Lsi11G009740 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G009740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RING/FYVE/PHD zinc finger protein
Location	chr11 : 15672259 .. 15676999 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCCCCCCCCCCCCCCCTCAATTTCATCATCTCAATTTTTATCATCCTGTAATCCATCGATTCCTCTTTCTAGGGTTTCTTTCTTTTCTTGATTTGACCGCCTGTATTGGGTGTTTGGTTTTTCTGTGATATATAGGGTTTTGAGAACAATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCGACCAGTTGCTCCACTTCAACCTGTCTCCGACCCGGTTGATCCTCTTCCTTCTGCACCCCGTGAGCCTGTCGCGGACTCGCCTGCGCCTGCGGCTGGTCCTTCGTGTTCTACTGCAACTGCGGATGATCGGACGGAGCAGCAGGATGCACCCAATGAGGAGGAGCCTTTGATTCAGGCGGCCGAGTGCCGCATTTGTCAGGAAGAAGACAGCCTCAATAATTTAGAAACTCCCTGTGCATGTAGTGGTAGTCTTAAGGTATTCACGCCTCACCCCTTTCTACTGTTTCTTATTTTTTTAATGTGAATAAACAAACAGGACACCCTTTTGGCATAGTTCATTGATTTGACCTTGTCTTTTTCGCTGCGTTGGATTTATGGACGGTGTTGCTGCTGAATTGGAAATTTTTTATCTAGTCCTTTCATTTAGTTCAATTGGGTTTAGTAACGTTCTGCTTTTTTCTGTCATGGGATGTTTTTAAGTCTATATTTACAGTGCCTTGTTTGAAATAGACGTGCTAATATTTTGGGAGGATTTATATCATTAATGTGGGGAGGACTGAGATGAAGTGCACGAAATAACTTGGTTGATTGGTGGTCATTAGTTTTATTCATAGTTTGGTTGATTGCATATTGCTCTATATAAAATTTTCCCAATGCTTTGTTTGAGACCTTTTTAATGTCATCTCCCGTCTAATAGTTTGGTGATAACAATAATTCTTTGCCTAGTTTGTATTTGTTTTGGATCAATTGCTATGATCGAATGGGGAATTTTTTGAGCTTGTGTGTGGTGTATCTGAGTTATAATCTGGCTTATCATTCATGGTGTCATCAGTCATGGTACAATTAGGGATCCACGAACTCTGTTTTTTTCTCTCCAGAATGCAACTAAATTAGGTTATGCCCTTTGAATTGACCACTATGAACCCGTATGGTGAAATTTAACGGGCTTTTTTGTTTATTAAGCTTTTGTACGTGTCTGATGAATCTTTTGTGTTCAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGCGAGATATGTCATCAGGTATACATGATGCTTTTGATTTGATATGTTGACTGTTGTATTATTATTTTTAATTTTCTTGCAGTTTTAGAATTTCAAATGAATTGCTAATATTATCTTTATACTTTAGCTTGCGTGCAAGTTGTCCTCCTAGTATCTTTTTTTTTTTTTTTGACCTCATAACTCTTCGGATTTTGAGAAATTGCATCTTTTACATTGGGAGTTCAAAATTTTCATAATTAATTTTAAAACATGCATGCTTAAGAGGGGCATCTCGCCTACCTCTAATAAGGCATGCACCTGATAGTTCTATTTTGTAATTTTAAAAGAGGTGTATAGCGTATGCCTCTCAATTTTTTTAGTTTTATATATTGAAAATGGTTCAGAGTTTGTTTTGGTTGCTGCTGTAGGAGACAACCATAGAAATCGAGAAAGAGAATTTGCTACTCTAGAAACCCCATGGATGAAGGGTACTTTTGCCCTTTTTCTTCTTTGCATATTTGTTTCTACTCTCGACCAATCTCTTTTGTCTATGCTCTCCAAACCCTACCTTTTTTCGTCTTTTCCTTTGATACATCCATCTCTGAGAAAACCATAAAAGTGGTTCTCTATAATAGCGCACACAATGATTTGGGACGTTTTGCAACGGGCTGGATATTTTTTTGGGATAGTTTGAATCTAATATTGTAGGAGATTGTTCCAACTCTGGGAGAAGAAGATGAGCAGCATGTCAATAGTTGGATTTCTCCTTCCTCATGCTCAACCAAAAGTAATGTTGGATACCATTTTGGATGTTCGATGTGTGGAGAAAGCTTGATGCTGATTATTGTTGGAGATGGTGGAGGTAAGGGGTGGCTACAAAAAGATGCAGGTTCTTTAATGTTAGAGTGTGATGGTGGATGAGGCATTGGTGGCTAGAGAGGCATTGATGTTTGCTCAGACTTCAGTCTTAAGACATATTGCTTGCTATTAAAACTTCGTTTGTTGGTGAAAAGTTGGTTCAATAAGTTAGTCTTACCTATTTTTGAGCATGGGGCTTTCGATTCAGGATGTTCGGCTCCTCTTCTCCCCTGGAATTCAATTCTTTCTCATTTATCTTTGGTATTGTAACCTTGATCTTCAAGCTCATTCCATGCGAAGTCTGGATCTTTTCAGGAGTGGGATGTTTGTTGGGCTTCCTGCATTCTCAGTTGGTTGGATGCCCCATTTATTTCGCATAGTGCATTGGTTATGAATGCCTGTTTCTCCTACAGAAATTCAAATGAATATACTGTATTCACGTTGTATTTACTTTTTCTGAATAAAATGTCATCCTTTCTTTGTCTGGACGTGTTTCGTGTTATGTTGAACGGTATCATGAGATTTGCATTTGCAGCTTCTTTTCTGATAATATTTTTCTTGTTTTAAATTCTCAATGATGGTATGTTTTATTCGATTGCCAGTCTTATCAACCTGGATATACTGCACCACCTCGTTCTGAAGAAACTGCTATTGATATGGAGTAAGTTTAACTTTTTTGTTATTTGCAATTTGTGTGCGGATGGTTTTATCAATAATCATGTTTCTGCTGAACACCCACAAGCATTTTATTTTCATGCAATTTTTTGCACTTGCATTTGAAATATTGATCTGGATGTGGATATGCACAGGGGAAGATGGACTATTGCTGGTAACCCATTAGACCTGAGAGATACTCGGCTATTGGCCATTGCAGAGGCGGAACGGCATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGACAGTGGAGCTGCATTTTGTCGATCAGCTGCTCTTATTGTAGGTTTCCTAATTTTAGTTCTTTTGAACTCTTTTTTCCACCCTACAAGATGGAATGATATCGCACTTTTCACTCTTGTATTTTCCATGAAACTGTATGATGATTGATGAATTATTTGATTTGACGTGGCCAGCTATTAGCCCTTCTCCTTCTGCGGCATGCATTGACCATAACAGATCCTGACGGTGATGATGACGCATCTGCCTTTTTCTCTGTAAGCAGGCTAGAAATTTGTTCTCTTAAATTTGGAAGGAAAAATAATGTGTATAACCCGATGGGTTTTAATCTGGATGTGCCTTTGACAGATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATCATGGCCTGGGCCATTAGTATCTTGCAACGTCGAAGACAAAGACAGGTTGGTGATTAAGTACTTTGGTTGTATTTTTGAAATTTTGCTTTTAGAAACTGTTTTGCAGACTAGGTTTTGAAAGTTAAGAATGGTTTGGAAACTCTTATAGGTATATGTTGAAATTCTGTTGTTAAAGCAAATATGATGTGTTTAAATTCTGTATTCTCAAGTATATATATGATATTTTGGCATATATTGTAGAAATCAATTTGTGTAGGTTGGGTAGCTATATGAAGCCTGAAACATAATAAGAGAGAGTTGGAACATAATCAACTTTATAGAAAGACATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGTGTGGTTGTGAACCAACAGGAGGCAGCAGCACTGGCTGCAACACAAGTGGCGTTTGTACTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCACCCCTCACCCCTCATCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACACTGCTGTTTGAACCTCTACCAGTCATGTAATAATACTATAATTTTAAACATAAAAAAACTTTCTATTTTTCGCAGTCATTGCCAAGAATTTCCCCGAATTTTCGCTGCTGCAGTCTCTGGATTATTTTCTGTCTTCCAAACCCAGGTACCCTCACTAACAAACTTCTATAATTTCCATCCGTTTTGGGGCCAATATATTTTTTGTTCATATTATATTAAACCTATTCGGTGCTTCTTGGGAGCTAAGCAGAAAACCTCGTGCTGTGTATTATGTACATTTTATTTTAATATGAAAAACAAGGAAGATTTTTACAAGGAAAAGTAGGCGATTTCCTCATGTACCATCTTTCCTTCAGAGAATTTCCCGTTTCTTGTGCAATTTGTTGGCGATCTTAAGACTTTGGTATAGAATATTAGAATGTTAAATCCAAGTAGTTTTAGTGTTTTCTTTCTGAACTTATTTTTTTCTGGAGTTCATCAACATATTGCTGGTAAGATTATTAAAATGCATGTTAAAGGATGTTGAGTTTATGCCCAAACATGAAAGATTCATTTGACATGCAATTCAAGTATAACGCTGGTTTATAAAAATTCATTTAAAATCAAATCTCATTGTGCATCAACATTTATTGACTATTTTATCAATACTCATTTAACTTTCTTGCATGCATTTCAATTATAATATCTCACGAATAGTATTTGTTTCTATATAACGTGTAGGTCTCTAGATTTTTTGTTTTGGACCTATAATATTTTTAAATTGTCAATTTTACATCCACGTCTCCTTGCATATTTAAAAATTATTAATAATTTT

