Lsi11G009730 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G009730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Myb family transcription factor family protein
Location	chr11 : 15600557 .. 15602775 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTCGTTTTTTTGAGATTCTCTCATCCTTTCAAGTCAAAGAAGAAAGAAAAATAATAATTAAAAAAGTTGGTATGAACGTAATATAATTAGGAAGCAATAAAATAGAAAGGAAAGAGTCACAGCTCATAAGCATATATTCCCTTCCAACATAACATTGCCCCACTTTGTCTCCTCCAGATATGGAGTGAGAACATCGGACATTGCAACAACCAAAACTCTCTTCATTTTATTTTTTAAATTTTTATCATCATATAAAGAGGACTAGGCTTCCTTGTTAGGATATTCAAAGAAATTTATATCATGAAATTGAATTATTCTATTTTCATTTTTTAAATAACCCATAAAACCCCATCATCATCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATCTAAACACCAGAAAAAAAGAATTATGCAGAATCATCAGCACATGAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTTCTGAGCTTCATCAAAGATTTGTTGAGGCTATCAATCATCTTGGTGGAGCAGATAGTTCAGTTTTTTCTTTTCTTTTCTATTCAATTTTAAACATCATTTCATTTTCTCTTTCTGTTTCATTAATTTTATTATTATTATTTTTTTAGAGGCCACACCTAAGAGCTTGATGAGAGTGATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCATTTACAGGTTTTTCCTTTCAATCAATTTCAATTCTATATCATAATTCATAAAATCCTCTTCTTTTTTTTCCTAACAAATTTTTATTATTTATTTTGTATCAGAAATTTAGGTTGGGAAAAAGCCAGCAGTCTGAAACCAATGCTCAACTCAAGCTAGAAGGTTATAATTCCCAATAAACTTAACCCATTAAATACACTTCACTTAACCCGTAGTTTTCCCTTCTGATTATTAATCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTGATTTTTTTCTTCTTCTTTGGTATTGACTTCAAAGAGATGCAGAGAAAAGGTGGGCATTTTGATGGGGAGGAAAACAAGGATAGAAGTCAAAATCATAACAAAACAGAGTAAAAGCTCCATCCTCTGTTTTGAATTTCCATTTGAAATGGCTTAGGCTTTGTTTTTTGTTTCACCCAAAACAGCAATGGGGTTTGAAAATAACCTTTTTTTTTTCATTATTTTGGGTTGATAATTGAAGGAGCATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAAAGAAAAAATGGGGATTTTATTTTATGATGAATCTGTGAATTATGGTGCTGAAAAGTTGGCATTTGATTGTAAAATGTGTACATGGGGGTATTGTACTATTGTATATAAGCCATGTTTCATTTCGTAAGTAAAAATTTCAAGGTAAACCCAATGTTAAAATACATTCTATGTTTATTAGCTAGCTAAACCATGCAAAGTTTCTAAATAAAATGAACTCGAAAGTGAAGAATTTTCCCGACAATTAGAGATGTCCATTTTCCCCACGGGATCCGACTCGCCCCGCTCGGGGCGGGGAATCCCCAATTACACGAGGAATGGGGGAGGGAGCGGGGAAAATTTTTTCCCCGTTGGCCAAACGGGGACGGGGAATGTATTCCCTGTCCCCGACCCCGGTCCTGCCCCGACTCCCT

