Lsi11G010110 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G010110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Queuine tRNA-ribosyltransferase, putative
Location	chr11 : 17170243 .. 17177308 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTCCATATATAAAATGCGTCCAAGATTTGAAACAGATTTGAGCGCCACAAGCATCTTTTGTCAGTTTAACGACAGAATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTGTAAGTATTCAACACTATCCATATTCCTTCACCTCCATTCGCGTTCATTCTGTTTCTTAATTGGACCGCCTCCCTCTACTTTGTTTTGTTGCATGGATTTTCTTTTCATTTATTCGCTCTCGTATTTCTTAAGATTGTTCGCGGACGATTCCAGGACTAGAAACTATTCTAGAATTATGAGAATACGACAGGCTAAAGCATGAGATAAGAAGTTCGTACTTAGTAATATGTCATGGTGGTTGCTGCTGATACTACTATGTGCAGGAAAGGAGCGTGTGATCATGGAAGTTGAAATGATAACTATGTCGTCGTGATTCTTAAATAACTAAACGGCTAATTTACGTTGTTGCGACTTGTGCTCTAGACTCTTCCGAGATAGTTTATCTATGGTTTTTTTTTAATAATCCTTTGTATGCATGAAACGGCAGTCAAGTAATTTATGGAATCCATTACTTTTTTCTGTCATTGGTCCTTGATTCAACATAATTTTTTTACTCTATATGACTTGCGTAATGAAAATTTGGTTCTCTTTACAATTATAAATTGAGTCCAATTTTTGTGCTGGTAGTTGGTACATAAATTGATTCTGAACGTTGTTTCTCGACGTTGGTGGCTGTTTTTCTTTAAACACTTGTGCTTCTGTTACATCTGTCTTGTTTCAGTTAATATTTTCAAGATTCATTCCATCTTGTATAAAAAAATCGGCTGTCCTTCACTGTGTTGTCGAGAAAGAAGTTATATTCATTCCATCGTAATGTTGAAGTTATAATATGAAGATTGTTTTTCTTATCTGATATTGGTTTGTTTTGTTGTTAGTCACATTGACTATTTGATCATTTAAATATTAGCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGGTAATGGAACCCCATTACTCTTTTTCATATCAACTCTTGCTATCCCTTCCTTTATTATTATAAATTCCTTTTGTAATTGTAGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAGTAAGAATGATAGAATATTCCTTTTTTAATATTAGTTGTATCAACATCTTGTCTGGTTTTAAACTCTGCTAGATCTAGATGTCTAATGTTGAGAAATGTCAGCCAATGGGCATCATTTATAAGCATTTGAATAAGCAGTACATAATTGCTCTTTCGTAGTATTCTGTGTTTTAAACATCAACACATGGTTAGGCCCATAGATAGAAAATAAGTTGGGAAAAATAGCAGATTATAAATTGTACTGGGGACTAAAATCTGCCTCTATGTTAGGTCTGTGGAGATCATCTGCGTGTGCAATTCTATATGGAAATTTATAGCGTAATAATGATTAGATAGAGGAAACATCATGGAGGAGCATAGAATGTTGGCCAAAATTTCCAAAGCAAGCTGCTTAAAGGAGGGAAACAAGAATTCTGGCCCCTTTTAAATTGATAGAAATGACATAATTATATCCGATGATGATAGGTGACCATCAGAGATTTTCCAAAATCTGGAGTGATTGGTTGGATAGGCTTTTATTTATATTTTTTAGGAGTAGATTCTCAAATGTGAAAGGGTTAGGGTGCCTAAAGTCTCACTGGATGATATAGCCTATGGGTGAAGTTTTGAGAAAAGGATGGAGCATCTTGAAAAACCTGATTCAATTGTGGTTTCCCATAGTATTTCAGAAGTGGTTGTTAACAAATGCACAGATGAAATCTACATTTTCCTTATCCCGATGGCTTCTAATTCGAGAAGATTCATTCATTCATTTATTTATTTTTATTTTTTTTGTGAGTCATATATAACCGTTGTGTTTAAATTTTAAAACTCATCGATGCAAAGGCAATATGGGAACGTTTTATTTTTTTTGCGAGTCATATGACCGTTGTGTTTAAAACTCATCAATGTAAAGGCAATATGGGAACATTTTATTTTTTTGCGAGTCATATGACCGTTGTGTTTAAAACTCATCAATGCAAAGGCAATATCAATATGGGAACGCTGTCATGACTCATGATAGTATTTGGTTTTTATGTCTAGTTTTGGTCCTTTTTATATTTTTCTTTTCCTAATCATGTCATGAGTGATTTGGAACAAGCAACTTATTATTATAATGAAGACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTCAATTACATGTTTTTTCATATTTAAGGTGAAATAATGGTAATAAGTTCAAGAATCCATAGTTGGAAAACTAGTTTTTGAGTAATATCAATTTCTAGCTTCTAGCAGAATTTCTCTAGACTGCCAAAGTCCTTAATAGTCAGTTTGTAACATGTTTCTTAACACACATTCAAATTATTAGCATAACCAATAAAATTTTGAACAGAATATCAAGATTGACGTTCCTCATGTTTTCTTTTCATAACACCCTTGACCCTATCTAATATGTAAGGAATGATTGTTTTCCCTATGTATTTTGTTCAATTAAATTTCTCATTTCTATCTTAGCTTTTAGCTTGTTCTAATTTCTCAGTTTGAACAAACAATTTTTGTTAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGTAAGGATTTGGCTTCCAGTGTTGTTTGGTTTGTTTTTTGAAGCATTGCCATCCTTTTCTTGCACCAAGAATGTGGATGTTTTGCATGTGTACTAGTTTATGAATTGAACTTTGAAGCTTAATAGTAGCAAGTTAGATTTGTTTGTGTTGTCTTCTCTGTTATCAATTTGTTGGAGCTTGGTCTTGTTTTTTGAGGTTTTTTTCTATTCTCTTGACGTTCATAGTCCTTGATGATTTATTCCATACAAAAACAAAAAGGCAACTGCACTGCGATCTACTCTTTACTTCCAATATCTTTGCTTATTCTCTGTGTCATTTTCCGTCCGTTTCCGTATCTTTTTTTTTTTTTTTTTTCTTTATTTTCTGTGTTCTAAGTAGCTCTATCCAAAGCTGTGTTGCCTGGTCTCCACCTTTATTTTACATTTTTCTCCCATTGAGTTTTTCTTAGCAAAGTATAATAAACCATATCGAACTTTTTTGTTTTGAAAATGAAACGTACTTCTAATAATTCTTTCATTGCTTTCACAGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGGTATAGTTTTTTCAATCTTTTAGGTTGAGTTGCTTGACGAATACATCTTGTTTTGACTTTTGGTTGGATTCTGTGTCCAGCCTATGGAAGCTCAAACTACATATCTTTAATATTTTAATGAAACCTAGACGTTTAAAGGGATGTTGGTTTATGGTTTTAGTAGGCCTAAATTTTTGTAGCTGACTAAGAAGTTTAGGTTTAATCATTTCTGTCACTCTTAATGCACACTTTGTAATTGTAGTTTGAATTCTCAGTTCTCTGGCTACCAGGAAGAGCACGTTTGTCAAAACAATTAAATATCATTGCTGTTGATATATGTAAATATATAGTGTTAACTTTTAAGGTTTCAAAAATGTGTAGTTTGAGTTTCTATAGTCATTGTTACCATAAATATCATTATTGTAAAATACACATCAATTGTAAGCTCGACATCAGAATCAGAGACTATATGACTCAATCTGTGAGGCAACAACCCTGATAAAATGTTGGATGGTCTCTGACCAATTATAGGGTTAACTGGTCAAATAAACTTGGTGTGTCCGCATCCTGTGATGAATCCAAGGTTTCCATTTTACCTTAGGTTCTTGCATCAAACTAAATTTATTTACGGATCTTGCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCGTATGTTACTCATTTTGAATTAGTTTGTTTTTCTATGATTGTATCTCCATAAATAGTTCCATTACCGTATTGCAGTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGGTAAGTTTCAAATACTTCAGATCTCTATTATTGCTTGAGTATTGATTTGCCAATATTTAGTCCCTTTATTTTCTAGACCCTAATTTTCATTCTGTATGTATTTGCCAAAAATGGTTTATTTCTTTTGTCAGGAAAGACACATCACCAATTCTTGAGGGGTGTAATTGCTATACTTGTCTGAATCATACGAAGGCTTATATAAATCACTTACTAAATGTCCATGAAATGCTGGCTCAGATACTGCTGGAGTTGTATGAACATTTCACTACTTGAATTGTATATTTGGTCGTCTCAATTTTTATTCTCACAGTAATTATTCTCACTACATTGCAGACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGACCAAGTAATTTTCATGTAATGTTTTATTAAATTATGTTATGAACTGATCCATAATATTAACAGCAAGTGTGTACCTTAGCTTATTAAAAAAGAGAATACTTGTGTGGTTTTCTTGTACAAAAATACCTTTACGACTGAAAAAGCATGTTTAACTTATGTTGTGTTAGCGTTGCTTCACAGGCAAGACATTAATGTTATCAGAAACCAAAACTATAGAATATATTGCATAATACGTTTGGAATATATGAGATAAAATCTGCTTGTAGTTGCCAATCTTAATACCAATATTGGGATTGATAAACTAAGGTACTTGATATTTATGATTTCGATAATTAGTGGTGTAGACTAGGGAAGCACTATGTATATACTATTAAAACAAATATAGTACATCAATCATACAACAAGAAAATCTAATGGAAGTCTCCATACCAAGGATTACATTTGATTGATCCATCTAAGATTGATCTAAACTTATCTTATGATCAAAGACTTATCTTGCTTCACAAGCAGGACATTAATGTTATAAAATACCAAATCTATAGAGTAGCTGCAGAATACGTCTGGAATATATGAGATAAAATCTGCTTGTACTTGCCTGTTTGAATACCAGTATTGGGATCGACAAAGTAGGGTACCTGATATTTAGACAATGGAAGTAAATAGTCAATGAGCACATGTATTAACTATTGACACAAATATAGCACATAACTCATACAACGTAAGACTAACAAGAAAATCCAATGCAATCCAAGGATTACATTGATTGATCCATCCAGACTGATCTGAATATGATCAGCCTTGTGTAAACCTCATAAGAAAAAAACACAATGTGAATAAAGAAGAAACACATCACCTCTTTTGCTTCATTTTCCATTATCTCTCATGGGTGGGAAATGTTTACTTGAGAGGCTGGAATATAATCAGGATTTGAGGGAGGTTGGAATGAGTGAGGAATCGGGGACGGAATGGATAGAAGTCTTTGTTTTTTCACATAGTTTAGGTGGCGTTCAATGGTTGGAAATAGAAGGCTACTTTTTCTTTTGAGAAAATGTTATAGTCGATAAGTAGTGTTTATATGCTTAATTTTCAAAGTTAAAAAACAAAATGATTATCTAATGAAGTTTAAGTTTAGTTTCAATTGAAGGCATTTATCGTTATGTTTTCTCTAATACGATGTATGAAAAATTTATGTCTATATTCTCTCTCTTGGTGGGAATTTTTATGACCAGGCAATCGCAATTTTGCATAAAATCCTAAAAAATCCTCCACTGATGCTGGGAGGAACTTGGACAATTAACCGATTAAGAAAGATGAATGAGGAAGACAGAAGTGAGAATCAAATGCGAATTAGCGTGTGAACGGGGCCTCGGAAGGGTTGTGTTCAAATCGTTGGAAGAAGAGGAAGGTAAATATGAACACATTAAAAGAAATTGGGGAAGGATATTAATAGGTAGTTGGCTCTTGGCAGTGATTTCTACCCAAAAAAAAAACAAAAAACAAGAAAAGGCAATTGGTTGCATGACTGGAAAATCGATTTCGAAGAAAACAAGTTGGAAAACAAAATAAATGGATGTTTTTAATGAGAAAAATAGAGAAGTAATAATAAGTAGAAACGGGAATATGGAGAAAGTAAGAGGCAGCGTTAATTGAACGAGAAGAGAAGCGGAAGTGGAACATCTTTTAAGCCACCCGACCGATGATCAGCCCAGGCGTATGGATGTATCTAATCCAACTACCATTTTCTTCTTTGTATTAATTAGTGGGTGAGAGAGAATGTGAATTTACTATAGATTATTAATTAGTTGTATTTTTTTTTCATTTGCAATTAATGTGACTTTAAGCATTTTTTGCTTCTTTGTTTTTCGGGTTTATAGTTATATTTTAAATATACCTTAGAACATTGTATTAGGTATTTAAAAATAATCTAACCAATATATGAAATAT

