Lsi11G008540 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G008540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTATA box-binding protein associated factor RNA polymerase I subunit B-like protein
Locationchr11 : 10763298 .. 10768029 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAGAAAATTTGAAAATATATAAGATTTGGTATAAGTTGGAAAAAGTTATCTTTTTTAGGAAAATTTGTACGAATAACCCAAAAATTAGGAGAAAAATGTCAAATGACTGGAATCTTTGAAAAAAAATGTCAAATGAACCTTTTGTTGACGTCAAGATTCGATGAAATTACCAAAATGAACTCGCGCACGCAGAAAAATCCATCTGGCTCTCACTCTCTCGCTCTAACTCTCTTTTCTCACTCACAATCACTCTCATCTCTTGAAGCCCATCTCCTTCTTTCCTTCCTCTCCTCCTCTTCTCTTGAAGCCCATCTCCTTCTTTCCTCTCTTGAAGCCCAACGCAAAACTGCCTTTCCCACGTGTTTCAGTTCGGCCAGCACACCCTAAAACGGCGACGGTTGGCAGCGGCTTCTGGCGATTGAGCGATCCGAGACCCACGACCCGCGCCCGACGACCCCTTCGCACGGTGAACCACGGCAGAAAAGACAACCTACACAGCCCCTCCTCCGACGCGATCTTGCAGCGATAACCCGGTCTGCAGCGTTGTACGACGTCTCTTCCGGTGAAAAACAGTAAGCAGTGTGCTTCTCCCTTTTCGGCGAGGTTCGATAAAGACCCACTCTCGTTCGACCTCAGATTTGAGTTACCCACTTCTTGATGACTTCAAATATGCAGGATTAAGCTATTCGAGCACGTTCCAGCAAGAATTCGAGTTCCTTTAGGTAAGTTTCAGTGGGTAAAAGTGCTATAAACTCCTTTCGGACACATTTAAGTGTTGTAGCTTAACCTCTAACCTTTAGAACATCTGTCATTGTAGCTTCGGACTGATAGCGGACCTATTCCTATTCGGATACTTTTCTAGCAATGCTTTCCCCTTTCGACAGTTTTCAGTAAGGACCCACTTCCTTTCAACTTTAGTTTTGCATTGCCTATTACCTGACCACTTCTAATAATTAGGATTTGGGCGTTTTGGGCACAAACTAGCAAGTGTTGAGGCTGTTCGGCGGTGTTCAGTTGGTAATTAAGCGTTTTAAGCTTTTTAAAGCTCTTTTATGCTGTTTTAGATCCGTTCCTAACCCTTGGAATCTTCTGTTCAGTTGATTTAAACTAGTTCGAACCCATTTGGAAGCGCTTCGGACTCATTTGAACACTTTCCAGCAAAGTTCTAAGCCTGTTTGGTGTTTCTCAATAGGTAACACCTCACTTCCACCTTTTCGAATTCGTTTAAAGTACTGTAAACTAGTTTATAACTTTGGGGACTCTCTATTGTAATTTGAAACTAGGTTGGAGTGTTTGAATTAAGGCTTAAGATTATTTTTGGTTGGTTTATTCATTTTGGACACTCTTTGGACTCCGATTAAGGTTTTGAAATGAGATCCAAGATTGGAGTCTTGTTTTAATATTTCAAGAGTCTTTTGAATAATAGAACTTCATATAATAATTTTGATTGATAATCTTTTCCGACTTTTCTGTTTACATTTTACCTTCAAGATCTCGAATGGCAGACCCCTGCAACTTGTCTTGCTACAACTGTGGCAGCATTGGGCTTACAGACGGTTTTGATGGCTTCTTCTACTGCCTTCAGTGTGGTTCCCAGGCTGATGACATCATCGACACTGGTGTTGCCGATGAGGATTTGGCTGTAAGAGATGCTGGTAAATCCGGTGGCCCAATCTACTCACAATCTCACACGCGCCGCCGTATTCCAGCCGTGTTGAAGGTGGAAACCCTATCTCAGTCTCAACCACTTTTTGGTCCAAGTCAGTCTGAGTTCTGGGATAGCCTTAATTTAAAGGAAGACCCATATGGCAATGAAGCTCGAAAGGATGACGACGTTTTGATGTTAAATGATGGTGTCGGGCCTACTGGTCCAGAGGATTTCGGGTCTGGTGGTGTGCCATCTGTAAAACCAAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGGTATGTAATGGGGTTGCAGCTGATTATGGAGCTTCAATGTGAAGCTCTGGTGAAGGAATTCAAGGTGACCCCTGTAATTTGTGGGTTGGCAGCAAGCATTTGGTTGAGGTTTGTGACTGCTACACGGGTTTTTGATGAGGATTGGGCCTTTGAGACTGTCCAGGATTCTGAGAGCCAATGCCAAGGTTTGATAACTCGTTACTTCCACTAGAAGTTCTTGTTTATATTTGATTGCCCGTTAATCATTTTGATACTTGAAATTGAAATCTTTAGCTTTACATTTTCGAGTGGTACTTGTGGATGGGAGACTTTTAATGTATAGCTTTTTGTTTGATTATTTTAAACAGGGTGGATTCTAATGGTTGTCTTGAAAACTGAACTCATTCTTATTATTGCATTGTTCTTTTTAGCCTATAAAAATAAAATCGTTTGCATATTCAAATATCACAGTTTTTAGTCCGTATGGCCATACGTGATGCCTTTCTCCCAAGTTTTTTTTGTAACAGTACATCATTTTGTCTGACATCTTACAGTTTTGCAAGTACAATAAGATAACTCATTTATTCCTTTATGTAGTGTTGGTTGAGTTTTCTTAATTTGTTTTAAATATGTTTAACTGTTTTCACTATCTTAGTATTTTGAGTTTTTGTCGTATTTCTTGTTCATTTTAGTTGCAAACTGAATGTTCCTTCATTCAACAGATCCTGAACGCATTAGACGTGTTCGCTTTAGCGATAAAGACGAACCCCACAATTTGTATGGTCAACGGGTAGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATTTTGTACATTAGCTGTTTCATTTTTGGCTTGCCATGTTGCTCGGGAAGCAATTTTGCCAACAGACATAATAAAGTGGTCACTGGAGGGGAAACTTCCATATTATGCTGCTTTTATCGACATTGAAAATCGCATTGGGAAAACGTCAAACGCTTGTCCTATAAGTCCAAGGCATATGCATAGGCCCTCTCGAATTTCCTCGCAGCAGAAGTTAGAATCGTTGGCAGCATCAATAGCTCATACCATAGGGCTAAATCTTCCTCCAGTTAATTTTCATTCAATAGCATGTCGTTATCTCAACAAGCTAGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTATGGTTATCAACCAATGAATTGAGACTTCCCTCTCGTGTTTGTGTAATGTCAATTCTAATTATAGCAATGAGAATTCTGTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCTGTTAATTGTGCTTCATCTTTCCCACCAAACCAGAAGACGCATTCAAGTCCTGCTAATAATTTCAGTAACATGCAGGCTGATAGTGAAAACAGATCCGGATTCACTTCACATAATGTGGATAATCCATCTGTTTCCCCGAAGAACTCGCATCTGACTGTTACAGAGTTTCTTCACAAGATTGAAGCTCGGTATCATGAGATTGCTGAAACTTACGGTATGATTATGATTTCAGTATTATTGTATTTTTGAAGTTAGACCAACCTTAGTTATACATTTGCTTTACTAGATAAGAGTACTCTTCCTATTCCTGCTCACTTTTATTTCTTACTAACAGAATACTCTAAAGACTTGCCAACCTATCTTCAGTACTGTAAGGATGTCGTATTTGCTGGTTCAGAGTCGTTGTTTGTCGATGATCACGAGGAACAAAAGATGATCGAACAATTATGGAATTATTACCAGAATGAAACGGTAATGACCATCCTATCAAAAGCTAAAGTCATGTGCATAGATATTATGAAAAAAATTATATGATGAAGTTAGTCTATGTTGTGTGCGTAGATATCGAAAATAAAAATTGACTGGGAAATAATAGTTCTACTTTACAATATTACTTGCTTTTGTTGCTATGCAATGGGGATTTCATAACATTGCTATAATTGTTACCATATCAATGTTTAGTTGGAAAGCAACAATCATAATGCAAGCATAATTCCTAACTTGAAAAGAGAAAATTGTTACAGTATCCAGAACAAACAGAAGATGTGAATCAAAATGCTGCTTCCAATCAAAAGAGATTGAGGGAAGGTTCTAATGATCGATTATCCAACGATAGCAAGAAAGTTAGAGGCAAAGAAGAACGTATTAATGGCGAATCATCGAATAACAGAACTGGGTCAATTAATTCTCAGCAAAGTCATTCATCAAAAAGTTTGGAAAATAGTGACGATGATGAACTAGCCTCTGAAGACAAAGCAGCTTCCATAGATGGAGCAATCAGACGACTGAAACTTGACATGGAGGAGAAAAGGTTCTGCTACATTCCTCCAAGGGTTAAATCGACGAGATTCGATTACCTTCATTACTCGAGGAAGCTAGATGAGGGTGTGCTGACTTATGCTGCTCATGCCGATTACTACATATTGCTTCGTGCTTGTGCTAGAGCCGCAGAAGTTGATATTAGGATTATGCACATTGGAGTGTTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAAGACAGAATCCATAAGTCCCTCCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATCATGTTGACTCCACTGGACTGTCATATTTGGATATTTAAGTGATTTATATAACTACTACTTCCTATTTTGTTCTCGATTTTATGATATTAATCTCTTTTTTTGTTTTAATGAAAATTGATATAACATTTAGAAGTAGAAATTCTTAGATTTTAAACTTATTTTGCTTTTAGAAAAA

