Lsi11G005330 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G005330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Nucleolar GTPase
Location	chr11 : 5612115 .. 5614727 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAATATTGCAAGTTGCAAATTAGCTGACCAGTTCATGTCTGCCATTCTTTCAGGAAAACGATATGTCTGCGCCCTCGGAGAGATTTATAGGGTAGTTCAAGTGCTTAGAGCCTCAGTTGTACTTTACAAGCCATGGATACTGTTAGGTCGGGTTGATCCCAGTGACTTGATTTCTCTTCTGAATGAGTGCTCCGATATTTGGTTGAGTTCAGGACTCGTTGGAGCTCTCTGCAAGATAGATGGTCCTATTGATTGCAAAGCATTATTGGATTCTATCAATGTTATTCAGAATCTTGATGAATGGGGTTTGAGAAAGCATGTTCTCTTGGGACAACAACCTACTTGTAATCTATCGCTCTTAAGTGCTGAATCAATTCCAGGTATGCACTGATTCTATTATACTTTCTTTTTCCAAGCTAGGAACTTAGACTTCATTAGAACCGAAGATTACCAAGGAAGAGAGGGTGAGTCATCAAACCACTCACAGATGAAAGAGCTTACAGAGAACGTACTCCCATGTGCTTGAATACACACATATATAGAAGTAAAAATGGAAATGAAAAGAAAAAAAGACAATTACAAATGAACTTCAAGAGTATACCAAAAGAACCCCAAAAAACTAACAAGATTCCAAATTTCCAATTAAATGTTACAATTATCATTGAAGATCTAAGATTTCTTTCCTTTCAAAACTCCCAAAGAATAGCTTTAACAGTGTTCATCCTCATCCATATCATCTTTGCTTTTCTCTTAAAAAGATGACCACATAATAACAGCTGGTTATGTTTTCCATAAAGTTTGGAGAAAAGCACCAGCTTAACCCAAACTCCTTTGCAGCCTGCCCATCTCTCTTAGGCAATCTGCCGCTCCACTAACGTCTTCCTTCTGCATACAACACACCCACTAGCTCGAAGGGGGTAGTTTTTTCCTCTTCTGCTCTCTTTTGAATGACTTCCACTCTACATTATATTGCAATATCAAGAGAGATTACAATATTCAATAGCCTTCTGAGAGGGTTCCACAATGGACAATCCCACCAAAATGATCCTCCTCCAAAAACTCTAATACTCTATATTTAAATCCAGGTTTTTTTTACCTAATTACCACTATACCCTTACTATCCTATTACTATTCCCAAGATAGCCCCCATTAGTACCTTCACAAAAGACTCTGCCAAACAATCTCCACGTAGCAGTTGGCTTTCGTGGAAAAGTGAACTAAGTGGAAATCACCAGGAAAGTTGTGGATGAGCTAAGAATAAAGGAGAGAAGCTTGGCTTTCTAAAAAAGCATATGATAAGGTTTTCCGAATTTCCTTCAGAATGATAGTAAGCCTTTCGGTAAAGAGAAAAGAAAGTATTAGCTATCAAACCCAACGGAGAACGGGTTCAGGAAACCTAAGGTTAAAGAATGCCGTGATGATTACCAAATGGATTTGGCAGTCTGTTGATGGAAAACTTCTTGCGGCAAAAGCAACTAGGTAATTCCAAGCAAAGCAAGCATGGCAAAGATCGTCTTTAGTAGGTTTACTCTGAAGCAGTCATAATAACATGACGTGGATCATTCTAGTAACGAGGTTGGAGTTCCATCTTAGTGTTGTGAAGCATAAGTTCGAAATTTACTTTAACTTTTATGGATTTGTTGGGATTTCATAATAACCACAGCAACCAGATTATGGGTTACGTATGTTTGGGTTTGATGACTCTGAAAACTGTGACTCTTCCAGTTTTGTGCACCAACGATGTCTGGCCATCAGATTATCGCATTTAATTGATTAACTAAACAACCCCCCACCTCTCCCACATTGAAAAATAAATATTTGGAATTCTGGCAATCAAATACTATTCCCATGTCTATCTATATGCCCCCTTTGTAAAATTCATTTATACAGTTCCATCTTCCTGAGATTTTTGTTTGGCGTTAGGTATGGATTTGGTGGTCTGGAATGGGGAGAACTACTTTTTAAAGCTCGCAAACTTATGGGCAAATCTAATAGGTCGTGATCCTCCATTCATTCAGCACTCGAATAATAGGTGATAAGAGGATCGATCCATATTGTTTTGTATAATAGTCTGGATGATGTAGCTGTCGCTTTTTTCTCCAAACAAGGTTTCATCAGCTCTCGTCCCAGCTGCTCATCCATGTCGATGTTTGATACGAAATGCTAGATGATTTCACTTCTTGAGATGAAATTAAGAAAGGAGAACACTTTCTGGGTTTTCAAGAAGATCAAATAAATTGATCTAGGTCTCTTGGGATCCAGTTTCCAACACATACACCACCATTCTTTAGGAGAGCTACTGCTTAGCAACTCAACGATGTTTCATATCTGTATCATATTATGATTTATGCTGTCCAGAACTGGATGGATTCATACATAGAGAGAATTTCATCATGTTGAAGATCATTTTTGTTTCAATATATATAACATCTTTTTAATCCTTTTGGTTCCTGTTTAAATTTTATGTTTCTAGTTCAGAGTCCCAGAATCAGAACAAGATCTGTTTACCAGAGATGAACATTGTACACTGTATATATAGTTTTTTCCAGAATCATTGTGGTATTTATTGTATGTGAAGGTAATTTATTTCATTTTTTCCCATTGTTTT