mRNA sequence

GGCGTCCATATATAAAATGCGTCCAAGATTTGAAACAGATTTGAGCGCCACAAGCATCTTTTGTCAGTTTAACGACAGAATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGGAAAGACACATCACCAATTCTTGAGGGGTGTAATTGCTATACTTGTCTGAATCATACGAAGGCTTATATAAATCACTTACTAAATGTCCATGAAATGCTGGCTCAGATACTGCTGGAGTTACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGACCAAGCAATCGCAATTTTGCATAAAATCCTAAAAAATCCTCCACTGATGCTGGGAGGAACTTGGACAATTAACCGATTAAGAAAGATGAATGAGGAAGACAGAAGTGAGAATCAAATGCGAATTAGCGTGTGAACGGGGCCTCGGAAGGGTTGTGTTCAAATCGTTGGAAGAAGAGGAAGGTAAATATGAACACATTAAAAGAAATTGGGGAAGGATATTAATAGGTAGTTGGCTCTTGGCAGTGATTTCTACCCAAAAAAAAAACAAAAAACAAGAAAAGGCAATTGGTTGCATGACTGGAAAATCGATTTCGAAGAAAACAAGTTGGAAAACAAAATAAATGGATGTTTTTAATGAGAAAAATAGAGAAGTAATAATAAGTAGAAACGGGAATATGGAGAAAGTAAGAGGCAGCGTTAATTGAACGAGAAGAGAAGCGGAAGTGGAACATCTTTTAAGCCACCCGACCGATGATCAGCCCAGGCGTATGGATGTATCTAATCCAACTACCATTTTCTTCTTTGTATTAATTAGTGGGTGAGAGAGAATGTGAATTTACTATAGATTATTAATTAGTTGTATTTTTTTTTCATTTGCAATTAATGTGACTTTAAGCATTTTTTGCTTCTTTGTTTTTCGGGTTTATAGTTATATTTTAAATATACCTTAGAACATTGTATTAGGTATTTAAAAATAATCTAACCAATATATGAAATAT