mRNA sequence

TTTCTTTCGTTTTTTTGAGATTCTCTCATCCTTTCAAGTCAAAGAAGAAAGAAAAATAATAATTAAAAAAGTTGGTATGAACGTAATATAATTAGGAAGCAATAAAATAGAAAGGAAAGAGTCACAGCTCATAAGCATATATTCCCTTCCAACATAACATTGCCCCACTTTGTCTCCTCCAGATATGGAGTGAGAACATCGGACATTGCAACAACCAAAACTCTCTTCATTTTATTTTTTAAATTTTTATCATCATATAAAGAGGACTAGGCTTCCTTGTTAGGATATTCAAAGAAATTTATATCATGAAATTGAATTATTCTATTTTCATTTTTTAAATAACCCATAAAACCCCATCATCATCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATCTAAACACCAGAAAAAAAGAATTATGCAGAATCATCAGCACATGAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTTCTGAGCTTCATCAAAGATTTGTTGAGGCTATCAATCATCTTGGTGGAGCAGATAAGGCCACACCTAAGAGCTTGATGAGAGTGATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCATTTACAGAAATTTAGGTTGGGAAAAAGCCAGCAGTCTGAAACCAATGCTCAACTCAAGCTAGAAGAGATGCAGAGAAAAGGTGGGCATTTTGATGGGGAGGAAAACAAGGATAGAAGTCAAAATCATAACAAAACAGAGTAAAAGCTCCATCCTCTGTTTTGAATTTCCATTTGAAATGGCTTAGGCTTTGTTTTTTGTTTCACCCAAAACAGCAATGGGGTTTGAAAATAACCTTTTTTTTTTCATTATTTTGGGTTGATAATTGAAGGAGCATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAAAGAAAAAATGGGGATTTTATTTTATGATGAATCTGTGAATTATGGTGCTGAAAAGTTGGCATTTGATTGTAAAATGTGTACATGGGGGTATTGTACTATTGTATATAAGCCATGTTTCATTTCGTAAGTAAAAATTTCAAGGTAAACCCAATGTTAAAATACATTCTATGTTTATTAGCTAGCTAAACCATGCAAAGTTTCTAAATAAAATGAACTCGAAAGTGAAGAATTTTCCCGACAATTAGAGATGTCCATTTTCCCCACGGGATCCGACTCGCCCCGCTCGGGGCGGGGAATCCCCAATTACACGAGGAATGGGGGAGGGAGCGGGGAAAATTTTTTCCCCGTTGGCCAAACGGGGACGGGGAATGTATTCCCTGTCCCCGACCCCGGTCCTGCCCCGACTCCCT

Coding sequence (CDS)

ATGAAGATATCAGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGACTACAAGAGCAAATAGAGGTGCAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGCAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTATTCTGAAGCACTTGAAGAGGCCAAAGCAGAGCTCTCTCAATTAGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTTTATCAGAATTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTGGGAAGAAGAATGTGTTCCATGGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAAGAACAGAGCCGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAGTGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGAAGATACAGCAATTGGAATTGGATCACAGTTGATTGAGTTTCTTTAA

Protein sequence

MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAPITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLIEFL

Homology

[Close]

BLAST of Lsi11G009730 vs. Swiss-Prot
Match: PHL8_ARATH (Myb family transcription factor PHL8 OS=Arabidopsis thaliana GN=PHL8 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 88/199 (44.22%), Postives = 119/199 (59.80%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I+EAL+MQMEVQK+L EQIEVQRHLQ++IEAQGKYL++VL KAQ+T+AGY   +  ++
Sbjct: 136 LQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMD 195

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTE-----LNFKGIER--VGRRMCSMESSLTSS 120
            A+ ELS+LASMV+ GC S+S SELT   E     L +K  E   + +  CS+ESSLTSS
Sbjct: 196 FARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSS 255

Query: 121 ETSEEAPITKKRKGKEKE-----------KEQSRSVSEGDCKRLTVHK-----SDEEHEE 177
           ETSE    T     K  E           K + RS+++  C    + K      D+EH +
Sbjct: 256 ETSETKLDTDNNLNKSIELPLMEINSEVMKGKKRSINDVVCVEQPLMKRAFGVDDDEHLK 315

[Close]

BLAST of Lsi11G009730 vs. Swiss-Prot
Match: PHLA_ARATH (Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.3e-19
Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           + IS+AL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL+++L KAQET+      +  +E
Sbjct: 145 LPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIE 204

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
             KA+LS+L S VS+    SS  E  +   L+ + +++      S++S LTSSE +++AP
Sbjct: 205 ATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAP 264

[Close]

BLAST of Lsi11G009730 vs. Swiss-Prot
Match: PHL9_ARATH (Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.2e-18
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 3   ISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEA 62
           I EAL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL++VL KAQET+      +  +E A
Sbjct: 147 IGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA 206

Query: 63  KAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEE 119
           K +LS+L S VS+   +SS  E  +   L  + ++      CS+ES LTSSE +++
Sbjct: 207 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQK 262

[Close]

BLAST of Lsi11G009730 vs. Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.7e-14
Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +++EAL  QMEVQ+RL EQ+EVQR LQLRIEAQGKYL+++L KA + I         LE 
Sbjct: 135 QVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAGLEA 194

Query: 62  AKAELSQLA--SMVSSGCQSSSLSELTDSTELNFKGIERVG-----RRMCSMESSLTSSE 121
           A+ ELS+LA  + +++GCQ +  +   D+T++    +  +      +  CS ESSLTSS 
Sbjct: 195 AREELSELAIKASITNGCQGT--TSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLTSST 254

Query: 122 TSE--EAPITKKRK 127
                 A + KKR+
Sbjct: 255 VGSPVSAALMKKRQ 266

[Close]

BLAST of Lsi11G009730 vs. Swiss-Prot
Match: PHL2_ARATH (Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +++EAL  QMEVQ+RL +Q+EVQR LQLRIEAQGKYL+++L KA +           LE 
Sbjct: 139 QVTEALRAQMEVQRRLHDQLEVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAGLEA 198

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRM---------CSMESSLTS 121
           A+ ELS+LA  VS+  Q +S+     +  +    +  +   +         CS+ESSLTS
Sbjct: 199 AREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESSLTS 258

Query: 122 ---SETSEEAPITKKRKG 128
                +   A + K+++G
Sbjct: 259 ITHGSSISAASMKKRQRG 276

[Close]

BLAST of Lsi11G009730 vs. TrEMBL
Match: A0A0A0LJX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100560 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-59
Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 114 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 173

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSS LSELTDSTELNFKGIERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 174 EAKAELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAP 233

Query: 121 ITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           ITKKRKG  KEKE+S SV              EE +E RM+DLN     DTAIG  S+LI
Sbjct: 234 ITKKRKG--KEKEESSSVC-------------EEDKELRMMDLN-----DTAIGFESKLI 276

Query: 181 EFL 184
           +FL
Sbjct: 294 QFL 276

[Close]

BLAST of Lsi11G009730 vs. TrEMBL
Match: A0A067KYF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15618 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 94/196 (47.96%), Postives = 130/196 (66.33%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +I++AL+MQMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET++GY   S  +E 
Sbjct: 128 QIAQALQMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLSGYNSSSMGIEL 187

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRR--MCSMESSLTSSETSE-- 121
           AKAELS+L SMV++GC SSS+SELT+    + K  ER   R  +CSMESSLTSSE+S   
Sbjct: 188 AKAELSRLLSMVNNGCPSSSMSELTEVGVSSLKDTERKQMRGTICSMESSLTSSESSGRK 247

Query: 122 ------------EAPITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLND 181
                       E P+     G+ K++  S +VSEG C    + K     ++ R+ DLN 
Sbjct: 248 EEDMQLKQSASIEIPLIDIHPGEAKKRSCSSTVSEGICVEQPMAKRSRSGDQLRIFDLN- 307

[Close]

BLAST of Lsi11G009730 vs. TrEMBL
Match: W9SPH9_9ROSA (Myb family transcription factor APL OS=Morus notabilis GN=L484_015664 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-28
Identity = 84/139 (60.43%), Postives = 107/139 (76.98%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           +KI+EAL++QMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET+AGY   S  +E
Sbjct: 112 LKIAEALQLQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSMGVE 171

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIER--VGRRMCSMESSLTSSETSEE 120
            AK ELS+L +MV++GCQSSS SELT++ EL+ + IER  + R +CSMESSLTSSE+S  
Sbjct: 172 FAKTELSRLLNMVNTGCQSSSFSELTEARELSLEVIERRSMRRTICSMESSLTSSESSGR 231

