVREALTELDL VE
Sbjct: 121 SSLSSLARLPWGSRTLSDNSHSNRNIDLESLLPLQLYEFEACPFCRRVREALTELDLSVE 180

Query: 181 VYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           VYPCPKGSIRHRNIVKK GGKEQ+  L
Sbjct: 181 VYPCPKGSIRHRNIVKKYGGKEQFPFL 207

[Close]

BLAST of Lsi11G010120 vs. NCBI nr
Match: gi|659081104|ref|XP_008441154.1| (PREDICTED: uncharacterized protein LOC103485378 isoform X1 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 160/208 (76.92%), Postives = 170/208 (81.73%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPY+SSLHCS+++HSEQSFNQAATSVL NRNL P  A   +ISSRRRRF A+S
Sbjct: 1   MTSFYFATPYHSSLHCSSVLHSEQSFNQAATSVLFNRNLFPNSAKKFKISSRRRRFCADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFA-------------VAT 120
           VRS  ETEESRTQ SPES  V SNGS LSTSFLSYLCPLLKLFA             VAT
Sbjct: 61  VRSCVETEESRTQISPESYEVPSNGSTLSTSFLSYLCPLLKLFAGGDPSRERNFTLEVAT 120

Query: 121 SSLSTLARLPWGSRTFSDYSHSNRNINLEPLLPLQLYEF-EACPFCRRVREALTELDLLV 180
           SSLS+LARLPWGSRT SD SHSNRNI+LE LLPLQLYEF EACPFCRRVREALTELDL V
Sbjct: 121 SSLSSLARLPWGSRTLSDNSHSNRNIDLESLLPLQLYEFAEACPFCRRVREALTELDLSV 180

Query: 181 EVYPCPKGSIRHRNIVKKCGGKEQYVVL 195
           EVYPCPKGSIRHRNIVKK GGKEQ+  L
Sbjct: 181 EVYPCPKGSIRHRNIVKKYGGKEQFPFL 208

[Close]

BLAST of Lsi11G010120 vs. NCBI nr
Match: gi|659081108|ref|XP_008441156.1| (PREDICTED: uncharacterized protein LOC103485378 isoform X3 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 8.5e-54
Identity = 127/194 (65.46%), Postives = 139/194 (71.65%), Query Frame = 1


Query: 1   MSSFSFTTPYYSSLHCSTIVHSEQSFNQAATSVLLNRNLSPIPAIFCRISSRRRRFHANS 60
           M+SF F TPY+SSLHCS+++HSEQSFNQAATSVL NRNL P  A   +ISSRRRRF A+S
Sbjct: 1   MTSFYFATPYHSSLHCSSVLHSEQSFNQAATSVLFNRNLFPNSAKKFKISSRRRRFCADS 60

Query: 61  VRSGAETEESRTQHSPESNAVSSNGSKLSTSFLSYLCPLLKLFAVATSSLSTLARLPWGS 120
           VRS  ETEESRTQ SPES  V SNGS LSTSFLSYLCPLLKLFA+ +           G 
Sbjct: 61  VRSCVETEESRTQISPESYEVPSNGSTLSTSFLSYLCPLLKLFALQSRE--------QGR 120

Query: 121 RTFSDYSHSNRNINLEPLLPLQLYEFEACPFCRRVREALTELDLLVEVYPCPKGSIRHRN 180
           R+F                  + Y  EACPFCRRVREALTELDL VEVYPCPKGSIRHRN
Sbjct: 121 RSFERE---------------EFYFGEACPFCRRVREALTELDLSVEVYPCPKGSIRHRN 171

Query: 181 IVKKCGGKEQYVVL 195
           IVKK GGKEQ+  L
Sbjct: 181 IVKKYGGKEQFPFL 171

The following BLAST results are available for this feature:

BLAST of Lsi11G010120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G010120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQK6_CUCSA	2.9e-77	78.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G396230 PE=4 SV=1	[more]
M5XSZ3_PRUPE	1.1e-39	61.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010215mg PE=4 SV=1	[more]
U5FXC7_POPTR	1.6e-35	57.32	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s10260g PE=4 SV=1	[more]
D7TLI7_VITVI	1.8e-34	55.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06900 PE=4 SV=...	[more]
A0A067DNL0_CITSI	5.8e-33	55.41	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019273mg PE=4 SV=1	[more]

BLAST of Lsi11G010120 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10000.1	5.5e-35	52.26	Thioredoxin family protein	[more]
AT5G03880.1	2.5e-11	31.44	Thioredoxin family protein	[more]

BLAST of Lsi11G010120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778672828\|ref\|XP_011649877.1\|	6.9e-80	83.51	PREDICTED: uncharacterized protein LOC101202752 isoform X2 [Cucumis sativus]	[more]
gi\|449441798\|ref\|XP_004138669.1\|	4.2e-77	78.26	PREDICTED: uncharacterized protein LOC101202752 isoform X1 [Cucumis sativus]	[more]
gi\|659081106\|ref\|XP_008441155.1\|	4.7e-76	77.29	PREDICTED: uncharacterized protein LOC103485378 isoform X2 [Cucumis melo]	[more]
gi\|659081104\|ref\|XP_008441154.1\|	1.1e-74	76.92	PREDICTED: uncharacterized protein LOC103485378 isoform X1 [Cucumis melo]	[more]
gi\|659081108\|ref\|XP_008441156.1\|	8.5e-54	65.46	PREDICTED: uncharacterized protein LOC103485378 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR011767	GLR_AS
IPR004045	Glutathione_S-Trfase_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0008152	metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G010120.1	Lsi11G010120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF13417	GST_N_3	coord: 143..175 score: 8.
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 143..159 scor
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 148..187 score: 5.
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 140..189 score: 3.6
None	No IPR available	PANTHER	PTHR11260	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	coord: 118..191 score: 2.9
None	No IPR available	PANTHER	PTHR11260:SF136	THIOREDOXIN FAMILY PROTEIN	coord: 118..191 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G010120	Csa2G396230	Cucumber (Chinese Long) v2	culsiB101
Lsi11G010120	CSPI02G24570	Wild cucumber (PI 183967)	cpilsiB098
Lsi11G010120	Cucsa.088660	Cucumber (Gy14) v1	cgylsiB097
Lsi11G010120	CmaCh15G000100	Cucurbita maxima (Rimu)	cmalsiB269
Lsi11G010120	CmoCh15G000100	Cucurbita moschata (Rifu)	cmolsiB258
Lsi11G010120	Cla011985	Watermelon (97103) v1	lsiwmB112
Lsi11G010120	MELO3C008080	Melon (DHL92) v3.5.1	lsimeB107
Lsi11G010120	ClCG11G008840	Watermelon (Charleston Gray)	lsiwcgB079
Lsi11G010120	MELO3C008080.2	Melon (DHL92) v3.6.1	lsimedB115
Lsi11G010120	Cla97C11G214900	Watermelon (97103) v2	lsiwmbB081
Lsi11G010120	Bhi04G002102	Wax gourd	lsiwgoB122
Lsi11G010120	Cp4.1LG13g11730	Cucurbita pepo (Zucchini)	cpelsiB139
Lsi11G010120	CsGy2G024330	Cucumber (Gy14) v2	cgyblsiB091
Lsi11G010120	CsaV3_2G033100	Cucumber (Chinese Long) v3	cuclsiB111

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G010120	Cucurbita maxima (Rimu)	cmalsiB092
Lsi11G010120	Cucurbita maxima (Rimu)	cmalsiB637
Lsi11G010120	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G010120	Cucurbita maxima (Rimu)	cmalsiB784
Lsi11G010120	Cucurbita moschata (Rifu)	cmolsiB089
Lsi11G010120	Cucurbita moschata (Rifu)	cmolsiB624
Lsi11G010120	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G010120	Cucurbita pepo (Zucchini)	cpelsiB322
Lsi11G010120	Wild cucumber (PI 183967)	cpilsiB435
Lsi11G010120	Melon (DHL92) v3.5.1	lsimeB094
Lsi11G010120	Melon (DHL92) v3.5.1	lsimeB120
Lsi11G010120	Watermelon (Charleston Gray)	lsiwcgB090
Lsi11G010120	Melon (DHL92) v3.6.1	lsimedB127
Lsi11G010120	Silver-seed gourd	carlsiB014
Lsi11G010120	Silver-seed gourd	carlsiB186
Lsi11G010120	Cucumber (Chinese Long) v3	cuclsiB458
Lsi11G010120	Bottle gourd (USVL1VR-Ls)	lsilsiB047