Lsi11G006220 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTTATTTCCTCTCTCTTTCTCTGCTATAAATATCGCCGGTGGTTTGGACTCTGATCAGCAAACTGCCTACGACGCTTGTAGAATTGAGAATTTGCAACCGTGTTTGGAGATTTCATATTGGCCGTTGGATTATTGTCCGATAATCAGATGGGTGACGTGTCAGAACGTGAGAGGAAGATCCTTGTGGCCGTCGATGAGGGCGAGGAGAGCTTGTACGCTCTCTCTTGGTGTTTGAAGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCCCGGCCACCCCGTCCGATTTACACCGCCATGGATGGCACAGGTGCGTAATTAAATTTAATTTATATCTAATTTTTATTAATGCATCTAATAAAAATAAATTGGTTCTATATTTCTTTTGTTAAAATATTGGTCCATGTTTCCAAAACTTATATTAAAAATATTAATAAATAATGATGAAATGCATTTTTTGCACTTATATATTCTAAAACAAATGTTAATAGATAATAATTCTTTTTTTTTTAAAAAAAAAAATCAACAATAATTTAAAAAACTAAAATTAGACGTTTCAAAATATAAAGGATATAAAATTGAATCACTCCCCAGGTAGAGGAACTAAATAGCATTTTTAACCTTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTGGTTTGAGGGTAATTTTGGATTTTTTGGATTATTATTATTTTTTTAATTTTTTAATTTTTATTTTGCAGGGTATTTGTTTTCGGCAGATATAATGGCGACGATGGAGAGGTATAGTTATGACGTGGCAGAAGCTGTGCTGGAGAAAGCCAAGAGGCTATGCAAGGATCTAAACAATGTAAGTTATTTTTCTCTAATTTGTTTTTTAGTAGTTTTTAAAAACGGATCACATGCCAATATGACCGAGTCAATTTTATTTTTAAAACGTTCATTTTTAATATATGTTCAAAATTATCTTTCCATTTTATAGACGTAAAATCGATTTGATACAAATTTTTCTTCATACATTTTAAGAATGGTAGTGAATGTATCATCCCTGGAATTTAAAGGAAGCAAAATGTATCACATTTTAAAAGTACTATTTTAAAATTAAAATAAAATTTGTAGTGAAATTGTGAAATGCCAATTATAGCCTTGAGAGTTGAGATAGAGTTTTTAAGATATTTATACGATTTAAATTTTATGTTTTGATTTTATTATTTTTTTTTAAAAAAAGTGTAAATGACGAAAATAGGTTTGTGTTATAGGTGAAGGTGGAGAGGAGAGTGGAAAGTGGAGATGCAAGAGATGTGATATGTCAAATGGTGGAGAAATTGGGTGCTGACGTGTTGGTAATGGGTAGCCATGGCTATGGTCCAATCAAAAGGTTATCAATTGAATTCCTTTGCTCTTCATCTTTTCAAAAAAAAAAAAAATAAATAAATAAATACAATGATTAGGTGCAGTCTGTGCTCTCCTCTTCTTTATAAAAAATATTTAAAAAAAATACTAAAATTGTTATGTGGCCATTTTTGATTGGGTGCAACTTGAGTTGCATAGAAGATGGGTGCAACCGGGAAGCACCCAAGTTTTTTCTTTAAAAAAAAGTTTCATTTTAGTAACTAACATTAGTAAAAAGTAGAAAACAAGTGAAATAAGGGGAATTTTTTTTATTTCCCTCATTCACACTATAGATTTGTCTTTATAAAAGTTTATAGACATTAGTGGGTCCCACCTTATTTTTTTTTGAAAGGTATTGAAATTAGTGTTTATGTGTTGGAATCTATAAAATTATATTTGCCTTTGTCTATTAGTTTAAGCTTTTGGGTTAATCTGCTATTTAAGATGGTATCAGAATATGTAGTCCTGAGAAGTCATGTGTTTAAACCTTACAATGTTATTTCTTCATATTTTAAGTTTACAAGTGGGTGAGAGTGATGAATATATAATGTTATATTTACTTTTATATATTAGTTTAAGTTTTTGGGTCAATTGATAATTTAAGATTAATCATATAATTATAAAATGGAGTCTGAGGATTAACTTATCATATGTTAATAAAACTAAAATTAGGTCATTGTATCTTAAAAAACTAGTATTTATATCCATTTTTTTAACTTAGAATTTTTTTAGTGTGGACAACCAATTGTAAGTATTTCTAATCCATTTTTATAATCATTTAATTTTTAAAAAGTATACTTATAAACATTATTTTTATTTATAATTTTTATTAAAATTATATACTTAAAATCGAACCAAGTTTTGCAAAAACAAAAAAGTTGTTTCTTTTGATAACTATTTTTGCATTTGGAAGGTTTTTATGTTTTGTCATTCATTTTTTACCCATGTTTTAAGAAATTAAGCTAAGTTTTAAAAATTAATTTTTTTTTATATACTTTTTATTTGACTAGGAATTTGAGTTTTTTTTTCAAACAAAGGTGAACACTATTATTGAAAAATTGAGATCAAACAAATATAAACTTCAAAAGAAAAGAAAACTAAAAATAAAATTATTATCAATCTCGTCCGTAGTTTTTAAAATGTTGTTTTTATTTTTGAAATTTTACAAAAATTTAAATGTTTATTTAAAAAGGTAAAATCCATAATAAAAAAATGGAAAACAATAAACATAAATTTAAAGAAAAGAAAACTAAAGATGTGAAATTGTTAACGAAACTTAAAAAAAATTCAAGTTTTACATAATGTTAAAAAAATTTACATAAAGAATACTTGCCGCACATTGTTAAGTGGGATGTCCTAGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAGTAAATTACAAGTTTTGTCTCTTAATTTTGAAATTTGGATAAAAAATCTTTTAATAATAGATCCTTAACTTTTAATCTTATGTTAAATAAGTTTTTAACTTTAGAAAAGTCTACTATTTTGACATATTTGAAAACTTAAAATGTAAACAAATTGTAACTTTAGAAAAGTCTACTAAAAATTTTTAACTTTGTATTTAATAAGTTTTTGACATATTTGAAAACTTAAAATGTAAACGAATTGTTTTTTAGTTCAACAGATGGGTTACTAGAATTTGGACCTCCGATTTTAAAAAGTATAGTATAAAATTAACTTATTTATTATATTTAAATTTGCTTTTTTAAAAATATATGAGACTCTAAATTTTCAATTTGGTATCTAATAAATTTATAATTTTTATAGGTAAATAATTTATAAGATACAAAATTAAAAGTCAACTTAAAAGTTTAAACACTAAAATTTAAAATTTGTAATTTGGATGAAATTGAAAATATTAAAAGAAAATTTTCACAAATAGAAAAAATGCCAAACTATTTAAAAAAAATAGCAAAAAAAAAAAAACATGGATAAATATTGATAAACTTTTATCAGCATCTATCAGTGATAGACTTCTATCAGCATAGTGATAAACTTTTATTATTTTTATTACTGATAGACTCTAATAGACTTCTATCAGCGTCTATTATAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTCATTATTTTTTTATTTTTAAAAATTCTCTAATATTAAAGCTAAGCATTAATATGTTTTGACCTTCAAAATTTTGCAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGACTGTGAAATGCCCTGTTTTAATTGTAAAGAAGCCCAAAAACTCAGCATCAGCTTCTTCAAATTAATAAATTTATTTCCATTTCTCTCCTTTAATTTTCTTTCCCCTATCATTTTGTACAAAACTCTTTTCTTTTTAAATAATATATGGTGAAGTTAAACTATAAATTATCTGAGCAATGAAGTTTTACTTTGTTTTATATGTAGTTATTCGAATGGATAAGTAAATTGTGGATAATTAATGTAATTCTCGAGCAAGAGTTTAGAAGATTAATATTAATTATCATTTAATAATAGATAGA AAATTTTATTTCCTCTCTCTTTCTCTGCTATAAATATCGCCGGTGGTTTGGACTCTGATCAGCAAACTGCCTACGACGCTTGTAGAATTGAGAATTTGCAACCGTGTTTGGAGATTTCATATTGGCCGTTGGATTATTGTCCGATAATCAGATGGGTGACGTGTCAGAACGTGAGAGGAAGATCCTTGTGGCCGTCGATGAGGGCGAGGAGAGCTTGTACGCTCTCTCTTGGTGTTTGAAGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCCCGGCCACCCCGTCCGATTTACACCGCCATGGATGGCACAGGGTATTTGTTTTCGGCAGATATAATGGCGACGATGGAGAGGTATAGTTATGACGTGGCAGAAGCTGTGCTGGAGAAAGCCAAGAGGCTATGCAAGGATCTAAACAATGTGAAGGTGGAGAGGAGAGTGGAAAGTGGAGATGCAAGAGATGTGATATGTCAAATGGTGGAGAAATTGGGTGCTGACGTGTTGGTAATGGGTAGCCATGGCTATGGTCCAATCAAAAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGACTGTGAAATGCCCTGTTTTAATTGTAAAGAAGCCCAAAAACTCAGCATCAGCTTCTTCAAATTAATAAATTTATTTCCATTTCTCTCCTTTAATTTTCTTTCCCCTATCATTTTGTACAAAACTCTTTTCTTTTTAAATAATATATGGTGAAGTTAAACTATAAATTATCTGAGCAATGAAGTTTTACTTTGTTTTATATGTAGTTATTCGAATGGATAAGTAAATTGTGGATAATTAATGTAATTCTCGAGCAAGAGTTTAGAAGATTAATATTAATTATCATTTAATAATAGATAGA