Lsi11G005470 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G005470
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr11 : 5684409 .. 5693473 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTCAAATGGGTATTTCAAAAACTGAGCTCCCAGCTTCCCTCTTGGGCCGCTTCTCTAATCTCCCCTTTCGGAAACCAATTCCATCAAAACCCATTTGCAGAACCCTCCTCAACATTCGTCCTCAAACATGTAGACCCAAGCTTCCTTCTATCCGTTTGTGGAAGAGAAGGGCATCTCCATTTGGGCTCTTCCCTTCATGCCTCCATTACCAAGAGCTTCGAGCTCTCCAACCATGATAATGGTGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCCGATGCAGTTAAGGTGTTTGATGAAATGCTTACAAGAGATACCATTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTTTGTGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGACAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCTTGGAGTTCTGTTGCATTATTAAAATGGTGCATGGTTTTGCGTTTTTGAGTGGGTATGATCAAGAAATTACTGTGGGAAATGCTTTGATTAGTTCGTATTTTAAATGTGGATGTGTTGATTTGGGGATGCAAGTTTTCTACGAGATGGGGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCGTCATGAGCACAGCCTGAAGCTGTTTAGGGAGATGATGAGTTGTGGGTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGCTGGGAATTCAGTCAGATTTGTGCATTGGAAGTGCTCTGATGGATATGTACTCAAAGTCTGGAAGAATTGGAGATGCTTGGAAGATTTTCGAGTCGGCTGAGGAATTTGATATGGTTTCATTAACTGTTATACTTGCAGGGTTCACACACAATGGATGTGAGGAAGAAGCCATCCAGATCTTTCTGAAAATGTTGAAGATGGGGATCAAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGGGTGTTTGGTGCTGATACATCTTTGGGACTGGGTCAACAAGTTCACTCGTTTGTTGTCAAGAAGAACTTTAGTTGCAATCCTTTTGTGAGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGATGAGTCAGTGAAGGTCTTTGATAGGATGCAAGAGAGGAACTCGGTGACATGGAACTCCATGATTGCAGCATTTGCCCGACATGGAGATGGCTTGAAAGCTCTACAACTTTATGAGAATATGAAACTGGAAGGTGCAAAGCCGACCGATATCACGTTTCTATCGTTACTCCATGCTTGTAGCCATGTCGGGTTACTAAAAAAGGGAATGGAATTCCTCGAATCGATGACAAAAGATCACGGGATGAATCCAAGGAGTGAACACTATGCCTGTGTTGTTGACATGTTGGGTAGGGCAGGACTGCTGTCTGAAGCTAGAAACTTCATTGAGAAACTGCCTGAACAGCCAGGTTTACATGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCTGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCGGAAACTCCACATAGTTCGGTCCCATATGTTTTGTTAGCCAACATATATTCTTCTGAAGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGGTGGGAATGGCCAAAGAAACTGGTATCAGCTGGATTGAGATTGACAAGAAAGTCCATAGTTTTACCGTTGGAGACAAAATGCATCCACAAGCTGAGATCATTTATGGAGTTTTGATGGAGCTGTTTGTACTCATGGTAGATGAAGGATATATGCCAGATAAGAAGTTCATCCTCTACTACTTGGATGATGACAGGAGGGATCCGATCGATAACGGTCTTGCTAACCGTCAAAATGTCAAAGAAACCGACGTTGTTTGGGAGCTGTTCTGAAAAATAGCCTTCTAAGTACAATCAATGGAGTATAAAAATATGAGCTTCCAACTCCAAAGAAAAAAGTACATGTCAATTACCGTCTAATTATACTCACTTTAGCAAACAATTTTATATTTTTTAGAATAGAACATATTTGTATTACTACTTTCTAAACTTTCTAAAAGTTTTTGTAGTTTTAGAATAGAAGTTTGGTAAAAAATACTTATTCATGATTATTTTAGTTGAATTATATCTAAGTTGAATCCGTAACTCTAACTTTAGATTAAGAAGATATATGTCTAGGTTGTCTCCAATAGTATGCTTACACTTGAATGTTCATATTTCTTTTCCTTCTTTTAGACCGTGACTCCGTAAAAATTTAAAAAACTTAAGAAAATTGTTTTAAATGACAAATAATGAAAATATTTACAAATATAGCAAAAATAACATATTAGGATGAGTAAATTTTTTGTCATTTTTTGCTATATTTGTAAATATTTGGGCAAAATACACTTTTGGTCCCTAAGGTTTGGAATTGTTGTCTATTTGGTCCCTGAAGTTTAAAAACGAACACTTTAGTCTCTGAGGTTTGAAAAATACTTCTAAATGGTCCCTGAGTTAATTTGACCGTTAGTTGACTAACGGAAAAGTGATGTGGCACATTTAATTAACAATTTTTATTAATTTTATATTATTTTTTTATTAGGTGGATATTTTCTTTTTCTTTTTTCTTCTCTCTCCTCCCTTCTCCTTTCTTCCTCCCTCCACCCCTCCCTTGAAACTTTCCTCTTTGTTTATACACTAATCACACCCATCACTAACAATTTTTATTAATTTTATATTATTTTTTAAAGATTTTTTTTTATTGAGTTTGAGAAAAGAAGATTTTTCTATATGCCTTATTTTATTTGCTTTTGGTCTGCTTGCTTCCTTCTTGTTTTTCTTGCGATTGGAGATTTGAAAAATTAGGGTTTTGTTTCACAATGTTTTTCCTCTCTTCCTTTATGGGTTGATGGATGGATCGATTAAAGCTGAAGGAGTGAATTTTTTTTGTTTTATTTTTTATTTCAAAAATTAGAGTTCATCCTTCTAGATTTTTGTTTTTCTTATTTTTTTTTTGTAAAGAAGGTGAAGGGACGAGAGAAAGGAAAAGGGAAAGAGAGAAAAAGAAAAAAGAAAAATATATCTAATTAAAAAAAATAGAAAAATTAGTAAAAAAAATGCCACCTCATTTAAAGTTTGTAACTCAACTTGCCATATTACTTCTCCGTTACTAACGGTCAAATTAACTCAAGGATCATTTAGAAGTATTTTTCAAATCTCAGGGACTAAAGTGTTCGTTTTTAAACTTCAGGACCAAATAGACAACAACCCCAAACTTCATGGACCAAAAGTGCATTTTGCCCTAAATATTTTTATTATTTTATTATTTATGAAAAAAACTCCTAATAATAAATAAATTTCAAATTTAGTTCTTGAACGGTGAGTATTTAATCCATCAAGTTTCAAATTTACAAATTTATTAAAATTTACTGACCTACTCAAAGCTTGGTTCCAACAGATTTTAAATTCAATTTTTTATATCTAAGATCAATTAAAATTTAAAATTTAAATATTTGTTGAATTTATTAGATTAAAAGAAATTTATGGTTTAGGGAATGGAAGGATATGGAAATTGTTAATATAATGTGAGGCATTTAGGAACAAAATCAACCTTCGGCGAAGGCCAATAATGGAGGCGCTGTGTTTCTCCACTACCATTCTTCCATTTCGAAAAACCGTTGGCTCTTTCAATGACAGTTCCAATTTTCCCTCCAATTCAAAATCTTCCATTCTCTTCCCTTCCTCATTAAGCTCTCGATTCGCAGCGATTTGCAGGCAAAGAATTGAAGGAGAAGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCAACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTACTGTTTCTTTCTTCCCTTTGCCGCTTTGATTTCTCTCGTTGCTAAGCGAACTTAATTGTACTATCTAGATTTCTTGTTGGAGATACATTTGAGTTTTCGGATTATGTTTGGGGAATGAAGAACTGATTAGGCTACTTGGGTTGATTTTTTGAGTTTTTGTTTTCTGTGTGGATTTTCAATTCGACTTCTGATTTGTGGCCGTATAGGTGAAGCAATTTCATCCGGACGTGAATAGAAATGAGAATGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGGTAGCTATTAGCTATGCATTTGTAGAAACATGAAGAAAGTTGTGTTGTGTCAATGCTTAATGTTGTTTCTTTTGTAGGATTAACATTATGGTAATCATCAATTATGTTGATTTTTATTTGATTGTTATCTCCGCGTGCTTAACATTGTAGAATTCAAAACTATTTTCTGTTGTTTCTGTGCTAATACTAGTAGGTAAGACAGTTTAACCTGCTGACAGATTTATAAGGAGATTGTTGATCAGCTTTCTTTATATCCTCAAACAACTTCTGGGTTCTTATTGATATGCTTTGAATGATTCGACTCGCAGTCCGTAATTAGTGAGAAAATGTGTAGAAATTATAGAAAGATAGTGTTTTAGAGAGAGAAATTAGTGAGAGGAAGTGCATAGGAGTAATCAAGGAAAAAAGTGTCATTAAATATTATTTTGGCTTTTACTCTCAACTTTAGTTCACTTTTAACTCATAATTTTCATTATAGTCTTTATACTTTCAACTTTTATTCGTTGTTTTGAAAGTTAACAAAAGTCAAAAGTACTTGTTTGATTTTTAGTTTTTCTCTTTCTTATAACTTTGACTTCCAGTTCCACCATGAGAGACGGTAACAAGGCTGGTACTATTTGTGATTTGATGGCCAACTTGTTATGTCATCTATGTTGTAGTCAATAGTGAAACTCAACAATGACTATGCTCCGTAAAATATGCAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAGAGGTATCGTAGTACTTTTGATGTTGATCTCAGGGTGTATAGAACTTCTTAACTTCTTGCAACATTCATCATAGAACGAATTGTGTAATGTCCATATGCTTGGAAGGTTCAGGAGAAATTTTATCTATAAATAAACAATGCTATGTAATATATAGCAATTTATTACTTTTTACTCAAATTCTACCATATAATAGGGGTTAAATGTCCATTGTCGATAATTTGAGTCTTTGACATTCAATGTGATTTTATGATTTCAAGTTTCAGTTCCTTCTTCATTTTTATCATTTTAATTGGTATATCTATTATTCATTTTTTATGAAAATTTTACTATTGAACATATGAAGTCAGGGAATGTTTAGATCCTTTTGAGAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGGTACAATCTTTGCACCATCTTATGAATGTTACAATGTTGTAATACAATAATGATGTCCTTCTCACTGACTCCCCTCTCACATGTGTTGTCATAATAATATGCAGCCTGCCCATATTCTTGTGTAGATAGAGCTCCCCATGTTTTCACTTTTGCTTCTTCCACTGGGACAGCTCGGGCCACGTCTCAAGGTTCGTTCTCACAACTATAATTTTAAATTTAGATGCATAACCAAAAGACTTATGTGATTTCTCAATTTATTACATGTGAGTAGGACATAGTGAGGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTACGTAACACCTTTGCAAAGGATCATTCTGGAAGAGCTACTTGACAGGTAGAACAATATTCCAACTTAGATATATGTTTGGAATATAGAAAATATAAGTTGATTCATGTTTGAAAACAACCACTTTTTTATCTATACGAAGAAAGATCATAGTTTTGTAACTGTAGTTTATCTTTGTTCGTGTAGTGCCTTGGATGTGCCTTATGATAATTCTGCAGAGGCAGATTTACTATATTCTCTTATAATGAAATCAAAATTCGAGAATAATCGATACAAAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGAAATTTGATATACAGTCTCTTGTTGGGATGAAGCCAACGCAGTTGACGAAATACATCAACATCATGGTTTGCCTCTACAAGCGAAGAAGTCAGAAATATCCTCGATATTTGTGTTGTATACTCTATCTTGAGCATCAAAGTTAATGCGAGAATGCTACATTATAGATGAAAAAGGTGAATTCTATACGTTCAACTATTGAAGTACAGCCTCTAGATTTTCACTTATTAATTTAGTGTAAAATCAATTTATATTCCTTAAGCTTTTAAGGTTGTATCAATTAAAATTCTAAATTAATAATTATATCTATTTAAACCATAAACTTTTATGAGTACATCAATTTAGACCATTTCTTAGAATTTCGTTTTAAACCATTAATCCATAAATTTTACACATTTATAAGACTTCTTTAAATATAAGGATTAGTGAAAAAAATACTAGAATCAAATTAGGATAAGTTTTTCATCTATTTGCATTAATTTTTCTCTATTTATTTAGAAGGAATTACGTAATAGTTTTTCTTGTTGCTTGAGTGAGATTTTTAGAGAATAATAATTTTATTTGAGCTGATTTTTACTAAAATCAAGTTAAAATAGCTATAGATAACTAACCAAAGACATACTTTGATTCACTCACGAAAGTTGATGGTTAAATTGATACAATTATCAAACTCCCAATGTATACAAAGGTAAAGATATTTCTCTTCCAATGATATTTGCTCAAATATTTAATACAAAGTTTGATATTTCTCTCCGAGTTTGAATTTGTTAGCCTCGTCTGCATATGATTCACTTATCAATGTTATAAAGGCTTTTCTGATGAAAATTTGTTGAGATATCTGTAGCAGTAAACCGGTAGCCTATGCTTGTAGCTTGATTATCTAGTTAACTCAACTATTTTTTTATTTTTTATTATTACCATTTTTTATTATTTTATTATTATTATTATTATTATTATTATTGTAAAGAACAGATCTATCAAGAAAATTGACTATTTGGTTTCTGGAACCAGCGATTAGAGCTAAGGTAACTTATTAAAGACAGAATAGATTGCATTTGGAGTTCATAATATACAATACAAGGACCCATGAATTGTAAAAATATCAAGGAAATTTGCTCTGCTTATTTTGAAATTGCCTTCATGAATCGGGTTAATGAAGAGAGAACTCCAGCTGCTTTGTCCAAAAATGACGGGTCCTGGTCTGACTCTGCTACATTTCCAAATATTATCTGCACAAGATACTTAGACTTAACATTAGTGATCAAACTAATCTCTTAGAACCACTATTAGATTGAAATTGTGAAAGCTCCACAATTAAGTTATCTAAACAATCTATTTATTTACTTCTGATCATATAATGTGAGGTAAAGTAGGAGACAGATTAGTAGGATCATGTAATGAATGATATATGCTATTTTCTCAGGTAACTGACCTCGAGGTCTCCAGCATCTGGACGGCTTATTAATTCTTTGGCAAGCAAATATCTGCCAGGCCTATCTTTATCATCATAGAACACTTTCCATAACCTGGTCAGAGATTGCAAAGATGTCAGTCACATCTTGAAAAAAAAACCCAAAAACGGAAGAAGAAGAAGAACGTGGCTGGAGAAATTTCAAGCATAGGTATTTGAGGTAGGATGCTACATTTAGTGGCCCGGTCTTTGAGCTTGATTATTATTTCAAATTAATGGTTCCCTTACTTGCATGTAAGATACAGCATAGTATTTGATTATATTCTTAAATTTGTTCAGGTCATACAACCAAAAAGTAGTCTGGACGATCTGGGTTGTTCCTATATAACTGAAACAGGGTTTTCTGCATTCTGTCTAGAGCCTTGAGAAGGCCAAAGTGAACTCAGCAGTCAAATAGAGGAAACAGTCAACTTCAGCACAGTGAGTACATGGTTTAAAGAATCTCACAAGATGTTAAAATCTCCTTACCCAGGATAAGCTCTAAATACAGCACCAGATGGCAAAGGCCTCATGGAGTAGACTGTTGTAAACGTGCTGTACGAAAAAGAACAAAATGGAGGTTGAGTAACACAAATCCTTTCTTACCTGAACTTAAATGACCAGTTACAAAGTTCAAAGCCTCTTATAAATGAGACATTTTTCTCCTTAACAACTGTTATGTATGAGGTTCGACATTTACTTCATATTAGAATACTTTCTTGAGCTATGATGATCATTTTTTGTAAACAACTGCTTCCTAAGTAAAATAACCTGGACTTGTATTTTTCATAATGCTGATGTCTACTCAGACCTAGATATAGATGAAATGTATTCTAGATATAGTGAGAGTTATGAAATTTACCTTAAAAAGTATCTTCTCAATTTTCGAACATTAAATCCAACCCCTACATCTTCGCTGATGAGACGAGGATTCCACATAACAAGAGGCCTTGGCTGCCATCAACAATGTAGAAAAGTAAATAGGAAGAAGGAACCAGTTCATTTGATTCAGTGTACAAGTGAAAACTGTCAAGGTCCAAATATATGTAAATGATCTGATGATGTATAACACTTTCAGACAGAATAGTCTTCCTTTTCTTATTATGTATATGTTAACTCAATGAAAGATAACCTAACACATATTAATTCGAACTTATGTGGTTTCATCATTATTGCAGATTTCTCCAATGTTGGCCATCGAGTACCAATCAAGGAGAAAAATTTGGAAGCAACCATTTCAACAGCAAATGGAACAATTCAGATTTTTTACCGGATCATCTCTGAGGGCAGCTGCAATTTTCTCTACATTTTCCAACATTTGGTAATCGGGAACAACCATAACAACTATCTCATCTGCACTATCTACAGGTTTTCGGTCGCTTAAGCTGGAATGACGATCATATGTCACTAAGTTGTAATTGTATTCAGGGTGAAAGAAAGCATATAGAATCACATTGTAGAAACCCAACTTTAGCTTAACTTTTTAGAGTACACAATTTAT