Coding sequence (CDS)

ATGCGTCCAAGATTTGAAACAGATTTGAGCGCCACAAGCATCTTTTGTCAGTTTAACGACAGAATGAAATTCGGTGTGAAGGCATGGAGCAACGGCAAGGCGCGCACCGGATTTCTTCAGCTCGGCAACTGCCCTACCGCCATTGAAACTCCCGCTTTACTTCTCTCTACTCGCAAAGGACTGCCTAATTTCATCTCTCCTGATCTTCTTCCCTCTCTCCCTTCCCCTGATTCTCACCTCCTCCAATTCAGTCCTCTTCACTTCTTGGAAGGTCCTTCATCGAAAACAGTATCAAGTATAGGAGGGCTCCAGCATTTACTTGGTTTACATGAATATGGATTTGCAGCAGTACCAAGGGATTCTGTTCAATGCCTTCCAGAATGTGATGCTACAAATAAATTTGGAGCATCTTTTGAGACTACTTCCGGTCGTCGTTTGATTAGACCTGTTGAGTACATTGAAATGATTTCGTCCATGAAACCAGACATTTGGGCATCCTTGGCTGATGAAGTGCCATCGTGGGTTTCAGATAAAAGGAATAAAACATCAGTGGATCGAACTGTGAAATGGCTGGATGAATGCATAACTTTGAACTCAACAGGTGGGGGTGTTTTTGGAGCTATTGTTGGAGGCAATGATATAGAAGAACGCCAAAGATGTGCTGTGGAGGTGGTTAAGCGTAATGTATCAGGTTACTGGATTGGAGGTTTTGGGTCTGGAGAGAGCATGGATGAGCGTCCTGCTCTTCTTGATGCTGTTACGGATGTTTTACCAGAAGAAATGCCACGTATGATCTGTGGGCTTGGACTTCCAGAGGAGATCTTGCAGGGCATTGCAGCGGGAGTCGATCTCTTTGACTCTGCTTACGTATATCATTTAACCCTTGGAGGCTTTGCTCTCACCTTCCCACTTAATGGAATTGTGGAGAAACAGCCTGCCGCACACCTGAAAGATAATGCAAGTGATATGACAAAGATCAACTTAAGAGCAACACTTTATCGGAAAGACACATCACCAATTCTTGAGGGGTGTAATTGCTATACTTGTCTGAATCATACGAAGGCTTATATAAATCACTTACTAAATGTCCATGAAATGCTGGCTCAGATACTGCTGGAGTTACATAATACGCACCACTATTTAGGATTCTTTCGTTCAATCCGAGAAGCAATCAAGGCAGGCAAATTTCAGCAATTTCATCAGAAATTTGTTGAGGTGAGGCGCAATCATCTAGCCTTGCCAACACCAGCACTCAGCTGTTGA

Protein sequence

MRPRFETDLSATSIFCQFNDRMKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTGGGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNASDMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYLGFFRSIREAIKAGKFQQFHQKFVEVRRNHLALPTPALSC

Homology

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BLAST of Lsi11G010110 vs. Swiss-Prot
Match: QTRD1_XENTR (Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Xenopus tropicalis GN=qtrtd1 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.4e-50
Identity = 144/416 (34.62%), Postives = 212/416 (50.96%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQ-LG-NCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSH 81
           MK  +   +NG AR G +  +G N    +E P  LL T+ G P  ++ D L ++      
Sbjct: 1   MKLSISKVANG-ARLGVISNIGRNGDKTLEVPGCLLYTKTGSPPHLTHDTLQTIEG---- 60

Query: 82  LLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYG---FAAVP--------RDSVQCLPEC 141
                    +   +  T+S++   Q +L  ++ G   FA +P         D V   P  
Sbjct: 61  ---------VPAVTHITLSTLAEHQEVLEEYKEGIGKFAGMPDAVLYCSTHDPVSPCPTG 120

Query: 142 DATNKFGASFETTSGRRLIRPVEYIEMISSMKPDIWASLADE--VPSWVSDKRNKTSVDR 201
             TNK   S     GR  +   ++I     ++PD +  L+D    P   S KR K SVDR
Sbjct: 121 YNTNK-AVSLWGAGGRIEMTAQKFISAQRVLRPDWFQCLSDGEVTPGGNSRKRVKKSVDR 180

Query: 202 TVKWLDECITLNSTGGGV-----FGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGE 261
           T+ +LDEC+ L S    +      GA+ GG+ +EER R A E  KR V G+ + GF  G 
Sbjct: 181 TLAFLDECLQLLSGHEDLKPCVLIGAVEGGDLLEERLRSARETAKRPVGGFLLDGFHGG- 240

Query: 262 SMDERPALLDAVTDVLPEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALT 321
           S ++  +L+ AVT  LPE+ PR I G+G P+E+L+ +  GVDLFDS + Y +T  G AL 
Sbjct: 241 SAEKELSLISAVTAALPEDKPRFIHGMGRPDEVLECVQRGVDLFDSCFPYRVTERGCALI 300

Query: 322 F-------PLNGIVEKQPAAHLKDNA-------------SDMT--KINLRATLYRKDTSP 381
           F       P   ++EK   +  + N              ++MT  +I L+   +R+D  P
Sbjct: 301 FSHCYRPDPETAVLEKSETSGAERNGDVGAESEEPDADRAEMTSFEICLKEKRFREDFRP 360

Query: 382 ILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYLGFFRSIREAIKAGK 396
           +LEGC+CY C NH++AY++HLL   E+LA ILL +HN  HY  FF SIR A++ G+
Sbjct: 361 LLEGCSCYCCRNHSRAYVHHLLAAKELLAGILLMIHNFQHYFRFFGSIRAALRDGE 400

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BLAST of Lsi11G010110 vs. Swiss-Prot
Match: QTRD1_DANRE (Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Danio rerio GN=qtrtd1 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 8.8e-48
Identity = 115/337 (34.12%), Postives = 178/337 (52.82%), Query Frame = 1


Query: 102 GLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKP 161
           G++   GLH+        DS    P    TNK   S   + GR  +    ++ + ++++P
Sbjct: 80  GVRKFAGLHDTVIFCSLHDSASPSPAGHVTNKT-VSVWGSGGRIELTAARFMSIQAAVQP 139

Query: 162 DIWASLADEVPSW---VSDKRNKTSVDRTVKWLDECITLNSTG-----GGVFGAIVGGND 221
           D + S+AD   +W    S KR + +VDRT+  LDEC+ L+          +FG + GG+ 
Sbjct: 140 DCYQSMADG-ETWQANTSRKRVRKAVDRTLAHLDECLVLHQKTQELKHAEIFGVVEGGDI 199

Query: 222 IEERQRCAVEVVKRNVSGYWIGGF-GSGESMDERPALLDAVTDVLPEEMPRMICGLGLPE 281
           +EER R A E  KR V G+ + GF  S    D R  L+   +  LP+E PR++ G+G P+
Sbjct: 200 LEERLRSARETAKRPVGGFVLDGFHSSAMDQDVRAQLIQETSAELPQEKPRLVLGVGRPD 259

