Lsi11G007270 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G007270
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUBX domain-containing 6
Locationchr11 : 7908560 .. 7914943 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTCTCGGTCTTCTTCATACTCAATTTTCAAATCGTCTTGCACCATTCTCGTACGAAAAGAACCTACCCTCCTTGCAATTCTCCGTCCTGTGCTTCAATTTCTTGTTCCGCAATCGATAAAGTTTAGTTTTATGATATTGTTTTTAATTCAATCTTGTTTTGTGTTCATCTGAGGTGGAAAAGTTAATTGGTTTTCTTAGAATCCCAAAAGCCCTTTTGAAATTTGATATTATATTGGGGAATTTATCAGCATTTCTTTTTCCTTTTGTGTAGAATTGAATTTTTCTTTGAGATATTAGTTCTTTAGTTACTTTGAACTTGAATCTCTGAATGTGAGGTTCAGCACTAATGTTTGTTCTTAGGAGCAGTTATGATTTGGTAATTTGTTATTAATTGAAATTTGATTTCTCTTATAGGAATGGCTTTTCTAGAGGTAAAACAAAAACTCCTGAGCGAGATTGAAGCTCTAGGATTCCCGAGGGCTCGAGTCGTCCGAGCACTTCATAGTACCGGTGAGAATAATTGACGACATTCATAGGTTGAGGATATCAATATATATTATACTATGATTTGTTATATGACAAAATATTTGGGTTTTTCGTATGGGTGACCCAAAATTTGAGCCCAAAATGAAATGGTCCACCTTTTCAAACCAAATTTTTTTTTACCATTTGCTTACGTCATATCAGTGTGAATTTACCAAAATGGACCATTGTGTATGCAAATTAGGATCTCACTCTTGCTCCCTCGTTTCTCAAGCACTTCTTGCTTCTTTGGGTTTAGATTTTTCAGCTCATTATTCTCTCTATTTTCTCTCCCTCGCTAGTTCTCACTCTCGCTTTTCTTGCTCCTTTGGGTTTGGATTTTTTTGCTCCTCACCCTTTCTATTTCTCTCGTTCTTGCTCTCGCTCTTTACTCTATAATACCAGGAGCCTAGTACGTGCACACAATAAGGTCGTTTTGCTATTTTCTGCATATGATGACGCAAGCAAAAGGTTAAAAAAAAAACTTGGTTTTATGAAGTGGGTATATTTGATTTTGGGCCTAAAATTTGGGTCACGGTACAATTATCTCAAAATATTTGAGTCATTGATTAATGTACATTCGTCTGTTTCTTTATCCATTGTAGTCTTACTTTTTCAGTTGTAGGAACCATTTCACTCTTTATTTTTTCACTCTGTCTGAATGGCGATGATAAACGTTTGAGAATGAAAAACAATACTCTTCATTTAATTTTGCATACCAAATGTACAGCTAAAGATTGATGAAAGAGGACTGAGAACCTCGCATCTACAACATCAACTATTCCATCTTTTGCTGCAATTTAGAGTTAAAATAATTGGATTATCGACTGTTTATCATTCTCAGAAAAGTACTTTCTTTGTTCTTCAGGCAATGTCAGCTCTGAAGCTGCAATTAATTGGCTCATTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCTGGTATAATTCTATATTTATATAGTTTTCTTCATTACATTCCATTCATTCAGTTAGATCTCTAAATAGATTGCATGTATTCTTTATGGTCAAAATATTATTGCAATTTAAGTATCAATGTCAAACTCTTGTAAACTAGCTCTAAAAGACTATAAATCAGGATTTTTGCTATAAAAGTGGTGGATAGAGTAGATTTGAGTTTAACGCTGATAAATAATACTAAGGAATACTATGCAGGTAGCAGTAGACATTGATATTGAATCTCCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGTATTGAGTCATAATTTGTTTATTGTGAAAGACTTTAATGCTTTACACTTTTTTTCACAATAAAATTAATAACTAAGCCATTTTATTTCACTCTAGAGCCATCTTAAACTTGGAATTGTTTTATCTGAAGGTGCCTTCATATTAAATTCTTGTTGATTTTCTTATGTTTAGGGATCAAATAGGGAAAGGAAAGGAAATAGAAGAAAAAATGTTAGAAAGACAAAGGGAGAAGGTACCACGTTCAAATCTTTGATTTCTCCATCTTATTCTTTTTAACTAGTTGAAGATTATTTTCTTTAAACATAGTAATTAGCAATAGTTACATATCAACAGAACTGCTAGATGAAGATTTGTAAATTGAGCATTGATAATGCAATTGCCTTTTTGTACCCTTTGGATATCTTTGAATATTTCATTCATCAATGAGATCGTTTCATGTTTCTTATCCCAAAAAAAAAAAAAAAAAAAAAAAAACATAGTGCAATTGCCAGAAAATTTACCATTATGTGTGTTAGATGCTATCTTATATATCTTGCCATGGTTTTGCAAATCATTCAATTATAACCATTTATTCTTTCACCATTTGGTGACTAGTTTTGTAATTGTGGGTACAAAAATTTAAGCGCTGACCACTTGCTATGCCCTCCAGTCTCAAATCATGAGTATATATTTTGATTTTGGTTCCATATGTTGGATTTGATGCTATTTGTAAGCTTAACTGTATGCTAATTTTCATGATCTAATGCTTGGTATCTTTATAGGATAGAACCCATGCCAGTAAACTCCGTACCAGTAAAATCCATGCCAGTAAAGAACTACAAGAAGCAAAAAGAATTGCAGAAGAAATTGAAAGGAAACGGTGTGTCTTCTGTATCAATCCCGTTTTTGGTTTTCTTCTCTGTCACTGAAAGCATTATTACTCTGTCTGAAGTGAAATATTTGTTCCTTTTTGCTCAGTAATATAGATTCTAGGCAAGCTGCGAAAGAGGAGGAGAAAAGAGCAAGGGAAAAAGTTTTACAAAGACTTGAACAAGATATGGTTTGCTTTCTCCACCACTTCTTTTGTCTTATATTAACCACTAATATATTTATCTGAGTGGGATATATTTGAGAGATATCCCATTTTCATTCTCATGATTCCCCAGGATTTATAGTTAAATATCTTATTTTTGTTTCCAACATGTGATCGCTTCATCAAGTCGGGTTTCTGTCCGGAAATTCTGTTCTTCATGCTGCTGTTCTTTACTAGTTGTTACTGTCTTGTGTAGTTTCTGTAATATAGTTGTCCTTGCTGCTTAGTTATGTTGTAGTCTTCAACTAGGAGGTTGCTGCCTATCTGATTGTGCCTTCTCTGGTTTGGTACTAACGTCGGTTGTATACTGGTTTTTACTAGTCTCAAAGCCTTAACAATCCAAATCTAAATTTTATTTCCTTCAAGATGGCTAAATTATAGGTTTAGTCTTTGAATTTTTCAGGTGTGTCAAATAAGTCCCTGAATTTTAAAAAGTTTCTTTTTAAGTCCCTAAACCTTTTATTTTGTGTCTAATTAGTCCTTGAACTTTATAAAGGGTCTAAAAAGCCCCTAAACTTTTGATCTTTCAATTTTTTCTATTAGGTCCTTGACCAATTCGATAATTGTTAAAATTTACAAATCTATTGGCCACAAGGTTGAAAGTTTAATGATCTATTAGATGCAAAATTCAATTTTATATGTAATAGATTCGTTAGTTTTAAAACATGTTGAATATATTAAGGATTTAGTAGACATTAAGTAAAAAGTTTTGGGACCTATTAAACACAAAATTGAAAGTTTAATGACCTTCAAGATACAGGAAAAAGGTTTTGGGACCCAAACTTCTAATTTAACAAACAAATATTTCTTTCTTATATTTCTAGACATCTTATTTTCCCTATATCTTCTTAACAACTTTTATTTCTTCTCGTCTTAAAATTTATAAATCCCAAGAACCTTCACGAGCGTGGAGCCGTCCATGCAATTTCCAAGGCCTGAACTCTGCCCTGATGCTGATGACTGACCTTCTTCACGTTTGTGAGACAACCTCTCAGAAATATCATTTTTTGATTGTCAGGGCAGAAAAACCATTCTGATCATTGTAATATTTATAGTTTCTGCCAGTTGCTGTTGCATTACTCGTTAATTTTAACTAAGATCATATCCTGGATAAATATCACTGAGACTAAGGATACTTTGTATAACTATAGCTATATCAGGCCTGTTGACAAGAAGGCTATAATTTTGTTGCTTCTTTTGAGCTAAGAGAACTGCATTCATTGGGGAAAAATGAAAATACAAAATGGTCAAAGAGTGGCACAAACCAAAACCAAGCAGAGTATCCTCCAAAAGGAAGAAAGAAAGAAAAAAGCCTGGTGCAAAGAAGCTTATTAACAATAATCATGGCTTACAGTTCCTTTTTCTTTTTCTTTTCTTAATGTTCTTTTTGGGTATTGACAAATTGTTTCCTGTCTACATCCTTCATTGCAGACTCGTATGCATTATAAAAATTTTATGCACATCTGTGCAGATTGAAAGAAAGAGGAATCGTGGAATGCCCTCAGAAAGGTCTGAAAGCCTTGCTACAAAAGCTACCACAACCGGAGCAGGGGAAAAGGATAAACTTAGATCACAGAATTCTCTGCCAGCAACTTCAGTTAGCAAAGCAGTCTCTATGAGAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGTAAAGATATCTATGGAAAATGTGCGGGTCATACCTTGATGAAGCATTCTTTTGAAGTTTTACTTTGATTACTACAAAATGTCACAACTGTAGTTTCATTCCTTCAAATAATCCTTTGTCAATCCTGCAGGCTGCAAGTGTAATTCATGATGCTGACTTCGTTTTCTTCTTGATAGATTTTCTTGTTTTTTTTTCTATGGGCAATAATAGACGGTAGGAACATGGAAATCCAAGAAAAAATTTCTTTCTTTAGGAGAAATTTCTATACTTATTCCTTTTCTTTCTTTCTTTACTTTTTTTTTTTTTTTTTTGTTGCTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