mRNA sequence

ATGAAACTCAAATGGGTATTTCAAAAACTGAGCTCCCAGCTTCCCTCTTGGGCCGCTTCTCTAATCTCCCCTTTCGGAAACCAATTCCATCAAAACCCATTTGCAGAACCCTCCTCAACATTCGTCCTCAAACATGTAGACCCAAGCTTCCTTCTATCCGTTTGTGGAAGAGAAGGGCATCTCCATTTGGGCTCTTCCCTTCATGCCTCCATTACCAAGAGCTTCGAGCTCTCCAACCATGATAATGGTGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCCGATGCAGTTAAGGTGTTTGATGAAATGCTTACAAGAGATACCATTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTTTGTGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGACAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCTTGGAGTTCTGTTGCATTATTAAAATGGTGCATGGTTTTGCGTTTTTGAGTGGGTATGATCAAGAAATTACTGTGGGAAATGCTTTGATTAGTTCGTATTTTAAATGTGGATGTGTTGATTTGGGGATGCAAGTTTTCTACGAGATGGGGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCGTCATGAGCACAGCCTGAAGCTGTTTAGGGAGATGATGAGTTGTGGGTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGCTGGGAATTCAGTCAGATTTGTGCATTGGAAGTGCTCTGATGGATATGTACTCAAAGTCTGGAAGAATTGGAGATGCTTGGAAGATTTTCGAGTCGGCTGAGGAATTTGATATGGTTTCATTAACTGTTATACTTGCAGGGTTCACACACAATGGATGTGAGGAAGAAGCCATCCAGATCTTTCTGAAAATGTTGAAGATGGGGATCAAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGGGTGTTTGGTGCTGATACATCTTTGGGACTGGGTCAACAAGTTCACTCGTTTGTTGTCAAGAAGAACTTTAGTTGCAATCCTTTTGTGAGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGATGAGTCAGTGAAGGTCTTTGATAGGATGCAAGAGAGGAACTCGGTGACATGGAACTCCATGATTGCAGCATTTGCCCGACATGGAGATGGCTTGAAAGCTCTACAACTTTATGAGAATATGAAACTGGAAGGTGCAAAGCCGACCGATATCACGTTTCTATCGTTACTCCATGCTTGTAGCCATGTCGGGTTACTAAAAAAGGGAATGGAATTCCTCGAATCGATGACAAAAGATCACGGGATGAATCCAAGGAGTGAACACTATGCCTGTGTTGTTGACATGTTGGGTAGGGCAGGACTGCTGTCTGAAGCTAGAAACTTCATTGAGAAACTGCCTGAACAGCCAGGTTTACATGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCTGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCGGAAACTCCACATAGTTCGGTCCCATATGTTTTGTTAGCCAACATATATTCTTCTGAAGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGGTGGGAATGGCCAAAGAAACTGGTATCAGCTGGATTGAGATTGACAAGAAAGTCCATAGTTTTACCGTTGGAGACAAAATGCATCCACAAGCTGAGATCATTTATGGAGTTTTGATGGAGCTGTTTGTACTCATGGTAGATGAAGGATATATGCCAGATAAGAAGTTCATCCTCTACTACTTGGATGATGACAGGAGGGATCCGATCGATAACGCGATTTGCAGGCAAAGAATTGAAGGAGAAGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCAACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTGAAGCAATTTCATCCGGACGTGAATAGAAATGAGAATGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAGAGGGAATGTTTAGATCCTTTTGAGAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGCCTGCCCATATTCTTGTGTAGATAGAGCTCCCCATGTTTTCACTTTTGCTTCTTCCACTGGGACAGCTCGGGCCACGTCTCAAGGACATAGTGAGGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTACGTAACACCTTTGCAAAGGATCATTCTGGAAGAGCTACTTGACAGTGCCTTGGATGTGCCTTATGATAATTCTGCAGAGGCAGATTTACTATATTCTCTTATAATGAAATCAAAATTCGAGAATAATCGATACAAAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGAAATTTGATATACAGTCTCTTGTTGGGATGAAGCCAACGCAGTTGACGAAATACATCAACATCATGGTTTGCCTCTACAAGCGAAGAAGTCAGAAATATCCTCGATATTTGTGTTGTATACTCTATCTTGAGCATCAAAGTTAATGCGAGAATGCTACATTATAGATGAAAAAGGTAACTGACCTCGAGGTCTCCAGCATCTGGACGGCTTATTAATTCTTTGGCAAGCAAATATCTGCCAGGCCTATCTTTATCATCATAGAACACTTTCCATAACCTGGTCAGAGATTGCAAAGATGTCAGTCACATCTTGAAAAAAAAACCCAAAAACGGAAGAAGAAGAAGAACGTGGCTGGAGAAATTTCAAGCATAGGTATTTGAGGTCATACAACCAAAAAGTAGTCTGGACGATCTGGGTTGTTCCTATATAACTGAAACAGGGTTTTCTGCATTCTGTCTAGAGCCTTGAGAAGGCCAAAGTGAACTCAGCAGTCAAATAGAGGAAACAGTCAACTTCAGCACAGTGAGTACATGGTTTAAAGAATCTCACAAGATGTTAAAATCTCCTTACCCAGGATAAGCTCTAAATACAGCACCAGATGGCAAAGGCCTCATGGAGTAGACTGTTGTAAACGTGCTGTACGAAAAAGAACAAAATGGAGATTTCTCCAATGTTGGCCATCGAGTACCAATCAAGGAGAAAAATTTGGAAGCAACCATTTCAACAGCAAATGGAACAATTCAGATTTTTTACCGGATCATCTCTGAGGGCAGCTGCAATTTTCTCTACATTTTCCAACATTTGGTAATCGGGAACAACCATAACAACTATCTCATCTGCACTATCTACAGGTTTTCGGTCGCTTAAGCTGGAATGACGATCATATGTCACTAAGTTGTAATTGTATTCAGGGTGAAAGAAAGCATATAGAATCACATTGTAGAAACCCAACTTTAGCTTAACTTTTTAGAGTACACAATTTAT

Coding sequence (CDS)