Query: 282 EILQGIAAGVDLFDSAYVYHLTLGGFALTF-------------------PLNGIVEKQPA 341
           E++  + AGVDLF+S + + +T  G AL+F                     NG   +   
Sbjct: 260 EVISCVEAGVDLFESFFPFQVTERGCALSFNYTIDPDPETAGTSASTVLECNGETPEVKK 319

Query: 342 AHLKDNASDMT--KINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQIL 401
               ++  +MT  +INL+   YR D  P++EGC CY C  H +AY++HLL  +E+LA +L
Sbjct: 320 PSANEDVENMTPFEINLKDKRYRDDFRPLVEGCVCYCCQKHMRAYVHHLLVTNELLAGVL 379

Query: 402 LELHNTHHYLGFFRSIREAIKAGKFQQFHQKFVEVRR 409
           L LHN  HYLGFF+++R+AI + + Q F    +  R+
Sbjct: 380 LMLHNMAHYLGFFKALRDAITSDRLQDFKNTVLHRRQ 414

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BLAST of Lsi11G010110 vs. Swiss-Prot
Match: QTRD1_MOUSE (Queuine tRNA-ribosyltransferase subunit QTRTD1 OS=Mus musculus GN=Qtrtd1 PE=1 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 7.4e-47
Identity = 136/401 (33.92%), Postives = 201/401 (50.12%), Query Frame = 1


Query: 42  GNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIG 101
           G+C   ++ P  LL TR G    ++   L ++             H + G +  T+SS+ 
Sbjct: 24  GDC--TVDIPGCLLYTRTGSAPHLTHQTLRNI-------------HGVPGIAQLTLSSLA 83

Query: 102 -----------GLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPV 161
                      G+   +G+ E  F     D V   P    T+K   S     GR  +   
Sbjct: 84  EHHEVLAEYKKGVGSFIGMPESLFYCSLHDPVTPGPAGYVTSK-SVSVWGFGGRVEMTVS 143

Query: 162 EYIEMISSMKPDIWASLADEVPSWV---SDKRNKTSVDRTVKWLDECITLNSTG-----G 221
           +++ +  +++PD +  L+D   S     S KR + SVDR++ +LD C+ L          
Sbjct: 144 KFMAIQEALQPDWFQCLSDGEASCAETTSIKRARKSVDRSLLFLDSCLRLQEESEVLQKS 203

Query: 222 GVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDE-RPALLDAVTDVLPEEM 281
            + G I GG+ +EER R A E  KR V G+ + GF    ++ E R  LL +VT  LPE+ 
Sbjct: 204 VIIGVIEGGDVMEERLRSARETAKRPVGGFLLDGFQGDPAVTETRLHLLSSVTAELPEDK 263

Query: 282 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPL-------------NGIV 341
           PR+ICG+  P+E+L+ I  GVDLF+S + Y +T  G ALTF               NGI 
Sbjct: 264 PRLICGVSRPDEVLECIERGVDLFESFFPYQVTERGCALTFTFDCQLNPEETLLQQNGIQ 323

Query: 342 EK----QPAAHLKDNA--SDMT--KINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHL 401
           EK      A  ++      +MT  +INL+   Y++D  P++ GC+CY C NHT+AYI+HL
Sbjct: 324 EKIKGLDQAKKIEATGCNQEMTSFEINLKEKKYQEDFDPLVRGCSCYCCKNHTRAYIHHL 383

[Close]

BLAST of Lsi11G010110 vs. Swiss-Prot
Match: QTRD1_XENLA (Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Xenopus laevis GN=qtrtd1 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-46
Identity = 131/385 (34.03%), Postives = 192/385 (49.87%), Query Frame = 1


Query: 43  NCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIGG 102
           N    +E P  LL T+   P  ++ D L ++    +  +    L  L            G
Sbjct: 23  NGDKTLEVPGCLLYTKTASPPHLTHDTLQTIEGVPA--VTHITLSTLAEHQEVLEEYKEG 82

Query: 103 LQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKPD 162
           +    GL +  F     D V   P    TNK   S   + GR  +   ++I     ++PD
Sbjct: 83  IGKFAGLPDAVFYCSTHDPVSPCPTGYNTNK-AVSLWGSGGRIEMTTQKFISAQRVLRPD 142

Query: 163 IWASLADE--VPSWVSDKRNKTSVDRTVKWLDECITLNSTGGGV-----FGAIVGGNDIE 222
            +  L+D    P   S KR K SVDR++ +LDEC+ L S    +      GA+ GG+ ++
Sbjct: 143 WFQCLSDGEVTPGGNSRKRIKKSVDRSLVFLDECLQLLSEHEELKPCVLIGAVEGGDLLD 202

Query: 223 ERQRCAVEVVKRNVSGYWIGGF-GSGESMDERPALLDAVTDVLPEEMPRMICGLGLPEEI 282
           ER R A E  KR V G+ + GF G     + + +L+ AVT  LPE+ PR I G+G P+E+
Sbjct: 203 ERLRSARETAKRPVGGFLLDGFHGISAGNEAKLSLVSAVTAELPEDKPRFIHGVGRPDEV 262

Query: 283 LQGIAAGVDLFDSAYVYHLTLGGFALTF-------PLNGIVEKQPAAHLKDNA------- 342
           L+ I  GVDLFDS + Y +T  G AL F       P   ++EK   +  + N        
Sbjct: 263 LEFIQRGVDLFDSCFPYQVTERGCALIFTHCHRPDPETAVLEKSEMSDTERNGDVGAEIE 322

Query: 343 ------SDMT--KINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILL 398
                 ++MT  +I L+   +R+D  P+LEGC CY C NH++AY++HLL   E+LA ILL
Sbjct: 323 EPDADQAEMTPFEICLKEKRFREDFGPLLEGCTCYCCRNHSRAYVHHLLMAKELLAGILL 382

[Close]

BLAST of Lsi11G010110 vs. Swiss-Prot
Match: QTRD1_PONAB (Queuine tRNA-ribosyltransferase subunit QTRTD1 OS=Pongo abelii GN=QTRTD1 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-46
Identity = 131/395 (33.16%), Postives = 202/395 (51.14%), Query Frame = 1


Query: 48  IETPALLLSTRKGLPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIGGLQHLL 107
           ++ P  LL T+ G           S P    H L    +H +   +  T+SS+     +L
Sbjct: 28  MDIPGCLLYTKTG-----------SAPHLTHHTLH--NIHGVPAMAQLTLSSLAEHHEVL 87

Query: 108 GLHEYG---FAAVPRDSVQC-----LPECDA---TNKFGASFETTSGRRLIRPVEYIEMI 167
             ++ G   F  +P   + C     +  C A   TNK   S  + +GR  +   +++ + 
Sbjct: 88  REYKEGVGKFIGMPESLLYCSLHDPVSPCPAGYVTNK-SVSVWSVAGRVEMTVSKFMAIQ 147

Query: 168 SSMKPDIWASLADEVPSW---VSDKRNKTSVDRTVKWLDECITLNSTG-----GGVFGAI 227
            +++PD +  L+D   S     S KR + SVDR++ +LD C+ L           + G I
Sbjct: 148 QALQPDWFQCLSDGEVSCKEATSIKRVRKSVDRSLLFLDNCLRLQEESEVLQKSVIIGVI 207