CTTTCTTTCTCGGTCTTCTTCATACTCAATTTTCAAATCGTCTTGCACCATTCTCGTACGAAAAGAACCTACCCTCCTTGCAATTCTCCGTCCTGTGCTTCAATTTCTTGTTCCGCAATCGATAAAGTTTAGTTTTATGATATTGTTTTTAATTCAATCTTGTTTTGTGTTCATCTGAGGTGGAAAAGTTAATTGGTTTTCTTAGAATCCCAAAAGCCCTTTTGAAATTTGATATTATATTGGGGAATTTATCAGCATTTCTTTTTCCTTTTGTGTAGAATTGAATTTTTCTTTGAGATATTAGTTCTTTAGTTACTTTGAACTTGAATCTCTGAATGAATGGCTTTTCTAGAGGTAAAACAAAAACTCCTGAGCGAGATTGAAGCTCTAGGATTCCCGAGGGCTCGAGTCGTCCGAGCACTTCATAGTACCGGCAATGTCAGCTCTGAAGCTGCAATTAATTGGCTCATTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCTGGTAGCAGTAGACATTGATATTGAATCTCCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGATAGAACCCATGCCAGTAAACTCCGTACCAGTAAAATCCATGCCAGTAAAGAACTACAAGAAGCAAAAAGAATTGCAGAAGAAATTGAAAGGAAACGATTCTAGGCAAGCTGCGAAAGAGGAGGAGAAAAGAGCAAGGGAAAAAGTTTTACAAAGACTTGAACAAGATATGATTGAAAGAAAGAGGAATCGTGGAATGCCCTCAGAAAGGTCTGAAAGCCTTGCTACAAAAGCTACCACAACCGGAGCAGGGGAAAAGGATAAACTTAGATCACAGAATTCTCTGCCAGCAACTTCAGTTAGCAAAGCAGTCTCTATGAGAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGATGATTCTGACAAAGTGAGAATTGCCTACCAAACCCTTTTCATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAGGTTTAGGAAGATTCGACTCAGTAATCCTTTGTTCCAGGAGAGAGTTGGGAGTTTGAAAGGAGGGATTGAGTTTCTCGAGCTTTGCGGCTTTCAGAAAGGAGGAGACTTTCTGTACCTTGCCCGTGATAAAGTCGACCCGCATGCTTTAGTCACTGCTGGATCACTGTTGAATTCTGCATTGACAAATCCTTTTTTTGGTGTTCTATAATAATCAGTTTGAGCTTATCACTAGGTAAAGCCAGTTTATTGAATTCGTCCAAAGCCAAAAGGAGAAGACATATAACCTTCTTGCTTTGGGATTTGAATTTGTACTTAAGAATATAATGGAATTACTATCATATAATGATTTTATAATAACAGATTATTATTTGAATGCATAAAATGAAACATTTTGGCTG