ATGAAACTCAAATGGGTATTTCAAAAACTGAGCTCCCAGCTTCCCTCTTGGGCCGCTTCTCTAATCTCCCCTTTCGGAAACCAATTCCATCAAAACCCATTTGCAGAACCCTCCTCAACATTCGTCCTCAAACATGTAGACCCAAGCTTCCTTCTATCCGTTTGTGGAAGAGAAGGGCATCTCCATTTGGGCTCTTCCCTTCATGCCTCCATTACCAAGAGCTTCGAGCTCTCCAACCATGATAATGGTGTCGTCATAATGAACTCTCTCATCTCCATGTACGAGAGGTGTGGTAAATTGCCCGATGCAGTTAAGGTGTTTGATGAAATGCTTACAAGAGATACCATTTCGTGGAACGCATTGATTGGTGGGTTTATGAGAAATGGGGAGTTTTGTGCTGGTTTTAGCTATTTTAAGGCTATGTGTTTAGTTGGTGATTGTAAATTTGACAAAGCTACTTTGACGACGATTTTATCTGCTTGTGATGGCTTGGAGTTCTGTTGCATTATTAAAATGGTGCATGGTTTTGCGTTTTTGAGTGGGTATGATCAAGAAATTACTGTGGGAAATGCTTTGATTAGTTCGTATTTTAAATGTGGATGTGTTGATTTGGGGATGCAAGTTTTCTACGAGATGGGGGAGAGAAATGTGATTACTTGGACGGCTGTGATCTCTGGTTTGGCTCAAAATGGGCGTCATGAGCACAGCCTGAAGCTGTTTAGGGAGATGATGAGTTGTGGGTCTGTGGAGCCAAATTCTTTAACTTATTTGAGTTTACTCACTGCTTGTTCTGGTTTGGAGGCATTAGAGGAAGGATGTCAAATTCATGGTCTTATTTTGAAGCTGGGAATTCAGTCAGATTTGTGCATTGGAAGTGCTCTGATGGATATGTACTCAAAGTCTGGAAGAATTGGAGATGCTTGGAAGATTTTCGAGTCGGCTGAGGAATTTGATATGGTTTCATTAACTGTTATACTTGCAGGGTTCACACACAATGGATGTGAGGAAGAAGCCATCCAGATCTTTCTGAAAATGTTGAAGATGGGGATCAAGATTGACGAAAATGTTGTTTCAGCTGTTCTTGGGGTGTTTGGTGCTGATACATCTTTGGGACTGGGTCAACAAGTTCACTCGTTTGTTGTCAAGAAGAACTTTAGTTGCAATCCTTTTGTGAGCAATGGGCTTATAAACATGTACTCCAAGTGTGGAGCATTGGATGAGTCAGTGAAGGTCTTTGATAGGATGCAAGAGAGGAACTCGGTGACATGGAACTCCATGATTGCAGCATTTGCCCGACATGGAGATGGCTTGAAAGCTCTACAACTTTATGAGAATATGAAACTGGAAGGTGCAAAGCCGACCGATATCACGTTTCTATCGTTACTCCATGCTTGTAGCCATGTCGGGTTACTAAAAAAGGGAATGGAATTCCTCGAATCGATGACAAAAGATCACGGGATGAATCCAAGGAGTGAACACTATGCCTGTGTTGTTGACATGTTGGGTAGGGCAGGACTGCTGTCTGAAGCTAGAAACTTCATTGAGAAACTGCCTGAACAGCCAGGTTTACATGTGTGGCAGGCGTTGCTCGGCGCCTGCAGCCTCTACGGTGATTCTGAAATGGGGAAATATGCAGCCGAACATCTGTTTTCGGAAACTCCACATAGTTCGGTCCCATATGTTTTGTTAGCCAACATATATTCTTCTGAAGGGAATTGGAAGGAAAGAGCAAGGACAATTAGGAAGATGAAGGAGGTGGGAATGGCCAAAGAAACTGGTATCAGCTGGATTGAGATTGACAAGAAAGTCCATAGTTTTACCGTTGGAGACAAAATGCATCCACAAGCTGAGATCATTTATGGAGTTTTGATGGAGCTGTTTGTACTCATGGTAGATGAAGGATATATGCCAGATAAGAAGTTCATCCTCTACTACTTGGATGATGACAGGAGGGATCCGATCGATAACGCGATTTGCAGGCAAAGAATTGAAGGAGAAGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCGTCGACCCAACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTGAAGCAATTTCATCCGGACGTGAATAGAAATGAGAATGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGATGTTATCCAGTTACAGCCGAACAGAGTTCATTGAGAGGGAATGTTTAGATCCTTTTGAGAACCCAGAATGTGAAGCATTTGATGTCTTTGTTAATGAGTTTCTTTGTGTTGGAAAAGCCTGCCCATATTCTTGTGTAGATAGAGCTCCCCATGTTTTCACTTTTGCTTCTTCCACTGGGACAGCTCGGGCCACGTCTCAAGGACATAGTGAGGATTATCAGGTTCAGATTGCAGTTGGCCAATGCCCCAGAAGCTGTATACATTACGTAACACCTTTGCAAAGGATCATTCTGGAAGAGCTACTTGACAGTGCCTTGGATGTGCCTTATGATAATTCTGCAGAGGCAGATTTACTATATTCTCTTATAATGAAATCAAAATTCGAGAATAATCGATACAAAAAGCCAAAGAGGGAGCCAAAGGCTTCAACAGAACGAGTGGATTGGTATTGA

Protein sequence

MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGHLHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDNAICRQRIEGEDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVKQFHPDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERVDWY
BLAST of Lsi11G005470 vs. Swiss-Prot
Match: PP215_ARATH (Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2)

HSP 1 Score: 771.9 bits (1992), Expect = 7.3e-222
Identity = 396/661 (59.91%), Postives = 477/661 (72.16%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           M  +WV QKL+S LPS  ++++SP      Q+P  + S TF+L HVD S LLS+CGREG 
Sbjct: 1   MNSRWVIQKLTSHLPSCLSTVLSPSKILIRQSPNYQVS-TFLLNHVDMSLLLSICGREGW 60

Query: 61  L-HLGSSLHASITKSFELSN------HDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTR 120
             HLG  LHASI K+ E         H N +V+ NSL+S+Y +CGKL DA+K+FDEM  R
Sbjct: 61  FPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR 120

Query: 121 DTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMV 180
           D IS N +  GF+RN E  +GF   K M  +G   FD ATLT +LS CD  EFC + KM+
Sbjct: 121 DVISQNIVFYGFLRNRETESGFVLLKRM--LGSGGFDHATLTIVLSVCDTPEFCLVTKMI 180

Query: 181 HGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRH 240
           H  A LSGYD+EI+VGN LI+SYFKCGC   G  VF  M  RNVIT TAVISGL +N  H
Sbjct: 181 HALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELH 240

Query: 241 EHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSA 300
           E  L+LF  +M  G V PNS+TYLS L ACSG + + EG QIH L+ K GI+S+LCI SA
Sbjct: 241 EDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 300

Query: 301 LMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKID 360
           LMDMYSK G I DAW IFES  E D VS+TVIL G   NG EEEAIQ F++ML+ G++ID
Sbjct: 301 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 360

Query: 361 ENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFD 420
            NVVSAVLGV   D SLGLG+Q+HS V+K+ FS N FV+NGLINMYSKCG L +S  VF 
Sbjct: 361 ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 420

Query: 421 RMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKK 480
           RM +RN V+WNSMIAAFARHG GL AL+LYE M     KPTD+TFLSLLHACSHVGL+ K
Sbjct: 421 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDK 480

Query: 481 GMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGAC 540
           G E L  M + HG+ PR+EHY C++DMLGRAGLL EA++FI+ LP +P   +WQALLGAC
Sbjct: 481 GRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGAC 540

Query: 541 SLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETG 600
           S +GD+E+G+YAAE LF   P SS  ++L+ANIYSS G WKERA+TI++MK +G+ KETG
Sbjct: 541 SFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETG 600

Query: 601 ISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDP 655
           IS IEI+ K HSF V DK+HPQAE IY VL  LF +MVDEGY PDK+FIL Y  DDR   
Sbjct: 601 ISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGT 657

BLAST of Lsi11G005470 vs. Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.6e-114
Identity = 229/623 (36.76%), Postives = 360/623 (57.78%), Query Frame = 1

Query: 37  PSSTFVLKHVDPSFLLSVCGREGHLHLGSSLHASITKSFELSNHDNGVVIMNSLISMYER 96
           P S  +L    P + L+    E  L  G  +H  +  +  +   D  V I N L++MY +
Sbjct: 308 PESYVILLSSFPEYSLA---EEVGLKKGREVHGHVITTGLV---DFMVGIGNGLVNMYAK 367

Query: 97  CGKLPDAVKVFDEMLTRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTT 156
           CG + DA +VF  M  +D++SWN++I G  +NG F      +K+M    D      TL +
Sbjct: 368 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLIS 427

Query: 157 ILSACDGLEFCCIIKMVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERN 216
            LS+C  L++  + + +HG +   G D  ++V NAL++ Y + G ++   ++F  M E +
Sbjct: 428 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 487

Query: 217 VITWTAVISGLAQNGRH-EHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQI 276
            ++W ++I  LA++ R    ++  F      G  + N +T+ S+L+A S L   E G QI
Sbjct: 488 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQI 547

Query: 277 HGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWKIFES-AEEFDMVSLTVILAGFTHNGC 336
           HGL LK  I  +    +AL+  Y K G +    KIF   AE  D V+   +++G+ HN  
Sbjct: 548 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 607

Query: 337 EEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNG 396
             +A+ +   ML+ G ++D  + + VL  F +  +L  G +VH+  V+     +  V + 
Sbjct: 608 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 667

Query: 397 LINMYSKCGALDESVKVFDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPT 456
           L++MYSKCG LD +++ F+ M  RNS +WNSMI+ +ARHG G +AL+L+E MKL+G  P 
Sbjct: 668 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 727

Query: 457 D-ITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNF 516
           D +TF+ +L ACSH GLL++G +  ESM+  +G+ PR EH++C+ D+LGRAG L +  +F
Sbjct: 728 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 787

Query: 517 IEKLPEQPGLHVWQALLGACSLYG--DSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEG 576
           IEK+P +P + +W+ +LGAC       +E+GK AAE LF   P ++V YVLL N+Y++ G
Sbjct: 788 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 847

Query: 577 NWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMV 636
            W++  +  +KMK+  + KE G SW+ +   VH F  GDK HP A++IY  L EL   M 
Sbjct: 848 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 907

Query: 637 DEGYMPDKKFILYYLDDDRRDPI 655
           D GY+P   F LY L+ + ++ I
Sbjct: 908 DAGYVPQTGFALYDLEQENKEEI 922

BLAST of Lsi11G005470 vs. Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 408.3 bits (1048), Expect = 2.1e-112
Identity = 211/601 (35.11%), Postives = 351/601 (58.40%), Query Frame = 1

Query: 52  LSVCGREGHLHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEML 111
           L+ C    +  LG  +HAS+ KS   S H + + + N+LI+MY RCGK+P A ++  +M 
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKS---STHSSELYVCNALIAMYTRCGKMPQAERILRQMN 350

Query: 112 TRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIK 171
             D ++WN+LI G+++N  +     +F  M   G  K D+ ++T+I++A   L       
Sbjct: 351 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGM 410

Query: 172 MVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNG 231
            +H +    G+D  + VGN LI  Y KC       + F  M ++++I+WT VI+G AQN 
Sbjct: 411 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 470

Query: 232 RHEHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIG 291
            H  +L+LFR++     +E + +   S+L A S L+++    +IH  IL+ G+  D  I 
Sbjct: 471 CHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQ 530

Query: 292 SALMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIK 351
           + L+D+Y K   +G A ++FES +  D+VS T +++    NG E EA+++F +M++ G+ 
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590

Query: 352 IDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKV 411
            D   +  +L    + ++L  G+++H ++++K F     ++  +++MY+ CG L  +  V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650

Query: 412 FDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLL 471
           FDR++ +  + + SMI A+  HG G  A++L++ M+ E   P  I+FL+LL+ACSH GLL
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710

Query: 472 KKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLG 531
            +G  FL+ M  ++ + P  EHY C+VDMLGRA  + EA  F++ +  +P   VW ALL 
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770

Query: 532 ACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKE 591
           AC  + + E+G+ AA+ L    P +    VL++N+++ +G W +  +   KMK  GM K 
Sbjct: 771 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 830