mRNA sequence

TTTAGAAAATTTGAAAATATATAAGATTTGGTATAAGTTGGAAAAAGTTATCTTTTTTAGGAAAATTTGTACGAATAACCCAAAAATTAGGAGAAAAATGTCAAATGACTGGAATCTTTGAAAAAAAATGTCAAATGAACCTTTTGTTGACGTCAAGATTCGATGAAATTACCAAAATGAACTCGCGCACGCAGAAAAATCCATCTGGCTCTCACTCTCTCGCTCTAACTCTCTTTTCTCACTCACAATCACTCTCATCTCTTGAAGCCCATCTCCTTCTTTCCTTCCTCTCCTCCTCTTCTCTTGAAGCCCATCTCCTTCTTTCCTCTCTTGAAGCCCAACGCAAAACTGCCTTTCCCACGTGTTTCAGTTCGGCCAGCACACCCTAAAACGGCGACGGTTGGCAGCGGCTTCTGGCGATTGAGCGATCCGAGACCCACGACCCGCGCCCGACGACCCCTTCGCACGGTGAACCACGGCAGAAAAGACAACCTACACAGCCCCTCCTCCGACGCGATCTTGCAGCGATAACCCGGTCTGCAGCGTTGTACGACGTCTCTTCCGGTGAAAAACAGTAAGCAGTGTGCTTCTCCCTTTTCGGCGAGGATTAAGCTATTCGAGCACGTTCCAGCAAGAATTCGAGTTCCTTTAGCTTCGGACTGATAGCGGACCTATTCCTATTCGGATACTTTTCTAGCAATGCTTTCCCCTTTCGACAGTTTTCAGATTTGGGCGTTTTGGGCACAAACTAGCAAGTGTTGAGGCTGTTCGGCGGTGTTCAGTTGTTGATTTAAACTAGTTCGAACCCATTTGGAAGCGCTTCGGACTCATTTGAACACTTTCCAGCAAAGTTCTAAGCCTGTTTGGTGTTTCTCAATAGATCTCGAATGGCAGACCCCTGCAACTTGTCTTGCTACAACTGTGGCAGCATTGGGCTTACAGACGGTTTTGATGGCTTCTTCTACTGCCTTCAGTGTGGTTCCCAGGCTGATGACATCATCGACACTGGTGTTGCCGATGAGGATTTGGCTGTAAGAGATGCTGGTAAATCCGGTGGCCCAATCTACTCACAATCTCACACGCGCCGCCGTATTCCAGCCGTGTTGAAGGTGGAAACCCTATCTCAGTCTCAACCACTTTTTGGTCCAAGTCAGTCTGAGTTCTGGGATAGCCTTAATTTAAAGGAAGACCCATATGGCAATGAAGCTCGAAAGGATGACGACGTTTTGATGTTAAATGATGGTGTCGGGCCTACTGGTCCAGAGGATTTCGGGTCTGGTGGTGTGCCATCTGTAAAACCAAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGGTATGTAATGGGGTTGCAGCTGATTATGGAGCTTCAATGTGAAGCTCTGGTGAAGGAATTCAAGGTGACCCCTGTAATTTGTGGGTTGGCAGCAAGCATTTGGTTGAGGTTTGTGACTGCTACACGGGTTTTTGATGAGGATTGGGCCTTTGAGACTGTCCAGGATTCTGAGAGCCAATGCCAAGATCCTGAACGCATTAGACGTGTTCGCTTTAGCGATAAAGACGAACCCCACAATTTGTATGGTCAACGGGTAGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATTTTGTACATTAGCTGTTTCATTTTTGGCTTGCCATGTTGCTCGGGAAGCAATTTTGCCAACAGACATAATAAAGTGGTCACTGGAGGGGAAACTTCCATATTATGCTGCTTTTATCGACATTGAAAATCGCATTGGGAAAACGTCAAACGCTTGTCCTATAAGTCCAAGGCATATGCATAGGCCCTCTCGAATTTCCTCGCAGCAGAAGTTAGAATCGTTGGCAGCATCAATAGCTCATACCATAGGGCTAAATCTTCCTCCAGTTAATTTTCATTCAATAGCATGTCGTTATCTCAACAAGCTAGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTATGGTTATCAACCAATGAATTGAGACTTCCCTCTCGTGTTTGTGTAATGTCAATTCTAATTATAGCAATGAGAATTCTGTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCTGTTAATTGTGCTTCATCTTTCCCACCAAACCAGAAGACGCATTCAAGTCCTGCTAATAATTTCAGTAACATGCAGGCTGATAGTGAAAACAGATCCGGATTCACTTCACATAATGTGGATAATCCATCTGTTTCCCCGAAGAACTCGCATCTGACTGTTACAGAGTTTCTTCACAAGATTGAAGCTCGGTATCATGAGATTGCTGAAACTTACGGTATGATTATGATTTCAACCAACCTTAGTTATACATTTGCTTTACTAGATAAGAGTACTCTTCCTATTCCTGCTCACTTTTATTTCTTACTAACAGAATACTCTAAAGACTTGCCAACCTATCTTCAGTACTGTAAGGATGTCGTATTTGCTGGTTCAGAGTCGTTGTTTGTCGATGATCACGAGGAACAAAAGATGATCGAACAATTATGGAATTATTACCAGAATGAAACGTATCCAGAACAAACAGAAGATGTGAATCAAAATGCTGCTTCCAATCAAAAGAGATTGAGGGAAGGTTCTAATGATCGATTATCCAACGATAGCAAGAAAGTTAGAGGCAAAGAAGAACGTATTAATGGCGAATCATCGAATAACAGAACTGGGTCAATTAATTCTCAGCAAAGTCATTCATCAAAAAGTTTGGAAAATAGTGACGATGATGAACTAGCCTCTGAAGACAAAGCAGCTTCCATAGATGGAGCAATCAGACGACTGAAACTTGACATGGAGGAGAAAAGGTTCTGCTACATTCCTCCAAGGGTTAAATCGACGAGATTCGATTACCTTCATTACTCGAGGAAGCTAGATGAGGGTGTGCTGACTTATGCTGCTCATGCCGATTACTACATATTGCTTCGTGCTTGTGCTAGAGCCGCAGAAGTTGATATTAGGATTATGCACATTGGAGTGTTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAAGACAGAATCCATAAGTCCCTCCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATCATGTTGACTCCACTGGACTGTCATATTTGGATATTTAAGTGATTTATATAACTACTACTTCCTATTTTGTTCTCGATTTTATGATATTAATCTCTTTTTTTGTTTTAATGAAAATTGATATAACATTTAGAAGTAGAAATTCTTAGATTTTAAACTTATTTTGCTTTTAGAAAAA

Coding sequence (CDS)