ATGGGTGACGTGTCAGAACGTGAGAGGAAGATCCTTGTGGCCGTCGATGAGGGCGAGGAGAGCTTGTACGCTCTCTCTTGGTGTTTGAAGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCCCGGCCACCCCGTCCGATTTACACCGCCATGGATGGCACAGGGTATTTGTTTTCGGCAGATATAATGGCGACGATGGAGAGGTATAGTTATGACGTGGCAGAAGCTGTGCTGGAGAAAGCCAAGAGGCTATGCAAGGATCTAAACAATGTGAAGGTGGAGAGGAGAGTGGAAAGTGGAGATGCAAGAGATGTGATATGTCAAATGGTGGAGAAATTGGGTGCTGACGTGTTGGTAATGGGTAGCCATGGCTATGGTCCAATCAAAAGGGCATTTATTGGGAGTGTGAGCAACCATTGTGCAAAGACTGTGAAATGCCCTGTTTTAATTGTAAAGAAGCCCAAAAACTCAGCATCAGCTTCTTCAAATTAA MGDVSERERKILVAVDEGEESLYALSWCLKNVISQNSKDTLILLYARPPRPIYTAMDGTGYLFSADIMATMERYSYDVAEAVLEKAKRLCKDLNNVKVERRVESGDARDVICQMVEKLGADVLVMGSHGYGPIKRAFIGSVSNHCAKTVKCPVLIVKKPKNSASASSN
BLAST of Lsi11G006220 vs. Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1
BLAST of Lsi11G006220 vs. Swiss-Prot
Match: PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana GN=PHOS32 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 1
BLAST of Lsi11G006220 vs. Swiss-Prot
Match: PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana GN=PHOS34 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09 Identity = 49/164 (29.88%), Postives = 75/164 (45.73%), Query Frame = 1
BLAST of Lsi11G006220 vs. Swiss-Prot
Match: Y531_METJA (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0531 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.1e-07 Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 1
BLAST of Lsi11G006220 vs. Swiss-Prot
Match: Y577_METJA (Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0577 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06 Identity = 46/160 (28.75%), Postives = 77/160 (48.12%), Query Frame = 1
BLAST of Lsi11G006220 vs. TrEMBL
Match: A0A0A0LIZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033930 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 5.6e-77 Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1
BLAST of Lsi11G006220 vs. TrEMBL
Match: M5WK93_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012501mg PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.4e-67 Identity = 127/164 (77.44%), Postives = 148/164 (90.24%), Query Frame = 1
BLAST of Lsi11G006220 vs. TrEMBL
Match: A0A061FAY2_THECC (USP-like protein isoform 1 OS=Theobroma cacao GN=TCM_026752 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67 Identity = 130/167 (77.84%), Postives = 149/167 (89.22%), Query Frame = 1
BLAST of Lsi11G006220 vs. TrEMBL
Match: W9RDB2_9ROSA (Universal stress protein A-like protein OS=Morus notabilis GN=L484_004112 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 5.3e-67 Identity = 129/170 (75.88%), Postives = 148/170 (87.06%), Query Frame = 1
BLAST of Lsi11G006220 vs. TrEMBL