Query: 592 TGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDE-GYMPDKKFILYYLDDDR 651
            G SWIE+D KVH FT  DK HP+++ IY  L E+   +  E GY+ D KF+L+ +D+  
Sbjct: 831 PGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGE 885

BLAST of Lsi11G005470 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-109
Identity = 215/589 (36.50%), Postives = 334/589 (56.71%), Query Frame = 1

Query: 81  DNGVVIMNSLISMYERC-GKLPDAVKVFDEMLTRDTISWNALIGGFMRNGEFCAGFSYFK 140
           ++ V +  SLI M+ +      +A KVFD+M   + ++W  +I   M+ G       +F 
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258

Query: 141 AMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLSGYDQEITVGNALISSYFKC 200
            M L G  + DK TL+++ SAC  LE   + K +H +A  SG   ++    +L+  Y KC
Sbjct: 259 DMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKC 318

Query: 201 ---GCVDLGMQVFYEMGERNVITWTAVISGLAQN-GRHEHSLKLFREMMSCGSVEPNSLT 260
              G VD   +VF  M + +V++WTA+I+G  +N      ++ LF EM++ G VEPN  T
Sbjct: 319 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 378

Query: 261 YLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWKIFESAE 320
           + S   AC  L     G Q+ G   K G+ S+  + ++++ M+ KS R+ DA + FES  
Sbjct: 379 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 438

Query: 321 EFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTSLGLGQQ 380
           E ++VS    L G   N   E+A ++  ++ +  + +     +++L       S+  G+Q
Sbjct: 439 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 498

Query: 381 VHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNSVTWNSMIAAFARHGD 440
           +HS VVK   SCN  V N LI+MYSKCG++D + +VF+ M+ RN ++W SMI  FA+HG 
Sbjct: 499 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 558

Query: 441 GLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNPRSEHYA 500
            ++ L+ +  M  EG KP ++T++++L ACSHVGL+ +G     SM +DH + P+ EHYA
Sbjct: 559 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 618

Query: 501 CVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSEMGKYAAEHLFSETPH 560
           C+VD+L RAGLL++A  FI  +P Q  + VW+  LGAC ++ ++E+GK AA  +    P+
Sbjct: 619 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 678

Query: 561 SSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVGDKMHPQ 620
               Y+ L+NIY+  G W+E     RKMKE  + KE G SWIE+  K+H F VGD  HP 
Sbjct: 679 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 738

Query: 621 AEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDNAICRQRIE 665
           A  IY  L  L   +   GY+PD   +L+ L+++  +     +  Q  E
Sbjct: 739 AHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSE 784

BLAST of Lsi11G005470 vs. Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-108
Identity = 208/605 (34.38%), Postives = 338/605 (55.87%), Query Frame = 1

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           L +G  +HA   +  EL++      I+N+L++MY + GKL  +  +      RD ++WN 
Sbjct: 218 LMMGKQVHAYGLRKGELNSF-----IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 277

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           ++    +N +      Y + M L G  + D+ T++++L AC  LE     K +H +A  +
Sbjct: 278 VLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 337

Query: 181 G-YDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKL 240
           G  D+   VG+AL+  Y  C  V  G +VF  M +R +  W A+I+G +QN   + +L L
Sbjct: 338 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 397

Query: 241 FREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYS 300
           F  M     +  NS T   ++ AC    A      IHG ++K G+  D  + + LMDMYS
Sbjct: 398 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 457

Query: 301 KSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENV--- 360
           + G+I  A +IF   E+ D+V+   ++ G+  +   E+A+ +  KM  +  K+ +     
Sbjct: 458 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 517

Query: 361 --------VSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDES 420
                   +  +L    A ++L  G+++H++ +K N + +  V + L++MY+KCG L  S
Sbjct: 518 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 577

Query: 421 VKVFDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHV 480
            KVFD++ ++N +TWN +I A+  HG+G +A+ L   M ++G KP ++TF+S+  ACSH 
Sbjct: 578 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 637

Query: 481 GLLKKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQ-PGLHVWQ 540
           G++ +G+     M  D+G+ P S+HYACVVD+LGRAG + EA   +  +P        W 
Sbjct: 638 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 697

Query: 541 ALLGACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVG 600
           +LLGA  ++ + E+G+ AA++L    P+ +  YVLLANIYSS G W +     R MKE G
Sbjct: 698 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 757

Query: 601 MAKETGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLD 653
           + KE G SWIE   +VH F  GD  HPQ+E + G L  L+  M  EGY+PD   +L+ ++
Sbjct: 758 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 816

BLAST of Lsi11G005470 vs. TrEMBL
Match: A0A0A0LGC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022820 PE=4 SV=1)

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 596/656 (90.85%), Postives = 624/656 (95.12%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MKLKWVFQK SS LPSW  SLISPF NQFHQNPF E SSTFVL H+DPSFLLS+CGREG+
Sbjct: 1   MKLKWVFQKRSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNHLDPSFLLSICGREGN 60

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           LHLGSSLHASI KSFELSNH NGVVIMNSLISMY+RCGKLPDAVKVFDEM+TRDTISWNA
Sbjct: 61  LHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMITRDTISWNA 120

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           LIGGF+RNG+F AGFSYFKAMCLVGDC+FDKATLTTILSACDGLEFC IIKM+HG AFLS
Sbjct: 121 LIGGFVRNGKFFAGFSYFKAMCLVGDCRFDKATLTTILSACDGLEFCWIIKMMHGLAFLS 180

Query: 181 GYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLF 240
           GY QEITVGNALISSYFKCGCV LGMQVFYEMGERNVITWTAVISGLAQNG HEHSLKLF
Sbjct: 181 GYGQEITVGNALISSYFKCGCVGLGMQVFYEMGERNVITWTAVISGLAQNGYHEHSLKLF 240

Query: 241 REMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSK 300
           +EMMS GSVEPNSLTYLSLLTACSGLEAL+EGCQIHGLI+KLGIQSDLCIGSALMDMYSK
Sbjct: 241 KEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSK 300

Query: 301 SGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAV 360
           SGRIG+AWKIFE AEE DMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGI+ID NVVS V
Sbjct: 301 SGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGNVVSVV 360

Query: 361 LGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNS 420
           LGVFGADTSL LGQQVHSFVVKKNF CNPFVSNGLINMYSKCGALDES+KVFDRM+ERNS
Sbjct: 361 LGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNS 420

Query: 421 VTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLES 480
           VTWNSMIAAFARHGD LKALQLYE+M+LEGAKPTD+TFLSLLHACSH GL+KKGMEFL+S
Sbjct: 421 VTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKS 480

Query: 481 MTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSE 540
           MTKDHGMNPRSEH+ACVVDMLGRAG+LSEARNFIEKLPEQPGL VWQALLGACSLYGDS+
Sbjct: 481 MTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSK 540

Query: 541 MGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEID 600
           +GKYAAEHLFSETP S VPYVLLANIYSSEGNWKERARTIRKMKEVG AKETGISWIEID
Sbjct: 541 IGKYAAEHLFSETPDSPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEID 600

Query: 601 KKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDN 657
           KKVHSFTVGDKMHPQ E+IYGVL ELF+LMVDEGY+PDKKFILYYLDDDRRDPI N
Sbjct: 601 KKVHSFTVGDKMHPQTEMIYGVLWELFILMVDEGYVPDKKFILYYLDDDRRDPIHN 656

BLAST of Lsi11G005470 vs. TrEMBL
Match: B9RF61_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1431500 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 3.1e-280
Identity = 479/712 (67.28%), Postives = 574/712 (80.62%), Query Frame = 1

Query: 190 NALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLFREMMSCGSV 249
           N ++S + + G +D G QVF EM ERNVITWTA+ISGL+QN  +E SL LF +M  CG +
Sbjct: 27  NTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMR-CGLI 86

Query: 250 EPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWK 309
           EPN LTYLS LTACSGL+ALE+G QIHGL+ KLGIQS+LCI SALMD+YSK G + DA +
Sbjct: 87  EPNFLTYLSSLTACSGLQALEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARR 146

Query: 310 IFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTS 369
           +FESA E D VS+TVIL GFT NG EEEAI+ F+KM+ +G ++D N+VSAVLG  G DTS
Sbjct: 147 VFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGACGVDTS 206

Query: 370 LGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNSVTWNSMIAA 429
           LGLG+Q+HS V+K++   NPFV NGLINMYSKCG L ES+KVF+ +  RNSV+WNSMIAA
Sbjct: 207 LGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVFNGLTCRNSVSWNSMIAA 266

Query: 430 FARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNP 489
           FARHGDG +AL+LYE M  EGA PTD+TFLSLLHACSHVGL+ KGM+FL+SMTK +G++P
Sbjct: 267 FARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMTKVYGISP 326

Query: 490 RSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSEMGKYAAEHL 549
           R+EHYACVVDMLGRAGLL+EA++ IE+L  +P + +WQALLGACS+ GD+E+GKYAAE L
Sbjct: 327 RAEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIGKYAAEQL 386

Query: 550 FSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVG 609
               P    PYVLLANIYSS+G W ERARTI++MKE+G+AKETGISWIEI+KKVHSF V 
Sbjct: 387 LLLEPKKPAPYVLLANIYSSKGRWDERARTIKRMKEMGVAKETGISWIEIEKKVHSFVVE 446

Query: 610 DKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDD-----------------RRD 669
           DK HPQAEIIYGVL ELF LM+DEGY+PDK+FILYY++ D                  R+
Sbjct: 447 DKKHPQAEIIYGVLAELFRLMIDEGYVPDKRFILYYMNQDGKSVTYPNGHNLFSNFNSRN 506

Query: 670 PID---------NAICRQRIEGEDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVKQFH 729
           P+             C +RI G+D PLSS+ AA+ +LGVDP CS +ELKAAFRAKVKQFH
Sbjct: 507 PLRFPSHSNSKFTVNCSERI-GDDTPLSSSSAAHMVLGVDPGCSAAELKAAFRAKVKQFH 566

Query: 730 PDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVG 789
           PDVNR+    D+MIRRVIQAYE+LS++SR+E IE ECLDPF+NPECEAFD+FVNE LC G
Sbjct: 567 PDVNRDRKFPDTMIRRVIQAYEILSNFSRSEIIESECLDPFDNPECEAFDIFVNEVLCAG 626

Query: 790 KACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCIHYVTPLQRIIL 849
           K CPYSCV  APH F +ASSTGTARA SQGH EDY+VQ+AVGQCPRSCIHYVTP QRIIL
Sbjct: 627 KGCPYSCVQTAPHAFAYASSTGTARAISQGHGEDYKVQLAVGQCPRSCIHYVTPSQRIIL 686

Query: 850 EELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERVDWY 876
           EELLDS L VPYDNSAEAD+LYSLI+K+ +ENNRY+KPK++PK ST+ V+W+
Sbjct: 687 EELLDSILGVPYDNSAEADMLYSLIVKATYENNRYQKPKKQPKTSTQHVEWF 736

BLAST of Lsi11G005470 vs. TrEMBL
Match: B9I7R7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02200g PE=4 SV=2)

HSP 1 Score: 862.8 bits (2228), Expect = 3.5e-247
Identity = 427/653 (65.39%), Postives = 514/653 (78.71%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MK KWV  KL+S +PSWA SL SP   + +  P ++ SS F+L HVD   LLS+CGREG+
Sbjct: 1   MKSKWVIHKLNSHIPSWATSLTSPLKAKTYHTPSSKTSS-FLLNHVDIGHLLSICGREGY 60

Query: 61  LHLGSSLHASITKSFELSN--HDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISW 120
           LHLGSSLHASI K+ E  N    N  VI NSL+SMY + G L DA K+FDEM  RDT+SW
Sbjct: 61  LHLGSSLHASIIKTHEFFNPLEQNAFVIWNSLLSMYAKNGVLTDAAKLFDEMPMRDTVSW 120