ATGGCAGACCCCTGCAACTTGTCTTGCTACAACTGTGGCAGCATTGGGCTTACAGACGGTTTTGATGGCTTCTTCTACTGCCTTCAGTGTGGTTCCCAGGCTGATGACATCATCGACACTGGTGTTGCCGATGAGGATTTGGCTGTAAGAGATGCTGGTAAATCCGGTGGCCCAATCTACTCACAATCTCACACGCGCCGCCGTATTCCAGCCGTGTTGAAGGTGGAAACCCTATCTCAGTCTCAACCACTTTTTGGTCCAAGTCAGTCTGAGTTCTGGGATAGCCTTAATTTAAAGGAAGACCCATATGGCAATGAAGCTCGAAAGGATGACGACGTTTTGATGTTAAATGATGGTGTCGGGCCTACTGGTCCAGAGGATTTCGGGTCTGGTGGTGTGCCATCTGTAAAACCAAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGGTATGTAATGGGGTTGCAGCTGATTATGGAGCTTCAATGTGAAGCTCTGGTGAAGGAATTCAAGGTGACCCCTGTAATTTGTGGGTTGGCAGCAAGCATTTGGTTGAGGTTTGTGACTGCTACACGGGTTTTTGATGAGGATTGGGCCTTTGAGACTGTCCAGGATTCTGAGAGCCAATGCCAAGATCCTGAACGCATTAGACGTGTTCGCTTTAGCGATAAAGACGAACCCCACAATTTGTATGGTCAACGGGTAGTAGTTGTATGGGTTAAATCTTTAAGAAAGAAGATACCATTATTTTGTACATTAGCTGTTTCATTTTTGGCTTGCCATGTTGCTCGGGAAGCAATTTTGCCAACAGACATAATAAAGTGGTCACTGGAGGGGAAACTTCCATATTATGCTGCTTTTATCGACATTGAAAATCGCATTGGGAAAACGTCAAACGCTTGTCCTATAAGTCCAAGGCATATGCATAGGCCCTCTCGAATTTCCTCGCAGCAGAAGTTAGAATCGTTGGCAGCATCAATAGCTCATACCATAGGGCTAAATCTTCCTCCAGTTAATTTTCATTCAATAGCATGTCGTTATCTCAACAAGCTAGCCCTTCCTGTTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTATGGTTATCAACCAATGAATTGAGACTTCCCTCTCGTGTTTGTGTAATGTCAATTCTAATTATAGCAATGAGAATTCTGTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCTGTTAATTGTGCTTCATCTTTCCCACCAAACCAGAAGACGCATTCAAGTCCTGCTAATAATTTCAGTAACATGCAGGCTGATAGTGAAAACAGATCCGGATTCACTTCACATAATGTGGATAATCCATCTGTTTCCCCGAAGAACTCGCATCTGACTGTTACAGAGTTTCTTCACAAGATTGAAGCTCGGTATCATGAGATTGCTGAAACTTACGGTATGATTATGATTTCAACCAACCTTAGTTATACATTTGCTTTACTAGATAAGAGTACTCTTCCTATTCCTGCTCACTTTTATTTCTTACTAACAGAATACTCTAAAGACTTGCCAACCTATCTTCAGTACTGTAAGGATGTCGTATTTGCTGGTTCAGAGTCGTTGTTTGTCGATGATCACGAGGAACAAAAGATGATCGAACAATTATGGAATTATTACCAGAATGAAACGTATCCAGAACAAACAGAAGATGTGAATCAAAATGCTGCTTCCAATCAAAAGAGATTGAGGGAAGGTTCTAATGATCGATTATCCAACGATAGCAAGAAAGTTAGAGGCAAAGAAGAACGTATTAATGGCGAATCATCGAATAACAGAACTGGGTCAATTAATTCTCAGCAAAGTCATTCATCAAAAAGTTTGGAAAATAGTGACGATGATGAACTAGCCTCTGAAGACAAAGCAGCTTCCATAGATGGAGCAATCAGACGACTGAAACTTGACATGGAGGAGAAAAGGTTCTGCTACATTCCTCCAAGGGTTAAATCGACGAGATTCGATTACCTTCATTACTCGAGGAAGCTAGATGAGGGTGTGCTGACTTATGCTGCTCATGCCGATTACTACATATTGCTTCGTGCTTGTGCTAGAGCCGCAGAAGTTGATATTAGGATTATGCACATTGGAGTGTTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAAGACAGAATCCATAAGTCCCTCCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATCATGTTGACTCCACTGGACTGTCATATTTGGATATTTAA

Protein sequence

MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIYSQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLNDGVGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLAASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVVFAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAASNQKRLREGSNDRLSNDSKKVRGKEERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASIDGAIRRLKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIRIMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCSDHVDSTGLSYLDI
Homology
[Close]
BLAST of Lsi11G008540 vs. Swiss-Prot
Match: TAF1B_ORYSI (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. indica GN=OsI_19584 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.8e-91
Identity = 222/620 (35.81%), Postives = 326/620 (52.58%), Query Frame = 1 

Query: 122 PTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLAA 181
           P+ P DF +G      P  E+ A  VR RYV GLQ+I++ Q EALV+  +V  +   LA 
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165

Query: 182 SIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQR------V 241
           +IWLR+V A++VFDE W  + +  + S       +     + KD+   L G         
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSY 225

Query: 242 VVVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIG 301
             ++++SLR  +P++ TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  ++  +G
Sbjct: 226 EFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 285

Query: 302 KTSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPV 361
            + N CP+S R + RP+R+    +LE+ A SIA  IGL LP VNF+ IA R+L +L+LP+
Sbjct: 286 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 345

Query: 362 DKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSV 421
           +KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE     
Sbjct: 346 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESI--- 405

Query: 422 NCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIE 481
                                   A +EN  G         S+ P +++           
Sbjct: 406 ------------------------AQTENAVGSDPEASAPHSIEPDSNN----------- 465

Query: 482 ARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVVF 541
                 +E +    +   L+ ++  +D               +YSK++ +YL+YCKDVVF
Sbjct: 466 ------SEEFDARELLCTLAASYDKIDVGH------------DYSKEVHSYLKYCKDVVF 525

Query: 542 AGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAASNQKRLREGSNDRLSNDSK 601
            G         EE+ +I+  W+ Y+     ++   +++NA   Q++LR       + +  
Sbjct: 526 TG----MTFSLEEEHLIDIFWDMYKG----KEVMLLDENAKLCQEKLR-------TTNGV 585

Query: 602 KVRGKEERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASIDGAIRRLKLDM 661
             R ++ R       +      + QS  SK  EN                          
Sbjct: 586 NKRCRDGRFADTKCCSTPLGNCALQSIKSKMEENG------------------------- 616

Query: 662 EEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIRIMHIG 721
               FCY+ PR +     YL Y+R+   G L Y AHADYYILLR  A+ AEVD+R++H  
Sbjct: 646 ----FCYVSPRKRLVSDGYLLYTRRESSGSLIYVAHADYYILLRPFAKLAEVDVRVLHSS 616

Query: 722 VLSLEKRLSWLEDRIHKSLH 736
           VL LE+RL W+E+R+ +SL+
Sbjct: 706 VLKLERRLGWIEERVGRSLN 616

[Close]
BLAST of Lsi11G008540 vs. Swiss-Prot
Match: MEE12_ARATH (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabidopsis thaliana GN=MEE12 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-88
Identity = 193/484 (39.88%), Postives = 275/484 (56.82%), Query Frame = 1 

Query: 9   CYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DL + + G + G +Y+  H R  
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDL-IGEGGGTQGALYNPKHRR-- 62

Query: 69  IPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGN-----EARKDDDVLMLNDGVGPT 128
                + + ++ SQP F    S +    +  E   GN     E ++  D  +  +   PT
Sbjct: 63  ----TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE---PT 122

Query: 129 GPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLAASI 188
            P DF +  +     S+E Y DE R RYV    +++  QC+ALV +F VTP+I GL   I
Sbjct: 123 EPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPI 182

Query: 189 WLRFVTATRVFDEDWAFETVQDSESQCQDPE-----RIRRVRFSDKDEPHNLYGQRVVVV 248
            LR+V  + V+ +DWA   ++DSE Q +D E     R++R     K EP N+ G+R V +
Sbjct: 183 SLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKR----HKAEPRNIDGKRAVTI 242

Query: 249 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTS 308
           W   L+K +PL  +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI  ++G+ S
Sbjct: 243 WFGILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERS 302

Query: 309 NACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 368
            ACP+    M RP ++ S Q LE+ A+ IA TIGL LPPVNF+ IA  Y+ +L++P DKI
Sbjct: 303 AACPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKI 362

Query: 369 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCA 428
           L  A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL    A
Sbjct: 363 LDLARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNA 422

Query: 429 SSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARY 483
           S                     DSE  SG           + K +     E L  +EA+Y
Sbjct: 423 S-------------------DGDSETNSG----------TAEKATEFDTQELLKNLEAKY 438

[Close]
BLAST of Lsi11G008540 vs. Swiss-Prot
Match: TAF1B_ORYSJ (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. japonica GN=Os05g0352700 PE=3 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 2.2e-73
Identity = 173/458 (37.77%), Postives = 243/458 (53.06%), Query Frame = 1 

Query: 6   NLSCYNCG---SIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIYSQ 65
           +L C  CG        D  DGFF C QC +      +T     D  +        P +  
Sbjct: 18  HLVCEYCGHGSEYAEDDADDGFFTCRQCSAIHTSTQNTATNPFDFPMT-------PAHLS 77

Query: 66  SHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLNDGVGP 125
           +H R   P        +      G +  +F        D  G                 P
Sbjct: 78  AHRRPTQPTPTPKPFPAPRGAATGAAAPDF--------DDLGE----------------P 137

Query: 126 TGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLAAS 185
           + P DF +G      P  E+ A  VR RYV GLQ+I++ Q EALV+  +V  +   LA +
Sbjct: 138 SEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAGT 197

Query: 186 IWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQR------VV 245
           IWLR+V A++VFDE W  + +  + S       +     + KD+   L G          
Sbjct: 198 IWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSYE 257

Query: 246 VVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGK 305
            ++++SLR  +P++ TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  ++  +G 
Sbjct: 258 FLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLGS 317

Query: 306 TSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVD 365
           + N CP+S R + RP+R+    +LE+ A SIA  IGL LP VNF+ IA R+L +L+LP++
Sbjct: 318 SLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPIE 377

Query: 366 KILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEK-SLSV 425
           KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + + 
Sbjct: 378 KILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQTE 427

Query: 426 NCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNV 454
           N   S P     HS        ++ DS N   F +  +
Sbjct: 438 NAVGSDPEASAPHS--------IEPDSNNSEEFDAREL 427