Match: A0A061F3N3_THECC (USP-like protein isoform 3 OS=Theobroma cacao GN=TCM_026752 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 5.8e-66 Identity = 128/166 (77.11%), Postives = 148/166 (89.16%), Query Frame = 1
BLAST of Lsi11G006220 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42 Identity = 78/153 (50.98%), Postives = 116/153 (75.82%), Query Frame = 1
BLAST of Lsi11G006220 vs. TAIR10
Match: AT2G47710.1 (AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 105.5 bits (262), Expect = 3.2e-23 Identity = 58/153 (37.91%), Postives = 90/153 (58.82%), Query Frame = 1
BLAST of Lsi11G006220 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 105.1 bits (261), Expect = 4.2e-23 Identity = 66/172 (38.37%), Postives = 95/172 (55.23%), Query Frame = 1
BLAST of Lsi11G006220 vs. TAIR10
Match: AT3G58450.1 (AT3G58450.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20 Identity = 58/174 (33.33%), Postives = 101/174 (58.05%), Query Frame = 1
BLAST of Lsi11G006220 vs. TAIR10
Match: AT1G68300.1 (AT1G68300.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 92.4 bits (228), Expect = 2.8e-19 Identity = 47/149 (31.54%), Postives = 84/149 (56.38%), Query Frame = 1
BLAST of Lsi11G006220 vs. NCBI nr
Match: gi|449454030|ref|XP_004144759.1| (PREDICTED: universal stress protein A-like protein isoform X2 [Cucumis sativus]) HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79 Identity = 150/168 (89.29%), Postives = 161/168 (95.83%), Query Frame = 1
BLAST of Lsi11G006220 vs. NCBI nr
Match: gi|449454028|ref|XP_004144758.1| (PREDICTED: universal stress protein A-like protein isoform X1 [Cucumis sativus]) HSP 1 Score: 295.0 bits (754), Expect = 8.0e-77 Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1
BLAST of Lsi11G006220 vs. NCBI nr
Match: gi|1009116683|ref|XP_015874908.1| (PREDICTED: universal stress protein A-like protein [Ziziphus jujuba]) HSP 1 Score: 265.8 bits (678), Expect = 5.2e-68 Identity = 125/163 (76.69%), Postives = 146/163 (89.57%), Query Frame = 1
BLAST of Lsi11G006220 vs. NCBI nr
Match: gi|595830234|ref|XP_007206031.1| (hypothetical protein PRUPE_ppa012501mg [Prunus persica]) HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67 Identity = 127/164 (77.44%), Postives = 148/164 (90.24%), Query Frame = 1
BLAST of Lsi11G006220 vs. NCBI nr
Match: gi|590644622|ref|XP_007031132.1| (USP-like protein isoform 1 [Theobroma cacao]) HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67 Identity = 130/167 (77.84%), Postives = 149/167 (89.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |