Lsi11G007550 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G007550
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSyntaxin/T-SNARE family protein
Locationchr11 : 8488111 .. 8490016 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCCTTGTAAAAAGAAAGGTGGGGAATTGTGGAAGAAAGAATCAACAACAGAGAGAGCTCCATCTCTGTCTCATGGTTGTGTGAGCTTTGCCTCTTTGTATTCATCTCTCTTCTTGCTTCTCTCAAGCAACCAACACACCAATTACTCAACAATCAAACCCTTTTACCTTCCCATTTCTTCCATCAAACCAACATTTCATTTTCCCATTTTGATGATCTTTGATTTCTAAACCTCGCTCTTCCTTCTTTCATATTTTCATAATCTCTGCTCTGTTTTCCCCTCTTTATCCACAATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACGTACGTTTCTTTTACTATTCCTTTGATTTGAGTTTTTTTTTTTTCTCGCTCTCCATGTTTGATTGAGTTTTATTTCGATTTGTTGTTGAATTTATTGGGTTCTTTTCTGGGTTAGTTTTATTTGAGTCTGTGATGATCTGTTTGTGGGTGTTTTGTTCTTCTCTCTTTGTATTTTTCCTTTTCAAGATGCTTAAGCTTATGTTCTCTGTTTTCGTTGGATGAGTTTAGTGATGGTTCAAGAACCTAAAATTTATCCCCCAAAGAGGTTTTCTTTTCTGTGTGCTGCATTTGGAAAGCTGCTCTGAATTCTATAAGTTTATATGCTTAATGGGGTTTGGAGGGATTCTACTGCTTTCTTCATTTGTTGACCATTTCTTAGGCCATTAAACTTCAGTTAGTCAAAGATGTTTCTATTGCCTTTTTCTTCTATATTGATTCTTCTATTGATTTTTTATTTCAGAATGGAGTTTGCATATAGGACATGGATAAGAGAGAAAAGAGAAGGGCTAAGTCCAGGTGATTTGGACGAACTCCGTCGAGAGGTGCAAACGGCTCTTGGCACAGCCAAATGGCAGGTAGGATACTGAATTGAACTAATAAATGCATCTGTTCTATTTCTTATTGTCATGAAAATAGAAGATATTTCTTCCAAAATCTAATGGAATGCTTAATTAGGATTCTTAGATGATAATCCAGATGTATAACTAGAGTGACAACTTACAATGGGTCATGTTTGATAGTCAAGCTATATTTATGCATTGATTTATTTGGACCTATAATTCTACTTTTTACAAACCACAAACATGAATGTTGTTTTTTCTGTTGACAATTAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTTCCAGAAGTGAAGAACATTTGTTGGAAAGACATAGACTATTTATTGCAGCCATTGGAAATCAAATTTCCCATGTTGAAGCTGCTTTAAGAAAATCTTATGACAAAGAGGGCAAGCAGCCACTTCGATGGGTAAATCTAAATGAGGAAGAATGCAATGATTTGGCTACATTTCTCTCTGGCATATCGCAAGTACCACGAAGTGCAAAAACCGAATCTTCTGTGTGTAGGTCTTCAGCAAAAAGTTCTATATCTGAGAATCATGAACGATTAGTGGCAGATATGAATCTTACTTCTACCTGTAGCTTGAGTAATTCCTCTAAAATGAAGGGCAGTGAATATGTTAATGCAGTAGATATAGATTCACTGAAAGTCAAAGATCTGGAAGTGAAAGAAAGTTTTAGAAGAGTAGATGATGCACTATGCGAAATGGATAGATCAGCAAAGGCAAGGAGAGCAAATCCGCCAACTGCTCCTGACCTGCAAATTGTAATTCTGGATGAAAATCAAGAGAGAAAACAGTCTATTACAAGTTTAGAAGTTTCAAGAAAAGGAAAATCGGGATCAATCTTCTGGAAACACGGATGTGGAAATTTTTCTCAGGTGAGCATTGCAGGGAACTGCTTCAATCTGGTAGACTTGGTTTTGTTTGTCTTTTAG

mRNA sequence

TAGCCTTGTAAAAAGAAAGGTGGGGAATTGTGGAAGAAAGAATCAACAACAGAGAGAGCTCCATCTCTGTCTCATGGTTGTGTGAGCTTTGCCTCTTTGTATTCATCTCTCTTCTTGCTTCTCTCAAGCAACCAACACACCAATTACTCAACAATCAAACCCTTTTACCTTCCCATTTCTTCCATCAAACCAACATTTCATTTTCCCATTTTGATGATCTTTGATTTCTAAACCTCGCTCTTCCTTCTTTCATATTTTCATAATCTCTGCTCTGTTTTCCCCTCTTTATCCACAATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGATAAGAGAGAAAAGAGAAGGGCTAAGTCCAGGTGATTTGGACGAACTCCGTCGAGAGGTGCAAACGGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTTCCAGAAGTGAAGAACATTTGTTGGAAAGACATAGACTATTTATTGCAGCCATTGGAAATCAAATTTCCCATGTTGAAGCTGCTTTAAGAAAATCTTATGACAAAGAGGGCAAGCAGCCACTTCGATGGGTAAATCTAAATGAGGAAGAATGCAATGATTTGGCTACATTTCTCTCTGGCATATCGCAAGTACCACGAAGTGCAAAAACCGAATCTTCTGTGTGTAGGTCTTCAGCAAAAAGTTCTATATCTGAGAATCATGAACGATTAGTGGCAGATATGAATCTTACTTCTACCTGTAGCTTGAGTAATTCCTCTAAAATGAAGGGCAGTGAATATGTTAATGCAGTAGATATAGATTCACTGAAAGTCAAAGATCTGGAAGTGAAAGAAAGTTTTAGAAGAGTAGATGATGCACTATGCGAAATGGATAGATCAGCAAAGGCAAGGAGAGCAAATCCGCCAACTGCTCCTGACCTGCAAATTGTAATTCTGGATGAAAATCAAGAGAGAAAACAGTCTATTACAAGTTTAGAAGTTTCAAGAAAAGGAAAATCGGGATCAATCTTCTGGAAACACGGATGTGGAAATTTTTCTCAGGTGAGCATTGCAGGGAACTGCTTCAATCTGGTAGACTTGGTTTTGTTTGTCTTTTAG

Coding sequence (CDS)

ATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGATAAGAGAGAAAAGAGAAGGGCTAAGTCCAGGTGATTTGGACGAACTCCGTCGAGAGGTGCAAACGGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTTCCAGAAGTGAAGAACATTTGTTGGAAAGACATAGACTATTTATTGCAGCCATTGGAAATCAAATTTCCCATGTTGAAGCTGCTTTAAGAAAATCTTATGACAAAGAGGGCAAGCAGCCACTTCGATGGGTAAATCTAAATGAGGAAGAATGCAATGATTTGGCTACATTTCTCTCTGGCATATCGCAAGTACCACGAAGTGCAAAAACCGAATCTTCTGTGTGTAGGTCTTCAGCAAAAAGTTCTATATCTGAGAATCATGAACGATTAGTGGCAGATATGAATCTTACTTCTACCTGTAGCTTGAGTAATTCCTCTAAAATGAAGGGCAGTGAATATGTTAATGCAGTAGATATAGATTCACTGAAAGTCAAAGATCTGGAAGTGAAAGAAAGTTTTAGAAGAGTAGATGATGCACTATGCGAAATGGATAGATCAGCAAAGGCAAGGAGAGCAAATCCGCCAACTGCTCCTGACCTGCAAATTGTAATTCTGGATGAAAATCAAGAGAGAAAACAGTCTATTACAAGTTTAGAAGTTTCAAGAAAAGGAAAATCGGGATCAATCTTCTGGAAACACGGATGTGGAAATTTTTCTCAGGTGAGCATTGCAGGGAACTGCTTCAATCTGGTAGACTTGGTTTTGTTTGTCTTTTAG

Protein sequence

MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTALGTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPLRWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCSLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQIVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQVSIAGNCFNLVDLVLFVF
Homology
[Close]
BLAST of Lsi11G007550 vs. TrEMBL
Match: A0A0A0LMD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G058690 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.3e-140
Identity = 256/279 (91.76%), Postives = 269/279 (96.42%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRE+REGLSP DLDELRREVQTAL
Sbjct: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEG+QPL
Sbjct: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWVNLNEEECNDLATFLSG+S+VP+SAKTESSVCRSSAKSSI ENHER+VADMN TSTCS
Sbjct: 121 RWVNLNEEECNDLATFLSGVSEVPQSAKTESSVCRSSAKSSIYENHERVVADMNPTSTCS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQ 240
           LSNSSKMKG++YV+AVDIDS KVKDLEVKESFRRVDDALC+MDRS K RRA+PPT PDLQ
Sbjct: 181 LSNSSKMKGNKYVDAVDIDSPKVKDLEVKESFRRVDDALCKMDRSTKVRRASPPTVPDLQ 240

Query: 241 IVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQ 280
           IVI+DENQERKQSITSLE SRKGKS S+FWK GCGNFSQ
Sbjct: 241 IVIVDENQERKQSITSLEASRKGKSASVFWKRGCGNFSQ 279

[Close]
BLAST of Lsi11G007550 vs. TrEMBL
Match: M5XCF7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008153mg PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 7.1e-67
Identity = 149/290 (51.38%), Postives = 188/290 (64.83%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VA+SFDLWKKD FF AAE+VQESAD ME  YR W+R+KRE L+P +LDEL RE+QTAL
Sbjct: 1   MMVASSFDLWKKDVFFPAAEEVQESADIMESTYRAWVRQKRERLAPDNLDELCRELQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVR+SY  R ++H   RH+ FIAAI NQISHVE ALR+S+  EGKQPL
Sbjct: 61  GTAKWQLEEFEKAVRLSYGQRGDDHTTARHKQFIAAIENQISHVETALRESFSVEGKQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWV+L+EEEC+D A FLSG  Q    AK E      S KSS   +  R   D+   + CS
Sbjct: 121 RWVHLDEEECDDFAAFLSGTPQSLLCAKNEYVELGPSVKSSEENDFRRKDVDLKSNAACS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAPDL 240
              S ++KG + V  +  D   V +++ KE     DD + + DR+   R+A + P   DL
Sbjct: 181 RDISDEIKGVKDVITISKDLNFVMEVKGKEIAEMRDDIIYDADRTTNTRKACSSPNYGDL 240

Query: 241 QIVILDENQERKQSITSLEVSRKGK-SGSIFWKHGCGNFSQVSIAGNCFN 289
           +I+I DE + RK+ I   E + K K S  +FWK  C    Q + A N FN
Sbjct: 241 RIIIADEVEHRKKLIPGCEDTPKEKGSKLVFWKQRCAQLHQATAAVNLFN 290

[Close]
BLAST of Lsi11G007550 vs. TrEMBL
Match: V4UQP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008878mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63
Identity = 143/293 (48.81%), Postives = 194/293 (66.21%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VANSFDLWKKD FFSAAE+VQESAD ME AYR W+++K EGL+P DL+EL RE+QTAL
Sbjct: 1   MMVANSFDLWKKDSFFSAAEEVQESADIMESAYRLWVKQKNEGLNPEDLNELSRELQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQL+EFE+A+R+S+     ++   RH  FI AI NQIS VEAALR+++++EGKQPL
Sbjct: 61  GTAKWQLDEFERAIRLSHGHCHNDYTKTRHGQFIEAIENQISCVEAALREAFNEEGKQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISEN-HERLVADMNLTSTC 180
           RW+ L+EEEC+DLA FLSG S    + K E      S K+S+ EN H+++   +NL +TC
Sbjct: 121 RWIELDEEECDDLAMFLSGNSSSSSTGKEECVKLTPSEKNSLLENTHKKIDTRLNLDATC 180

Query: 181 SLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAPD 240
           +  NS ++  S+   + D +   V ++E +ES  R DD +C+ D++   RR  + P    
Sbjct: 181 ATQNSDELTSSKAAVSFDKNRDCVIEIE-EESPGRRDDIICKSDKATGTRRPWSSPNFAS 240

Query: 241 LQIVILDENQERKQSITSLEVSRKGK-SGSIFWKHGCGNFSQVSIAGNCFNLV 291
           L+I I +EN E    +   E + K K S  +FWKH C    Q    GN F+ V
Sbjct: 241 LKIAIANENGEDSNLMAMTESTPKEKGSKPVFWKHMCTELPQAKGTGNLFHQV 292

[Close]
BLAST of Lsi11G007550 vs. TrEMBL
Match: A0A067E5J1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019964mg PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63
Identity = 143/293 (48.81%), Postives = 194/293 (66.21%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VANSFDLWKKD FFSAAE+VQESAD ME AYR W+++K EGL+P DL+EL RE+QTAL
Sbjct: 1   MMVANSFDLWKKDSFFSAAEEVQESADIMESAYRLWVKQKNEGLNPEDLNELSRELQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQL+EFE+A+R+S+     ++   RH  FI AI NQIS VEAALR+++++EGKQPL
Sbjct: 61  GTAKWQLDEFERAIRLSHGHCHNDYTKTRHGQFIEAIENQISCVEAALREAFNEEGKQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISEN-HERLVADMNLTSTC 180
           RW+ L+EEEC+DLA FLSG S    + K E      S K+S+ EN H+++   +NL +TC
Sbjct: 121 RWIELDEEECDDLAMFLSGNSSSSSTGKEECVKLTPSEKNSLLENTHKKIDTRLNLDATC 180

Query: 181 SLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAPD 240
           +  NS ++  S+   + D +   V ++E +ES  R DD +C+ D++   RR  + P    
Sbjct: 181 ATQNSDELTSSKAAVSFDKNRDCVIEIE-EESPGRRDDIICKSDKATGTRRPWSSPNFAS 240

Query: 241 LQIVILDENQERKQSITSLEVSRKGK-SGSIFWKHGCGNFSQVSIAGNCFNLV 291
           L+I I +EN E    +   E + K K S  +FWKH C    Q    GN F+ V
Sbjct: 241 LKIAIANENGEDSNLMAMTESTPKEKGSKPVFWKHMCTELPQAKGTGNLFHQV 292

[Close]
BLAST of Lsi11G007550 vs. TrEMBL
Match: B9ILZ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s10110g PE=4 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 141/291 (48.45%), Postives = 189/291 (64.95%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VANSFDLW+KD FFSAAE+VQESAD ME AYR W REKREG  P DLDEL RE+QTAL
Sbjct: 1   MMVANSFDLWQKDAFFSAAEEVQESADAMESAYRVWTREKREGSEPEDLDELSRELQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFE+AV +S+  RS++    RH+ F+AAI +QIS VEAALR+++  EGKQPL
Sbjct: 61  GTAKWQLEEFERAVWLSHGHRSDDITASRHKQFVAAIESQISRVEAALREAFSGEGKQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISEN-HERLVADMNLTSTC 180
           RWVNL++EEC+DLA FLSG  Q+P+  K + +  +S  K S+ EN H+R   D N ++ C
Sbjct: 121 RWVNLDKEECDDLAMFLSGTVQIPQIVKDDCTTLKSPMKGSLGENHHKRRNLDHNSSANC 180

Query: 181 SLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAPD 240
           S                       +D+E KE+    +D +C++D++  +RR  + P    
Sbjct: 181 S-----------------------RDIEEKENLGMRNDIICQVDKTIGSRRTWSSPNFGA 240

Query: 241 LQIVILDENQERKQSITSLEVSRKGKS-GSIFWKHGCGNFSQVSIAGNCFN 289
           L+IVI  ++ +R + ++S+E + K K     FWK  CG  SQ   +   FN
Sbjct: 241 LKIVIAQDDGQRDKVMSSVEATPKEKGYKPFFWKQRCGEHSQAKGSITLFN 268

[Close]
BLAST of Lsi11G007550 vs. TAIR10
Match: AT4G30240.1 (AT4G30240.1 Syntaxin/t-SNARE family protein)

HSP 1 Score: 185.7 bits (470), Expect = 4.3e-47
Identity = 115/287 (40.07%), Postives = 171/287 (59.58%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VANSFDLW+KD FFSAAE+VQESAD ME AYR W +EKR+G    + DEL +E+Q AL
Sbjct: 1   MMVANSFDLWQKDVFFSAAEEVQESADIMESAYRLWFKEKRDGRVSVESDELCKELQAAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
            TAKWQLEEFE+AV +S+ +  ++  L RH+ F+ AI NQI  VE+ L +S  + GKQPL
Sbjct: 61  STAKWQLEEFERAVSLSHGNCRDDTTLTRHKQFVTAIENQIYQVESTLLESLSENGKQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWV+LN+EE +DLA FLSG SQ   S  ++S   R S+ SS++EN   +           
Sbjct: 121 RWVDLNKEERDDLAMFLSGSSQTSESLNSDSINLRDSSTSSVAENPRGI----------- 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAPDL 240
              + + +G  Y ++ D   + + D+   ES           D+    RR  + P  P++
Sbjct: 181 ---NGRREGRCYGDSPDC-VIDIDDIGSPES----------ADKKGGTRRTWSSPNVPNI 240

Query: 241 QIVILD-----ENQERKQSITSLEVSRKGKSGS-IFWKHGCGNFSQV 281
             + ++     + +ER++ ++ +E + K K    +FW   C +++Q+
Sbjct: 241 SALRINVPVNAKEEEREKFLSHIEDTPKEKGAKPMFWLQRCRDYNQL 262

[Close]
BLAST of Lsi11G007550 vs. TAIR10
Match: AT2G18860.1 (AT2G18860.1 Syntaxin/t-SNARE family protein)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-43
Identity = 123/316 (38.92%), Postives = 174/316 (55.06%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+V NSFDLW+KD FFSAAE+VQ+S D ME AYR WIREK+        DE+ +E+Q AL
Sbjct: 1   MMVVNSFDLWQKDVFFSAAEEVQKSTDIMESAYRLWIREKK--------DEICKELQAAL 60

Query: 61  GTAKWQLEEFEKAVRVSY-RSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQP 120
           GTAKWQLEEFEKAVR+S+ R    +    RH+ F+ AI NQI  VE +L+++Y + GK+P
Sbjct: 61  GTAKWQLEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETSLQEAYSENGKKP 120

Query: 121 LRWVNLNEEECNDLATFLSGISQVPRSAKTESSV-CRSSAKSSISENHERLVADMNLTST 180
           LRWV+LNEEE +DLA FLSG S+  +S   ESS+  R S  SS+ EN   + A +     
Sbjct: 121 LRWVDLNEEERDDLAMFLSGSSRTSQSFSGESSIKSRESTNSSLVENVMEVSAKVTF--- 180

Query: 181 CSLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRA-NPPTAP 240
                 +K+ G      +DI+              RV     + ++S   RR  + P   
Sbjct: 181 ----KKAKVYGDGSECVIDIE-------------ERVTPG--QAEKSVGLRRIWSSPNFN 240

Query: 241 DLQIVIL--DENQERKQSITSLEVSRKGK-SGSIFWKHGCGNFSQVSIAGNCFN------ 298
            L+I++   D  +E++  +  +E + K K + S+ W     + +Q+     CF       
Sbjct: 241 SLRIIVPGGDNEEEKETLVAQIEATPKVKGTKSVLWMQRLPDHNQLFDKTGCFQNPIRLP 286

[Close]
BLAST of Lsi11G007550 vs. TAIR10
Match: AT1G27700.1 (AT1G27700.1 Syntaxin/t-SNARE family protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-32
Identity = 71/159 (44.65%), Postives = 104/159 (65.41%), Query Frame = 1 

Query: 3   VANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTALGT 62
           +  S D W+KD FF AAE+VQESAD ME AYRTW+  KR+     D ++L R++  ALGT
Sbjct: 1   MTTSLDRWEKDPFFPAAEEVQESADRMESAYRTWLNGKRDSSKVWDSEQLHRDLHAALGT 60

Query: 63  AKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPLRW 122
            KWQL+EF+KAV+ SY +R  +   +RHR F   +  Q+S +E +L+++   +GK   RW
Sbjct: 61  TKWQLDEFQKAVKSSYDNRLSDETRDRHREFTFVMEAQVSKIEKSLKEAAQSDGKGTPRW 120

Query: 123 VNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSS 162
           V L+E++ N+LA FL+G S+   SAK   +  R +A ++
Sbjct: 121 VRLDEDDRNELALFLTGPSE---SAKANPNGHRRTASAA 156

[Close]
BLAST of Lsi11G007550 vs. NCBI nr
Match: gi|700206017|gb|KGN61136.1| (hypothetical protein Csa_2G058690 [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 9.0e-140
Identity = 256/279 (91.76%), Postives = 269/279 (96.42%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRE+REGLSP DLDELRREVQTAL
Sbjct: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEG+QPL
Sbjct: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWVNLNEEECNDLATFLSG+S+VP+SAKTESSVCRSSAKSSI ENHER+VADMN TSTCS
Sbjct: 121 RWVNLNEEECNDLATFLSGVSEVPQSAKTESSVCRSSAKSSIYENHERVVADMNPTSTCS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQ 240
           LSNSSKMKG++YV+AVDIDS KVKDLEVKESFRRVDDALC+MDRS K RRA+PPT PDLQ
Sbjct: 181 LSNSSKMKGNKYVDAVDIDSPKVKDLEVKESFRRVDDALCKMDRSTKVRRASPPTVPDLQ 240

Query: 241 IVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQ 280
           IVI+DENQERKQSITSLE SRKGKS S+FWK GCGNFSQ
Sbjct: 241 IVIVDENQERKQSITSLEASRKGKSASVFWKRGCGNFSQ 279

[Close]
BLAST of Lsi11G007550 vs. NCBI nr
Match: gi|778667451|ref|XP_011648929.1| (PREDICTED: uncharacterized protein LOC101213145 [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 9.0e-140
Identity = 256/279 (91.76%), Postives = 269/279 (96.42%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRE+REGLSP DLDELRREVQTAL
Sbjct: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEG+QPL
Sbjct: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWVNLNEEECNDLATFLSG+S+VP+SAKTESSVCRSSAKSSI ENHER+VADMN TSTCS
Sbjct: 121 RWVNLNEEECNDLATFLSGVSEVPQSAKTESSVCRSSAKSSIYENHERVVADMNPTSTCS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQ 240
           LSNSSKMKG++YV+AVDIDS KVKDLEVKESFRRVDDALC+MDRS K RRA+PPT PDLQ
Sbjct: 181 LSNSSKMKGNKYVDAVDIDSPKVKDLEVKESFRRVDDALCKMDRSTKVRRASPPTVPDLQ 240

Query: 241 IVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQ 280
           IVI+DENQERKQSITSLE SRKGKS S+FWK GCGNFSQ
Sbjct: 241 IVIVDENQERKQSITSLEASRKGKSASVFWKRGCGNFSQ 279

[Close]
BLAST of Lsi11G007550 vs. NCBI nr
Match: gi|659069775|ref|XP_008451732.1| (PREDICTED: uncharacterized protein LOC103492935 isoform X1 [Cucumis melo])

HSP 1 Score: 495.7 bits (1275), Expect = 5.5e-137
Identity = 251/280 (89.64%), Postives = 268/280 (95.71%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRE+REGLSP DLDELRREVQTAL
Sbjct: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVRV+ RSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEG+QPL
Sbjct: 61  GTAKWQLEEFEKAVRVNCRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWVNLNEEECNDLATFLSG+S+VP+SAKTESS+CRSSAKSSI ENHER+VADMN TSTCS
Sbjct: 121 RWVNLNEEECNDLATFLSGVSEVPQSAKTESSLCRSSAKSSIYENHERVVADMNPTSTCS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQ 240
           LSNSSKMKG++YV+AVDIDS KVKDLEVKE+F RVDDALC+MDRS K RRA+PPT PDLQ
Sbjct: 181 LSNSSKMKGNKYVDAVDIDSSKVKDLEVKENFGRVDDALCKMDRSTKVRRASPPTVPDLQ 240

Query: 241 IVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQV 281
           IVI+DENQERKQSITSLEVSRKGKSG +FWK GCG FSQ+
Sbjct: 241 IVIVDENQERKQSITSLEVSRKGKSGPVFWKRGCGKFSQL 280

[Close]
BLAST of Lsi11G007550 vs. NCBI nr
Match: gi|659069779|ref|XP_008451747.1| (PREDICTED: uncharacterized protein LOC103492935 isoform X2 [Cucumis melo])

HSP 1 Score: 495.7 bits (1275), Expect = 5.5e-137
Identity = 251/280 (89.64%), Postives = 268/280 (95.71%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRE+REGLSP DLDELRREVQTAL
Sbjct: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFEKAVRV+ RSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEG+QPL
Sbjct: 61  GTAKWQLEEFEKAVRVNCRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPL 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENHERLVADMNLTSTCS 180
           RWVNLNEEECNDLATFLSG+S+VP+SAKTESS+CRSSAKSSI ENHER+VADMN TSTCS
Sbjct: 121 RWVNLNEEECNDLATFLSGVSEVPQSAKTESSLCRSSAKSSIYENHERVVADMNPTSTCS 180

Query: 181 LSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDLQ 240
           LSNSSKMKG++YV+AVDIDS KVKDLEVKE+F RVDDALC+MDRS K RRA+PPT PDLQ
Sbjct: 181 LSNSSKMKGNKYVDAVDIDSSKVKDLEVKENFGRVDDALCKMDRSTKVRRASPPTVPDLQ 240