mRNA sequence

CTCCCCCCCCCCCCCCCCCTCAATTTCATCATCTCAATTTTTATCATCCTGTAATCCATCGATTCCTCTTTCTAGGGTTTCTTTCTTTTCTTGATTTGACCGCCTGTATTGGGTGTTTGGTTTTTCTGTGATATATAGGGTTTTGAGAACAATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCGACCAGTTGCTCCACTTCAACCTGTCTCCGACCCGGTTGATCCTCTTCCTTCTGCACCCCGTGAGCCTGTCGCGGACTCGCCTGCGCCTGCGGCTGGTCCTTCGTGTTCTACTGCAACTGCGGATGATCGGACGGAGCAGCAGGATGCACCCAATGAGGAGGAGCCTTTGATTCAGGCGGCCGAGTGCCGCATTTGTCAGGAAGAAGACAGCCTCAATAATTTAGAAACTCCCTGTGCATGTAGTGGTAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGCGAGATATGTCATCAGGAGATTGTTCCAACTCTGGGAGAAGAAGATGAGCAGCATGTCAATAGTTGGATTTCTCCTTCCTCATGCTCAACCAAAAGTAATGTTGGATACCATTTTGGATGTTCGATGTGTGGAGAAAGCTTGATGCTGATTATTGTTGGAGATGGTGGAGGATGTTCGGCTCCTCTTCTCCCCTGGAATTCAATTCTTTCTCATTTATCTTTGTCTTATCAACCTGGATATACTGCACCACCTCGTTCTGAAGAAACTGCTATTGATATGGAGGGAAGATGGACTATTGCTGGTAACCCATTAGACCTGAGAGATACTCGGCTATTGGCCATTGCAGAGGCGGAACGGCATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGACAGTGGAGCTGCATTTTGTCGATCAGCTGCTCTTATTCTATTAGCCCTTCTCCTTCTGCGGCATGCATTGACCATAACAGATCCTGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATCATGGCCTGGGCCATTAGTATCTTGCAACGTCGAAGACAAAGACAGGAGGCAGCAGCACTGGCTGCAACACAAGTGGCGTTTGTACTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCACCCCTCACCCCTCATCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACACTGCTGTTTGAACCTCTACCAGTCATGTAATAATACTATAATTTTAAACATAAAAAAACTTTCTATTTTTCGCAGTCATTGCCAAGAATTTCCCCGAATTTTCGCTGCTGCAGTCTCTGGATTATTTTCTGTCTTCCAAACCCAGGTACCCTCACTAACAAACTTCTATAATTTCCATCCGTTTTGGGGCCAATATATTTTTTGTTCATATTATATTAAACCTATTCGGTGCTTCTTGGGAGCTAAGCAGAAAACCTCGTGCTGTGTATTATGTACATTTTATTTTAATATGAAAAACAAGGAAGATTTTTACAAGGAAAAGTAGGCGATTTCCTCATGTACCATCTTTCCTTCAGAGAATTTCCCGTTTCTTGTGCAATTTGTTGGCGATCTTAAGACTTTGGTATAGAATATTAGAATGTTAAATCCAAGTAGTTTTAGTGTTTTCTTTCTGAACTTATTTTTTTCTGGAGTTCATCAACATATTGCTGGTAAGATTATTAAAATGCATGTTAAAGGATGTTGAGTTTATGCCCAAACATGAAAGATTCATTTGACATGCAATTCAAGTATAACGCTGGTTTATAAAAATTCATTTAAAATCAAATCTCATTGTGCATCAACATTTATTGACTATTTTATCAATACTCATTTAACTTTCTTGCATGCATTTCAATTATAATATCTCACGAATAGTATTTGTTTCTATATAACGTGTAGGTCTCTAGATTTTTTGTTTTGGACCTATAATATTTTTAAATTGTCAATTTTACATCCACGTCTCCTTGCATATTTAAAAATTATTAATAATTTT

Coding sequence (CDS)

ATGAGCGATCATCTCGTCCTGTATGTTGACCATTTGATTCGACCAGTTGCTCCACTTCAACCTGTCTCCGACCCGGTTGATCCTCTTCCTTCTGCACCCCGTGAGCCTGTCGCGGACTCGCCTGCGCCTGCGGCTGGTCCTTCGTGTTCTACTGCAACTGCGGATGATCGGACGGAGCAGCAGGATGCACCCAATGAGGAGGAGCCTTTGATTCAGGCGGCCGAGTGCCGCATTTGTCAGGAAGAAGACAGCCTCAATAATTTAGAAACTCCCTGTGCATGTAGTGGTAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAACTTGCGAGATATGTCATCAGGAGATTGTTCCAACTCTGGGAGAAGAAGATGAGCAGCATGTCAATAGTTGGATTTCTCCTTCCTCATGCTCAACCAAAAGTAATGTTGGATACCATTTTGGATGTTCGATGTGTGGAGAAAGCTTGATGCTGATTATTGTTGGAGATGGTGGAGGATGTTCGGCTCCTCTTCTCCCCTGGAATTCAATTCTTTCTCATTTATCTTTGTCTTATCAACCTGGATATACTGCACCACCTCGTTCTGAAGAAACTGCTATTGATATGGAGGGAAGATGGACTATTGCTGGTAACCCATTAGACCTGAGAGATACTCGGCTATTGGCCATTGCAGAGGCGGAACGGCATTTCTTGGAAGCTGAGTATGATGATTATGCTGCTTCAAATGACAGTGGAGCTGCATTTTGTCGATCAGCTGCTCTTATTCTATTAGCCCTTCTCCTTCTGCGGCATGCATTGACCATAACAGATCCTGACGGTGATGATGACGCATCTGCCTTTTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTTTTACCCTGCTACATCATGGCCTGGGCCATTAGTATCTTGCAACGTCGAAGACAAAGACAGGAGGCAGCAGCACTGGCTGCAACACAAGTGGCGTTTGTACTACAACATGGACAGCATAGAGGTTTACAATTTGCAATTGCATCAGCAGGACCACCCCTCACCCCTCATCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACACTGCTGTTTGA

Protein sequence

MSDHLVLYVDHLIRPVAPLQPVSDPVDPLPSAPREPVADSPAPAAGPSCSTATADDRTEQQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQEIVPTLGEEDEQHVNSWISPSSCSTKSNVGYHFGCSMCGESLMLIIVGDGGGCSAPLLPWNSILSHLSLSYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHPHPHPHPHPHTAV

Homology

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BLAST of Lsi11G009740 vs. Swiss-Prot
Match: MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 1


Query: 57  RTEQQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 116
           RT    +P  + P+     CRIC E  S  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 117 TCEICH 123
            CE+CH
Sbjct: 117 YCELCH 117

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BLAST of Lsi11G009740 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 1


Query: 57  RTEQQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 116
           RT    +P  + P+     CRIC E  S  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 117 TCEICH 123
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Lsi11G009740 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 1


Query: 57  RTEQQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 116
           RT    +P  + P+     CRIC E  S  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 117 TCEICH 123
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Lsi11G009740 vs. Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 1


Query: 57  RTEQQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDI 116
           RT    +P  + P+     CRIC E  S  +L +PC C+G+L   HR C++HW +     
Sbjct: 57  RTLATQSPFNDRPM-----CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTS 116

Query: 117 TCEICH 123
            CE+CH
Sbjct: 117 YCELCH 117

[Close]

BLAST of Lsi11G009740 vs. Swiss-Prot
Match: MARH3_XENTR (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.7e-07
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 1


Query: 76  CRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 123
           CRIC E  +  +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 69  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 115

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BLAST of Lsi11G009740 vs. TrEMBL
Match: A0A0A0LN28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100580 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90
Identity = 172/177 (97.18%), Postives = 174/177 (98.31%), Query Frame = 1


Query: 194 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDS 253
           YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEA+YDDYAASNDS
Sbjct: 124 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEADYDDYAASNDS 183

Query: 254 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISI 313
           GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYIMAWAISI
Sbjct: 184 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYIMAWAISI 243

Query: 314 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAG-PPLTPHPHPHPHPHPHPH 370
           LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS G PPLTPHPHPH HPHPHPH
Sbjct: 244 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPPPLTPHPHPHSHPHPHPH 300

[Close]

BLAST of Lsi11G009740 vs. TrEMBL
Match: A0A0D2NCL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141600 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 3.3e-77
Identity = 187/357 (52.38%), Postives = 207/357 (57.98%), Query Frame = 1


Query: 1   MSDHLVLYVDHLIRPVAPLQPVSDPVDPLPSAPREPVADSPAPAAGPSCSTATADDRTEQ 60
           MSDHLVLYVD L+RPV PLQPV   V P                +GPSCS        E 
Sbjct: 1   MSDHLVLYVDRLVRPV-PLQPVESEVGP------------STEISGPSCSPK----EKEI 60

Query: 61  QDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
                EEEPLIQ AECRICQEEDS+ NLETPCACSGSLKYAHRKCVQHWCNEKGDI CEI
Sbjct: 61  FRGGGEEEPLIQTAECRICQEEDSVENLETPCACSGSLKYAHRKCVQHWCNEKGDIICEI 120

Query: 121 CHQEIVPTLGEEDEQHVNSWISPSSCSTKSNVGYHFGCSMCGESLMLIIVGDGGGCSAPL 180
           CHQ   P            +I+PS   T+                    +  GGG     
Sbjct: 121 CHQPYQP-----------GYIAPSRPQTEETA-----------------IDIGGG----- 180

Query: 181 LPWNSILSHLSLSYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFL 240
             W    + + L   P   A   +E   ++ E                            
Sbjct: 181 --WTISGTPVDLR-DPRLLAIAEAERQILEAEY--------------------------- 240

Query: 241 EAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGF 300
               D+YAASN SGAAFCRSAALIL+ALLLLRHALT+ D D +DD S FFS+FLLRAAGF
Sbjct: 241 ----DEYAASNASGAAFCRSAALILMALLLLRHALTVPDADAEDDVSTFFSLFLLRAAGF 272

Query: 301 LLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPH 358
           LLPCYIMAWAISILQR+RQRQEAAALAATQVAFVLQ GQ RG+ F IAS GP +T H
Sbjct: 301 LLPCYIMAWAISILQRQRQRQEAAALAATQVAFVLQSGQRRGMHFTIAS-GPTMTTH 272

[Close]

BLAST of Lsi11G009740 vs. TrEMBL
Match: B9S8W6_RICCO (Membrane associated ring finger 1,8, putative OS=Ricinus communis GN=RCOM_0836410 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69
Identity = 141/170 (82.94%), Postives = 151/170 (88.82%), Query Frame = 1