Coding sequence (CDS)

ATGGCTTTTCTAGAGGTAAAACAAAAACTCCTGAGCGAGATTGAAGCTCTAGGATTCCCGAGGGCTCGAGTCGTCCGAGCACTTCATAGTACCGGCAATGTCAGCTCTGAAGCTGCAATTAATTGGCTCATTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCTGGTAGCAGTAGACATTGATATTGAATCTCCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGATAGAACCCATGCCAGTAAACTCCGTACCAGTAAAATCCATGCCAGTAAAGAACTACAAGAAGCAAAAAGAATTGCAGAAGAAATTGAAAGGAAACGATTCTAGGCAAGCTGCGAAAGAGGAGGAGAAAAGAGCAAGGGAAAAAGTTTTACAAAGACTTGAACAAGATATGATTGAAAGAAAGAGGAATCGTGGAATGCCCTCAGAAAGGTCTGAAAGCCTTGCTACAAAAGCTACCACAACCGGAGCAGGGGAAAAGGATAAACTTAGATCACAGAATTCTCTGCCAGCAACTTCAGTTAGCAAAGCAGTCTCTATGAGAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGATGATTCTGACAAAGTGAGAATTGCCTACCAAACCCTTTTCATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAGGTTTAGGAAGATTCGACTCAGTAATCCTTTGTTCCAGGAGAGAGTTGGGAGTTTGAAAGGAGGGATTGAGTTTCTCGAGCTTTGCGGCTTTCAGAAAGGAGGAGACTTTCTGTACCTTGCCCGTGATAAAGTCGACCCGCATGCTTTAGTCACTGCTGGATCACTGTTGAATTCTGCATTGACAAATCCTTTTTTTGGTGTTCTATAA

Protein sequence

MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVDIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGAGEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVTAGSLLNSALTNPFFGVL
Homology
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BLAST of Lsi11G007270 vs. Swiss-Prot
Match: UBXN6_BOVIN (UBX domain-containing protein 6 OS=Bos taurus GN=UBXN6 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 1 

Query: 199 HHHKDDSDKVRIAYQTLFIYVRNVAKNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELC 258
           H    D D+V++   T+  Y+ N+  +P+EE++RKI++ N +FQER+  L+G  EF E  
Sbjct: 162 HTFNKDRDRVKLGVDTIAKYLDNIHLHPEEEKYRKIKVQNKVFQERIHCLEGTHEFFEAI 221

Query: 259 GFQK 263
           GFQK
Sbjct: 222 GFQK 225

[Close]
BLAST of Lsi11G007270 vs. Swiss-Prot
Match: UBXN6_MOUSE (UBX domain-containing protein 6 OS=Mus musculus GN=Ubxn6 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-09
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 1 

Query: 199 HHHKDDSDKVRIAYQTLFIYVRNVAKNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELC 258
           H    D D+V++   T+  Y+ N+  +P+EE+++KI+L N +FQER+  L+G  EF E  
Sbjct: 162 HTFNRDRDRVKLGVDTIAKYLDNIHLHPEEEKYQKIKLQNKVFQERINCLEGSHEFFEAI 221

Query: 259 GFQK 263
           GF+K
Sbjct: 222 GFKK 225

[Close]
BLAST of Lsi11G007270 vs. Swiss-Prot
Match: UBP14_SCHPO (Ubiquitin carboxyl-terminal hydrolase 14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp14 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 1 

Query: 4   LEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQ 55
           +E  Q  + +++A+GFP  R  RAL +TGN  +E A+NWL +H  DP+ID+
Sbjct: 575 IEWNQSAIEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEHMEDPEIDK 625

[Close]
BLAST of Lsi11G007270 vs. Swiss-Prot
Match: UBXN6_HUMAN (UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06
Identity = 58/210 (27.62%), Postives = 89/210 (42.38%), Query Frame = 1 

Query: 104 KKQKELQKKLKGNDSRQAAKEEEKRAREKVLQRLEQ-----------DMIERKRNRGMPS 163
           K  KE   +      RQ    E + A    L RLEQ           D I  +  + + +
Sbjct: 30  KAHKEKPNQPAPRPPRQGPTNEAQMAAAAALARLEQKQSRAWGPTSQDTIRNQVRKELQA 89

Query: 164 ERSESLATKATTTGAGEKDKLRSQNSL---------PATSVSKAVSMRE-CLRS--LRHH 223
           E + S + +A  T    + +      L         P T  +     R+ C++   L H 
Sbjct: 90  EATVSGSPEAPGTNVVSEPREEGSAHLAVPGVYFTCPLTGATLRKDQRDACIKEAILLHF 149

Query: 224 HKD--------------DSDKVRIAYQTLFIYVRNVAKNPDEERFRKIRLSNPLFQERVG 277
             D              D D+V++   T+  Y+ N+  +P+EE++RKI+L N +FQER+ 
Sbjct: 150 STDPVAASIMKIYTFNKDQDRVKLGVDTIAKYLDNIHLHPEEEKYRKIKLQNKVFQERIN 209