Query: 241 IVILDENQERKQSITSLEVSRKGKSGSIFWKHGCGNFSQV 281
           IVI+DENQERKQSITSLEVSRKGKSG +FWK GCG FSQ+
Sbjct: 241 IVIVDENQERKQSITSLEVSRKGKSGPVFWKRGCGKFSQL 280

[Close]
BLAST of Lsi11G007550 vs. NCBI nr
Match: gi|731408387|ref|XP_010656834.1| (PREDICTED: uncharacterized protein LOC100252969 [Vitis vinifera])

HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68
Identity = 149/292 (51.03%), Postives = 197/292 (67.47%), Query Frame = 1 

Query: 1   MLVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGLSPGDLDELRREVQTAL 60
           M+VANSFDLW+KD FFSAAE+VQESAD ME AYRTW+RE+REGL+  DLDEL RE++TAL
Sbjct: 1   MMVANSFDLWQKDAFFSAAEEVQESADIMESAYRTWVRERREGLTHEDLDELYRELKTAL 60

Query: 61  GTAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGKQPL 120
           GTAKWQLEEFE+AVR+S+R R +++   RHR FIAAI NQISHVE ALR+S+++EGKQP 
Sbjct: 61  GTAKWQLEEFERAVRLSHRQRCDDNTTARHRQFIAAIENQISHVEEALRESFNEEGKQPP 120

Query: 121 RWVNLNEEECNDLATFLSGISQVPRSAKTESSVCRSSAKSSISENH-ERLVADMNLTSTC 180
           +WVNL++EE +DLA FLSG S   ++AK E      S K S  ENH +R   D NL + C
Sbjct: 121 QWVNLDQEERDDLALFLSGTSGTLQNAKEEHVELGHSMKGSPRENHYKRKETDFNLNAAC 180

Query: 181 SLSNSSKMKGSEYVNAVDIDSLKVKDLEVKESFRRVDDALCEMDRSAKARRANPPTAPDL 240
           +     ++KG + V  ++ D+  + +LE KE+    DD  C+ DR+   RR         
Sbjct: 181 NRDMPDEIKGFKDVVTINKDATYIIELEAKEAPGTRDDINCQADRTTGTRRTGNSPPGSW 240

Query: 241 QIVILDENQERKQSITSLEVSRKGK-SGSIFWKHGCGNFSQVSIAGNCFNLV 291
           +IVI DE++  K+ + S+E + KGK S ++ WK   G   Q     N FN +
Sbjct: 241 KIVIADEDEHSKKLVPSIEATPKGKGSKAVLWKQRWGEHPQAKRGINWFNQI 292