Query: 121 APITKKRKGKEKEKEQSRS 138
                    KE+EK    S
Sbjct: 232 ---------KEEEKRPMNS 241

[Close]

BLAST of Lsi11G009730 vs. TrEMBL
Match: A0A067GW78_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017978mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 85/166 (51.20%), Postives = 118/166 (71.08%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I++AL++QMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET+AGY   S  +E
Sbjct: 82  LQIAQALQVQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSAGVE 141

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIER--VGRRMCSMESSLTSSETSEE 120
            AKAELSQL SMVS GC SSS+SELT++   + K  ER  +   +CSMESSLTSSE+S  
Sbjct: 142 LAKAELSQLVSMVSMGCPSSSVSELTEAGTSSLKDFERKQIRSTICSMESSLTSSESS-- 201

Query: 121 APITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLN 165
                   G+++EK+    + + D       KS++   E +++D++
Sbjct: 202 --------GRKEEKQPVNEIGDTD-----TCKSNKTTPELQLMDIH 232

[Close]

BLAST of Lsi11G009730 vs. TrEMBL
Match: A0A067GW74_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017978mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 85/166 (51.20%), Postives = 118/166 (71.08%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I++AL++QMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET+AGY   S  +E
Sbjct: 115 LQIAQALQVQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSAGVE 174

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIER--VGRRMCSMESSLTSSETSEE 120
            AKAELSQL SMVS GC SSS+SELT++   + K  ER  +   +CSMESSLTSSE+S  
Sbjct: 175 LAKAELSQLVSMVSMGCPSSSVSELTEAGTSSLKDFERKQIRSTICSMESSLTSSESS-- 234

Query: 121 APITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLN 165
                   G+++EK+    + + D       KS++   E +++D++
Sbjct: 235 --------GRKEEKQPVNEIGDTD-----TCKSNKTTPELQLMDIH 265

[Close]

BLAST of Lsi11G009730 vs. TAIR10
Match: AT1G69580.2 (AT1G69580.2 Homeodomain-like superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 5.7e-26
Identity = 88/199 (44.22%), Postives = 119/199 (59.80%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           ++I+EAL+MQMEVQK+L EQIEVQRHLQ++IEAQGKYL++VL KAQ+T+AGY   +  ++
Sbjct: 137 LQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMD 196

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTE-----LNFKGIER--VGRRMCSMESSLTSS 120
            A+ ELS+LASMV+ GC S+S SELT   E     L +K  E   + +  CS+ESSLTSS
Sbjct: 197 FARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSS 256

Query: 121 ETSEEAPITKKRKGKEKE-----------KEQSRSVSEGDCKRLTVHK-----SDEEHEE 177
           ETSE    T     K  E           K + RS+++  C    + K      D+EH +
Sbjct: 257 ETSETKLDTDNNLNKSIELPLMEINSEVMKGKKRSINDVVCVEQPLMKRAFGVDDDEHLK 316

[Close]

BLAST of Lsi11G009730 vs. TAIR10
Match: AT5G18240.1 (AT5G18240.1 myb-related protein 1)

HSP 1 Score: 95.1 bits (235), Expect = 4.7e-20
Identity = 58/120 (48.33%), Postives = 84/120 (70.00%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           + IS+AL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL+++L KAQET+      +  +E
Sbjct: 145 LPISDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIE 204

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
             KA+LS+L S VS+    SS  E  +   L+ + +++      S++S LTSSE +++AP
Sbjct: 205 ATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAP 264

[Close]

BLAST of Lsi11G009730 vs. TAIR10
Match: AT3G04030.3 (AT3G04030.3 Homeodomain-like superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 3   ISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEEA 62
           I EAL+MQ+EVQ+RL EQ+EVQRHLQLRIEAQGKYL++VL KAQET+      +  +E A
Sbjct: 147 IGEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAA 206

Query: 63  KAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEE 119
           K +LS+L S VS+   +SS  E  +   L  + ++      CS+ES LTSSE +++
Sbjct: 207 KVQLSELVSKVSAEYPNSSFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQK 262

[Close]