Query: 121 NALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAF 180
           N +I GF+++G F  GF +FK M  +G  + D+ATLTTILSACD  E   + KMVH  A 
Sbjct: 121 NIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLAV 180

Query: 181 LSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLK 240
           L+G+ +EI+VGNALI+SYFKCG    GMQVF EM ERNVITWTA+ISGL Q+  +  SL+
Sbjct: 181 LNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLR 240

Query: 241 LFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMY 300
           LF EM + G VEPNSLTYLS L ACSGL+AL EGCQIHG + KLG+QSD C+ SALMDMY
Sbjct: 241 LFVEMTN-GLVEPNSLTYLSSLMACSGLQALREGCQIHGRLWKLGLQSDFCVESALMDMY 300

Query: 301 SKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVS 360
           SK G +GD  +IFESA + D VS+T+ILAGF  NG EEEA+Q F+KML+ G +ID N+VS
Sbjct: 301 SKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVS 360

Query: 361 AVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQER 420
           AVLGVFGADTSLGLGQQ+HS V+K++F  NPFV NGLINMYSKCG L++S KVF RM   
Sbjct: 361 AVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCM 420

Query: 421 NSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFL 480
           NSV+WNSMIAAFARHGDG +ALQLY+ M+L+G +PTD+TFLSLLHACSHVGL++KGMEFL
Sbjct: 421 NSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFL 480

Query: 481 ESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGD 540
           +SMT+ H + PR EHYACVVDMLGRAGLL+EA+ FIE LP +P + VWQALLGAC ++GD
Sbjct: 481 KSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGD 540

Query: 541 SEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIE 600
            EMGKYAAEHL    P    PY+LLANIYSS+G WKERA+TI++MKE+ +AKETGISWIE
Sbjct: 541 PEMGKYAAEHLILSAPEKPSPYILLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIE 600

Query: 601 IDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRR 652
           I+  +HSF V DKMHPQAEIIYGVL ELF  M+DEGY+PDK++IL Y++ D +
Sbjct: 601 IENNLHSFVVEDKMHPQAEIIYGVLAELFGHMIDEGYVPDKRYILSYVNQDEK 651

BLAST of Lsi11G005470 vs. TrEMBL
Match: M5WNH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023606mg PE=4 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 1.6e-244
Identity = 427/647 (66.00%), Postives = 512/647 (79.13%), Query Frame = 1

Query: 1   MKLKWVFQ--KLSSQ-LPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGR 60
           MK +WVFQ   L+S  L SWA+SLISPF  +  QNP AE +S  +L HVD S LLS+CG+
Sbjct: 1   MKSRWVFQFQNLNSHYLSSWASSLISPFKAKVQQNPSAETTSRLILNHVDISLLLSLCGK 60

Query: 61  EGHLHLGSSLHASITKSFEL------SNHDNGVVIMNSLISMYERCGKLPDAVKVFDEML 120
           EG+ HLGSSLHASI K+ E        ++   +V+ NSL+S+Y +CG+  +AVK+FD M 
Sbjct: 61  EGNFHLGSSLHASIIKNPEFFYPESQDDYRYVLVVWNSLLSVYLKCGQFSNAVKLFDNMG 120

Query: 121 TRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIK 180
            +DT+SWN +I GF RNGE   GF YFK M      +FD+ATLT+IL+A DG EFC + K
Sbjct: 121 MKDTVSWNTMISGFFRNGESDVGFGYFKQMRGSDFYRFDRATLTSILAAFDGPEFCHLNK 180

Query: 181 MVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNG 240
           M+HG   L+G+++E  VGNALI+SY KCG    G +VF EM ERNVITWTA+ISGLAQN 
Sbjct: 181 MMHGLVVLNGFERETAVGNALITSYCKCGSFGSGRRVFDEMFERNVITWTAMISGLAQNE 240

Query: 241 RHEHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIG 300
            +  SL+LF EM S G V+PNSLTYL+ LTACSGL+A+  G QIHGL  KLGIQSDLCI 
Sbjct: 241 FYVESLELFLEMRS-GVVDPNSLTYLASLTACSGLQAISVGRQIHGLAWKLGIQSDLCIE 300

Query: 301 SALMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIK 360
           SALMDMYSK G + DAW+IFES EE D +S+TVIL GF  NG E EAIQIF+KM+K GI+
Sbjct: 301 SALMDMYSKCGSLEDAWRIFESTEELDEISMTVILVGFAQNGFESEAIQIFVKMMKAGIE 360

Query: 361 IDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKV 420
           ID N+VSAVLGVFG DTSLGLG+Q+HS +VKK+F  N FV NGLINMYSKCG L +SVKV
Sbjct: 361 IDPNMVSAVLGVFGVDTSLGLGKQLHSLIVKKSFGHNSFVCNGLINMYSKCGELGDSVKV 420

Query: 421 FDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLL 480
           F RM +RNS++WNSMIAAFARHGDG KALQLYE MK++G +PTD+TFLSLLHACSHVG +
Sbjct: 421 FSRMPQRNSISWNSMIAAFARHGDGSKALQLYEEMKMDGVQPTDVTFLSLLHACSHVGFV 480

Query: 481 KKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLG 540
           ++GMEFL SM +D G++PR EHYACVVDMLGRAGLL++A+NFIE LPE PG+ VWQALLG
Sbjct: 481 ERGMEFLNSMNEDPGISPRPEHYACVVDMLGRAGLLTDAKNFIEGLPENPGVLVWQALLG 540

Query: 541 ACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKE 600
           ACS++GDSE+GKYAA+ L    P +  PYVLLANIYSSEG WKERARTI+ MKE+G+AKE
Sbjct: 541 ACSIHGDSEIGKYAADQLLLAAPETPAPYVLLANIYSSEGRWKERARTIKGMKELGVAKE 600

Query: 601 TGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPD 639
           TGISWIEI+ KV SF VGD+MHPQAEIIYGVL EL+ LM DEGY+P+
Sbjct: 601 TGISWIEIENKVQSFVVGDRMHPQAEIIYGVLAELYRLMTDEGYVPN 646

BLAST of Lsi11G005470 vs. TrEMBL
Match: A0A061F359_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_026554 PE=4 SV=1)

HSP 1 Score: 853.6 bits (2204), Expect = 2.1e-244
Identity = 416/664 (62.65%), Postives = 517/664 (77.86%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQ-FHQNPFAEPSSTFVLKHVDPSFLLSVCGREG 60
           MK +W+FQKL+  LPS  +S++SPF  Q  +Q P ++ +    L H+  S LLS+ G++G
Sbjct: 1   MKSEWIFQKLTPHLPSCFSSILSPFRTQKLYQFPSSD-APKLALNHIGISLLLSISGKQG 60

Query: 61  HLHLGSSLHASITKSFELS-------NHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLT 120
            + LGSS+HAS+ K+ E+        N DN +++ NSL+ M  +CG L D  K+FDEM  
Sbjct: 61  FVLLGSSIHASLIKNPEICKPAGGFRNSDNALLVWNSLLGMCSKCGTLTDLTKLFDEMPM 120

Query: 121 RDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKM 180
           +DT+SWN +I GF+RNGEF  GF YFK M   G C FD+ATLTTILSACDG+EFCC+ KM
Sbjct: 121 KDTVSWNTMISGFLRNGEFDNGFRYFKQMRKSGFCSFDQATLTTILSACDGVEFCCVNKM 180

Query: 181 VHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGR 240
           +HG  FL+GY++EI+VGNALI+SY KCGC+  G QVF EM ERNVITWTA+ISGL QN  
Sbjct: 181 MHGLLFLNGYEREISVGNALITSYSKCGCLSSGRQVFDEMFERNVITWTAMISGLVQNEL 240

Query: 241 HEHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGS 300
           +E SL+LF EM   GSV PNSLTYLS L ACSGL+AL EG QIHGL+ KLGIQS+LCI S
Sbjct: 241 YEESLELFNEMR-LGSVCPNSLTYLSSLMACSGLQALNEGRQIHGLLWKLGIQSELCIES 300

Query: 301 ALMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKI 360
           +LMDMYSK G + DAW+IFESA++ D VS+TVIL G   NG EE+A + F++M + GI+I
Sbjct: 301 SLMDMYSKCGSVNDAWQIFESAQDLDEVSMTVILVGLAQNGFEEQAKRFFVRMFESGIEI 360

Query: 361 DENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVF 420
           D N++SAV G+FG DTSLGLG+Q+HS ++K+NF CN +VSNGLINMYSKCG L+ESVKVF
Sbjct: 361 DPNMLSAVFGIFGEDTSLGLGKQIHSLIIKRNFGCNSYVSNGLINMYSKCGDLEESVKVF 420

Query: 421 DRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLK 480
            RM +RNS++WNS+IAAFARHGDG +ALQLYE M+ EG +PTD+TFLSLLHACSHVGL++
Sbjct: 421 SRMSQRNSISWNSIIAAFARHGDGYRALQLYEEMRSEGIEPTDVTFLSLLHACSHVGLVE 480

Query: 481 KGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGA 540
           KGME L+SMT+ HG+ PR+EHYA VVDMLGRAGLL+EA+  IE LP +P + VWQALLGA
Sbjct: 481 KGMELLKSMTEVHGILPRAEHYASVVDMLGRAGLLNEAKTLIEGLPFKPDVLVWQALLGA 540

Query: 541 CSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKET 600
           C ++GD EMGKYAA+ L   TP S VPYV +ANI S  G WKERARTI++MKEVG+ KET
Sbjct: 541 CGIHGDFEMGKYAADQLLIATPESPVPYVSMANICSLRGKWKERARTIKRMKEVGVVKET 600

Query: 601 GISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRD 657
           GISWIE +KKVHSF V D++HPQAE +YGVL ELF LM+DEGY+P++ F   Y+D D R 
Sbjct: 601 GISWIETEKKVHSFVVQDRIHPQAEAVYGVLKELFRLMLDEGYVPNESFTFSYIDQDARG 660

BLAST of Lsi11G005470 vs. TAIR10
Match: AT3G05340.1 (AT3G05340.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 771.9 bits (1992), Expect = 4.1e-223
Identity = 396/661 (59.91%), Postives = 477/661 (72.16%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           M  +WV QKL+S LPS  ++++SP      Q+P  + S TF+L HVD S LLS+CGREG 
Sbjct: 1   MNSRWVIQKLTSHLPSCLSTVLSPSKILIRQSPNYQVS-TFLLNHVDMSLLLSICGREGW 60

Query: 61  L-HLGSSLHASITKSFELSN------HDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTR 120
             HLG  LHASI K+ E         H N +V+ NSL+S+Y +CGKL DA+K+FDEM  R
Sbjct: 61  FPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR 120

Query: 121 DTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMV 180
           D IS N +  GF+RN E  +GF   K M  +G   FD ATLT +LS CD  EFC + KM+
Sbjct: 121 DVISQNIVFYGFLRNRETESGFVLLKRM--LGSGGFDHATLTIVLSVCDTPEFCLVTKMI 180

Query: 181 HGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRH 240
           H  A LSGYD+EI+VGN LI+SYFKCGC   G  VF  M  RNVIT TAVISGL +N  H
Sbjct: 181 HALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELH 240

Query: 241 EHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSA 300
           E  L+LF  +M  G V PNS+TYLS L ACSG + + EG QIH L+ K GI+S+LCI SA
Sbjct: 241 EDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 300

Query: 301 LMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKID 360
           LMDMYSK G I DAW IFES  E D VS+TVIL G   NG EEEAIQ F++ML+ G++ID
Sbjct: 301 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 360

Query: 361 ENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFD 420
            NVVSAVLGV   D SLGLG+Q+HS V+K+ FS N FV+NGLINMYSKCG L +S  VF 
Sbjct: 361 ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 420

Query: 421 RMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKK 480
           RM +RN V+WNSMIAAFARHG GL AL+LYE M     KPTD+TFLSLLHACSHVGL+ K
Sbjct: 421 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDK 480