[Close]
BLAST of Lsi11G007270 vs. TrEMBL
Match: A0A0A0LMA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G049850 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.5e-117
Identity = 239/311 (76.85%), Postives = 261/311 (83.92%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           M F+EVKQKL+SE+EALGFPRARVVRALHSTGNVSSEAA++WLIDHENDPDIDQMP VAV
Sbjct: 26  MTFVEVKQKLMSEVEALGFPRARVVRALHSTGNVSSEAAVHWLIDHENDPDIDQMPPVAV 85

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQ----KELQK----- 120
           +IDIESPEPFHITEEMRRKAKELR +         +    +  K +    KELQ+     
Sbjct: 86  NIDIESPEPFHITEEMRRKAKELRDQVGKEKEREEQKFERQREKDRIRSSKELQEAKRIA 145

Query: 121 ----KLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 180
               + +  +SRQ  KEEEKRAREKV+Q++EQD IERKR  G+PSERSESLATKAT   A
Sbjct: 146 EEIERKRNINSRQVEKEEEKRAREKVVQKIEQDKIERKRFGGIPSERSESLATKATAARA 205

Query: 181 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPD 240
           GEKD+LRSQ SLPATSVSKAVSMRECLRSLRHHHKDDSDKVR AYQTLFIYVRNVAKNPD
Sbjct: 206 GEKDELRSQ-SLPATSVSKAVSMRECLRSLRHHHKDDSDKVRNAYQTLFIYVRNVAKNPD 265

Query: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVTAGSLLN 299
           EERFRKIRLSNPLFQERVGSLKGGIEFLELCGF+K G+FLYL RDK+D  AL TAGSLLN
Sbjct: 266 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFRKEGEFLYLPRDKIDLEALNTAGSLLN 325

[Close]
BLAST of Lsi11G007270 vs. TrEMBL
Match: A0A061DMF7_THECC (Ubiquitin-associated (UBA)/TS-N domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_002895 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.2e-75
Identity = 173/310 (55.81%), Postives = 216/310 (69.68%), Query Frame = 1 

Query: 4   LEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVDID 63
           +EVK KLL E+EA+GFPRAR VRALH +GN S +AA+NWLIDHEND DIDQMPLVA+++D
Sbjct: 10  MEVKMKLLGELEAVGFPRARAVRALHHSGNTSLDAAVNWLIDHENDADIDQMPLVAINLD 69

Query: 64  IESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKE------LQKKLKGND 123
           IESP+P  ITE ++ K +ELR + + +     +    +  KK++       LQ K    +
Sbjct: 70  IESPQPSDITEAIKIKEQELR-DRVRIRKEEEEKKSERERKKERIRAGKAFLQAKRIAEE 129

Query: 124 S--------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGAGE 183
           +        R+A KEEE+RAREKVLQ+LE D +ERKR  G+P E   S A K +     E
Sbjct: 130 NEQQRLLALRKAEKEEERRAREKVLQKLEVDKLERKRAHGLPLE---SRAVKPSGPIIQE 189

Query: 184 KDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPDEE 243
           K     ++SLP  SV K   MRECLRSL+H +KDD  +V+ A+QTL IYV NVA+ PDEE
Sbjct: 190 K-----KSSLPVKSVQKDEPMRECLRSLKHTYKDDHARVKRAFQTLLIYVGNVARMPDEE 249

Query: 244 RFRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGSLLN 298
           +FRKIRL NP FQERVGSLKGGIEFLELCGF++  G DFL   RDKV+   L +AGSLL 
Sbjct: 250 KFRKIRLGNPHFQERVGSLKGGIEFLELCGFERSEGSDFLIFPRDKVEIEVLNSAGSLLG 309

[Close]
BLAST of Lsi11G007270 vs. TrEMBL
Match: A0A0B0NFS2_GOSAR (UBX domain-containing 6 OS=Gossypium arboreum GN=F383_09198 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.3e-72
Identity = 168/310 (54.19%), Postives = 212/310 (68.39%), Query Frame = 1 

Query: 4   LEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVDID 63
           +EV   LL ++E+LGFPRAR VR LH TGN + E A+NWLIDHEND DIDQMPLV +++D
Sbjct: 10  MEVNMNLLGKLESLGFPRARAVRGLHHTGNTTVEDAVNWLIDHENDADIDQMPLVVINLD 69

Query: 64  IESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKL-------KGN 123
           IE+P+P  ITE ++ K +ELR      N    K +  +  K++    K L       + N
Sbjct: 70  IETPQPNDITEAIKLKEQELRDRVRMKNRDEEKKLEREREKERIRAGKALLEAKRIAEEN 129

Query: 124 DS------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGAGEK 183
           +       R+A KEEEKRAREKVL++L+ D +ERKR  G+P E     A         E+
Sbjct: 130 ERQRLLALRKAEKEEEKRAREKVLKKLDLDKLERKRALGLPLENR---AANPPLPSIQEE 189

Query: 184 DKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPDEER 243
                ++SLP  SVSKA  MRECLRSL+  +KDD+ KV+ A+QTL IYV NVA++PDEE+
Sbjct: 190 -----KSSLPVKSVSKADHMRECLRSLKLAYKDDNAKVKKAFQTLLIYVGNVARSPDEEK 249

Query: 244 FRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGSLLNS 299
           FRKIRLSNP FQERVGSLKGGI+FLELCGF++  G +FL   RDKVD  +L TAGSLL S
Sbjct: 250 FRKIRLSNPKFQERVGSLKGGIKFLELCGFERSEGDEFLVFPRDKVDVQSLNTAGSLLKS 309

[Close]
BLAST of Lsi11G007270 vs. TrEMBL
Match: A0A067L5H2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01111 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.1e-71
Identity = 158/309 (51.13%), Postives = 209/309 (67.64%), Query Frame = 1 

Query: 5   EVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVDIDI 64
           EV QKLL E+E +GFP+AR  RALH +GN S EAA+NW+++HENDPDID MP+V  + ++
Sbjct: 111 EVDQKLLEELEGMGFPKARATRALHYSGNASIEAAVNWIVEHENDPDIDDMPMVPANKNV 170