The following BLAST results are available for this feature:
BLAST of Lsi11G007550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi11G007550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMD6_CUCSA6.3e-14091.76Uncharacterized protein OS=Cucumis sativus GN=Csa_2G058690 PE=4 SV=1[more]
M5XCF7_PRUPE7.1e-6751.38Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008153mg PE=4 SV=1[more]
V4UQP4_9ROSI1.3e-6348.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008878mg PE=4 SV=1[more]
A0A067E5J1_CITSI1.3e-6348.81Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019964mg PE=4 SV=1[more]
B9ILZ8_POPTR1.6e-6348.45Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s10110g PE=4 SV=2[more]
BLAST of Lsi11G007550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30240.14.3e-4740.07 Syntaxin/t-SNARE family protein[more]
AT2G18860.11.7e-4338.92 Syntaxin/t-SNARE family protein[more]
AT1G27700.13.9e-3244.65 Syntaxin/t-SNARE family protein[more]
BLAST of Lsi11G007550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206017|gb|KGN61136.1|9.0e-14091.76hypothetical protein Csa_2G058690 [Cucumis sativus][more]
gi|778667451|ref|XP_011648929.1|9.0e-14091.76PREDICTED: uncharacterized protein LOC101213145 [Cucumis sativus][more]
gi|659069775|ref|XP_008451732.1|5.5e-13789.64PREDICTED: uncharacterized protein LOC103492935 isoform X1 [Cucumis melo][more]
gi|659069779|ref|XP_008451747.1|5.5e-13789.64PREDICTED: uncharacterized protein LOC103492935 isoform X2 [Cucumis melo][more]
gi|731408387|ref|XP_010656834.1|3.2e-6851.03PREDICTED: uncharacterized protein LOC100252969 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR015260Syntaxin-6_N
IPR010989SNARE
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0044763 single-organism cellular process
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G007550.1Lsi11G007550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010989t-SNAREunknownSSF47661t-snare proteinscoord: 12..109
score: 4.63
IPR015260Syntaxin 6, N-terminalPFAMPF09177Syntaxin-6_Ncoord: 13..104
score: 1.3
NoneNo IPR availableGENE3DG3DSA:1.20.58.90coord: 10..110
score: 7.4
NoneNo IPR availablePANTHERPTHR34949FAMILY NOT NAMEDcoord: 4..177
score: 4.7
NoneNo IPR availablePANTHERPTHR34949:SF1SUBFAMILY NOT NAMEDcoord: 4..177
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G007550Csa2G058690Cucumber (Chinese Long) v2culsiB098
Lsi11G007550Csa1G423110Cucumber (Chinese Long) v2culsiB007
Lsi11G007550CSPI02G05990Wild cucumber (PI 183967)cpilsiB096
Lsi11G007550CSPI01G20250Wild cucumber (PI 183967)cpilsiB008
Lsi11G007550Cucsa.089380Cucumber (Gy14) v1cgylsiB100
Lsi11G007550CmaCh05G006840Cucurbita maxima (Rimu)cmalsiB709
Lsi11G007550CmaCh12G008790Cucurbita maxima (Rimu)cmalsiB154
Lsi11G007550CmoCh12G008870Cucurbita moschata (Rifu)cmolsiB143
Lsi11G007550CmoCh05G007200Cucurbita moschata (Rifu)cmolsiB703
Lsi11G007550Cla018826Watermelon (97103) v1lsiwmB121
Lsi11G007550Cla022823Watermelon (97103) v1lsiwmB117
Lsi11G007550MELO3C004028Melon (DHL92) v3.5.1lsimeB115
Lsi11G007550MELO3C017467Melon (DHL92) v3.5.1lsimeB100
Lsi11G007550ClCG06G013310Watermelon (Charleston Gray)lsiwcgB108
Lsi11G007550ClCG11G012180Watermelon (Charleston Gray)lsiwcgB083
Lsi11G007550MELO3C004028.2Melon (DHL92) v3.6.1lsimedB123
Lsi11G007550MELO3C017467.2Melon (DHL92) v3.6.1lsimedB106
Lsi11G007550Cla97C11G218080Watermelon (97103) v2lsiwmbB078
Lsi11G007550Cla97C06G122750Watermelon (97103) v2lsiwmbB095
Lsi11G007550Bhi02G000574Wax gourdlsiwgoB144
Lsi11G007550Bhi06G001128Wax gourdlsiwgoB109
Lsi11G007550Cp4.1LG04g13030Cucurbita pepo (Zucchini)cpelsiB530
Lsi11G007550Cp4.1LG11g06390Cucurbita pepo (Zucchini)cpelsiB076
Lsi11G007550Cp4.1LG11g06010Cucurbita pepo (Zucchini)cpelsiB070
Lsi11G007550Cp4.1LG07g07260Cucurbita pepo (Zucchini)cpelsiB654
Lsi11G007550CsGy1G020080Cucumber (Gy14) v2cgyblsiB009
Lsi11G007550CsGy2G006110Cucumber (Gy14) v2cgyblsiB089
Lsi11G007550Carg09024Silver-seed gourdcarlsiB537
Lsi11G007550Carg27564Silver-seed gourdcarlsiB202
Lsi11G007550Carg08373Silver-seed gourdcarlsiB052
Lsi11G007550CsaV3_2G008360Cucumber (Chinese Long) v3cuclsiB108
Lsi11G007550CsaV3_1G031570Cucumber (Chinese Long) v3cuclsiB007
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi11G007550Lsi06G011720Bottle gourd (USVL1VR-Ls)lsilsiB058
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G007550Cucurbita maxima (Rimu)cmalsiB050
Lsi11G007550Cucurbita maxima (Rimu)cmalsiB099
Lsi11G007550Cucurbita maxima (Rimu)cmalsiB104
Lsi11G007550Cucurbita moschata (Rifu)cmolsiB036
Lsi11G007550Cucurbita moschata (Rifu)cmolsiB092
Lsi11G007550Cucurbita moschata (Rifu)cmolsiB086
Lsi11G007550Cucurbita pepo (Zucchini)cpelsiB283
Lsi11G007550Silver-seed gourdcarlsiB723