mRNA sequence

ATGGATAATATTGCAAGTTGCAAATTAGCTGACCAGTTCATGTCTGCCATTCTTTCAGGAAAACGATATGTCTGCGCCCTCGGAGAGATTTATAGGGTAGTTCAAGTGCTTAGAGCCTCAGTTGTACTTTACAAGCCATGGATACTGTTAGGTCGGGTTGATCCCAGTGACTTGATTTCTCTTCTGAATGAGTGCTCCGATATTTGGTTGAGTTCAGGACTCGTTGGAGCTCTCTGCAAGATAGATGGTCCTATTGATTGCAAAGCATTATTGGATTCTATCAATGTTATTCAGAATCTTGATGAATGGGGTATGGATTTGGTGGTCTGGAATGGGGAGAACTACTTTTTAAAGCTCGCAAACTTATGGGCAAATCTAATAGGTCGTGATCCTCCATTCATTCAGCACTCGAATAATAGGTGATAAGAGGATCGATCCATATTGTTTTGTATAATAGTCTGGATGATGTAGCTGTCGCTTTTTTCTCCAAACAAGGTTTCATCAGCTCTCGTCCCAGCTGCTCATCCATGTCGATGTTTGATACGAAATGCTAGATGATTTCACTTCTTGAGATGAAATTAAGAAAGGAGAACACTTTCTGGGTTTTCAAGAAGATCAAATAAATTGATCTAGGTCTCTTGGGATCCAGTTTCCAACACATACACCACCATTCTTTAGGAGAGCTACTGCTTAGCAACTCAACGATGTTTCATATCTGTATCATATTATGATTTATGCTGTCCAGAACTGGATGGATTCATACATAGAGAGAATTTCATCATGTTGAAGATCATTTTTGTTTCAATATATATAACATCTTTTTAATCCTTTTGGTTCCTGTTTAAATTTTATGTTTCTAGTTCAGAGTCCCAGAATCAGAACAAGATCTGTTTACCAGAGATGAACATTGTACACTGTATATATAGTTTTTTCCAGAATCATTGTGGTATTTATTGTATGTGAAGGTAATTTATTTCATTTTTTCCCATTGTTTT

Coding sequence (CDS)