Query: 228 VGGNDIEERQRCAVEVVKRNVSGYWIGGF-GSGESMDERPALLDAVTDVLPEEMPRMICG 287
            GG+ +EER R A E  KR V G+ + GF G+  +++ R  LL +VT  LPE+ PR+I G
Sbjct: 208 EGGDVMEERLRSARETAKRPVGGFLLDGFQGNPTTLETRLRLLSSVTAELPEDKPRLISG 267

Query: 288 LGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTF-------PLNGIVEK---QPAAHLK 347
           +  P+E+L+ I  GVDLF+S + Y +T  G ALTF       P   ++++   Q      
Sbjct: 268 VSRPDEVLECIERGVDLFESFFPYQVTERGCALTFSFDYQPNPEETLLQQNGTQEEIKCM 327

Query: 348 DNASDMT-----------KINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEM 402
           D    M            +INL+   Y++D +P++ GC+CY C NHT+AYI+HLL  +E+
Sbjct: 328 DQIKKMETTGCNQEITSFEINLKEKKYQEDFNPLVRGCSCYCCKNHTRAYIHHLLVTNEL 387

[Close]

BLAST of Lsi11G010110 vs. TrEMBL
Match: F6HN52_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06920 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 4.4e-179
Identity = 300/390 (76.92%), Postives = 335/390 (85.90%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF V AWS G+AR G LQL NCP  +ETPALLLSTRKGLP FISPDLLPSLPSPDSHLL
Sbjct: 24  MKFAVTAWSKGRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHLL 83

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
           Q SPLHFL+G SSKT+S+IGGL  +LGLHEYGFAAVPRDS+ CLPECD+TNK GASFET 
Sbjct: 84  QMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETP 143

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
           SGRRLI+PVEY+EMISSMKP +WA+LADEVP+WVS KRNK SVDRT++WLDECITL+  G
Sbjct: 144 SGRRLIKPVEYMEMISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSPAG 203

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGG ++EERQRCA EV  RNVSGYWIGGFG GESMDERPALL+AV D+LP E 
Sbjct: 204 GAVFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADILPVER 263

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PR ICGL LPEE+LQG+AAG+DLFDS Y+YHLTLGGFALTFPL  I   +  + L D  S
Sbjct: 264 PRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGS 323

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           D TKINLRAT+YRKDT+PI++ CNCYTC NHT+AYINHLLNVHEMLAQILLE+HNTHHYL
Sbjct: 324 DHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYL 383

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHL 412
           GFFRSIR AIK   F+QF Q F++ RR HL
Sbjct: 384 GFFRSIRTAIKEDNFEQFRQTFIDSRREHL 413

[Close]

BLAST of Lsi11G010110 vs. TrEMBL
Match: A0A061FR85_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_036201 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 7.7e-176
Identity = 296/392 (75.51%), Postives = 335/392 (85.46%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF VKAWSNG AR G L L  CPT IETP+LLLSTRKGLP FISPDLLPSLPSPDS LL
Sbjct: 1   MKFAVKAWSNGSARAGVLHLSCCPTPIETPSLLLSTRKGLPLFISPDLLPSLPSPDSRLL 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
             SPLHFLEG S KT+S IGGL  LLGLHEYGF AVPRDS+QCLPE + TNK GASFET 
Sbjct: 61  YVSPLHFLEGLSIKTISKIGGLHQLLGLHEYGFVAVPRDSIQCLPEANGTNKLGASFETP 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
            GR LI+PVEY+EMISSMKP++WA+LADEVP+WVSDKRNKTSVDRT+KWLDECI  +  G
Sbjct: 121 CGRLLIKPVEYMEMISSMKPELWATLADEVPAWVSDKRNKTSVDRTIKWLDECIVSSPVG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGG+ +EERQRCA EV +RNVSGYW+GGFG GESM+ERPALL+AV + LPEE 
Sbjct: 181 GAVFGAIVGGSSLEERQRCAQEVARRNVSGYWVGGFGLGESMNERPALLNAVIETLPEEK 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PR ICGLGLPEEILQG+AAGVDLF+S Y+YHLTLGGFALTFPL+ +          D  S
Sbjct: 241 PRFICGLGLPEEILQGVAAGVDLFESTYIYHLTLGGFALTFPLDSMEINASNLASSDVGS 300

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           D+ KINLRAT++RKDT+PI+EGC CYTC NHT+AYINHLLNVHEMLAQILLE+HNTHH+L
Sbjct: 301 DLRKINLRATVFRKDTTPIIEGCTCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHFL 360

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHLAL 414
           GFFRSIREAIKAG+F++F +KFV+ R +HLA+
Sbjct: 361 GFFRSIREAIKAGRFEEFRKKFVQSRCDHLAV 392

[Close]

BLAST of Lsi11G010110 vs. TrEMBL
Match: M5Y1Y6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023702mg PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 1.8e-169
Identity = 286/397 (72.04%), Postives = 334/397 (84.13%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF VKAWS+GKAR G LQLG+CP  IETP+LLLSTRKGLP+FI PDLL SLPSPDSHL 
Sbjct: 1   MKFAVKAWSSGKARAGVLQLGSCPGPIETPSLLLSTRKGLPHFIPPDLLYSLPSPDSHLF 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
             S LHFLEG S +T+S IGGL  +LGL E+GF  +PRDS+QCLPEC+++NKFGASFET 
Sbjct: 61  HVSSLHFLEGLSPQTISKIGGLHQMLGLPEHGFVCIPRDSIQCLPECNSSNKFGASFETP 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
            GRRLI+PVEY+E+ISS++P+IW +LADEVP+WVS+KRNKTSVDRT++WLDECI LN  G
Sbjct: 121 CGRRLIKPVEYVELISSLRPNIWTTLADEVPTWVSEKRNKTSVDRTIRWLDECIALNPAG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFG+IVGG  ++ER+RCA E  +RN+SGYWIGGFG GESMDERPALL+AVTD+L EE 
Sbjct: 181 GPVFGSIVGGCSVKERERCAQEAARRNLSGYWIGGFGLGESMDERPALLNAVTDILQEEK 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDN-A 321
           PR+I GLGLPEEILQG+AAG+D+FDS Y+ HLTLGGFALTFPL+G+       +  DN  
Sbjct: 241 PRLITGLGLPEEILQGVAAGIDVFDSTYLCHLTLGGFALTFPLDGV-----EMNTSDNIG 300

Query: 322 SDMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHY 381
           SD TKINLRAT+YRKD SPI+E CNCYTC NHTKAYINHLLNVHEMLAQ LLE+HNTHHY
Sbjct: 301 SDQTKINLRATVYRKDISPIVENCNCYTCKNHTKAYINHLLNVHEMLAQTLLEIHNTHHY 360

Query: 382 LGFFRSIREAIKAGKFQQFHQKFVEVRRNHLALPTPA 418
           +GFF S+REAIK+G F+QF QKFVE R  H+A    A
Sbjct: 361 IGFFCSVREAIKSGNFEQFRQKFVEGRCYHVAAEAAA 392

[Close]