Query: 194 YQPGYTAP---PRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 253
           YQPGYTAP   P++E+TAID+ G WTI+G PLDLRD RLLAIAEAERHFLEAEYD+YAAS
Sbjct: 114 YQPGYTAPLRPPQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAAS 173

Query: 254 NDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 313
           N SGAAFCRSAALIL+ALLLLRHALT+TD DGDDD S FFS+FLLRAAGFLLPCYIMAWA
Sbjct: 174 NASGAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWA 233

Query: 314 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHP 361
           ISILQRRRQRQEAAALAATQVAFVLQ GQHRGL F IAS GP +T H  P
Sbjct: 234 ISILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIAS-GPQVTAHQEP 282

[Close]

BLAST of Lsi11G009740 vs. TrEMBL
Match: A0A067L1Y9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15605 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 9.5e-69
Identity = 141/170 (82.94%), Postives = 150/170 (88.24%), Query Frame = 1


Query: 194 YQPGYTAPPR---SEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 253
           YQPGYTAPPR   +E+TAID+ G WTI+G PLDLRD RLLAIAEAERHFLEAEYD+YAAS
Sbjct: 116 YQPGYTAPPRPPRTEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAAS 175

Query: 254 NDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 313
           N SGAAFCRSAALIL+ALLLLRHALT+TD DGDDD S FFS+FLLRAAGFLLPCYIMAWA
Sbjct: 176 NASGAAFCRSAALILMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWA 235

Query: 314 ISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPHP 361
           ISILQRRRQRQEAAALAATQVAFVLQ GQ RGLQF IAS GP +  H  P
Sbjct: 236 ISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTIAS-GPHVAAHQEP 284

[Close]

BLAST of Lsi11G009740 vs. TrEMBL
Match: A0A061EI00_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_011709 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68
Identity = 140/166 (84.34%), Postives = 148/166 (89.16%), Query Frame = 1


Query: 194 YQPGYTAPPR--SEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 253
           YQPGYTAPPR  +EETAID+ G WTI+G PLDLRD RLLAIAEAER FLEAEYD+YAASN
Sbjct: 117 YQPGYTAPPRPHTEETAIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASN 176

Query: 254 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 313
            SGAAFCRSAALIL+ALLLLRHALT+ D DGDDD S FFS+FLLRAAGFLLPCYIMAWAI
Sbjct: 177 ASGAAFCRSAALILMALLLLRHALTVPDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAI 236

Query: 314 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPH 358
           SILQRRRQRQEAAALAATQVAFVLQ GQ RG+QF IAS GP  TPH
Sbjct: 237 SILQRRRQRQEAAALAATQVAFVLQSGQRRGMQFTIAS-GPAATPH 281

[Close]

BLAST of Lsi11G009740 vs. TAIR10
Match: AT3G47550.3 (AT3G47550.3 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51
Identity = 113/172 (65.70%), Postives = 133/172 (77.33%), Query Frame = 1


Query: 194 YQPGYTAPPRS--EETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 253
           YQ GYTAPP    +ET I +   W   G PLDL D R+LA+A AERHFLEA+YD+Y+ +N
Sbjct: 118 YQHGYTAPPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENN 177

Query: 254 DSGAAFCRSAALILLALLLLRHALTIT-DPDGDDDASAFFSIFLLRAAGFLLPCYIMAWA 313
            SGAAFCRSAALIL+ALLLLR AL +T +PD +DD +AFFS+FLLRAAGFLLPCYIMAWA
Sbjct: 178 SSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWA 237

Query: 314 ISILQRRRQRQEAAALAATQVAFVLQHG--QHRGLQFAIASAGPPLTPHPHP 361
           I ILQRRRQRQEAAALAA +V F++  G  Q RGL FA+A   PP++  P P
Sbjct: 238 IGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQ-PPISNVPTP 287

[Close]

BLAST of Lsi11G009740 vs. TAIR10
Match: AT5G62460.1 (AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-50
Identity = 115/185 (62.16%), Postives = 135/185 (72.97%), Query Frame = 1


Query: 193 SYQPGYTAPPR--SEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 252
           SYQPGYTAPP   +++T ID+   W   G  LDL D R+LA+A AERHF +A+YD+YA S
Sbjct: 126 SYQPGYTAPPPPPADDTIIDIGEDWG-NGVHLDLNDPRILAMAAAERHFFDADYDEYADS 185

Query: 253 NDSGAAFCRSAALILLALLLLRHALTITDPDGDD---DASAFFSIFLLRAAGFLLPCYIM 312
           N SGAAFCRSAALIL+ALLLLRHAL +T+ + DD   D SAFF +F+LRAAGFLLPCYIM
Sbjct: 186 NSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIM 245

Query: 313 AWAISILQRRRQRQEAAALAATQVAFVLQHG------QHRGLQFAIASAGPPLTPHPHPH 367
           AWAISILQRRRQRQEAAALAA +VAF+L  G      +  GL FA+    P L  +PH  
Sbjct: 246 AWAISILQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGGLHFAVP---PELISNPHHQ 305

[Close]