BLAST of Lsi11G009730 vs. TAIR10
Match: AT4G13640.2 (AT4G13640.2 Homeodomain-like superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 57/137 (41.61%), Postives = 83/137 (60.58%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQI---EVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEA 61
           +++EAL  QMEVQ+RL EQ+   +VQR LQLRIEAQGKYL+++L KA + I         
Sbjct: 135 QVTEALRAQMEVQRRLHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAIEEQAVAFAG 194

Query: 62  LEEAKAELSQLA--SMVSSGCQSSSLSELTDSTELNFKGIERVG-----RRMCSMESSLT 121
           LE A+ ELS+LA  + +++GCQ +  +   D+T++    +  +      +  CS ESSLT
Sbjct: 195 LEAAREELSELAIKASITNGCQGT--TSTFDTTKMMIPSLSELAVAIEHKNNCSAESSLT 254

Query: 122 SSETSE--EAPITKKRK 127
           SS       A + KKR+
Sbjct: 255 SSTVGSPVSAALMKKRQ 269

[Close]

BLAST of Lsi11G009730 vs. TAIR10
Match: AT3G24120.2 (AT3G24120.2 Homeodomain-like superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.9e-11
Identity = 52/141 (36.88%), Postives = 79/141 (56.03%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQI---EVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEA 61
           +++EAL  QMEVQ+RL +Q+   +VQR LQLRIEAQGKYL+++L KA +           
Sbjct: 139 QVTEALRAQMEVQRRLHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQAATFAG 198

Query: 62  LEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRM---------CSMESS 121
           LE A+ ELS+LA  VS+  Q +S+     +  +    +  +   +         CS+ESS
Sbjct: 199 LEAAREELSELAIKVSNSSQGTSVPYFDATKMMMMPSLSELAVAIDNKNNITTNCSVESS 258

Query: 122 LTS---SETSEEAPITKKRKG 128
           LTS     +   A + K+++G
Sbjct: 259 LTSITHGSSISAASMKKRQRG 279

[Close]

BLAST of Lsi11G009730 vs. NCBI nr
Match: gi|659082189|ref|XP_008441712.1| (PREDICTED: myb family transcription factor APL [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-59
Identity = 146/187 (78.07%), Postives = 158/187 (84.49%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 118 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 177

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERV--GRRMCSMESSLTSSETSEE 120
           EAKAELSQLASMVSSGCQSS LSELTDSTEL+FKG ERV  GRRMCS+ESSLTSSETSEE
Sbjct: 178 EAKAELSQLASMVSSGCQSSCLSELTDSTELSFKGTERVGSGRRMCSIESSLTSSETSEE 237

Query: 121 APITKKRK--GKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIG 180
           AP TKKRK  GKEKEKE+S SV E         + +EE EE RM+DLN     DTAIG G
Sbjct: 238 APTTKKRKGNGKEKEKEESSSVCE---------EEEEEEEELRMMDLN-----DTAIGFG 290

Query: 181 SQLIEFL 184
           S+LI+FL
Sbjct: 298 SKLIQFL 290

[Close]

BLAST of Lsi11G009730 vs. NCBI nr
Match: gi|449442291|ref|XP_004138915.1| (PREDICTED: myb family transcription factor APL [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59
Identity = 144/183 (78.69%), Postives = 154/183 (84.15%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           MKISEALEMQ++VQKRLQEQIEVQ+HLQL+IEAQGKYLK VLRKAQETIAGYGC SEALE
Sbjct: 114 MKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYLKIVLRKAQETIAGYGCCSEALE 173

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSMESSLTSSETSEEAP 120
           EAKAELSQLASMVSSGCQSS LSELTDSTELNFKGIERVGRRMCS+ESSLTSSETSEEAP
Sbjct: 174 EAKAELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAP 233

Query: 121 ITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLNDSQFEDTAIGIGSQLI 180
           ITKKRKG  KEKE+S SV              EE +E RM+DLN     DTAIG  S+LI
Sbjct: 234 ITKKRKG--KEKEESSSVC-------------EEDKELRMMDLN-----DTAIGFESKLI 276