Query: 481 GMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGAC 540
           G E L  M + HG+ PR+EHY C++DMLGRAGLL EA++FI+ LP +P   +WQALLGAC
Sbjct: 481 GRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGAC 540

Query: 541 SLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETG 600
           S +GD+E+G+YAAE LF   P SS  ++L+ANIYSS G WKERA+TI++MK +G+ KETG
Sbjct: 541 SFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETG 600

Query: 601 ISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDP 655
           IS IEI+ K HSF V DK+HPQAE IY VL  LF +MVDEGY PDK+FIL Y  DDR   
Sbjct: 601 ISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGT 657

BLAST of Lsi11G005470 vs. TAIR10
Match: AT5G09950.1 (AT5G09950.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 412.9 bits (1060), Expect = 4.9e-115
Identity = 229/623 (36.76%), Postives = 360/623 (57.78%), Query Frame = 1

Query: 37  PSSTFVLKHVDPSFLLSVCGREGHLHLGSSLHASITKSFELSNHDNGVVIMNSLISMYER 96
           P S  +L    P + L+    E  L  G  +H  +  +  +   D  V I N L++MY +
Sbjct: 308 PESYVILLSSFPEYSLA---EEVGLKKGREVHGHVITTGLV---DFMVGIGNGLVNMYAK 367

Query: 97  CGKLPDAVKVFDEMLTRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTT 156
           CG + DA +VF  M  +D++SWN++I G  +NG F      +K+M    D      TL +
Sbjct: 368 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLIS 427

Query: 157 ILSACDGLEFCCIIKMVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERN 216
            LS+C  L++  + + +HG +   G D  ++V NAL++ Y + G ++   ++F  M E +
Sbjct: 428 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 487

Query: 217 VITWTAVISGLAQNGRH-EHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQI 276
            ++W ++I  LA++ R    ++  F      G  + N +T+ S+L+A S L   E G QI
Sbjct: 488 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQI 547

Query: 277 HGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWKIFES-AEEFDMVSLTVILAGFTHNGC 336
           HGL LK  I  +    +AL+  Y K G +    KIF   AE  D V+   +++G+ HN  
Sbjct: 548 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 607

Query: 337 EEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNG 396
             +A+ +   ML+ G ++D  + + VL  F +  +L  G +VH+  V+     +  V + 
Sbjct: 608 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 667

Query: 397 LINMYSKCGALDESVKVFDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPT 456
           L++MYSKCG LD +++ F+ M  RNS +WNSMI+ +ARHG G +AL+L+E MKL+G  P 
Sbjct: 668 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 727

Query: 457 D-ITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNF 516
           D +TF+ +L ACSH GLL++G +  ESM+  +G+ PR EH++C+ D+LGRAG L +  +F
Sbjct: 728 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 787

Query: 517 IEKLPEQPGLHVWQALLGACSLYG--DSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEG 576
           IEK+P +P + +W+ +LGAC       +E+GK AAE LF   P ++V YVLL N+Y++ G
Sbjct: 788 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 847

Query: 577 NWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMV 636
            W++  +  +KMK+  + KE G SW+ +   VH F  GDK HP A++IY  L EL   M 
Sbjct: 848 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 907

Query: 637 DEGYMPDKKFILYYLDDDRRDPI 655
           D GY+P   F LY L+ + ++ I
Sbjct: 908 DAGYVPQTGFALYDLEQENKEEI 922

BLAST of Lsi11G005470 vs. TAIR10
Match: AT3G63370.1 (AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 397.5 bits (1020), Expect = 2.1e-110
Identity = 203/575 (35.30%), Postives = 336/575 (58.43%), Query Frame = 1

Query: 52  LSVCGREGHLHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEML 111
           L+ C    +  LG  +HAS+ KS   S H + + + N+LI+MY RCGK+P A ++  +M 
Sbjct: 291 LTACDGFSYAKLGKEIHASVLKS---STHSSELYVCNALIAMYTRCGKMPQAERILRQMN 350

Query: 112 TRDTISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIK 171
             D ++WN+LI G+++N  +     +F  M   G  K D+ ++T+I++A   L       
Sbjct: 351 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGM 410

Query: 172 MVHGFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNG 231
            +H +    G+D  + VGN LI  Y KC       + F  M ++++I+WT VI+G AQN 
Sbjct: 411 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 470

Query: 232 RHEHSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIG 291
            H  +L+LFR++     +E + +   S+L A S L+++    +IH  IL+ G+  D  I 
Sbjct: 471 CHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQ 530

Query: 292 SALMDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIK 351
           + L+D+Y K   +G A ++FES +  D+VS T +++    NG E EA+++F +M++ G+ 
Sbjct: 531 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 590

Query: 352 IDENVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKV 411
            D   +  +L    + ++L  G+++H ++++K F     ++  +++MY+ CG L  +  V
Sbjct: 591 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 650

Query: 412 FDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLL 471
           FDR++ +  + + SMI A+  HG G  A++L++ M+ E   P  I+FL+LL+ACSH GLL
Sbjct: 651 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 710

Query: 472 KKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLG 531
            +G  FL+ M  ++ + P  EHY C+VDMLGRA  + EA  F++ +  +P   VW ALL 
Sbjct: 711 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 770

Query: 532 ACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKE 591
           AC  + + E+G+ AA+ L    P +    VL++N+++ +G W +  +   KMK  GM K 
Sbjct: 771 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 830

Query: 592 TGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMEL 627
            G SWIE+D KVH FT  DK HP+++ IY  L E+
Sbjct: 831 PGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 859

BLAST of Lsi11G005470 vs. TAIR10
Match: AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 397.1 bits (1019), Expect = 2.8e-110
Identity = 215/589 (36.50%), Postives = 334/589 (56.71%), Query Frame = 1

Query: 81  DNGVVIMNSLISMYERC-GKLPDAVKVFDEMLTRDTISWNALIGGFMRNGEFCAGFSYFK 140
           ++ V +  SLI M+ +      +A KVFD+M   + ++W  +I   M+ G       +F 
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258

Query: 141 AMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLSGYDQEITVGNALISSYFKC 200
            M L G  + DK TL+++ SAC  LE   + K +H +A  SG   ++    +L+  Y KC
Sbjct: 259 DMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKC 318

Query: 201 ---GCVDLGMQVFYEMGERNVITWTAVISGLAQN-GRHEHSLKLFREMMSCGSVEPNSLT 260
              G VD   +VF  M + +V++WTA+I+G  +N      ++ LF EM++ G VEPN  T
Sbjct: 319 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 378

Query: 261 YLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSKSGRIGDAWKIFESAE 320
           + S   AC  L     G Q+ G   K G+ S+  + ++++ M+ KS R+ DA + FES  
Sbjct: 379 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 438

Query: 321 EFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAVLGVFGADTSLGLGQQ 380
           E ++VS    L G   N   E+A ++  ++ +  + +     +++L       S+  G+Q
Sbjct: 439 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 498

Query: 381 VHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNSVTWNSMIAAFARHGD 440
           +HS VVK   SCN  V N LI+MYSKCG++D + +VF+ M+ RN ++W SMI  FA+HG 
Sbjct: 499 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 558

Query: 441 GLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLESMTKDHGMNPRSEHYA 500
            ++ L+ +  M  EG KP ++T++++L ACSHVGL+ +G     SM +DH + P+ EHYA
Sbjct: 559 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 618

Query: 501 CVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSEMGKYAAEHLFSETPH 560
           C+VD+L RAGLL++A  FI  +P Q  + VW+  LGAC ++ ++E+GK AA  +    P+
Sbjct: 619 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 678

Query: 561 SSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEIDKKVHSFTVGDKMHPQ 620
               Y+ L+NIY+  G W+E     RKMKE  + KE G SWIE+  K+H F VGD  HP 
Sbjct: 679 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 738

Query: 621 AEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDNAICRQRIE 665
           A  IY  L  L   +   GY+PD   +L+ L+++  +     +  Q  E
Sbjct: 739 AHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSE 784

BLAST of Lsi11G005470 vs. TAIR10
Match: AT3G57430.1 (AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-109
Identity = 208/605 (34.38%), Postives = 338/605 (55.87%), Query Frame = 1

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           L +G  +HA   +  EL++      I+N+L++MY + GKL  +  +      RD ++WN 
Sbjct: 218 LMMGKQVHAYGLRKGELNSF-----IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 277

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           ++    +N +      Y + M L G  + D+ T++++L AC  LE     K +H +A  +
Sbjct: 278 VLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 337

Query: 181 G-YDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKL 240
           G  D+   VG+AL+  Y  C  V  G +VF  M +R +  W A+I+G +QN   + +L L
Sbjct: 338 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 397

Query: 241 FREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYS 300
           F  M     +  NS T   ++ AC    A      IHG ++K G+  D  + + LMDMYS
Sbjct: 398 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 457

Query: 301 KSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENV--- 360
           + G+I  A +IF   E+ D+V+   ++ G+  +   E+A+ +  KM  +  K+ +     
Sbjct: 458 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 517

Query: 361 --------VSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDES 420
                   +  +L    A ++L  G+++H++ +K N + +  V + L++MY+KCG L  S
Sbjct: 518 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 577

Query: 421 VKVFDRMQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHV 480
            KVFD++ ++N +TWN +I A+  HG+G +A+ L   M ++G KP ++TF+S+  ACSH 
Sbjct: 578 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 637

Query: 481 GLLKKGMEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQ-PGLHVWQ 540
           G++ +G+     M  D+G+ P S+HYACVVD+LGRAG + EA   +  +P        W 
Sbjct: 638 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 697

Query: 541 ALLGACSLYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVG 600
           +LLGA  ++ + E+G+ AA++L    P+ +  YVLLANIYSS G W +     R MKE G
Sbjct: 698 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 757

Query: 601 MAKETGISWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLD 653
           + KE G SWIE   +VH F  GD  HPQ+E + G L  L+  M  EGY+PD   +L+ ++
Sbjct: 758 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 816

BLAST of Lsi11G005470 vs. NCBI nr
Match: gi|778666838|ref|XP_011648824.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Cucumis sativus])

HSP 1 Score: 1623.2 bits (4202), Expect = 0.0e+00
Identity = 800/902 (88.69%), Postives = 833/902 (92.35%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MKLKWVFQK SS LPSW  SLISPF NQFHQNPF E SSTFVL H+DPSFLLS+CGREG+
Sbjct: 1   MKLKWVFQKRSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNHLDPSFLLSICGREGN 60

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           LHLGSSLHASI KSFELSNH NGVVIMNSLISMY+RCGKLPDAVKVFDEM+TRDTISWNA
Sbjct: 61  LHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMITRDTISWNA 120

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           LIGGF+RNG+F AGFSYFKAMCLVGDC+FDKATLTTILSACDGLEFC IIKM+HG AFLS
Sbjct: 121 LIGGFVRNGKFFAGFSYFKAMCLVGDCRFDKATLTTILSACDGLEFCWIIKMMHGLAFLS 180

Query: 181 GYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLF 240
           GY QEITVGNALISSYFKCGCV LGMQVFYEMGERNVITWTAVISGLAQNG HEHSLKLF
Sbjct: 181 GYGQEITVGNALISSYFKCGCVGLGMQVFYEMGERNVITWTAVISGLAQNGYHEHSLKLF 240

Query: 241 REMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSK 300
           +EMMS GSVEPNSLTYLSLLTACSGLEAL+EGCQIHGLI+KLGIQSDLCIGSALMDMYSK
Sbjct: 241 KEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSK 300

Query: 301 SGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAV 360
           SGRIG+AWKIFE AEE DMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGI+ID NVVS V
Sbjct: 301 SGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGNVVSVV 360

Query: 361 LGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNS 420
           LGVFGADTSL LGQQVHSFVVKKNF CNPFVSNGLINMYSKCGALDES+KVFDRM+ERNS
Sbjct: 361 LGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNS 420

Query: 421 VTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLES 480
           VTWNSMIAAFARHGD LKALQLYE+M+LEGAKPTD+TFLSLLHACSH GL+KKGMEFL+S
Sbjct: 421 VTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKS 480