BLAST of Lsi11G010110 vs. TrEMBL
Match: A0A067LMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17256 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.0e-168
Identity = 290/412 (70.39%), Postives = 342/412 (83.01%), Query Frame = 1


Query: 1   MRPRFETDLSATSIFCQFNDRMKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKG 60
           +R  +E +LS+     +    M F VKAWS+GKARTG L +GNC + +ETPALLLSTRKG
Sbjct: 19  LRRYYEGNLSSEHQQRKGGGSMNFAVKAWSSGKARTGVLHVGNCTSPVETPALLLSTRKG 78

Query: 61  LPNFISPDLLPSLPSPDSHLLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRD 120
           LP+FISPDLLPSLP PDS LLQFSPLHFLEG S KT+S+IGGL  +LGL E+ FAAV RD
Sbjct: 79  LPHFISPDLLPSLPYPDSALLQFSPLHFLEGLSMKTISNIGGLHQMLGLDEHAFAAVARD 138

Query: 121 SVQCLPECDATNKFGASFETTSGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRN 180
           SVQ LPE ++TNK GASFET  GR LI+PVEY++MISSMKP+IW +LADEVP+WVSDKRN
Sbjct: 139 SVQILPESNSTNKLGASFETPCGRILIKPVEYLQMISSMKPNIWTTLADEVPAWVSDKRN 198

Query: 181 KTSVDRTVKWLDECITLNSTGGGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSG 240
           + SVDRTVKWLDECI L+   G VFGAIVGG++++ER+RCA E+ KRNVSGYWIGGFG G
Sbjct: 199 RISVDRTVKWLDECIALSLADGVVFGAIVGGSNLDERKRCAEEIAKRNVSGYWIGGFGLG 258

Query: 241 ESMDERPALLDAVTDVLPEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFAL 300
           ESMDERPAL+D V + LP E PR+I GLGLPEE+LQG+AAG+DLFDS+YVY+LTLGGFAL
Sbjct: 259 ESMDERPALIDTVIESLPGEKPRLISGLGLPEEVLQGVAAGIDLFDSSYVYNLTLGGFAL 318

Query: 301 TFPLNGIVEKQPAAHLKDNASDMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHL 360
           TFPL+ I     +    +   D TKINL+AT+YRKDTSPI+  C+CYTC NHTKAYINHL
Sbjct: 319 TFPLDQIEMNSSSFQSTEMGIDQTKINLKATVYRKDTSPIVASCSCYTCQNHTKAYINHL 378

Query: 361 LNVHEMLAQILLELHNTHHYLGFFRSIREAIKAGKFQQFHQKFVEVRRNHLA 413
           LNVHEMLAQILLE+HNTHHYLGFFRSIREAIK G+F+QF + FV+ RR++LA
Sbjct: 379 LNVHEMLAQILLEIHNTHHYLGFFRSIREAIKDGRFEQFQKMFVQRRRDNLA 430

[Close]

BLAST of Lsi11G010110 vs. TrEMBL
Match: B9IQC4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10480g PE=4 SV=2)

HSP 1 Score: 596.7 bits (1537), Expect = 2.2e-167
Identity = 290/397 (73.05%), Postives = 334/397 (84.13%), Query Frame = 1


Query: 22  MKFGVKAWSNGK----ARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPD 81
           MKF VKAWS  K    ARTG  QLGNCP  IETPALLLSTRKGLP+FISPDLLPSLP PD
Sbjct: 1   MKFSVKAWSTSKGNSAARTGVFQLGNCPQ-IETPALLLSTRKGLPHFISPDLLPSLPIPD 60

Query: 82  SHLLQFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGAS 141
           S LL  SPLHF+EG SSKT+SSIGG+  ++GLH++G AAV RDS+QCLPE  ATNK GAS
Sbjct: 61  SSLLHVSPLHFMEGISSKTISSIGGIHKMIGLHDFGLAAVARDSIQCLPESSATNKLGAS 120

Query: 142 FETTSGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITL 201
           FET  GR LI+P EY+ +ISS++P++WA+LADEVP+WVS KRNK SVDRTVKWLDEC+ L
Sbjct: 121 FETPCGRLLIKPAEYMGIISSLRPNLWATLADEVPAWVSKKRNKNSVDRTVKWLDECVAL 180

Query: 202 NSTGGGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVL 261
           +   G  FGAIVGG+D+EER+RCA EVVKRNVSGYWIGGFG GES DERPALL AVTD+L
Sbjct: 181 SPASGVAFGAIVGGSDVEERRRCAQEVVKRNVSGYWIGGFGFGESTDERPALLSAVTDIL 240

Query: 262 PEEMPRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLK 321
           P++ PR+I GLGLPEE+LQG+AAG+DLFDS+Y+YHLT+GGFALTFPL+    K  A+ LK
Sbjct: 241 PKDGPRLISGLGLPEEVLQGVAAGIDLFDSSYIYHLTIGGFALTFPLD---NKTYASDLK 300

Query: 322 --DNASDMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELH 381
                SD TKINL+AT+YRKD +PI+E C+CYTC NHTKAYINHLLNVHEMLAQILLE+H
Sbjct: 301 LTGMGSDQTKINLKATVYRKDATPIVESCSCYTCQNHTKAYINHLLNVHEMLAQILLEIH 360

Query: 382 NTHHYLGFFRSIREAIKAGKFQQFHQKFVEVRRNHLA 413
           NTHHYLGFFRSIREAIK G+F+QF + FVE RR HLA
Sbjct: 361 NTHHYLGFFRSIREAIKEGRFEQFREMFVEKRRIHLA 393

[Close]

BLAST of Lsi11G010110 vs. NCBI nr
Match: gi|659081112|ref|XP_008441158.1| (PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis melo])

HSP 1 Score: 778.1 bits (2008), Expect = 7.8e-222
Identity = 374/399 (93.73%), Postives = 384/399 (96.24%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLST KGLPNFISPDLLPSLPSPDSH+L
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTSKGLPNFISPDLLPSLPSPDSHIL 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
           QFSPLHFLEGPSSKT+SSIGGLQHLLGLHEYGFAAV RDSVQCLP+CDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISSIGGLQHLLGLHEYGFAAVARDSVQCLPQCDATNKFGASFETT 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PRMICGLGLPEEILQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQPAAHL DNA 
Sbjct: 241 PRMICGLGLPEEILQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPAAHLIDNAI 300

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           DMTKINLRAT+YRKDTSPILEGC CYTCLNHTKAYINHLLNVHEMLAQILLE+HNTHHYL
Sbjct: 301 DMTKINLRATIYRKDTSPILEGCTCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTHHYL 360

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHLALPTPALSC 421
           GFFRSIREAIK GKFQQFHQKFVE RRNHL LP  ALSC
Sbjct: 361 GFFRSIREAIKVGKFQQFHQKFVEERRNHLTLPKSALSC 399

[Close]

BLAST of Lsi11G010110 vs. NCBI nr
Match: gi|449441796|ref|XP_004138668.1| (PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis sativus])

HSP 1 Score: 766.1 bits (1977), Expect = 3.1e-218
Identity = 369/398 (92.71%), Postives = 383/398 (96.23%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF VKAWSNGKARTGFLQLGNCP AI+TPALLLSTRKGLP+FISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVKAWSNGKARTGFLQLGNCPAAIDTPALLLSTRKGLPHFISPDLLPSLPSPDSHLL 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
           QFSPLHFLEGPSSKT+S+IGGLQHLLGLHEYGFAAV RDSVQ LPECDATNKFGASFETT
Sbjct: 61  QFSPLHFLEGPSSKTISNIGGLQHLLGLHEYGFAAVARDSVQSLPECDATNKFGASFETT 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
            GRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECI LNSTG
Sbjct: 121 CGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECIALNSTG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGGND+EERQRCAVEVVKRNVSGYWIGGFG GESMDERP+LLDAVTDVLPEEM
Sbjct: 181 GAVFGAIVGGNDLEERQRCAVEVVKRNVSGYWIGGFGFGESMDERPSLLDAVTDVLPEEM 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PRMICGLGLPEE+LQGIAAGVDLFDSAY+YHLTLGGFALTFPL+GIVEKQP AHL DNAS
Sbjct: 241 PRMICGLGLPEEVLQGIAAGVDLFDSAYIYHLTLGGFALTFPLDGIVEKQPDAHLIDNAS 300

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           DMTKINLRA ++RKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLE+HNT+HYL
Sbjct: 301 DMTKINLRAIVFRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLEIHNTYHYL 360

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHLALPTPALS 420
           GFF+SIREAIK GKFQQFHQKFVE RRNHL LPT ALS
Sbjct: 361 GFFQSIREAIKVGKFQQFHQKFVEERRNHLTLPTSALS 398

[Close]

BLAST of Lsi11G010110 vs. NCBI nr
Match: gi|297741049|emb|CBI31361.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 635.6 bits (1638), Expect = 6.3e-179
Identity = 300/390 (76.92%), Postives = 335/390 (85.90%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF V AWS G+AR G LQL NCP  +ETPALLLSTRKGLP FISPDLLPSLPSPDSHLL
Sbjct: 1   MKFAVTAWSKGRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHLL 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
           Q SPLHFL+G SSKT+S+IGGL  +LGLHEYGFAAVPRDS+ CLPECD+TNK GASFET 
Sbjct: 61  QMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETP 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
           SGRRLI+PVEY+EMISSMKP +WA+LADEVP+WVS KRNK SVDRT++WLDECITL+  G
Sbjct: 121 SGRRLIKPVEYMEMISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSPAG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGG ++EERQRCA EV  RNVSGYWIGGFG GESMDERPALL+AV D+LP E 
Sbjct: 181 GAVFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADILPVER 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PR ICGL LPEE+LQG+AAG+DLFDS Y+YHLTLGGFALTFPL  I   +  + L D  S
Sbjct: 241 PRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGS 300

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           D TKINLRAT+YRKDT+PI++ CNCYTC NHT+AYINHLLNVHEMLAQILLE+HNTHHYL
Sbjct: 301 DHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYL 360

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHL 412
           GFFRSIR AIK   F+QF Q F++ RR HL
Sbjct: 361 GFFRSIRTAIKEDNFEQFRQTFIDSRREHL 390

[Close]

BLAST of Lsi11G010110 vs. NCBI nr
Match: gi|731436465|ref|XP_002277122.2| (PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 homolog [Vitis vinifera])

HSP 1 Score: 635.6 bits (1638), Expect = 6.3e-179
Identity = 300/390 (76.92%), Postives = 335/390 (85.90%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF V AWS G+AR G LQL NCP  +ETPALLLSTRKGLP FISPDLLPSLPSPDSHLL
Sbjct: 24  MKFAVTAWSKGRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPDSHLL 83

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
           Q SPLHFL+G SSKT+S+IGGL  +LGLHEYGFAAVPRDS+ CLPECD+TNK GASFET 
Sbjct: 84  QMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGASFETP 143

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
           SGRRLI+PVEY+EMISSMKP +WA+LADEVP+WVS KRNK SVDRT++WLDECITL+  G
Sbjct: 144 SGRRLIKPVEYMEMISSMKPSLWATLADEVPAWVSAKRNKASVDRTLRWLDECITLSPAG 203

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGG ++EERQRCA EV  RNVSGYWIGGFG GESMDERPALL+AV D+LP E 
Sbjct: 204 GAVFGAIVGGANVEERQRCAQEVAGRNVSGYWIGGFGLGESMDERPALLNAVADILPVER 263

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PR ICGL LPEE+LQG+AAG+DLFDS Y+YHLTLGGFALTFPL  I   +  + L D  S
Sbjct: 264 PRQICGLELPEEVLQGVAAGIDLFDSTYIYHLTLGGFALTFPLESIQRHEFDSRLSDVGS 323

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           D TKINLRAT+YRKDT+PI++ CNCYTC NHT+AYINHLLNVHEMLAQILLE+HNTHHYL
Sbjct: 324 DHTKINLRATIYRKDTAPIVDNCNCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHYL 383

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHL 412
           GFFRSIR AIK   F+QF Q F++ RR HL
Sbjct: 384 GFFRSIRTAIKEDNFEQFRQTFIDSRREHL 413

[Close]

BLAST of Lsi11G010110 vs. NCBI nr
Match: gi|590602716|ref|XP_007019819.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 624.8 bits (1610), Expect = 1.1e-175
Identity = 296/392 (75.51%), Postives = 335/392 (85.46%), Query Frame = 1


Query: 22  MKFGVKAWSNGKARTGFLQLGNCPTAIETPALLLSTRKGLPNFISPDLLPSLPSPDSHLL 81
           MKF VKAWSNG AR G L L  CPT IETP+LLLSTRKGLP FISPDLLPSLPSPDS LL
Sbjct: 1   MKFAVKAWSNGSARAGVLHLSCCPTPIETPSLLLSTRKGLPLFISPDLLPSLPSPDSRLL 60

Query: 82  QFSPLHFLEGPSSKTVSSIGGLQHLLGLHEYGFAAVPRDSVQCLPECDATNKFGASFETT 141
             SPLHFLEG S KT+S IGGL  LLGLHEYGF AVPRDS+QCLPE + TNK GASFET 
Sbjct: 61  YVSPLHFLEGLSIKTISKIGGLHQLLGLHEYGFVAVPRDSIQCLPEANGTNKLGASFETP 120

Query: 142 SGRRLIRPVEYIEMISSMKPDIWASLADEVPSWVSDKRNKTSVDRTVKWLDECITLNSTG 201
            GR LI+PVEY+EMISSMKP++WA+LADEVP+WVSDKRNKTSVDRT+KWLDECI  +  G
Sbjct: 121 CGRLLIKPVEYMEMISSMKPELWATLADEVPAWVSDKRNKTSVDRTIKWLDECIVSSPVG 180

Query: 202 GGVFGAIVGGNDIEERQRCAVEVVKRNVSGYWIGGFGSGESMDERPALLDAVTDVLPEEM 261
           G VFGAIVGG+ +EERQRCA EV +RNVSGYW+GGFG GESM+ERPALL+AV + LPEE 
Sbjct: 181 GAVFGAIVGGSSLEERQRCAQEVARRNVSGYWVGGFGLGESMNERPALLNAVIETLPEEK 240