Query: 181 EFL 184
           +FL
Sbjct: 294 QFL 276

[Close]

BLAST of Lsi11G009730 vs. NCBI nr
Match: gi|802566849|ref|XP_012067659.1| (PREDICTED: accessory gland protein Acp36DE [Jatropha curcas])

HSP 1 Score: 140.6 bits (353), Expect = 2.8e-30
Identity = 94/196 (47.96%), Postives = 130/196 (66.33%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +I++AL+MQMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET++GY   S  +E 
Sbjct: 128 QIAQALQMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLSGYNSSSMGIEL 187

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRR--MCSMESSLTSSETSE-- 121
           AKAELS+L SMV++GC SSS+SELT+    + K  ER   R  +CSMESSLTSSE+S   
Sbjct: 188 AKAELSRLLSMVNNGCPSSSMSELTEVGVSSLKDTERKQMRGTICSMESSLTSSESSGRK 247

Query: 122 ------------EAPITKKRKGKEKEKEQSRSVSEGDCKRLTVHKSDEEHEEFRMIDLND 181
                       E P+     G+ K++  S +VSEG C    + K     ++ R+ DLN 
Sbjct: 248 EEDMQLKQSASIEIPLIDIHPGEAKKRSCSSTVSEGICVEQPMAKRSRSGDQLRIFDLN- 307

[Close]

BLAST of Lsi11G009730 vs. NCBI nr
Match: gi|743782505|ref|XP_011017283.1| (PREDICTED: uncharacterized protein LOC105120679 [Populus euphratica])

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 2   KISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALEE 61
           +I++AL+MQMEVQ++L EQIEVQRHLQLRIEAQGKYL+TVL+KAQET+AGY   S  +E 
Sbjct: 124 QIAQALQMQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQTVLKKAQETLAGYNSSSMGIEL 183

Query: 62  AKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRR--MCSMESSLTSSETS 117
           AKAEL +LASMV+SGC SSS+SELT++     K IER   R  +CSMESSLTSSE+S
Sbjct: 184 AKAELCRLASMVNSGCPSSSISELTETGGSILKEIERTQMRNTVCSMESSLTSSESS 240

[Close]

BLAST of Lsi11G009730 vs. NCBI nr
Match: gi|703146000|ref|XP_010108678.1| (Myb family transcription factor APL [Morus notabilis])

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 84/139 (60.43%), Postives = 107/139 (76.98%), Query Frame = 1


Query: 1   MKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCYSEALE 60
           +KI+EAL++QMEVQ++L EQIEVQRHLQLRIEAQGKYL++VL+KAQET+AGY   S  +E
Sbjct: 112 LKIAEALQLQMEVQRKLHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYSSSSMGVE 171

Query: 61  EAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIER--VGRRMCSMESSLTSSETSEE 120
            AK ELS+L +MV++GCQSSS SELT++ EL+ + IER  + R +CSMESSLTSSE+S  
Sbjct: 172 FAKTELSRLLNMVNTGCQSSSFSELTEARELSLEVIERRSMRRTICSMESSLTSSESSGR 231

Query: 121 APITKKRKGKEKEKEQSRS 138
                    KE+EK    S
Sbjct: 232 ---------KEEEKRPMNS 241

The following BLAST results are available for this feature:

BLAST of Lsi11G009730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL8_ARATH	1.0e-24	44.22	Myb family transcription factor PHL8 OS=Arabidopsis thaliana GN=PHL8 PE=2 SV=1	[more]
PHLA_ARATH	8.3e-19	48.33	Myb-related protein 1 OS=Arabidopsis thaliana GN=MYR1 PE=1 SV=1	[more]
PHL9_ARATH	9.2e-18	50.86	Myb-related protein 2 OS=Arabidopsis thaliana GN=MYR2 PE=1 SV=1	[more]
PHL3_ARATH	4.7e-14	43.28	Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1	[more]
PHL2_ARATH	1.7e-11	38.41	Protein PHR1-LIKE 2 OS=Arabidopsis thaliana GN=PHL2 PE=1 SV=1	[more]