Query: 481 MTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSE 540
           MTKDHGMNPRSEH+ACVVDMLGRAG+LSEARNFIEKLPEQPGL VWQALLGACSLYGDS+
Sbjct: 481 MTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSK 540

Query: 541 MGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEID 600
           +GKYAAEHLFSETP S VPYVLLANIYSSEGNWKERARTIRKMKEVG AKETGISWIEID
Sbjct: 541 IGKYAAEHLFSETPDSPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEID 600

Query: 601 KKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDNA--- 660
           KKVHSFTVGDKMHPQ E+IYGVL ELF+LMVDEGY+PDKKFILYYLDDDRRDPI N    
Sbjct: 601 KKVHSFTVGDKMHPQTEMIYGVLWELFILMVDEGYVPDKKFILYYLDDDRRDPIHNGHND 660

Query: 661 ------------------------ICRQRIEGEDAPLSSAMAAYRLLGVDPTCSESELKA 720
                                   ICRQR EGED  LS  MAAYRLLG+DPTCSESELKA
Sbjct: 661 TSNFPSISKSSILFPSSSTSRFTPICRQRTEGEDTLLSGPMAAYRLLGLDPTCSESELKA 720

Query: 721 AFRAKVKQFHPDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD 780
           AFRAKVKQFHPDVNRN NDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD
Sbjct: 721 AFRAKVKQFHPDVNRNGNDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD 780

Query: 781 VFVNEFLCVGKACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCIH 840
           VFVNEFLCVGK CPYSCVDRAPHVFTFASSTGTARA SQGHSEDYQ+Q+AVGQCPRSCIH
Sbjct: 781 VFVNEFLCVGKGCPYSCVDRAPHVFTFASSTGTARAMSQGHSEDYQLQMAVGQCPRSCIH 840

Query: 841 YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERVD 876
           YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLI+KSKFENNRYKKPKREPK STE+VD
Sbjct: 841 YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTEQVD 900

BLAST of Lsi11G005470 vs. NCBI nr
Match: gi|659070327|ref|XP_008454568.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Cucumis melo])

HSP 1 Score: 1619.0 bits (4191), Expect = 0.0e+00
Identity = 801/902 (88.80%), Postives = 830/902 (92.02%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MKLKWVFQK SS LPS   SLI PF NQFHQNPFAE SSTFVL H+D SFLLS+CGREG+
Sbjct: 1   MKLKWVFQKSSSHLPSLVTSLIFPFRNQFHQNPFAETSSTFVLNHLDVSFLLSICGREGN 60

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           LHLGSSLHASI KSFE SNH NGVVIMNSLISMY+RCGKL DAVKVFDEMLTRDTISWNA
Sbjct: 61  LHLGSSLHASIIKSFEPSNHYNGVVIMNSLISMYDRCGKLSDAVKVFDEMLTRDTISWNA 120

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           LIGGF+RNG+F AGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKM+HG AFLS
Sbjct: 121 LIGGFVRNGKFFAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMMHGLAFLS 180

Query: 181 GYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLF 240
           G+ QEITVGNAL+SSY KCGCV LGMQVF EMGERNVITWTAVISGLA+NG HEHSLKLF
Sbjct: 181 GFGQEITVGNALVSSYLKCGCVGLGMQVFDEMGERNVITWTAVISGLARNGHHEHSLKLF 240

Query: 241 REMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSK 300
           +EMMS GSVEPNSLTYLSLLTACSGLEAL+EGCQIHGLILKLGIQSDLCIGSALMDMYSK
Sbjct: 241 KEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLILKLGIQSDLCIGSALMDMYSK 300

Query: 301 SGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAV 360
           SGRIG+AWKIFESAEE DMVSLTVILAGFT NGCEEEAIQIFLKMLKMGI+ID NVVS V
Sbjct: 301 SGRIGEAWKIFESAEELDMVSLTVILAGFTQNGCEEEAIQIFLKMLKMGIEIDGNVVSVV 360

Query: 361 LGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNS 420
           LGVFGADTSL LGQQVHSFVVKKNF CNPFVSNGLINMYSKCGALDES+KVFDRM+ERNS
Sbjct: 361 LGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNS 420

Query: 421 VTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLES 480
           VTWNSMIAAFARHGD  KALQLYENM+LEGAKPTD+TFLSLLHACSH GL+KKGMEFL+S
Sbjct: 421 VTWNSMIAAFARHGDASKALQLYENMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKS 480

Query: 481 MTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSE 540
           MTKDHGMNPRSEHYACVVDMLGRAG+LSEARNFIEKLPEQPGL VWQALLGACSLYGDSE
Sbjct: 481 MTKDHGMNPRSEHYACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSE 540

Query: 541 MGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEID 600
           MGKYAA+HLF ETPHS+VPYVLLANIYSSEGNWKERARTIR+MKEVG AKETGISWIEID
Sbjct: 541 MGKYAADHLFLETPHSTVPYVLLANIYSSEGNWKERARTIRRMKEVGTAKETGISWIEID 600

Query: 601 KKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDN---- 660
           KKVHSFTVGDKMHPQ EIIYGVL ELFVLMVDEGY+PDKKFILYYLDDDRRDPI N    
Sbjct: 601 KKVHSFTVGDKMHPQTEIIYGVLTELFVLMVDEGYVPDKKFILYYLDDDRRDPIHNDHND 660

Query: 661 -----------------------AICRQRIEGEDAPLSSAMAAYRLLGVDPTCSESELKA 720
                                   ICRQRIEGED PLS  MAAYRLLG+DPTCSESELKA
Sbjct: 661 TSNFPSISKSSILFSSSSTSRFTTICRQRIEGEDTPLSGPMAAYRLLGLDPTCSESELKA 720

Query: 721 AFRAKVKQFHPDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD 780
           AFRAKVKQFHPDV RN NDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD
Sbjct: 721 AFRAKVKQFHPDVTRNGNDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFD 780

Query: 781 VFVNEFLCVGKACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCIH 840
           VFVNEFLCVGK CPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQ+Q+AVGQCPRSCIH
Sbjct: 781 VFVNEFLCVGKGCPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQLQMAVGQCPRSCIH 840

Query: 841 YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERVD 876
           YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLI+KSKFENNRYKKPKREPK STERVD
Sbjct: 841 YVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTERVD 900

BLAST of Lsi11G005470 vs. NCBI nr
Match: gi|700205794|gb|KGN60913.1| (hypothetical protein Csa_2G022820 [Cucumis sativus])

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 596/656 (90.85%), Postives = 624/656 (95.12%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MKLKWVFQK SS LPSW  SLISPF NQFHQNPF E SSTFVL H+DPSFLLS+CGREG+
Sbjct: 1   MKLKWVFQKRSSHLPSWVTSLISPFRNQFHQNPFPETSSTFVLNHLDPSFLLSICGREGN 60

Query: 61  LHLGSSLHASITKSFELSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISWNA 120
           LHLGSSLHASI KSFELSNH NGVVIMNSLISMY+RCGKLPDAVKVFDEM+TRDTISWNA
Sbjct: 61  LHLGSSLHASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMITRDTISWNA 120

Query: 121 LIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAFLS 180
           LIGGF+RNG+F AGFSYFKAMCLVGDC+FDKATLTTILSACDGLEFC IIKM+HG AFLS
Sbjct: 121 LIGGFVRNGKFFAGFSYFKAMCLVGDCRFDKATLTTILSACDGLEFCWIIKMMHGLAFLS 180

Query: 181 GYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLKLF 240
           GY QEITVGNALISSYFKCGCV LGMQVFYEMGERNVITWTAVISGLAQNG HEHSLKLF
Sbjct: 181 GYGQEITVGNALISSYFKCGCVGLGMQVFYEMGERNVITWTAVISGLAQNGYHEHSLKLF 240

Query: 241 REMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMYSK 300
           +EMMS GSVEPNSLTYLSLLTACSGLEAL+EGCQIHGLI+KLGIQSDLCIGSALMDMYSK
Sbjct: 241 KEMMSYGSVEPNSLTYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSK 300

Query: 301 SGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVSAV 360
           SGRIG+AWKIFE AEE DMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGI+ID NVVS V
Sbjct: 301 SGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGNVVSVV 360

Query: 361 LGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQERNS 420
           LGVFGADTSL LGQQVHSFVVKKNF CNPFVSNGLINMYSKCGALDES+KVFDRM+ERNS
Sbjct: 361 LGVFGADTSLRLGQQVHSFVVKKNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNS 420

Query: 421 VTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFLES 480
           VTWNSMIAAFARHGD LKALQLYE+M+LEGAKPTD+TFLSLLHACSH GL+KKGMEFL+S
Sbjct: 421 VTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKS 480

Query: 481 MTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGDSE 540
           MTKDHGMNPRSEH+ACVVDMLGRAG+LSEARNFIEKLPEQPGL VWQALLGACSLYGDS+
Sbjct: 481 MTKDHGMNPRSEHHACVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSK 540

Query: 541 MGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIEID 600
           +GKYAAEHLFSETP S VPYVLLANIYSSEGNWKERARTIRKMKEVG AKETGISWIEID
Sbjct: 541 IGKYAAEHLFSETPDSPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEID 600

Query: 601 KKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDN 657
           KKVHSFTVGDKMHPQ E+IYGVL ELF+LMVDEGY+PDKKFILYYLDDDRRDPI N
Sbjct: 601 KKVHSFTVGDKMHPQTEMIYGVLWELFILMVDEGYVPDKKFILYYLDDDRRDPIHN 656

BLAST of Lsi11G005470 vs. NCBI nr
Match: gi|743829857|ref|XP_011023632.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Populus euphratica])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 588/903 (65.12%), Postives = 704/903 (77.96%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MK KWV  KL+S +PSWA SL SP   + +  P ++ SS F+L HVD   LLS+CGREG+
Sbjct: 1   MKSKWVIHKLNSHIPSWATSLTSPLKAKTYHTPSSKTSS-FLLNHVDIGHLLSICGREGY 60

Query: 61  LHLGSSLHASITKSFELSN--HDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRDTISW 120
           LHLGSSLHASI K+ E  N    N  VI NSL+ MY + G L DA K+FDEM  RDT+SW
Sbjct: 61  LHLGSSLHASIIKTHEFFNPLEQNAFVIWNSLLFMYAKNGVLIDAAKLFDEMPRRDTVSW 120

Query: 121 NALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVHGFAF 180
           N +I GF+++G F  GF +FK M  +G  + D+ATLTTILSACD  E   + KMVH  A 
Sbjct: 121 NIMISGFLKDGSFDVGFGFFKQMLSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLAV 180

Query: 181 LSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHEHSLK 240
           L+G+ +EI+VGNALI+SYFKCG    GMQVF EM ERNVITWTA+ISGL Q+  +  SL+
Sbjct: 181 LNGFQREISVGNALITSYFKCGFPSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLR 240

Query: 241 LFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSALMDMY 300
           LF +M + G VEPNSLTYLS L ACSGL+AL EGCQIHG + KLG+QSD C+ SALMDMY
Sbjct: 241 LFVDMTN-GLVEPNSLTYLSSLMACSGLQALREGCQIHGRLWKLGLQSDFCVESALMDMY 300

Query: 301 SKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDENVVS 360
           SK G +GDA +IFESA + D VS+T+ILAGF  NG EEEA+Q F+KML+ G +ID N+VS
Sbjct: 301 SKCGSMGDALQIFESAGQLDEVSMTIILAGFAQNGLEEEAMQFFVKMLEAGTEIDPNMVS 360

Query: 361 AVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDRMQER 420
           AVLGVFGADTSLGLGQQ+HS V+K++F  NPFV NGLINMYSKCG L++S KVF RM   
Sbjct: 361 AVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCM 420

Query: 421 NSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKGMEFL 480
           NS++WNSMIAAFARHGDG +ALQLY+ M+L+G +PTD+TFLSLLHACSHVGL++KGMEFL
Sbjct: 421 NSISWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFL 480