BLAST of Lsi11G009740 vs. TAIR10
Match: AT1G14260.1 (AT1G14260.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-44
Identity = 107/163 (65.64%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 184 NSILSHLSLSYQPGYTAPP---RSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFL 243
           N+I       YQ GYT+PP   +SEET ID+ G W I+G  LDL D RLLAIAEAER  L
Sbjct: 96  NTICEICHQPYQAGYTSPPPPPQSEETTIDIGGGWRISG--LDLDDPRLLAIAEAERQIL 155

Query: 244 EAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITD--PDGDDDASAFFSIFLLRAA 303
           E+EYDDY AS+ SGAAF RSAALIL+ LLLLRHALTI D     DDD S+  S+FLLRAA
Sbjct: 156 ESEYDDYTASDTSGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAA 215

Query: 304 GFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHR 342
            FLLPCYIMA AISIL RRRQRQEAA L AT+ A VL   Q R
Sbjct: 216 SFLLPCYIMASAISILHRRRQRQEAADL-ATRFALVLSSRQPR 255

[Close]

BLAST of Lsi11G009740 vs. TAIR10
Match: AT2G02960.5 (AT2G02960.5 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-30
Identity = 74/120 (61.67%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 194 YQPGYTAPP---RSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAAS 253
           YQPGYTAPP   + EET ID+ G WTI+G  LD+ D RLLAIAEAER +LE+EY +Y AS
Sbjct: 92  YQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTAS 151

Query: 254 NDSGAAFCRSAALILLALLLLRHALTIT-DPDG-DDDASAFFSIFLLRAAGFLLPCYIMA 309
           + SGAAFCRSAALIL+ALLLLRHALTIT D DG +DD S+  S+  L+   F    Y ++
Sbjct: 152 SASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSVSSLKLLPFFFFFYFLS 209

[Close]

BLAST of Lsi11G009740 vs. TAIR10
Match: AT2G01275.1 (AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-20
Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 1   MSDHLVLYVDHLIRPVAPLQPVSDPVDPLPSAPREPVADSPAPAAGPSCSTATADDRTEQ 60
           M DH VL VD LI         ++         R  +  +  P     C+    DD+T +
Sbjct: 1   MGDHFVLLVDRLI---------TESTIEAAIQSRNQMLQANIPVE--ECTIL--DDKTLE 60

Query: 61  QDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
                +    +  AECRIC +ED  +N+ETPC+CSGS+KYAHR+CVQ WCNEKGD TCEI
Sbjct: 61  MLRNGD----LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEI 110

Query: 121 CHQEIVP 128
           CHQE  P
Sbjct: 121 CHQEFKP 110

[Close]

BLAST of Lsi11G009740 vs. NCBI nr
Match: gi|449442293|ref|XP_004138916.1| (PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 2.8e-90
Identity = 172/177 (97.18%), Postives = 174/177 (98.31%), Query Frame = 1


Query: 194 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDS 253
           YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEA+YDDYAASNDS
Sbjct: 124 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEADYDDYAASNDS 183

Query: 254 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISI 313
           GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYIMAWAISI
Sbjct: 184 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYIMAWAISI 243

Query: 314 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAG-PPLTPHPHPHPHPHPHPH 370
           LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS G PPLTPHPHPH HPHPHPH
Sbjct: 244 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPPPLTPHPHPHSHPHPHPH 300

[Close]

BLAST of Lsi11G009740 vs. NCBI nr
Match: gi|659082185|ref|XP_008441710.1| (PREDICTED: uncharacterized protein LOC103485788 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 2.5e-86
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 194 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDS 253
           YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDS
Sbjct: 122 YQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDS 181

Query: 254 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAISI 313
           GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIF+LRAAGFLLPCYIMAWAISI
Sbjct: 182 GAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFMLRAAGFLLPCYIMAWAISI 241

Query: 314 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPHPH 360
           LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS GPPLTPHPH
Sbjct: 242 LQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASTGPPLTPHPH 287

[Close]

BLAST of Lsi11G009740 vs. NCBI nr
Match: gi|1021025666|gb|KZM83454.1| (hypothetical protein DCAR_031023 [Daucus carota subsp. sativus])

HSP 1 Score: 314.3 bits (804), Expect = 2.8e-82
Identity = 189/371 (50.94%), Postives = 228/371 (61.46%), Query Frame = 1


Query: 1   MSDHLVLYVDHLIRPVAPLQPVSDPVDPLPSAPREPVADSPAPAAGPSCSTATADDRTEQ 60
           M DHLV+ V+ L++P      +S  +D    +       SP+P    S S++      E+
Sbjct: 1   MGDHLVVDVNRLVKP-----EISSGIDERQHSL------SPSPLGKSSASSSAVVVSEER 60

Query: 61  QDAPNEEE-PLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCE 120
            D  N+EE PLI  AECRICQ+ED++ N+E PCACSGSLKYAHRKCVQHWCNEKGDITCE
Sbjct: 61  MDDANDEEAPLITMAECRICQDEDAITNMEAPCACSGSLKYAHRKCVQHWCNEKGDITCE 120

Query: 121 ICHQEIVPTLGEEDEQHVNSWISPSSCSTKSNVGYHFGCSMCGESLMLIIVGDGGGCSAP 180
           ICHQ                                  C  C  SL      +       
Sbjct: 121 ICHQ--------------------------------LNCYQCTLSLDFTSTSN------- 180