Query: 65  ESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKL-------KGND 124
           E P+P    EEM+ KA+EL+           K M  +  K++  + K+L       + N+
Sbjct: 171 EDPKPSLTPEEMKLKAQELKERARKKKEEEEKRMEREREKERIRIGKELLEAKRIEEENE 230

Query: 125 S------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGAGEKD 184
                  R+A KEEEKRAREK+ Q+LE+D  ER+R  G+P E  +    K +     EK 
Sbjct: 231 RKRILALRKAEKEEEKRAREKIRQKLEEDKAERRRKLGLPPE--DPTTVKPSAPVVEEK- 290

Query: 185 KLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPDEERF 244
               ++SLP    +K   MRECLRSL+ +HKDD  KV+ A+QTL  Y+ NVAKNP+EE++
Sbjct: 291 ----KSSLPIRPATKVEQMRECLRSLKQNHKDDDAKVKRAFQTLLTYIGNVAKNPNEEKY 350

Query: 245 RKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGSLLNSA 299
           RKIR++N  FQ+RVGSLKGGIEFLELCGF+K  GG+FL+LARDKVD   + +AGS LNSA
Sbjct: 351 RKIRVNNQTFQDRVGSLKGGIEFLELCGFEKIEGGEFLFLARDKVDMQVMNSAGSELNSA 410

[Close]
BLAST of Lsi11G007270 vs. TrEMBL
Match: A0A0D2ND72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G232900 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.8e-71
Identity = 164/310 (52.90%), Postives = 213/310 (68.71%), Query Frame = 1 

Query: 4   LEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVDID 63
           +EV   LL ++E+LGFPRAR VR LH TGN + E A+NWLIDHEND DIDQMPLV +++D
Sbjct: 10  MEVNMNLLGKLESLGFPRARAVRGLHYTGNTTVEDAVNWLIDHENDADIDQMPLVVINLD 69

Query: 64  IESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKL-------KGN 123
           +ESP+P  ITE ++ K +ELR      N    K +  +  K++    K L       + N
Sbjct: 70  VESPQPNDITEAIKLKEQELRDRVCMKNRDEEKKLEREREKERIRAGKALLEAKRIAEEN 129

Query: 124 DS------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGAGEK 183
           +       R+A +EEEKRAREKVL++L+ D +ERK+  G+P E     A K       E+
Sbjct: 130 ERKRLLALRKAEEEEEKRAREKVLKKLDLDKLERKQALGLPLENR---AAKPPLPSIQEE 189

Query: 184 DKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPDEER 243
                ++SLP  S++KA  MRECLRSL+  +KDD+ KV+ A+QTL IYV NVA++PDEE+
Sbjct: 190 -----KSSLPVKSITKADHMRECLRSLKLAYKDDNAKVKKAFQTLLIYVGNVARSPDEEK 249

Query: 244 FRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGSLLNS 299
           FRKIRLSNP FQERVGSLKGGI+FLELCGF++  G +FL   RDKVD  +L TAGS+L S
Sbjct: 250 FRKIRLSNPKFQERVGSLKGGIKFLELCGFERSEGDEFLVFPRDKVDVQSLNTAGSMLKS 309

[Close]
BLAST of Lsi11G007270 vs. TAIR10
Match: AT1G04850.1 (AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein)

HSP 1 Score: 261.9 bits (668), Expect = 4.7e-70
Identity = 151/313 (48.24%), Postives = 205/313 (65.50%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           M   +V   +L E+EA+GFP+AR  RALH +GN S EAA+NW+++HENDPD+D+MP V  
Sbjct: 106 MVVPDVDNNILEELEAMGFPKARATRALHYSGNASLEAAVNWVVEHENDPDVDEMPKVPS 165

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKL------- 120
           + ++   +P    EE++ KA+ELR           K M  +  K++  + K+L       
Sbjct: 166 NSNVGPAKPALTPEEVKLKAQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRME 225

Query: 121 KGNDS------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 180
           + N+       R+A KEEEKRAREK+ Q+LE+D  ER+R  G+P E   + A K +    
Sbjct: 226 EVNERKRLMFLRKAEKEEEKRAREKIRQKLEEDKAERRRKLGLPPEDPATAAAKPSVPVV 285

Query: 181 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPD 240
            EK     + +LP    +K   MRECLRSL+  HK+D  KV+ A+QTL  Y+ NVAKNPD
Sbjct: 286 EEK-----KVTLPIRPATKTEQMRECLRSLKQAHKEDDAKVKRAFQTLLTYMGNVAKNPD 345

Query: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGSL 299
           EE+FRKIRL+N  FQERVGSL+GGIEF+ELCGF+K  GG+FL+L RDK+D   + +AG+ 
Sbjct: 346 EEKFRKIRLTNQTFQERVGSLRGGIEFMELCGFEKIEGGEFLFLPRDKIDSAIINSAGTE 405

[Close]
BLAST of Lsi11G007270 vs. TAIR10
Match: AT5G48690.1 (AT5G48690.1 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060))

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-56
Identity = 139/314 (44.27%), Postives = 193/314 (61.46%), Query Frame = 1 

Query: 2   AFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAVD 61
           A +EV   LL E+E +GF  AR   ALH +GN S EAA+NW+IDHEN+   + MPLV  +
Sbjct: 8   AAIEVNHGLLKELEDMGFSMARAAWALHHSGNSSLEAAVNWIIDHENESQFENMPLVEFN 67

Query: 62  IDIESPEPFHIT--------EEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQKELQKKL 121
           I+IESP P   T        +E+  +A++LR E         +   ++  K+  E ++  
Sbjct: 68  IEIESPNPSDDTAETSHARAKELSEQARKLREEQETKREREREKERIRAGKELMETKRIA 127

Query: 122 KGNDS------RQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 181
           + N+       R+A K+EEK+AREK++ ++  D +ERKR  G+P+E +ES +T    +  
Sbjct: 128 EENERKRNIALRKAEKDEEKKAREKIMLKVNADKLERKRRLGLPTE-TESASTSNPVSPL 187

Query: 182 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKV-RIAYQTLFIYVRNVAKNP 241
             K  + S  S+    VSKA  MRECLRSLR +HKD+  ++ R  ++TL   VRNVAK P
Sbjct: 188 DPKRIVMSSPSV----VSKAEEMRECLRSLRRNHKDEDPRITRRVFETLLTIVRNVAKKP 247