Query: 481 ESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACSLYGD 540
           +SMT+ H + PR EHYACVVDMLGRAGLL+EA+ FIE LP +P + VWQALLGAC ++GD
Sbjct: 481 KSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPMKPDVLVWQALLGACGIHGD 540

Query: 541 SEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGISWIE 600
            EMGKYAAE L    P    PYVLLANIYSS+G WKERA+TI++MKE+ +AKETGISWIE
Sbjct: 541 PEMGKYAAEQLILSAPEKPSPYVLLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIE 600

Query: 601 IDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPIDNAI 660
           I+  +HSF V DKMHPQAEIIYGVL ELF  M+DEGY+PDK++IL Y++ D +   +   
Sbjct: 601 IENNLHSFVVEDKMHPQAEIIYGVLAELFGHMIDEGYVPDKRYILSYVNQDEKGVTNPNN 660

Query: 661 CRQ--------------------------RIEGEDAPLSSAMAAYRLLGVDPTCSESELK 720
           C                            R E ED+PLS++ +AY +LG+ P CS + +K
Sbjct: 661 CHNFPSKTIPLRLFPSLSTSSKFKPHCLGRAE-EDSPLSTS-SAYTVLGIKPGCSAAAIK 720

Query: 721 AAFRAKVKQFHPDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAF 780
           AAFRAKVKQFHPD+N++   SD MIRRVIQAYEMLS++SR E IERECLDPFE PECEAF
Sbjct: 721 AAFRAKVKQFHPDLNKDGKVSDLMIRRVIQAYEMLSNFSRPEIIERECLDPFEEPECEAF 780

Query: 781 DVFVNEFLCVGKACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCI 840
           D+FVNE LCVGK CPYSCV RAP+ FT+ASSTGTARATSQGH EDYQVQ+AVGQCPRSCI
Sbjct: 781 DIFVNEVLCVGKGCPYSCVQRAPYAFTYASSTGTARATSQGHGEDYQVQLAVGQCPRSCI 840

Query: 841 HYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERV 876
           HYVTP QRIILEELLDS L+VPYD SAEADLLYSLI+K++FENNR++KPK++PK ST+ V
Sbjct: 841 HYVTPSQRIILEELLDSILEVPYDCSAEADLLYSLIVKARFENNRFRKPKKQPKTSTKHV 899

BLAST of Lsi11G005470 vs. NCBI nr
Match: gi|568835953|ref|XP_006472016.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Citrus sinensis])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 572/901 (63.49%), Postives = 706/901 (78.36%), Query Frame = 1

Query: 1   MKLKWVFQKLSSQLPSWAASLISPFGNQFHQNPFAEPSSTFVLKHVDPSFLLSVCGREGH 60
           MK KWVFQKL+S  P + +SLISPF  +  Q+P +  S   +  +VD S LLS+  +EGH
Sbjct: 1   MKSKWVFQKLNSNFP-FCSSLISPFITKIIQDPTSSTSKLVLDNYVDISRLLSISAKEGH 60

Query: 61  LHLGSSLHASITKSFE------LSNHDNGVVIMNSLISMYERCGKLPDAVKVFDEMLTRD 120
            HLG SLHAS  K+FE      + N  N  VI NSL+S Y +C ++ +AVK+FD+M  RD
Sbjct: 61  FHLGPSLHASFIKTFESFDNQNVYNVPNATVIWNSLLSFYLKCDQMRNAVKLFDDMPMRD 120

Query: 121 TISWNALIGGFMRNGEFCAGFSYFKAMCLVGDCKFDKATLTTILSACDGLEFCCIIKMVH 180
           T+SWN ++ GF+RNGEF  GF +FK    +G  + D+A+ T ILSACD  E   + KM+H
Sbjct: 121 TVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSACDRPELSLVSKMIH 180

Query: 181 GFAFLSGYDQEITVGNALISSYFKCGCVDLGMQVFYEMGERNVITWTAVISGLAQNGRHE 240
              +L GY++E+TVGNALI+SYFKCG    G +VF EM  RNVITWTAVISGL QN  +E
Sbjct: 181 CLVYLCGYEEEVTVGNALITSYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYE 240

Query: 241 HSLKLFREMMSCGSVEPNSLTYLSLLTACSGLEALEEGCQIHGLILKLGIQSDLCIGSAL 300
             LKLF +M   G + PNSLTYLS + ACSGL+AL EG QIHG++ KLG+QSDLCI SAL
Sbjct: 241 EGLKLFVKMR-LGLINPNSLTYLSSVIACSGLQALCEGRQIHGILWKLGLQSDLCIESAL 300

Query: 301 MDMYSKSGRIGDAWKIFESAEEFDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIKIDE 360
           MDMYSK G + DAW+IFE AEE D VS+TVIL GF  NG EEEA+Q+F+KM+K GI+ID 
Sbjct: 301 MDMYSKCGSVEDAWQIFEFAEELDGVSMTVILVGFAQNGFEEEAMQLFVKMVKAGIEIDP 360

Query: 361 NVVSAVLGVFGADTSLGLGQQVHSFVVKKNFSCNPFVSNGLINMYSKCGALDESVKVFDR 420
           N+VSAVLGVFG DTSLGLG+Q+HS ++K +F+ NPFV+NGLINMYSKCG L++S+KVF R
Sbjct: 361 NMVSAVLGVFGVDTSLGLGKQIHSLIIKSDFTSNPFVNNGLINMYSKCGDLEDSIKVFSR 420

Query: 421 MQERNSVTWNSMIAAFARHGDGLKALQLYENMKLEGAKPTDITFLSLLHACSHVGLLKKG 480
           M  RNSV+WNSMIAAFARHG+G KAL+LYE MKLEG +PTD+TFLSLLHACSHVGL+ KG
Sbjct: 421 MAPRNSVSWNSMIAAFARHGNGFKALELYEEMKLEGVEPTDVTFLSLLHACSHVGLVNKG 480

Query: 481 MEFLESMTKDHGMNPRSEHYACVVDMLGRAGLLSEARNFIEKLPEQPGLHVWQALLGACS 540
           MEFL+SMT+ H ++PR+EHYACVVDMLGRAGLL+EAR+FIE++P +PG+ VWQALLGACS
Sbjct: 481 MEFLKSMTEVHRISPRAEHYACVVDMLGRAGLLNEARSFIERMPVKPGVLVWQALLGACS 540

Query: 541 LYGDSEMGKYAAEHLFSETPHSSVPYVLLANIYSSEGNWKERARTIRKMKEVGMAKETGI 600
           ++GDSEMGKYAAE LF   P S  PY+L+ANIYS  G WKERA+ I++MKE+G+ KETGI
Sbjct: 541 IHGDSEMGKYAAEKLFLAQPDSPAPYILMANIYSCSGRWKERAKAIKRMKEMGVDKETGI 600

Query: 601 SWIEIDKKVHSFTVGDKMHPQAEIIYGVLMELFVLMVDEGYMPDKKFILYYLDDDRRDPI 660
           SWIEI+K+VHSF V DKMHPQA+ I+GVL EL  LM+DEGY+P+K+FIL+ LD   +  I
Sbjct: 601 SWIEIEKQVHSFVVDDKMHPQADTIHGVLAELLRLMIDEGYVPNKRFILHCLDQVDKTVI 660

Query: 661 --------DNAICRQRI-----------EGEDAPL-SSAMAAYRLLGVDPTCSESELKAA 720
                    N+  R+R             GE+A    S  +AY +LGV+P+CS +ELKAA
Sbjct: 661 SPNCHNFPSNSTTRRRFPSKFTVNCTERTGENASTPPSTSSAYAILGVEPSCSAAELKAA 720

Query: 721 FRAKVKQFHPDVNRNENDSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDV 780
           FRAKVKQ+HPDVNR+  DSD++IRR+IQAYE+L+ YSR E IEREC+DPF+ PECEAFDV
Sbjct: 721 FRAKVKQYHPDVNRDGRDSDALIRRIIQAYEILTEYSRLEIIERECIDPFDYPECEAFDV 780

Query: 781 FVNEFLCVGKACPYSCVDRAPHVFTFASSTGTARATSQGHSEDYQVQIAVGQCPRSCIHY 840
           FVNE LCVGK CPYSCV  AP+ F+++SSTGTARA SQGH +DY+VQ+AVGQCPRSCIHY
Sbjct: 781 FVNEVLCVGKGCPYSCVKTAPNAFSYSSSTGTARAISQGHGQDYRVQLAVGQCPRSCIHY 840

Query: 841 VTPLQRIILEELLDSALDVPYDNSAEADLLYSLIMKSKFENNRYKKPKREPKASTERVDW 876
           VTP QRIILEELL+S LD PYD SAEA+LLYSLI+K++FENNRY+KPK++PK S++ VDW
Sbjct: 841 VTPSQRIILEELLESILDAPYDTSAEAELLYSLIVKARFENNRYQKPKKKPKTSSQHVDW 899

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP215_ARATH7.3e-22259.91Pentatricopeptide repeat-containing protein At3g05340 OS=Arabidopsis thaliana GN... [more]
PP373_ARATH8.6e-11436.76Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
PP296_ARATH2.1e-11235.11Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
PP272_ARATH4.9e-10936.50Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP285_ARATH5.4e-10834.38Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LGC8_CUCSA0.0e+0090.85Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022820 PE=4 SV=1[more]
B9RF61_RICCO3.1e-28067.28Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
B9I7R7_POPTR3.5e-24765.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02200g PE=4 SV=2[more]
M5WNH2_PRUPE1.6e-24466.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023606mg PE=4 SV=1[more]
A0A061F359_THECC2.1e-24462.65Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0265... [more]
Match NameE-valueIdentityDescription
AT3G05340.14.1e-22359.91 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G09950.14.9e-11536.76 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G63370.12.1e-11035.30 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49170.12.8e-11036.50 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G57430.13.0e-10934.38 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778666838|ref|XP_011648824.1|0.0e+0088.69PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Cucumis sativu... [more]
gi|659070327|ref|XP_008454568.1|0.0e+0088.80PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Cucumis melo][more]
gi|700205794|gb|KGN60913.1|0.0e+0090.85hypothetical protein Csa_2G022820 [Cucumis sativus][more]
gi|743829857|ref|XP_011023632.1|0.0e+0065.12PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Populus e... [more]
gi|568835953|ref|XP_006472016.1|0.0e+0063.49PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Citrus si... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR001623DnaJ_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G005470.1Lsi11G005470.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 712..732
score: 3.9E-8coord: 677..695
score: 3.9E-8coord: 695..710
score: 3.
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 674..728
score: 2.4
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 676..730
score: 1.7
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 674..732
score: 5.1
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 675..745
score: 13
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 673..737
score: 1.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 85..113
score: 2.4E-5coord: 320..350
score: 0.0014coord: 292..316
score: 0.18coord: 116..141
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 216..263
score: 9.1E-11coord: 419..466
score: 1.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 218..252
score: 3.7E-8coord: 321..354
score: 2.2E-4coord: 190..216
score: 7.8E-4coord: 421..454
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 83..117
score: 9.405coord: 388..418
score: 9.536coord: 287..317
score: 7.3coord: 252..286
score: 7.278coord: 185..215
score: 7.476coord: 490..520
score: 6.566coord: 216..250
score: 11.213coord: 419..453
score: 12.419coord: 556..590
score: 7.574coord: 454..489
score: 7.805coord: 318..352
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 385..463
score: 2.3E-11coord: 214..348
score: 2.3E-11coord: 83..114
score: 2.3E-11coord: 554..585
score: 2.3
NoneNo IPR availableGENE3DG3DSA:3.30.70.20coord: 753..815
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 3..31
score: 0.0coord: 64..597
score:
NoneNo IPR availablePANTHERPTHR24015:SF563SUBFAMILY NOT NAMEDcoord: 3..31
score: 0.0coord: 64..597
score:
NoneNo IPR availablePFAMPF13459Fer4_15coord: 754..813
score: 5.