[Close]
BLAST of Lsi11G008540 vs. TrEMBL
Match: A0A0A0LHI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074100 PE=4 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 639/767 (83.31%), Postives = 676/767 (88.14%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           MADP NLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVA+EDL +RD GKSG PIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLNDGV 120
           SQSHTRRR P VLKVE LSQSQ LFG SQSEFWDSLNL EDP GN   KD D++MLNDGV
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLNDGV 120

Query: 121 GPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLA 180
           GPTGPEDFGSG V S KPSFEEYADEVRMRYVMGLQLIMELQCE LVKEFK TP+ICGLA
Sbjct: 121 GPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICGLA 180

Query: 181 ASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVWV 240
           ASIWLRFVTATRVFDEDWAF+TVQ+SESQC DPERIRRV  S KDEPHN YGQRVVV+WV
Sbjct: 181 ASIWLRFVTATRVFDEDWAFQTVQESESQCLDPERIRRVCSSHKDEPHNFYGQRVVVLWV 240

Query: 241 KSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSNA 300
           KSLRKKIPLF TLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAF+DIE+RIGKTS A
Sbjct: 241 KSLRKKIPLFSTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTSRA 300

Query: 301 CPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360
           CPIS + MHRPSRISS QKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP
Sbjct: 301 CPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360

Query: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCASS 420
           HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSV+CAS 
Sbjct: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVDCASC 420

Query: 421 FPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARYHE 480
           FPP+QKTHSSPANNFSNMQADSENR GFTSH+VDNPSVSP+N HLT TEFL KIEARYHE
Sbjct: 421 FPPHQKTHSSPANNFSNMQADSENRPGFTSHDVDNPSVSPENPHLTTTEFLRKIEARYHE 480

Query: 481 IAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVVFAGSES 540
           IAETY                                EYSKDLPTYLQYCKDV FAGSES
Sbjct: 481 IAETY--------------------------------EYSKDLPTYLQYCKDVAFAGSES 540

Query: 541 LFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAASNQKRLREGSNDRLSNDSKKVRGK 600
           LF+DDH+EQKMIE+LWNYYQNE   +QTEDV+QNAASNQKRLREGSNDRLSN+SKKV+G+
Sbjct: 541 LFIDDHDEQKMIEKLWNYYQNEKDYDQTEDVDQNAASNQKRLREGSNDRLSNESKKVKGE 600

Query: 601 EERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAA----SIDGAIRRLKLDME 660
           E+RI+ ES NNRTGSI+S+QSHSSKSL+NSDDDE +S DKAA    SI+ AIR+LKLDME
Sbjct: 601 EDRISRESLNNRTGSIDSRQSHSSKSLDNSDDDEQSSVDKAASSLTSINEAIRQLKLDME 660

Query: 661 EKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIRIMHIGV 720
           EKRFCYIPPR+   RFDYLHYSRK+DEG LTYAAHADYYILLRACARAA+VDIRIMHIGV
Sbjct: 661 EKRFCYIPPRINPKRFDYLHYSRKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGV 720

Query: 721 LSLEKRLSWLEDRIHKSLHLTPSSVSCEFCS---DHVDSTGLSYLDI 761
           LSLEKRLSWLEDRIHKSL LTP+S++CEFCS   DHV S GLS LDI
Sbjct: 721 LSLEKRLSWLEDRIHKSLRLTPTSITCEFCSDVPDHVGSVGLSDLDI 735

[Close]
BLAST of Lsi11G008540 vs. TrEMBL
Match: W9QI88_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001445 PE=4 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 1.6e-195
Identity = 393/799 (49.19%), Postives = 513/799 (64.21%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M+DP   +C+ CG+ G  DGFDGF+YCL+CGSQA+DII+TGVADED A +  G +G P+Y
Sbjct: 1   MSDPHAWTCHTCGNAGFADGFDGFYYCLRCGSQAEDIIETGVADEDFADK-GGTAGAPLY 60

Query: 61  SQSHTRRRIPAV--LKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLN- 120
           S +H R R  A   +K E +SQ Q      QS+FW +L L +D  G    + +   +   
Sbjct: 61  SATHRRNRPVAASAIKAEPISQVQS--ATLQSQFWAALTLDDDGEGEGGDRFNRASIKTE 120

Query: 121 ----DGVGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVT 180
               DGVGPTGP DFGS G     PSFEEY  ++R+RYVMGLQL++E QCEALV+EFKV 
Sbjct: 121 EIEFDGVGPTGPRDFGSVG--ESVPSFEEYYSDIRIRYVMGLQLMIEFQCEALVREFKVN 180

Query: 181 PVICGLAASIWLRFVTATRVFDEDWAFETVQDSESQCQ-DPERIRRVRFSDKDEPHNLYG 240
           P+ICGLA ++WLRFV  TRVFD+ W  E++ +SESQ Q +P +  + R     EPHN+YG
Sbjct: 181 PLICGLAGTVWLRFVAGTRVFDDGWVDESINESESQQQGEPPQDFKPRAKYGSEPHNMYG 240

Query: 241 QRVVVVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIEN 300
           QR V++W +SLRKKIPL  TL VSFLACH+ARE +L TDI+KWSLEGK+PY+AAF++IE 
Sbjct: 241 QRAVMIWFRSLRKKIPLSYTLGVSFLACHLAREPVLTTDIVKWSLEGKVPYFAAFVEIEK 300

Query: 301 RIGKTSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLA 360
            +G+ S+ CPIS   M RP+   + QKLESL+ASIA ++GL LPPVNF+SIA RYL +L+
Sbjct: 301 HMGQRSSGCPISTTLMFRPNESVTAQKLESLSASIADSVGLALPPVNFYSIASRYLRELS 360

Query: 361 LPVDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKS 420
           +P++KILPHA R+YEWSMPPDLWLSTNELRLP+RVCVMS+LI+A+RILYN+HGFGEWEKS
Sbjct: 361 IPLEKILPHARRMYEWSMPPDLWLSTNELRLPTRVCVMSMLIVAIRILYNIHGFGEWEKS 420

Query: 421 L-SVNCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNP---SVSPKNSHLTVT 480
           L   +  S+    + +   P  +                 +  NP   +   + + L   
Sbjct: 421 LCRRHTCSTSKGTEDSELKPDLDVKECAGKGSGSPQILDDSGTNPGRDTSHAQKTELDAA 480

Query: 481 EFLHKIEARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQ 540
           + L  +EARY  I ETY                                EYSKDLP+YLQ
Sbjct: 481 KLLCDLEARYRGINETY--------------------------------EYSKDLPSYLQ 540

Query: 541 YCKDVVFAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQT--EDVNQNAASNQKRLREGS 600
           +CKDVVFAG E  F +D+EE+++IE+LW++Y +E   +    E+ + + A  QKR R   
Sbjct: 541 FCKDVVFAGLEPSF-EDYEEKRLIEELWDFYWSERDSKTAVQEEAHGSEAVTQKRARVDV 600

Query: 601 NDRLSNDSKKVRGKEERINGE-SSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASID 660
             R     +  R +++   G+ S  N + S   Q S +S   ++S DD+++ +    S D
Sbjct: 601 ECRSFPFKENKRFRDKGCVGDPSPYNGSRSAGDQHSENSDQFDSSQDDQISEQKDQTSAD 660

Query: 661 G--------------------AIRRLKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGV 720
                                AIR LK D EE RF YIPPRV   RFDYLHY+RK DEG 
Sbjct: 661 SLKDETADTLKDETSEILKDEAIRLLKSDFEENRFYYIPPRVNPKRFDYLHYARKKDEGA 720

Query: 721 LTYAAHADYYILLRACARAAEVDIRIMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEF 761
           LTY AHADYYILLRACA+AA++DIR+MHIGVLS E+RL+W+E RI+  LHL P++V CEF
Sbjct: 721 LTYVAHADYYILLRACAKAAKIDIRLMHIGVLSFERRLAWIEQRINHCLHLKPATVFCEF 761

[Close]
BLAST of Lsi11G008540 vs. TrEMBL
Match: F6HPR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02430 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 7.9e-195
Identity = 390/758 (51.45%), Postives = 496/758 (65.44%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M +  +L+C+ CGS+G +DG DGFFYC +CGSQA+DIIDTGVA+ED   +  G + G IY
Sbjct: 1   MPERLDLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAK--GDARGAIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKED-PYGNEARKDDDVLMLNDG 120
           S SH R+R     K E LSQSQ       S+F ++L L +D    NE  +++ V    D 
Sbjct: 61  SASHRRQRHSIAPKPEPLSQSQ-------SQFLNNLTLDDDYRVENEETREETVA---DE 120

Query: 121 VGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGL 180
           VGP+GP DFG G   S   SFE+Y  ++R+RYVMG+Q+++ELQC+ALV++FK +P+ICG+
Sbjct: 121 VGPSGPSDFGLGLDGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGV 180

Query: 181 AASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVW 240
           A +IWLRFV  TRVFD++WA + +QDSE Q        + R     EPHN+YGQR V++W
Sbjct: 181 AGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRAKYSAEPHNIYGQRAVIIW 240

Query: 241 VKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSN 300
            +SL+KKIPL C+L +SFLACH+AREAILPTDI+KWSLEGKLPY+AAFI+IE +IG  S+
Sbjct: 241 HRSLKKKIPLSCSLVISFLACHIAREAILPTDILKWSLEGKLPYFAAFIEIEKQIGPPSS 300

Query: 301 ACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKIL 360
            CP+S   M RPS     QKLE+ AASIA  IGL+LPPVNF++IA RYL +L LPV+KIL
Sbjct: 301 PCPLSSSFMFRPSEAIPLQKLEAQAASIADFIGLHLPPVNFYAIAFRYLEQLFLPVEKIL 360

Query: 361 PHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCAS 420
           P+ACR+YEWSMPPDLWLS NELRLP+RVCVMSILI+ +RILYN+HGFG+WE SLS +  S
Sbjct: 361 PYACRVYEWSMPPDLWLSANELRLPTRVCVMSILIVTIRILYNVHGFGKWEMSLSSSSGS 420

Query: 421 SFPPNQKTHSSPANNFSNMQADSE-----NRSGFTSHNVDNPSVSPKNSHLTVTEFLHKI 480
           S   +Q    + ++N   M    +     + +G     V N S + K S    TE L  +
Sbjct: 421 SSSSSQIVKLNASDNIKMMDGAKQGSPLHDLNGSNEEPVTNSSHAQK-SEFDATELLCNL 480

Query: 481 EARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVV 540
           +ARY E+ +TY                                EYSKDLPTYLQYCKDVV
Sbjct: 481 DARYDELIDTY--------------------------------EYSKDLPTYLQYCKDVV 540

Query: 541 FAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTED--VNQNAASNQKRLR--EGSNDRL 600
           FAG E  F +DHEE+K+IEQLW +YQN+   E +ED  V   +A N+KR R  EG  + +
Sbjct: 541 FAGLELPF-EDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSI 600

Query: 601 SNDSKKVRGKEERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASIDGAIRR 660
             + KK+R       G   ++   S+NSQ    S     +  + L  E        AI R
Sbjct: 601 PKEKKKIRDDCSVPLGLDGDDT--SLNSQGGQKSVPTHQASVETLKEE--------AILR 660

Query: 661 LKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIR 720
           +K DMEE RFCYIPPRV   RFDYLHY RK DEG   YAAHADYYILLRACAR A+VD+R
Sbjct: 661 MKADMEENRFCYIPPRVNVKRFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 702

Query: 721 IMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCSD 749
            MH+GV+SLE+RL W+E RI   LH  P   S + C+D
Sbjct: 721 SMHVGVMSLERRLGWIEKRIDHCLHFKPPKFSSDPCND 702

[Close]
BLAST of Lsi11G008540 vs. TrEMBL
Match: A5ACR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027088 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.9e-193
Identity = 387/757 (51.12%), Postives = 494/757 (65.26%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M +  +L+C+ CGS+G +DG DGFFYC +CGSQA+DIIDTGVA+ED   +  G + G IY
Sbjct: 1   MPERLBLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAK--GDARGAIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKED-PYGNEARKDDDVLMLNDG 120
           S SH R+R     K E LSQSQ       S+F ++L L +D    NE  +++ V    D 
Sbjct: 61  SASHRRQRHSIAPKPEPLSQSQ-------SQFLNNLTLDDDYRVENEETREETVA---DE 120

Query: 121 VGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGL 180
           VGP+GP DFG G   S   SFE+Y  ++R+RYVMG+Q+++ELQC+ALV++FK +P+ICG+
Sbjct: 121 VGPSGPSDFGLGLDGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGV 180

Query: 181 AASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVW 240
           A +IWLRFV  TRVFD++WA + +QDSE Q        + R     EPHN+YGQR V++W
Sbjct: 181 AGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRTKYSAEPHNIYGQRAVIIW 240

Query: 241 VKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSN 300
            +SL+KKIPL C+L +SFLACH+AREAILPTDI+KWSLEGKLPY+AAFI+IE +IG  S+
Sbjct: 241 HRSLKKKIPLSCSLVISFLACHIAREAILPTDILKWSLEGKLPYFAAFIEIEKQIGPPSS 300

Query: 301 ACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKIL 360
            CP+S   M RPS     QKLE+ AASIA  IGL+LPPVNF++IA RYL +L LPV+KIL
Sbjct: 301 PCPLSSSFMFRPSEAIPLQKLEAQAASIADFIGLHLPPVNFYAIAFRYLEQLFLPVEKIL 360

Query: 361 PHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCAS 420
           P+ACR+YEWSMPPDLWLS NELRLP+RVCVMSILI+ +RILYN+HGFG+WE SLS +  S
Sbjct: 361 PYACRVYEWSMPPDLWLSANELRLPTRVCVMSILIVTIRILYNVHGFGKWEMSLSSSSGS 420

Query: 421 SFPPNQKTHSSPANNFSNMQADSE-----NRSGFTSHNVDNPSVSPKNSHLTVTEFLHKI 480
           S   +Q    + ++N   M    +     + +G     V N S + K S    TE L  +
Sbjct: 421 SSSSSQIVKLNASDNIKMMDGAKQGSPLHDLNGSNEEPVTNSSHAQK-SEFDATELLCNL 480

Query: 481 EARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVV 540
           +ARY E+ +TY                                EYSKDLPTYLQYCKDVV
Sbjct: 481 DARYDELIDTY--------------------------------EYSKDLPTYLQYCKDVV 540

Query: 541 FAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTED--VNQNAASNQKRLR--EGSNDRL 600
           FAG E  F +DHEE+K+IEQLW +YQN+   E +ED  V   +A N+KR R  EG  + +
Sbjct: 541 FAGLELPF-EDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSI 600

Query: 601 SNDSKKVRGKEERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASIDGAIRR 660
             + KK+R       G   ++   S+NSQ    S     +  + +  E        AI R
Sbjct: 601 PKEKKKIRDDCSVPLGLDGDDT--SLNSQGGQXSVPTHQASVETVKEE--------AILR 660

Query: 661 LKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIR 720
           +K DMEE RFCYIP RV   RFDYLHY RK DEG   YAAHADYYILLRACAR A+VD+R
Sbjct: 661 MKADMEENRFCYIPXRVNVKRFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 701

Query: 721 IMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCS 748
            MH+GV+SLE+RL W+E RI   LH  P   S + C+
Sbjct: 721 SMHVGVMSLERRLGWIEKRIDHCLHFKPPKFSSDXCN 701

[Close]
BLAST of Lsi11G008540 vs. TrEMBL
Match: B9S8W3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0836380 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 8.4e-189
Identity = 390/788 (49.49%), Postives = 505/788 (64.09%), Query Frame = 1 

Query: 8   SCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIYSQSHTRR 67
           +C  CG +GL +  DGF+YC +CG+QADDII TGVADED   +D G+ GG +YS   TR 
Sbjct: 13  ACRRCGHVGLEES-DGFYYCQECGAQADDIILTGVADEDFIEKD-GEGGGALYSARFTRY 72

Query: 68  RIPAVLKVETLSQSQPLFGPSQSE---FWDSLNLKEDPYGN-----EARKDDDVLMLNDG 127
             P    ++T   SQ  F  +Q E    + +       Y N     E R DDD  +  DG
Sbjct: 73  SQP-TRTIQTNPSSQAWFRYTQEEEDINFTTTTTLNGTYSNIKIKKEERFDDDEYL--DG 132

Query: 128 VGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGL 187
           +GP  PEDFG   +     S+E+Y +EVR+RYVMG+Q +++LQCE+LV++F V+P+ICG+
Sbjct: 133 LGPVEPEDFGGKSL-----SYEDYYNEVRIRYVMGMQWMIQLQCESLVEKFNVSPLICGV 192

Query: 188 AASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVW 247
           A ++WLRF+ AT VF ++WA + + +SESQ Q      + R S ++EPHN YGQR V+VW
Sbjct: 193 AGNVWLRFLVATGVFKDNWADDVILESESQVQGEPEDWKPRSSHRNEPHNAYGQRAVMVW 252

Query: 248 VKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSN 307
            K LRK IPL  +LA+SFLACHVAREAILPTDI++WS+EGKLPY+AA ++IE R   +S 
Sbjct: 253 FKYLRKTIPLSSSLAISFLACHVAREAILPTDIVRWSIEGKLPYFAAHVEIEKRFEHSSP 312

Query: 308 ACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKIL 367
           ACPIS   M RPS+    QKLES+AA+ A +IGL+LPPVNF+ IA RYL  LALPV+KIL
Sbjct: 313 ACPISSSLMFRPSQAVPAQKLESMAAAFAESIGLHLPPVNFYEIASRYLKNLALPVEKIL 372

Query: 368 PHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSL-SVNCA 427
           PHACRIYEWSMPPDLWLSTNELRLP+RV VMSILI+A+RILYNL+GFG WE+SL S+NC+
Sbjct: 373 PHACRIYEWSMPPDLWLSTNELRLPTRVTVMSILIVAIRILYNLNGFGAWERSLSSLNCS 432

Query: 428 SSFPPNQKTHSSPANNF-----SNMQADSENRSGFTSHNVDNPSVSPKNSHLTV-----T 487
            S       +S PA+       S MQ D+E  S F S +          SH+ +      
Sbjct: 433 PS-------NSHPASRLDSMCRSVMQGDAETGSPFYSLDGSAEKFLRNPSHMQMPELDSA 492

Query: 488 EFLHKIEARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQ 547
           E LH +E +Y+ IA+ Y                                E++KDLP+YLQ
Sbjct: 493 ELLHHLEVKYNFIADAY--------------------------------EFTKDLPSYLQ 552

Query: 548 YCKDVVFAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAA---SNQKRLREG 607
           YCKDVVFAG+    +DD EE++++E+LW++YQNE   E  ++    ++   SNQKR R  
Sbjct: 553 YCKDVVFAGAGPSHMDDLEEEELMEKLWDFYQNEKDSELAKEPRTQSSSRLSNQKRSRND 612

Query: 608 SNDRLSNDSKKVRGKEE-------RINGESSNNRTGSINSQQSHSSKSLENSDDDELASE 667
                 N S+K + KEE        I+  +++N +         S+ SLE+ + +    +
Sbjct: 613 DGSVFVNLSEKEKIKEEWHDSPSADISSHNADNSSHQSFDNGHFSNNSLEDQNVEHKEKD 672

Query: 668 DKAASIDGAIRRLKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILL 727
            +      AIRRLKLDMEE RFCYIPPRV   RFDYLHY RK DEG  TY AHADYYILL
Sbjct: 673 SEKTLEGRAIRRLKLDMEENRFCYIPPRVNLKRFDYLHYVRKKDEGAFTYVAHADYYILL 732

Query: 728 RACARAAEVDIRIMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCSD------HVDS 761
           RACAR A+VDIRIMHIGVLS E+RL+WLE RI   LHL+P +++CEFC D      + D 
Sbjct: 733 RACARVAQVDIRIMHIGVLSFERRLAWLEKRIDYCLHLSPPTITCEFCRDMPDHNSNDDV 751

[Close]
BLAST of Lsi11G008540 vs. TAIR10
Match: AT2G02955.1 (AT2G02955.1 maternal effect embryo arrest 12)

HSP 1 Score: 329.3 bits (843), Expect = 6.1e-90
Identity = 193/484 (39.88%), Postives = 275/484 (56.82%), Query Frame = 1 

Query: 9   CYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DL + + G + G +Y+  H R  
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDL-IGEGGGTQGALYNPKHRR-- 62

Query: 69  IPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGN-----EARKDDDVLMLNDGVGPT 128
                + + ++ SQP F    S +    +  E   GN     E ++  D  +  +   PT
Sbjct: 63  ----TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE---PT 122

Query: 129 GPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLAASI 188
            P DF +  +     S+E Y DE R RYV    +++  QC+ALV +F VTP+I GL   I
Sbjct: 123 EPVDFAAETL-----SYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPI 182

Query: 189 WLRFVTATRVFDEDWAFETVQDSESQCQDPE-----RIRRVRFSDKDEPHNLYGQRVVVV 248
            LR+V  + V+ +DWA   ++DSE Q +D E     R++R     K EP N+ G+R V +
Sbjct: 183 SLRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKR----HKAEPRNIDGKRAVTI 242

Query: 249 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTS 308
           W   L+K +PL  +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI  ++G+ S
Sbjct: 243 WFGILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERS 302

Query: 309 NACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 368
            ACP+    M RP ++ S Q LE+ A+ IA TIGL LPPVNF+ IA  Y+ +L++P DKI
Sbjct: 303 AACPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKI 362

Query: 369 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCA 428
           L  A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL    A
Sbjct: 363 LDLARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLGFVNA 422

Query: 429 SSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARY 483
           S                     DSE  SG           + K +     E L  +EA+Y
Sbjct: 423 S-------------------DGDSETNSG----------TAEKATEFDTQELLKNLEAKY 438

[Close]
BLAST of Lsi11G008540 vs. NCBI nr
Match: gi|659082497|ref|XP_008441871.1| (PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucumis melo])

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 642/769 (83.49%), Postives = 680/769 (88.43%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           MADP NLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVA+EDLA+RD GKSGGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLNDGV 120
           SQSHTRRR P VLKVE LSQSQPLFG SQSEFWDSL+LKEDP GN  + DD ++MLNDGV
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQPLFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLNDGV 120

Query: 121 GPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLA 180
           GPTGPEDFGSG V S KPSFEEYADEVRMRYVMGLQLIMELQCE LVKEFK TP+ICGLA
Sbjct: 121 GPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICGLA 180

Query: 181 ASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVWV 240
           ASIWLRFVTATRVFDEDWAF+TVQ+SESQC D ERIRRV  S KDEPHN YGQRVVV+WV
Sbjct: 181 ASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVLWV 240

Query: 241 KSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSNA 300
           KSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAF+DIE+RIGKTS A
Sbjct: 241 KSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTSRA 300

Query: 301 CPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360
           CPIS + MHRPSRISS QKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP
Sbjct: 301 CPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360

Query: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCASS 420
           HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LYNLHGFGEWEKSLSVNCAS 
Sbjct: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCASY 420

Query: 421 FPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARYHE 480
           FPPNQKTHSSPANNFSNMQADSENR GFTSH++DNPSVSP+N HLT TEFL KIEARYHE
Sbjct: 421 FPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSPENPHLTTTEFLRKIEARYHE 480

Query: 481 IAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVVFAGSES 540
           IAETY                                EYSKDLP+YLQYCKDVVFAGSES
Sbjct: 481 IAETY--------------------------------EYSKDLPSYLQYCKDVVFAGSES 540

Query: 541 LFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAASNQKRLREGSNDRLSNDSKKVRGK 600
           LF+DDHEEQKMIE+LWNYYQNE   +QTEDV+QN ASN KRLREGSNDRLS++SKKV+G+
Sbjct: 541 LFIDDHEEQKMIEKLWNYYQNEKDHDQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGE 600

Query: 601 EERINGESSNNRTGSINSQQSHSSKSLENS--DDDELASEDKAA----SIDGAIRRLKLD 660
           E+ I+GESSNNRTGSI+S+QSHSSKSLENS  DDDE +SEDKAA    SI+ AIR+LKLD
Sbjct: 601 EDCISGESSNNRTGSIDSRQSHSSKSLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLD 660

Query: 661 MEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIRIMHI 720
           MEEKRFCYIPPR    RF YLHYSRK+DEG LTYAAHADYYILLRACARAA+VDIRIMHI
Sbjct: 661 MEEKRFCYIPPRANPKRFGYLHYSRKIDEGALTYAAHADYYILLRACARAAQVDIRIMHI 720

Query: 721 GVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCSD---HVDSTGLSYLDI 761
           GVLSLEKRLSWLEDRIHK+L LTPSSV+CEFCSD   H+DS GLS LDI
Sbjct: 721 GVLSLEKRLSWLEDRIHKTLRLTPSSVTCEFCSDVPNHIDSVGLSDLDI 737

[Close]
BLAST of Lsi11G008540 vs. NCBI nr
Match: gi|449470354|ref|XP_004152882.1| (PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucumis sativus])

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 639/767 (83.31%), Postives = 676/767 (88.14%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           MADP NLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVA+EDL +RD GKSG PIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLNDGV 120
           SQSHTRRR P VLKVE LSQSQ LFG SQSEFWDSLNL EDP GN   KD D++MLNDGV
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLNDGV 120

Query: 121 GPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGLA 180
           GPTGPEDFGSG V S KPSFEEYADEVRMRYVMGLQLIMELQCE LVKEFK TP+ICGLA
Sbjct: 121 GPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICGLA 180

Query: 181 ASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVWV 240
           ASIWLRFVTATRVFDEDWAF+TVQ+SESQC DPERIRRV  S KDEPHN YGQRVVV+WV
Sbjct: 181 ASIWLRFVTATRVFDEDWAFQTVQESESQCLDPERIRRVCSSHKDEPHNFYGQRVVVLWV 240

Query: 241 KSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSNA 300
           KSLRKKIPLF TLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAF+DIE+RIGKTS A
Sbjct: 241 KSLRKKIPLFSTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTSRA 300

Query: 301 CPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360
           CPIS + MHRPSRISS QKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP
Sbjct: 301 CPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILP 360

Query: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCASS 420
           HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSV+CAS 
Sbjct: 361 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVDCASC 420

Query: 421 FPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSPKNSHLTVTEFLHKIEARYHE 480
           FPP+QKTHSSPANNFSNMQADSENR GFTSH+VDNPSVSP+N HLT TEFL KIEARYHE
Sbjct: 421 FPPHQKTHSSPANNFSNMQADSENRPGFTSHDVDNPSVSPENPHLTTTEFLRKIEARYHE 480

Query: 481 IAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVVFAGSES 540
           IAETY                                EYSKDLPTYLQYCKDV FAGSES
Sbjct: 481 IAETY--------------------------------EYSKDLPTYLQYCKDVAFAGSES 540

Query: 541 LFVDDHEEQKMIEQLWNYYQNETYPEQTEDVNQNAASNQKRLREGSNDRLSNDSKKVRGK 600
           LF+DDH+EQKMIE+LWNYYQNE   +QTEDV+QNAASNQKRLREGSNDRLSN+SKKV+G+
Sbjct: 541 LFIDDHDEQKMIEKLWNYYQNEKDYDQTEDVDQNAASNQKRLREGSNDRLSNESKKVKGE 600

Query: 601 EERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAA----SIDGAIRRLKLDME 660
           E+RI+ ES NNRTGSI+S+QSHSSKSL+NSDDDE +S DKAA    SI+ AIR+LKLDME
Sbjct: 601 EDRISRESLNNRTGSIDSRQSHSSKSLDNSDDDEQSSVDKAASSLTSINEAIRQLKLDME 660

Query: 661 EKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIRIMHIGV 720
           EKRFCYIPPR+   RFDYLHYSRK+DEG LTYAAHADYYILLRACARAA+VDIRIMHIGV
Sbjct: 661 EKRFCYIPPRINPKRFDYLHYSRKIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGV 720

Query: 721 LSLEKRLSWLEDRIHKSLHLTPSSVSCEFCS---DHVDSTGLSYLDI 761
           LSLEKRLSWLEDRIHKSL LTP+S++CEFCS   DHV S GLS LDI
Sbjct: 721 LSLEKRLSWLEDRIHKSLRLTPTSITCEFCSDVPDHVGSVGLSDLDI 735

[Close]
BLAST of Lsi11G008540 vs. NCBI nr
Match: gi|1009154268|ref|XP_015895077.1| (PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Ziziphus jujuba])

HSP 1 Score: 750.4 bits (1936), Expect = 3.2e-213
Identity = 429/780 (55.00%), Postives = 527/780 (67.56%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M+DP    C  CG++GL DG DGFFYCLQCGSQA+DI+DTGVADED  V   G++GG +Y
Sbjct: 1   MSDPQAWRCNTCGNLGLADGSDGFFYCLQCGSQAEDIVDTGVADEDF-VDAGGETGGALY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPS-QSEFWDSLNLKEDPYGNEARK----DDDVLM 120
             SH R+R P+V+K E +SQS  L   + QS+FW SLNL ++    +  K    D DV  
Sbjct: 61  IASHRRQRNPSVIKAEPISQSDFLLSSTVQSQFWASLNLNDETPKRDRVKTVEYDYDVGP 120

Query: 121 LNDGVGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPV 180
            +DGVGPT PEDF  G V    PSFE+Y +E R+RYVMGLQL++E QCEALV+EFKVTP+
Sbjct: 121 FSDGVGPTEPEDF--GWVGESVPSFEDYYNETRIRYVMGLQLMIESQCEALVREFKVTPL 180

Query: 181 ICGLAASIWLRFVTATRVFDEDWAFETVQDSESQCQ-DPERIRRVRFSDKDEPHNLYGQR 240
           ICG A +IWLRFV  TRVFD+ W  ET+ +SE+Q   +     + R   K EP N+YGQR
Sbjct: 181 ICGFAGTIWLRFVAGTRVFDDAWVEETIHESETQAHGESPTDFKPRSKYKAEPQNIYGQR 240

Query: 241 VVVVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRI 300
            V++W +SLRK+IPL C+LAVSFLACH+AREAILPTD++KWSLEGKLPY+AAF++IEN I
Sbjct: 241 AVMIWFRSLRKRIPLTCSLAVSFLACHLAREAILPTDLVKWSLEGKLPYFAAFVEIENVI 300

Query: 301 GKTSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALP 360
           GK S ACPIS   M RP    S QKLESLAAS+A +I L+LPPVNF++IA  YL KL+LP
Sbjct: 301 GKPSRACPISSSTMFRPRESVSAQKLESLAASVAESICLDLPPVNFYAIASCYLQKLSLP 360

Query: 361 VDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLS 420
           V+KILPHACRIYEWS PPDLWLST+ELRLP+RVCVMSILI+A+RILYN+HGFG+WE+ LS
Sbjct: 361 VEKILPHACRIYEWSTPPDLWLSTSELRLPTRVCVMSILIVAIRILYNIHGFGDWERRLS 420

Query: 421 VNCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNPSVSP-------KNSHLTV 480
            +  +         S P+ N   M+ D  N SG     VD+   +P       + S L  
Sbjct: 421 NDGEAPSTSYWTGESDPSCN-PKMRDDLTNGSGSPPDIVDDSGTNPVENTSRAQKSELDA 480

Query: 481 TEFLHKIEARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYL 540
            E LH +EARY+EI ETY                                EYSKDLPTYL
Sbjct: 481 AELLHNLEARYNEIVETY--------------------------------EYSKDLPTYL 540

Query: 541 QYCKDVVFAGSESLFVDDHEEQKMIEQLWNYYQNETYPE---QTEDVNQNAASNQKRLR- 600
           Q+CKDVVF+G E  F +D EE+KMIEQLWNYYQN    E   + E +  + A +QKR R 
Sbjct: 541 QFCKDVVFSGLEPSF-EDREEEKMIEQLWNYYQNNKDSETASEKEMLCGSGAVSQKRPRT 600

Query: 601 -EGSNDRLSNDSKKVRGKEERINGESSNN----RTGSINSQQS--HSSKSLE---NSDDD 660
            EG   RL  + KK+R ++  ++G SSN+     TG+    Q+  HS  SL+   NSD +
Sbjct: 601 DEGCTSRLPKEKKKIRDRD--VSGSSSNDDDSYHTGNQQWSQNGDHSFDSLQGGRNSDSN 660

Query: 661 E------LASEDKAASIDGAIRRLKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLT 720
           +      L  E    + + A+RR+KLDMEE  FCYIPPRV   RF YL Y RK DEG  T
Sbjct: 661 DQISAETLVDETTETTKNEAVRRIKLDMEENNFCYIPPRVNIKRFGYLFYVRKKDEGAFT 720

Query: 721 YAAHADYYILLRACARAAEVDIRIMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCS 748
           YAAHADYYILLRACA+ A+V+IR MHIGVL+LE+RL+WLE RI+  LHLTP  VSCEFCS
Sbjct: 721 YAAHADYYILLRACAKTAQVEIRCMHIGVLNLERRLAWLEHRINHCLHLTPPIVSCEFCS 741

[Close]
BLAST of Lsi11G008540 vs. NCBI nr
Match: gi|703061724|ref|XP_010086553.1| (hypothetical protein L484_001445 [Morus notabilis])

HSP 1 Score: 691.0 bits (1782), Expect = 2.3e-195
Identity = 393/799 (49.19%), Postives = 513/799 (64.21%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M+DP   +C+ CG+ G  DGFDGF+YCL+CGSQA+DII+TGVADED A +  G +G P+Y
Sbjct: 1   MSDPHAWTCHTCGNAGFADGFDGFYYCLRCGSQAEDIIETGVADEDFADK-GGTAGAPLY 60

Query: 61  SQSHTRRRIPAV--LKVETLSQSQPLFGPSQSEFWDSLNLKEDPYGNEARKDDDVLMLN- 120
           S +H R R  A   +K E +SQ Q      QS+FW +L L +D  G    + +   +   
Sbjct: 61  SATHRRNRPVAASAIKAEPISQVQS--ATLQSQFWAALTLDDDGEGEGGDRFNRASIKTE 120

Query: 121 ----DGVGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVT 180
               DGVGPTGP DFGS G     PSFEEY  ++R+RYVMGLQL++E QCEALV+EFKV 
Sbjct: 121 EIEFDGVGPTGPRDFGSVG--ESVPSFEEYYSDIRIRYVMGLQLMIEFQCEALVREFKVN 180

Query: 181 PVICGLAASIWLRFVTATRVFDEDWAFETVQDSESQCQ-DPERIRRVRFSDKDEPHNLYG 240
           P+ICGLA ++WLRFV  TRVFD+ W  E++ +SESQ Q +P +  + R     EPHN+YG
Sbjct: 181 PLICGLAGTVWLRFVAGTRVFDDGWVDESINESESQQQGEPPQDFKPRAKYGSEPHNMYG 240

Query: 241 QRVVVVWVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIEN 300
           QR V++W +SLRKKIPL  TL VSFLACH+ARE +L TDI+KWSLEGK+PY+AAF++IE 
Sbjct: 241 QRAVMIWFRSLRKKIPLSYTLGVSFLACHLAREPVLTTDIVKWSLEGKVPYFAAFVEIEK 300

Query: 301 RIGKTSNACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLA 360
            +G+ S+ CPIS   M RP+   + QKLESL+ASIA ++GL LPPVNF+SIA RYL +L+
Sbjct: 301 HMGQRSSGCPISTTLMFRPNESVTAQKLESLSASIADSVGLALPPVNFYSIASRYLRELS 360

Query: 361 LPVDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKS 420
           +P++KILPHA R+YEWSMPPDLWLSTNELRLP+RVCVMS+LI+A+RILYN+HGFGEWEKS
Sbjct: 361 IPLEKILPHARRMYEWSMPPDLWLSTNELRLPTRVCVMSMLIVAIRILYNIHGFGEWEKS 420

Query: 421 L-SVNCASSFPPNQKTHSSPANNFSNMQADSENRSGFTSHNVDNP---SVSPKNSHLTVT 480
           L   +  S+    + +   P  +                 +  NP   +   + + L   
Sbjct: 421 LCRRHTCSTSKGTEDSELKPDLDVKECAGKGSGSPQILDDSGTNPGRDTSHAQKTELDAA 480

Query: 481 EFLHKIEARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQ 540
           + L  +EARY  I ETY                                EYSKDLP+YLQ
Sbjct: 481 KLLCDLEARYRGINETY--------------------------------EYSKDLPSYLQ 540

Query: 541 YCKDVVFAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQT--EDVNQNAASNQKRLREGS 600
           +CKDVVFAG E  F +D+EE+++IE+LW++Y +E   +    E+ + + A  QKR R   
Sbjct: 541 FCKDVVFAGLEPSF-EDYEEKRLIEELWDFYWSERDSKTAVQEEAHGSEAVTQKRARVDV 600

Query: 601 NDRLSNDSKKVRGKEERINGE-SSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASID 660
             R     +  R +++   G+ S  N + S   Q S +S   ++S DD+++ +    S D
Sbjct: 601 ECRSFPFKENKRFRDKGCVGDPSPYNGSRSAGDQHSENSDQFDSSQDDQISEQKDQTSAD 660

Query: 661 G--------------------AIRRLKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGV 720
                                AIR LK D EE RF YIPPRV   RFDYLHY+RK DEG 
Sbjct: 661 SLKDETADTLKDETSEILKDEAIRLLKSDFEENRFYYIPPRVNPKRFDYLHYARKKDEGA 720

Query: 721 LTYAAHADYYILLRACARAAEVDIRIMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEF 761
           LTY AHADYYILLRACA+AA++DIR+MHIGVLS E+RL+W+E RI+  LHL P++V CEF
Sbjct: 721 LTYVAHADYYILLRACAKAAKIDIRLMHIGVLSFERRLAWIEQRINHCLHLKPATVFCEF 761

[Close]
BLAST of Lsi11G008540 vs. NCBI nr
Match: gi|225425686|ref|XP_002269865.1| (PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Vitis vinifera])

HSP 1 Score: 688.7 bits (1776), Expect = 1.1e-194
Identity = 390/758 (51.45%), Postives = 496/758 (65.44%), Query Frame = 1 

Query: 1   MADPCNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLAVRDAGKSGGPIY 60
           M +  +L+C+ CGS+G +DG DGFFYC +CGSQA+DIIDTGVA+ED   +  G + G IY
Sbjct: 1   MPERLDLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAK--GDARGAIY 60

Query: 61  SQSHTRRRIPAVLKVETLSQSQPLFGPSQSEFWDSLNLKED-PYGNEARKDDDVLMLNDG 120
           S SH R+R     K E LSQSQ       S+F ++L L +D    NE  +++ V    D 
Sbjct: 61  SASHRRQRHSIAPKPEPLSQSQ-------SQFLNNLTLDDDYRVENEETREETVA---DE 120

Query: 121 VGPTGPEDFGSGGVPSVKPSFEEYADEVRMRYVMGLQLIMELQCEALVKEFKVTPVICGL 180
           VGP+GP DFG G   S   SFE+Y  ++R+RYVMG+Q+++ELQC+ALV++FK +P+ICG+
Sbjct: 121 VGPSGPSDFGLGLDGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGV 180

Query: 181 AASIWLRFVTATRVFDEDWAFETVQDSESQCQDPERIRRVRFSDKDEPHNLYGQRVVVVW 240
           A +IWLRFV  TRVFD++WA + +QDSE Q        + R     EPHN+YGQR V++W
Sbjct: 181 AGTIWLRFVATTRVFDDEWADKVIQDSEMQKPGESEDLKPRAKYSAEPHNIYGQRAVIIW 240

Query: 241 VKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFIDIENRIGKTSN 300
            +SL+KKIPL C+L +SFLACH+AREAILPTDI+KWSLEGKLPY+AAFI+IE +IG  S+
Sbjct: 241 HRSLKKKIPLSCSLVISFLACHIAREAILPTDILKWSLEGKLPYFAAFIEIEKQIGPPSS 300

Query: 301 ACPISPRHMHRPSRISSQQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKIL 360
            CP+S   M RPS     QKLE+ AASIA  IGL+LPPVNF++IA RYL +L LPV+KIL
Sbjct: 301 PCPLSSSFMFRPSEAIPLQKLEAQAASIADFIGLHLPPVNFYAIAFRYLEQLFLPVEKIL 360

Query: 361 PHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSVNCAS 420
           P+ACR+YEWSMPPDLWLS NELRLP+RVCVMSILI+ +RILYN+HGFG+WE SLS +  S
Sbjct: 361 PYACRVYEWSMPPDLWLSANELRLPTRVCVMSILIVTIRILYNVHGFGKWEMSLSSSSGS 420

Query: 421 SFPPNQKTHSSPANNFSNMQADSE-----NRSGFTSHNVDNPSVSPKNSHLTVTEFLHKI 480
           S   +Q    + ++N   M    +     + +G     V N S + K S    TE L  +
Sbjct: 421 SSSSSQIVKLNASDNIKMMDGAKQGSPLHDLNGSNEEPVTNSSHAQK-SEFDATELLCNL 480

Query: 481 EARYHEIAETYGMIMISTNLSYTFALLDKSTLPIPAHFYFLLTEYSKDLPTYLQYCKDVV 540
           +ARY E+ +TY                                EYSKDLPTYLQYCKDVV
Sbjct: 481 DARYDELIDTY--------------------------------EYSKDLPTYLQYCKDVV 540

Query: 541 FAGSESLFVDDHEEQKMIEQLWNYYQNETYPEQTED--VNQNAASNQKRLR--EGSNDRL 600
           FAG E  F +DHEE+K+IEQLW +YQN+   E +ED  V   +A N+KR R  EG  + +
Sbjct: 541 FAGLELPF-EDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINSI 600

Query: 601 SNDSKKVRGKEERINGESSNNRTGSINSQQSHSSKSLENSDDDELASEDKAASIDGAIRR 660
             + KK+R       G   ++   S+NSQ    S     +  + L  E        AI R
Sbjct: 601 PKEKKKIRDDCSVPLGLDGDDT--SLNSQGGQKSVPTHQASVETLKEE--------AILR 660

Query: 661 LKLDMEEKRFCYIPPRVKSTRFDYLHYSRKLDEGVLTYAAHADYYILLRACARAAEVDIR 720
           +K DMEE RFCYIPPRV   RFDYLHY RK DEG   YAAHADYYILLRACAR A+VD+R
Sbjct: 661 MKADMEENRFCYIPPRVNVKRFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 702

Query: 721 IMHIGVLSLEKRLSWLEDRIHKSLHLTPSSVSCEFCSD 749
            MH+GV+SLE+RL W+E RI   LH  P   S + C+D
Sbjct: 721 SMHVGVMSLERRLGWIEKRIDHCLHFKPPKFSSDPCND 702

The following BLAST results are available for this feature:
BLAST of Lsi11G008540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TAF1B_ORYSI6.8e-9135.81TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... [more]
MEE12_ARATH1.1e-8839.88TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabido... [more]
TAF1B_ORYSJ2.2e-7337.77TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s... [more]
BLAST of Lsi11G008540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHI6_CUCSA0.0e+0083.31Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074100 PE=4 SV=1[more]
W9QI88_9ROSA1.6e-19549.19Uncharacterized protein OS=Morus notabilis GN=L484_001445 PE=4 SV=1[more]
F6HPR5_VITVI7.9e-19551.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02430 PE=4 SV=... [more]
A5ACR3_VITVI1.9e-19351.12Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027088 PE=4 SV=1[more]
B9S8W3_RICCO8.4e-18949.49Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0836380 PE=4 SV=1[more]
BLAST of Lsi11G008540 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02955.16.1e-9039.88 maternal effect embryo arrest 12[more]
BLAST of Lsi11G008540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082497|ref|XP_008441871.1|0.0e+0083.49PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B... [more]
gi|449470354|ref|XP_004152882.1|0.0e+0083.31PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B... [more]
gi|1009154268|ref|XP_015895077.1|3.2e-21355.00PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B... [more]
gi|703061724|ref|XP_010086553.1|2.3e-19549.19hypothetical protein L484_001445 [Morus notabilis][more]
gi|225425686|ref|XP_002269865.1|1.1e-19451.45PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0001188 RNA polymerase I transcriptional preinitiation complex assembly
cellular_component GO:0000120 RNA polymerase I transcription factor complex
cellular_component GO:0070860 RNA polymerase I core factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0001164 RNA polymerase I CORE element sequence-specific DNA binding
molecular_function GO:0001187 transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G008540.1Lsi11G008540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31576FAMILY NOT NAMEDcoord: 125..411
score: 1.4E-107coord: 1..55
score: 1.4E-107coord: 430..752
score: 1.4E