Query: 181 LLPWNSILSHLSLSYQPGYTAPPRS--EETAIDMEGRWTIAGNPLDLRDTRLLAIAEAER 240
               +  L+  + +YQPG+TAPPR   EET ID+ G W I+G PLDL D R+LAI+EAER
Sbjct: 181 ----DVYLAIDTQTYQPGFTAPPRPQPEETTIDIGGGWHISGTPLDLHDPRILAISEAER 240

Query: 241 HFLEAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRA 300
             LEAEYD+Y ++N SGA+F RSAALIL+ALLLLRHA+T+TD D D D S FF++FLLRA
Sbjct: 241 QILEAEYDEYNSTNASGASFFRSAALILMALLLLRHAVTVTDTDEDGDESNFFTLFLLRA 300

Query: 301 AGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIAS----AGPP 360
            GFLLPCYIMAWAISI+QRRRQRQEAAALAATQ A V+Q    RGL F +AS    A  P
Sbjct: 301 TGFLLPCYIMAWAISIMQRRRQRQEAAALAATQFALVIQSRTPRGLHFTLASSPALASSP 317

Query: 361 LTPHPHPHPHP 365
           +   P P   P
Sbjct: 361 VLASPRPLASP 317

[Close]

BLAST of Lsi11G009740 vs. NCBI nr
Match: gi|823157631|ref|XP_012478696.1| (PREDICTED: uncharacterized protein LOC105794197 [Gossypium raimondii])

HSP 1 Score: 297.0 bits (759), Expect = 4.7e-77
Identity = 187/357 (52.38%), Postives = 207/357 (57.98%), Query Frame = 1


Query: 1   MSDHLVLYVDHLIRPVAPLQPVSDPVDPLPSAPREPVADSPAPAAGPSCSTATADDRTEQ 60
           MSDHLVLYVD L+RPV PLQPV   V P                +GPSCS        E 
Sbjct: 1   MSDHLVLYVDRLVRPV-PLQPVESEVGP------------STEISGPSCSPK----EKEI 60

Query: 61  QDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEI 120
                EEEPLIQ AECRICQEEDS+ NLETPCACSGSLKYAHRKCVQHWCNEKGDI CEI
Sbjct: 61  FRGGGEEEPLIQTAECRICQEEDSVENLETPCACSGSLKYAHRKCVQHWCNEKGDIICEI 120

Query: 121 CHQEIVPTLGEEDEQHVNSWISPSSCSTKSNVGYHFGCSMCGESLMLIIVGDGGGCSAPL 180
           CHQ   P            +I+PS   T+                    +  GGG     
Sbjct: 121 CHQPYQP-----------GYIAPSRPQTEETA-----------------IDIGGG----- 180

Query: 181 LPWNSILSHLSLSYQPGYTAPPRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFL 240
             W    + + L   P   A   +E   ++ E                            
Sbjct: 181 --WTISGTPVDLR-DPRLLAIAEAERQILEAEY--------------------------- 240

Query: 241 EAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGF 300
               D+YAASN SGAAFCRSAALIL+ALLLLRHALT+ D D +DD S FFS+FLLRAAGF
Sbjct: 241 ----DEYAASNASGAAFCRSAALILMALLLLRHALTVPDADAEDDVSTFFSLFLLRAAGF 272

Query: 301 LLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGPPLTPH 358
           LLPCYIMAWAISILQR+RQRQEAAALAATQVAFVLQ GQ RG+ F IAS GP +T H
Sbjct: 301 LLPCYIMAWAISILQRQRQRQEAAALAATQVAFVLQSGQRRGMHFTIAS-GPTMTTH 272

[Close]

BLAST of Lsi11G009740 vs. NCBI nr
Match: gi|1012099276|ref|XP_015956925.1| (PREDICTED: uncharacterized protein LOC107481217 [Arachis duranensis])

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 184/365 (50.41%), Postives = 210/365 (57.53%), Query Frame = 1


Query: 1   MSDHLVLYVDHLIRPVAPLQPVSD-PVDPLPSAPREPVADSPAPAAGPSCSTATADDRTE 60
           MSDHLVLYVD L+RPV P++P++  P  P P  P  P+ + PA  AGPS S   A     
Sbjct: 1   MSDHLVLYVDRLVRPVVPVEPLAQHPAQPSPE-PEPPLDEPPAATAGPSDSAPRA----- 60

Query: 61  QQDAPNEEEPLIQAAECRICQEEDSLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCE 120
                               ++ED   + E P      L+ A                C 
Sbjct: 61  --------------------EDEDEEEDEEAPL-----LQMAE---------------CR 120

Query: 121 ICHQEIVPTLGEEDEQHVNSWISPSSCSTKSNVGYH----FGCSMCGESLMLIIVGDGGG 180
           IC          ++E  VN+  SP +CS      +       C   G+ +  I       
Sbjct: 121 IC----------QEEDTVNNLESPCACSGSLKYAHRKCVQHWCDEKGDIICEI------- 180

Query: 181 CSAPLLPWNSILSHLSLSYQPGYTAPP---RSEETAIDMEGRWTIAGNPLDLRDTRLLAI 240
           C  P              Y+PGYTAPP     EET ID+ G WTI+G PLDLRD RLLAI
Sbjct: 181 CHKP--------------YEPGYTAPPPRAHPEETTIDIGGGWTISGTPLDLRDPRLLAI 240

Query: 241 AEAERHFLEAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSI 300
           AEAER FLEAEYD YAASN SGAAFCRSAALIL+ALLLLRHAL +TD D DDD S FFS+
Sbjct: 241 AEAERQFLEAEYDGYAASNASGAAFCRSAALILMALLLLRHALAVTDEDADDDPSTFFSL 287

Query: 301 FLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASAGP 358
           FLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFV Q GQ RGLQFAIA  GP
Sbjct: 301 FLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVFQSGQRRGLQFAIA-PGP 287

The following BLAST results are available for this feature:

BLAST of Lsi11G009740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARH3_RAT	3.0e-07	37.88	E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1	[more]
MARH3_MOUSE	3.0e-07	37.88	E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1	[more]
MARH3_HUMAN	3.0e-07	37.88	E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1	[more]
MARH3_BOVIN	3.0e-07	37.88	E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1	[more]
MARH3_XENTR	6.7e-07	42.55	E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1	[more]

BLAST of Lsi11G009740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN28_CUCSA	2.0e-90	97.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100580 PE=4 SV=1	[more]
A0A0D2NCL2_GOSRA	3.3e-77	52.38	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G141600 PE=4 SV=1	[more]
B9S8W6_RICCO	2.5e-69	82.94	Membrane associated ring finger 1,8, putative OS=Ricinus communis GN=RCOM_083641...	[more]
A0A067L1Y9_JATCU	9.5e-69	82.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15605 PE=4 SV=1	[more]
A0A061EI00_THECC	1.2e-68	84.34	RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TC...	[more]

BLAST of Lsi11G009740 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47550.3	1.6e-51	65.70	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	2.3e-50	62.16	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	1.9e-44	65.64	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.5	2.7e-30	61.67	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	4.3e-20	44.09	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Lsi11G009740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442293\|ref\|XP_004138916.1\|	2.8e-90	97.18	PREDICTED: uncharacterized protein LOC101203306 [Cucumis sativus]	[more]
gi\|659082185\|ref\|XP_008441710.1\|	2.5e-86	98.80	PREDICTED: uncharacterized protein LOC103485788 [Cucumis melo]	[more]
gi\|1021025666\|gb\|KZM83454.1\|	2.8e-82	50.94	hypothetical protein DCAR_031023 [Daucus carota subsp. sativus]	[more]
gi\|823157631\|ref\|XP_012478696.1\|	4.7e-77	52.38	PREDICTED: uncharacterized protein LOC105794197 [Gossypium raimondii]	[more]
gi\|1012099276\|ref\|XP_015956925.1\|	2.3e-71	50.41	PREDICTED: uncharacterized protein LOC107481217 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR022143	DUF3675
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009740.1	Lsi11G009740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 76..121 score: 7.4
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 75..122 score: 5.2
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 68..128 score: 21
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 73..124 score: 3.6
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 196..311 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 230..250 scor
None	No IPR available	PANTHER	PTHR23012:SF73	SUBFAMILY NOT NAMED	coord: 183..356 score: 8.3E-135coord: 42..116 score: 8.3E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 74..125 score: 7.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G009740	Csa2G100580	Cucumber (Chinese Long) v2	culsiB098
Lsi11G009740	CSPI02G08260	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G009740	Cucsa.189560	Cucumber (Gy14) v1	cgylsiB324
Lsi11G009740	CmaCh05G008610	Cucurbita maxima (Rimu)	cmalsiB716
Lsi11G009740	CmaCh01G004760	Cucurbita maxima (Rimu)	cmalsiB404
Lsi11G009740	CmoCh01G005100	Cucurbita moschata (Rifu)	cmolsiB389
Lsi11G009740	MELO3C008547	Melon (DHL92) v3.5.1	lsimeB117
Lsi11G009740	ClCG11G007350	Watermelon (Charleston Gray)	lsiwcgB082
Lsi11G009740	MELO3C008547.2	Melon (DHL92) v3.6.1	lsimedB125
Lsi11G009740	Cla97C11G216000	Watermelon (97103) v2	lsiwmbB078
Lsi11G009740	Bhi06G000769	Wax gourd	lsiwgoB111
Lsi11G009740	Cp4.1LG02g12280	Cucurbita pepo (Zucchini)	cpelsiB437
Lsi11G009740	Cp4.1LG11g07190	Cucurbita pepo (Zucchini)	cpelsiB077
Lsi11G009740	CsGy2G008550	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G009740	Carg20422	Silver-seed gourd	carlsiB639
Lsi11G009740	CsaV3_2G010640	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G009740	Watermelon (97103) v2	lsiwmbB075
Lsi11G009740	Cucurbita moschata (Rifu)	cmolsiB703
Lsi11G009740	Watermelon (Charleston Gray)	lsiwcgB081
Lsi11G009740	Watermelon (97103) v1	lsiwmB113
Lsi11G009740	Watermelon (97103) v1	lsiwmB119
Lsi11G009740	Silver-seed gourd	carlsiB975