Query: 242 DEERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVTAGS 299
           DEER+R+IRL N LF ERVG  K GIEF+ELCGF++  G +FL L++   D + L  A  
Sbjct: 248 DEERYRRIRLKNRLFHERVGRYKEGIEFMELCGFKRVEGSEFLSLSKRDSDINRLRDAAF 307

[Close]
BLAST of Lsi11G007270 vs. TAIR10
Match: AT2G01650.1 (AT2G01650.1 plant UBX domain-containing protein 2)

HSP 1 Score: 51.6 bits (122), Expect = 9.7e-07
Identity = 19/42 (45.24%), Postives = 30/42 (71.43%), Query Frame = 1 

Query: 220 RNVAKNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQ 262
           +N+ K P+  +FRK+R+SN   +E +G + GG+E LEL GF+
Sbjct: 191 KNIVKEPENAKFRKVRMSNAKIKEAIGDVAGGVELLELVGFE 232

[Close]
BLAST of Lsi11G007270 vs. NCBI nr
Match: gi|659069875|ref|XP_008452212.1| (PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 432.6 bits (1111), Expect = 5.7e-118
Identity = 240/311 (77.17%), Postives = 262/311 (84.24%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           MAFLE+KQKL+SE+EALGFPRARVVRALHSTGNVSSEAAI+WLIDHENDPDIDQMP VAV
Sbjct: 1   MAFLEIKQKLMSEVEALGFPRARVVRALHSTGNVSSEAAIHWLIDHENDPDIDQMPPVAV 60

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQ----KELQK----- 120
           +IDIESPEPFHITEEMRRKAKELR +         K++  +  K +    KELQ+     
Sbjct: 61  NIDIESPEPFHITEEMRRKAKELRDQVGKEKEKEGKNIERQREKDRIRSSKELQEAKRIA 120

Query: 121 ----KLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 180
               + +  +SRQ  KEEEKRAREKV+Q+LEQD IERKR  G+ SERSESLATKAT T A
Sbjct: 121 EEIERKRNINSRQVEKEEEKRAREKVVQKLEQDKIERKRFGGISSERSESLATKATATKA 180

Query: 181 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPD 240
           GEKD+ RSQNSLPATSVSKAVSMRECLRSLRHHHKD+ DKVR AYQTLFIYVRNVAKNPD
Sbjct: 181 GEKDEPRSQNSLPATSVSKAVSMRECLRSLRHHHKDNFDKVRNAYQTLFIYVRNVAKNPD 240

Query: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVTAGSLLN 299
           EERFRKIRLSNPLFQERVGSL GGIEFLELCGF+K G+FLYL  DK+DP AL TAGSLLN
Sbjct: 241 EERFRKIRLSNPLFQERVGSLTGGIEFLELCGFRKEGEFLYLPHDKIDPEALNTAGSLLN 300

[Close]
BLAST of Lsi11G007270 vs. NCBI nr
Match: gi|449462689|ref|XP_004149073.1| (PREDICTED: UBX domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-116
Identity = 239/311 (76.85%), Postives = 261/311 (83.92%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           M F+EVKQKL+SE+EALGFPRARVVRALHSTGNVSSEAA++WLIDHENDPDIDQMP VAV
Sbjct: 1   MTFVEVKQKLMSEVEALGFPRARVVRALHSTGNVSSEAAVHWLIDHENDPDIDQMPPVAV 60

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQ----KELQK----- 120
           +IDIESPEPFHITEEMRRKAKELR +         +    +  K +    KELQ+     
Sbjct: 61  NIDIESPEPFHITEEMRRKAKELRDQVGKEKEREEQKFERQREKDRIRSSKELQEAKRIA 120

Query: 121 ----KLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 180
               + +  +SRQ  KEEEKRAREKV+Q++EQD IERKR  G+PSERSESLATKAT   A
Sbjct: 121 EEIERKRNINSRQVEKEEEKRAREKVVQKIEQDKIERKRFGGIPSERSESLATKATAARA 180

Query: 181 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPD 240
           GEKD+LRSQ SLPATSVSKAVSMRECLRSLRHHHKDDSDKVR AYQTLFIYVRNVAKNPD
Sbjct: 181 GEKDELRSQ-SLPATSVSKAVSMRECLRSLRHHHKDDSDKVRNAYQTLFIYVRNVAKNPD 240

Query: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVTAGSLLN 299
           EERFRKIRLSNPLFQERVGSLKGGIEFLELCGF+K G+FLYL RDK+D  AL TAGSLLN
Sbjct: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFRKEGEFLYLPRDKIDLEALNTAGSLLN 300

[Close]
BLAST of Lsi11G007270 vs. NCBI nr
Match: gi|700205977|gb|KGN61096.1| (hypothetical protein Csa_2G049850 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-116
Identity = 239/311 (76.85%), Postives = 261/311 (83.92%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           M F+EVKQKL+SE+EALGFPRARVVRALHSTGNVSSEAA++WLIDHENDPDIDQMP VAV
Sbjct: 26  MTFVEVKQKLMSEVEALGFPRARVVRALHSTGNVSSEAAVHWLIDHENDPDIDQMPPVAV 85

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQ----KELQK----- 120
           +IDIESPEPFHITEEMRRKAKELR +         +    +  K +    KELQ+     
Sbjct: 86  NIDIESPEPFHITEEMRRKAKELRDQVGKEKEREEQKFERQREKDRIRSSKELQEAKRIA 145

Query: 121 ----KLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKATTTGA 180
               + +  +SRQ  KEEEKRAREKV+Q++EQD IERKR  G+PSERSESLATKAT   A
Sbjct: 146 EEIERKRNINSRQVEKEEEKRAREKVVQKIEQDKIERKRFGGIPSERSESLATKATAARA 205

Query: 181 GEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVAKNPD 240
           GEKD+LRSQ SLPATSVSKAVSMRECLRSLRHHHKDDSDKVR AYQTLFIYVRNVAKNPD
Sbjct: 206 GEKDELRSQ-SLPATSVSKAVSMRECLRSLRHHHKDDSDKVRNAYQTLFIYVRNVAKNPD 265