Query: 262 PRMICGLGLPEEILQGIAAGVDLFDSAYVYHLTLGGFALTFPLNGIVEKQPAAHLKDNAS 321
           PR ICGLGLPEEILQG+AAGVDLF+S Y+YHLTLGGFALTFPL+ +          D  S
Sbjct: 241 PRFICGLGLPEEILQGVAAGVDLFESTYIYHLTLGGFALTFPLDSMEINASNLASSDVGS 300

Query: 322 DMTKINLRATLYRKDTSPILEGCNCYTCLNHTKAYINHLLNVHEMLAQILLELHNTHHYL 381
           D+ KINLRAT++RKDT+PI+EGC CYTC NHT+AYINHLLNVHEMLAQILLE+HNTHH+L
Sbjct: 301 DLRKINLRATVFRKDTTPIIEGCTCYTCQNHTRAYINHLLNVHEMLAQILLEIHNTHHFL 360

Query: 382 GFFRSIREAIKAGKFQQFHQKFVEVRRNHLAL 414
           GFFRSIREAIKAG+F++F +KFV+ R +HLA+
Sbjct: 361 GFFRSIREAIKAGRFEEFRKKFVQSRCDHLAV 392

The following BLAST results are available for this feature:

BLAST of Lsi11G010110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
QTRD1_XENTR	9.4e-50	34.62	Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Xenopus tropicalis GN=qtrtd1 P...	[more]
QTRD1_DANRE	8.8e-48	34.12	Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Danio rerio GN=qtrtd1 PE=2 SV=...	[more]
QTRD1_MOUSE	7.4e-47	33.92	Queuine tRNA-ribosyltransferase subunit QTRTD1 OS=Mus musculus GN=Qtrtd1 PE=1 SV...	[more]
QTRD1_XENLA	1.3e-46	34.03	Queuine tRNA-ribosyltransferase subunit qtrtd1 OS=Xenopus laevis GN=qtrtd1 PE=2 ...	[more]
QTRD1_PONAB	3.7e-46	33.16	Queuine tRNA-ribosyltransferase subunit QTRTD1 OS=Pongo abelii GN=QTRTD1 PE=2 SV...	[more]

BLAST of Lsi11G010110 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HN52_VITVI	4.4e-179	76.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06920 PE=4 SV=...	[more]
A0A061FR85_THECC	7.7e-176	75.51	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_036201 PE=4 SV=1	[more]
M5Y1Y6_PRUPE	1.8e-169	72.04	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023702mg PE=4 SV=1	[more]
A0A067LMK9_JATCU	2.0e-168	70.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17256 PE=4 SV=1	[more]
B9IQC4_POPTR	2.2e-167	73.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10480g PE=4 SV=2	[more]

BLAST of Lsi11G010110 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi11G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081112\|ref\|XP_008441158.1\|	7.8e-222	93.73	PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis melo]	[more]
gi\|449441796\|ref\|XP_004138668.1\|	3.1e-218	92.71	PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis sativus]	[more]
gi\|297741049\|emb\|CBI31361.3\|	6.3e-179	76.92	unnamed protein product [Vitis vinifera]	[more]
gi\|731436465\|ref\|XP_002277122.2\|	6.3e-179	76.92	PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 homolog [Vitis vinifer...	[more]
gi\|590602716\|ref\|XP_007019819.1\|	1.1e-175	75.51	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008616	queuosine biosynthetic process
GO:0006400	tRNA modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0008479	queuine tRNA-ribosyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR002616	tRNA_ribo_trans-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008616	queuosine biosynthetic process
biological_process	GO:0006400	tRNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008479	queuine tRNA-ribosyltransferase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G010110.1	Lsi11G010110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002616	tRNA-guanine(15) transglycosylase-like	GENE3D	G3DSA:3.20.20.105		coord: 19..406 score: 5.0E
IPR002616	tRNA-guanine(15) transglycosylase-like	PFAM	PF01702	TGT	coord: 151..403 score: 5.3
IPR002616	tRNA-guanine(15) transglycosylase-like	TIGRFAMs	TIGR00449	TIGR00449	coord: 34..407 score: 8.8
IPR002616	tRNA-guanine(15) transglycosylase-like	unknown	SSF51713	tRNA-guanine transglycosylase	coord: 22..406 score: 8.37
None	No IPR available	PANTHER	PTHR21148	PHOSDUCIN-RELATED	coord: 17..412 score: 1.5E
None	No IPR available	PANTHER	PTHR21148:SF26	QUEUINE TRNA-RIBOSYLTRANSFERASE SUBUNIT QTRTD1	coord: 17..412 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G010110	Csa2G396210	Cucumber (Chinese Long) v2	culsiB101
Lsi11G010110	CSPI02G24550	Wild cucumber (PI 183967)	cpilsiB098
Lsi11G010110	Cucsa.088680	Cucumber (Gy14) v1	cgylsiB097
Lsi11G010110	CmaCh15G000090	Cucurbita maxima (Rimu)	cmalsiB269
Lsi11G010110	CmaCh04G030310	Cucurbita maxima (Rimu)	cmalsiB637
Lsi11G010110	CmoCh04G031530	Cucurbita moschata (Rifu)	cmolsiB624
Lsi11G010110	CmoCh15G000080	Cucurbita moschata (Rifu)	cmolsiB258
Lsi11G010110	Cla011984	Watermelon (97103) v1	lsiwmB112
Lsi11G010110	MELO3C008079	Melon (DHL92) v3.5.1	lsimeB107
Lsi11G010110	ClCG11G008830	Watermelon (Charleston Gray)	lsiwcgB079
Lsi11G010110	MELO3C008079.2	Melon (DHL92) v3.6.1	lsimedB115
Lsi11G010110	Cla97C11G214910	Watermelon (97103) v2	lsiwmbB081
Lsi11G010110	Bhi04G002101	Wax gourd	lsiwgoB122
Lsi11G010110	Cp4.1LG01g26260	Cucurbita pepo (Zucchini)	cpelsiB322
Lsi11G010110	Cp4.1LG13g11860	Cucurbita pepo (Zucchini)	cpelsiB139
Lsi11G010110	CsGy2G024310	Cucumber (Gy14) v2	cgyblsiB091
Lsi11G010110	Carg06103	Silver-seed gourd	carlsiB014
Lsi11G010110	CsaV3_2G033090	Cucumber (Chinese Long) v3	cuclsiB111

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G010110	Silver-seed gourd	carlsiB186
Lsi11G010110	Cucumber (Chinese Long) v3	cuclsiB458
Lsi11G010110	Bottle gourd (USVL1VR-Ls)	lsilsiB047
Lsi11G010110	Cucurbita maxima (Rimu)	cmalsiB092
Lsi11G010110	Cucurbita maxima (Rimu)	cmalsiB472
Lsi11G010110	Cucurbita maxima (Rimu)	cmalsiB784
Lsi11G010110	Cucurbita moschata (Rifu)	cmolsiB089
Lsi11G010110	Cucurbita pepo (Zucchini)	cpelsiB199
Lsi11G010110	Wild cucumber (PI 183967)	cpilsiB435
Lsi11G010110	Melon (DHL92) v3.5.1	lsimeB094
Lsi11G010110	Melon (DHL92) v3.5.1	lsimeB120
Lsi11G010110	Watermelon (Charleston Gray)	lsiwcgB090
Lsi11G010110	Melon (DHL92) v3.6.1	lsimedB127