BLAST of Lsi11G009730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX4_CUCSA	1.5e-59	78.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100560 PE=4 SV=1	[more]
A0A067KYF8_JATCU	1.9e-30	47.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15618 PE=4 SV=1	[more]
W9SPH9_9ROSA	3.1e-28	60.43	Myb family transcription factor APL OS=Morus notabilis GN=L484_015664 PE=4 SV=1	[more]
A0A067GW78_CITSI	1.2e-27	51.20	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017978mg PE=4 SV=1	[more]
A0A067GW74_CITSI	1.2e-27	51.20	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017978mg PE=4 SV=1	[more]

BLAST of Lsi11G009730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69580.2	5.7e-26	44.22	Homeodomain-like superfamily protein	[more]
AT5G18240.1	4.7e-20	48.33	myb-related protein 1	[more]
AT3G04030.3	5.2e-19	50.86	Homeodomain-like superfamily protein	[more]
AT4G13640.2	2.5e-13	41.61	Homeodomain-like superfamily protein	[more]
AT3G24120.2	8.9e-11	36.88	Homeodomain-like superfamily protein	[more]

BLAST of Lsi11G009730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082189\|ref\|XP_008441712.1\|	1.3e-59	78.07	PREDICTED: myb family transcription factor APL [Cucumis melo]	[more]
gi\|449442291\|ref\|XP_004138915.1\|	2.2e-59	78.69	PREDICTED: myb family transcription factor APL [Cucumis sativus]	[more]
gi\|802566849\|ref\|XP_012067659.1\|	2.8e-30	47.96	PREDICTED: accessory gland protein Acp36DE [Jatropha curcas]	[more]
gi\|743782505\|ref\|XP_011017283.1\|	2.6e-28	68.38	PREDICTED: uncharacterized protein LOC105120679 [Populus euphratica]	[more]
gi\|703146000\|ref\|XP_010108678.1\|	4.4e-28	60.43	Myb family transcription factor APL [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025756	Myb_CC_LHEQLE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009730.1	Lsi11G009730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 1..48 score: 2.7
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 1..143 score: 8.6
None	No IPR available	PANTHER	PTHR31499:SF11	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 1..143 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G009730	Csa2G100560	Cucumber (Chinese Long) v2	culsiB098
Lsi11G009730	CSPI02G08250	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G009730	Cucsa.189550	Cucumber (Gy14) v1	cgylsiB324
Lsi11G009730	ClCG11G007240	Watermelon (Charleston Gray)	lsiwcgB086
Lsi11G009730	Bhi06G000772	Wax gourd	lsiwgoB111
Lsi11G009730	Cp4.1LG02g12250	Cucurbita pepo (Zucchini)	cpelsiB437
Lsi11G009730	Cp4.1LG11g07180	Cucurbita pepo (Zucchini)	cpelsiB077
Lsi11G009730	Carg20424	Silver-seed gourd	carlsiB639
Lsi11G009730	CsaV3_2G010620	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G009730	Cucurbita maxima (Rimu)	cmalsiB404
Lsi11G009730	Cucurbita maxima (Rimu)	cmalsiB716
Lsi11G009730	Cucurbita moschata (Rifu)	cmolsiB389
Lsi11G009730	Cucurbita moschata (Rifu)	cmolsiB703
Lsi11G009730	Melon (DHL92) v3.5.1	lsimeB117
Lsi11G009730	Watermelon (Charleston Gray)	lsiwcgB081
Lsi11G009730	Watermelon (Charleston Gray)	lsiwcgB082
Lsi11G009730	Watermelon (97103) v1	lsiwmB113
Lsi11G009730	Watermelon (97103) v1	lsiwmB119
Lsi11G009730	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G009730	Melon (DHL92) v3.6.1	lsimedB125
Lsi11G009730	Silver-seed gourd	carlsiB975
Lsi11G009730	Watermelon (97103) v2	lsiwmbB075
Lsi11G009730	Watermelon (97103) v2	lsiwmbB078