Query: 241 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVTAGSLLN 299
           EERFRKIRLSNPLFQERVGSLKGGIEFLELCGF+K G+FLYL RDK+D  AL TAGSLLN
Sbjct: 266 EERFRKIRLSNPLFQERVGSLKGGIEFLELCGFRKEGEFLYLPRDKIDLEALNTAGSLLN 325

[Close]
BLAST of Lsi11G007270 vs. NCBI nr
Match: gi|659069883|ref|XP_008452246.1| (PREDICTED: calponin homology domain-containing protein DDB_G0272472-like isoform X2 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 1.1e-87
Identity = 190/257 (73.93%), Postives = 208/257 (80.93%), Query Frame = 1 

Query: 55  MPLVAVDIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMPVKNYKKQ----KELQ 114
           MP VAV+IDIESPEPFHITEEMRRKAKELR +         K++  +  K +    KELQ
Sbjct: 1   MPPVAVNIDIESPEPFHITEEMRRKAKELRDQVGKEKEKEGKNIERQREKDRIRSSKELQ 60

Query: 115 K---------KLKGNDSRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATK 174
           +         + +  +SRQ  KEEEKRAREKV+Q+LEQD IERKR  G+ SERSESLATK
Sbjct: 61  EAKRIAEEIERKRNINSRQVEKEEEKRAREKVVQKLEQDKIERKRFGGISSERSESLATK 120

Query: 175 ATTTGAGEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRN 234
           AT T AGEKD+ RSQNSLPATSVSKAVSMRECLRSLRHHHKD+ DKVR AYQTLFIYVRN
Sbjct: 121 ATATKAGEKDEPRSQNSLPATSVSKAVSMRECLRSLRHHHKDNFDKVRNAYQTLFIYVRN 180

Query: 235 VAKNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQKGGDFLYLARDKVDPHALVT 294
           VAKNPDEERFRKIRLSNPLFQERVGSL GGIEFLELCGF+K G+FLYL  DK+DP AL T
Sbjct: 181 VAKNPDEERFRKIRLSNPLFQERVGSLTGGIEFLELCGFRKEGEFLYLPHDKIDPEALNT 240

Query: 295 AGSLLNSALTNPFFGVL 299
           AGSLLNSALTNPFFGVL
Sbjct: 241 AGSLLNSALTNPFFGVL 257

[Close]
BLAST of Lsi11G007270 vs. NCBI nr
Match: gi|764529118|ref|XP_004290198.2| (PREDICTED: UBX domain-containing protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76
Identity = 171/317 (53.94%), Postives = 213/317 (67.19%), Query Frame = 1 

Query: 1   MAFLEVKQKLLSEIEALGFPRARVVRALHSTGNVSSEAAINWLIDHENDPDIDQMPLVAV 60
           MA   V +KLL E+E++GFP AR  RALH +GN S EA I+W+IDHENDPDIDQMPLV V
Sbjct: 33  MAVPRVNKKLLQELESMGFPTARATRALHYSGNASLEAGIDWIIDHENDPDIDQMPLVPV 92

Query: 61  DIDIESPEPFHITEEMRRKAKELRIEPMPVNSVPVKSMP-----------VKNYKKQKEL 120
           DIDIESPEPFHITE M+ KA+ELR +         K +            +++ K+  + 
Sbjct: 93  DIDIESPEPFHITEAMKIKAQELRDQTRKKRKEEEKKLEQQMEREREKERIRSGKEVVQA 152

Query: 121 QKKLKGND------SRQAAKEEEKRAREKVLQRLEQDMIERKRNRGMPSERSESLATKAT 180
           ++ L+ N+      SR + KEEEKRARE++  +LEQD +ER+   G+P   + S      
Sbjct: 153 KQILEDNERKRNIASRNSEKEEEKRARERIRWKLEQDKLERRVKLGLPPGHTASAKLSIP 212

Query: 181 TTGAGEKDKLRSQNSLPATSVSKAVSMRECLRSLRHHHKDDSDKVRIAYQTLFIYVRNVA 240
             G       + Q SLP  SV+K+  MRECLRSLR +HKDD  +VR A+QTL  YV NVA
Sbjct: 213 VRG-------QIQKSLPVRSVAKSEHMRECLRSLRRNHKDDDARVRRAFQTLMTYVGNVA 272

Query: 241 KNPDEERFRKIRLSNPLFQERVGSLKGGIEFLELCGFQK--GGDFLYLARDKVDPHALVT 299
           KNPD+E+FRKIRLSNP F +RVGSL GGIEFLELCGF++   G+FLYL RDKVD   L +
Sbjct: 273 KNPDQEKFRKIRLSNPSFLDRVGSLIGGIEFLELCGFERTEAGEFLYLPRDKVDMATLYS 332

The following BLAST results are available for this feature:
BLAST of Lsi11G007270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBXN6_BOVIN4.4e-0942.19UBX domain-containing protein 6 OS=Bos taurus GN=UBXN6 PE=2 SV=1[more]
UBXN6_MOUSE7.5e-0940.63UBX domain-containing protein 6 OS=Mus musculus GN=Ubxn6 PE=1 SV=1[more]
UBP14_SCHPO2.0e-0645.10Ubiquitin carboxyl-terminal hydrolase 14 OS=Schizosaccharomyces pombe (strain 97... [more]
UBXN6_HUMAN5.9e-0627.62UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1[more]
BLAST of Lsi11G007270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMA0_CUCSA7.5e-11776.85Uncharacterized protein OS=Cucumis sativus GN=Csa_2G049850 PE=4 SV=1[more]
A0A061DMF7_THECC3.2e-7555.81Ubiquitin-associated (UBA)/TS-N domain-containing protein, putative isoform 1 OS... [more]
A0A0B0NFS2_GOSAR3.3e-7254.19UBX domain-containing 6 OS=Gossypium arboreum GN=F383_09198 PE=4 SV=1[more]
A0A067L5H2_JATCU2.1e-7151.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01111 PE=4 SV=1[more]
A0A0D2ND72_GOSRA2.8e-7152.90Uncharacterized protein OS=Gossypium raimondii GN=B456_001G232900 PE=4 SV=1[more]
BLAST of Lsi11G007270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04850.14.7e-7048.24 ubiquitin-associated (UBA)/TS-N domain-containing protein[more]
AT5G48690.11.3e-5644.27 Ubiquitin-associated/translation elongation factor EF1B, N-terminal,... [more]
AT2G01650.19.7e-0745.24 plant UBX domain-containing protein 2[more]
BLAST of Lsi11G007270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069875|ref|XP_008452212.1|5.7e-11877.17PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo][more]
gi|449462689|ref|XP_004149073.1|1.1e-11676.85PREDICTED: UBX domain-containing protein 1-like [Cucumis sativus][more]
gi|700205977|gb|KGN61096.1|1.1e-11676.85hypothetical protein Csa_2G049850 [Cucumis sativus][more]
gi|659069883|ref|XP_008452246.1|1.1e-8773.93PREDICTED: calponin homology domain-containing protein DDB_G0272472-like isoform... [more]
gi|764529118|ref|XP_004290198.2|5.4e-7653.94PREDICTED: UBX domain-containing protein 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR015940UBA
IPR009060UBA-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044699 single-organism process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G007270.1Lsi11G007270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009060UBA-likeunknownSSF46934UBA-likecoord: 5..56
score: 2.7
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 11..43
score: 2.
IPR015940Ubiquitin-associated domainPROFILEPS50030UBAcoord: 5..46
score: 11
IPR018997PUB domainPFAMPF09409PUBcoord: 206..275
score: 4.8
IPR018997PUB domainSMARTSM00580PGNneucoord: 210..271
score: 1.4
IPR018997PUB domainunknownSSF143503PUG domain-likecoord: 190..294
score: 2.62
NoneNo IPR availableunknownCoilCoilcoord: 120..140
scor
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 5..50
score: 1.
NoneNo IPR availablePANTHERPTHR13020UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAININGcoord: 1..298
score: 2.0
NoneNo IPR availablePANTHERPTHR13020:SF34UBX DOMAIN-CONTAINING PROTEIN 4coord: 1..298
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G007270Csa2G049850Cucumber (Chinese Long) v2culsiB098
Lsi11G007270CSPI02G05630Wild cucumber (PI 183967)cpilsiB096
Lsi11G007270Cucsa.089720Cucumber (Gy14) v1cgylsiB100
Lsi11G007270CmaCh12G010010Cucurbita maxima (Rimu)cmalsiB155
Lsi11G007270CmaCh05G006700Cucurbita maxima (Rimu)cmalsiB709
Lsi11G007270CmoCh12G010110Cucurbita moschata (Rifu)cmolsiB144
Lsi11G007270CmoCh05G007030Cucurbita moschata (Rifu)cmolsiB703
Lsi11G007270Cla022856Watermelon (97103) v1lsiwmB117
Lsi11G007270MELO3C004086Melon (DHL92) v3.5.1lsimeB115
Lsi11G007270ClCG11G012540Watermelon (Charleston Gray)lsiwcgB083
Lsi11G007270MELO3C004086.2Melon (DHL92) v3.6.1lsimedB123
Lsi11G007270Cla97C11G218390Watermelon (97103) v2lsiwmbB078
Lsi11G007270Cp4.1LG07g08360Cucurbita pepo (Zucchini)cpelsiB656
Lsi11G007270Cp4.1LG11g05890Cucurbita pepo (Zucchini)cpelsiB070
Lsi11G007270CsGy2G005800Cucumber (Gy14) v2cgyblsiB089
Lsi11G007270Carg08358Silver-seed gourdcarlsiB052
Lsi11G007270CsaV3_2G007990Cucumber (Chinese Long) v3cuclsiB108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G007270Melon (DHL92) v3.6.1lsimedB113
Lsi11G007270Silver-seed gourdcarlsiB722
Lsi11G007270Cucumber (Chinese Long) v3cuclsiB008
Lsi11G007270Cucumber (Chinese Long) v3cuclsiB013
Lsi11G007270Watermelon (97103) v2lsiwmbB095
Lsi11G007270Watermelon (97103) v2lsiwmbB098
Lsi11G007270Wax gourdlsiwgoB109
Lsi11G007270Wax gourdlsiwgoB141
Lsi11G007270Wax gourdlsiwgoB145
Lsi11G007270Bottle gourd (USVL1VR-Ls)lsilsiB061
Lsi11G007270Cucumber (Gy14) v1cgylsiB104
Lsi11G007270Cucurbita maxima (Rimu)cmalsiB048
Lsi11G007270Cucurbita maxima (Rimu)cmalsiB050
Lsi11G007270Cucurbita maxima (Rimu)cmalsiB104
Lsi11G007270Cucurbita moschata (Rifu)cmolsiB033
Lsi11G007270Cucurbita moschata (Rifu)cmolsiB036
Lsi11G007270Cucurbita moschata (Rifu)cmolsiB092
Lsi11G007270Cucurbita moschata (Rifu)cmolsiB085
Lsi11G007270Cucurbita pepo (Zucchini)cpelsiB283
Lsi11G007270Cucurbita pepo (Zucchini)cpelsiB284
Lsi11G007270Wild cucumber (PI 183967)cpilsiB010
Lsi11G007270Wild cucumber (PI 183967)cpilsiB015
Lsi11G007270Cucumber (Chinese Long) v2culsiB009
Lsi11G007270Cucumber (Chinese Long) v2culsiB011
Lsi11G007270Cucumber (Chinese Long) v2culsiB016
Lsi11G007270Melon (DHL92) v3.5.1lsimeB106
Lsi11G007270Watermelon (Charleston Gray)lsiwcgB108
Lsi11G007270Watermelon (Charleston Gray)lsiwcgB112
Lsi11G007270Watermelon (97103) v1lsiwmB121
Lsi11G007270Watermelon (97103) v1lsiwmB124
Lsi11G007270Cucumber (Gy14) v2cgyblsiB008