ATGGATAATATTGCAAGTTGCAAATTAGCTGACCAGTTCATGTCTGCCATTCTTTCAGGAAAACGATATGTCTGCGCCCTCGGAGAGATTTATAGGGTAGTTCAAGTGCTTAGAGCCTCAGTTGTACTTTACAAGCCATGGATACTGTTAGGTCGGGTTGATCCCAGTGACTTGATTTCTCTTCTGAATGAGTGCTCCGATATTTGGTTGAGTTCAGGACTCGTTGGAGCTCTCTGCAAGATAGATGGTCCTATTGATTGCAAAGCATTATTGGATTCTATCAATGTTATTCAGAATCTTGATGAATGGGGTATGGATTTGGTGGTCTGGAATGGGGAGAACTACTTTTTAAAGCTCGCAAACTTATGGGCAAATCTAATAGGTCGTGATCCTCCATTCATTCAGCACTCGAATAATAGGTGA

Protein sequence

MDNIASCKLADQFMSAILSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEWGMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNNR

Homology

[Close]

BLAST of Lsi11G005330 vs. TrEMBL
Match: A0A0A0LJK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021680 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 781 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 840

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 841 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 900

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 901 YFLKLANLWANLIGRDPPIIQHSSNR 926

[Close]

BLAST of Lsi11G005330 vs. TrEMBL
Match: A6YTC8_CUCME (Nucleolar GTPase OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.8e-52
Identity = 106/146 (72.60%), Postives = 113/146 (77.40%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRVVQVLRAS VLYKPWILLG+VDP++LISL NECS+IWLSSGLV ALC
Sbjct: 789 GKQYICALGEIYRVVQVLRASFVLYKPWILLGQVDPNNLISLANECSNIWLSSGLVVALC 848

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 849 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLLGQQPTCNLSLLSAESIPGMDLVVWNGEN 908

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQ+  NR
Sbjct: 909 YFLKLANLWANLIGRDPPIIQYLINR 934

[Close]

BLAST of Lsi11G005330 vs. TrEMBL
Match: B9H5Q6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s03700g PE=4 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24
Identity = 69/157 (43.95%), Postives = 86/157 (54.78%), Query Frame = 1


Query: 11   DQFMSAILSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWL 70
            DQ +S    GK Y+ ALGEIYRV++V+ +S  LYKPW+L+   DP  L +LL+ECS +W 
Sbjct: 846  DQILSKP-QGKNYIVALGEIYRVIEVIGSSARLYKPWVLVSSTDPMGLFTLLSECSTLWS 905

Query: 71   SSGLVGALCKIDGP--IDCK----ALLDSINVIQNLDEW--------------------- 130
             SGL  AL  I  P   DC      L++SI  I NLD                       
Sbjct: 906  GSGLEEALQSISDPSGADCNRDLTTLIESIKNIHNLDTLTLYNHVFCGQGPICRLSVLAA 965

Query: 131  ----GMDLVVWNGENYFLKLANLWANLIGRDPPFIQH 137
                GM +VVWNGE+YFL LANLWANL+  +PP   H
Sbjct: 966  GAVPGMKMVVWNGEHYFLPLANLWANLVSCNPPNFPH 1001

[Close]

BLAST of Lsi11G005330 vs. TrEMBL
Match: A0A061F2S7_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026571 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.8e-24
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           G++Y+ ALGEIYRVV+++ +S  LYKPWI+     P++++SL+ ECS +W SSGL  AL 
Sbjct: 791 GRQYILALGEIYRVVKIVESSTKLYKPWIMFSSEHPTNILSLVRECSTLWSSSGLEEALQ 850

Query: 80  KIDGPIDCK----ALLDSINVIQNLDEW-------------------------GMDLVVW 137
            +  P D K    ALL SI  I +LD                           GM +VVW
Sbjct: 851 SLSDPTDLKYDIEALLGSIQSIHDLDAHELYKQVFSGQESTCCLSGLGAGSVPGMKMVVW 910

[Close]

BLAST of Lsi11G005330 vs. TrEMBL
Match: A0A151U4Z9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_007019 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23
Identity = 68/153 (44.44%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 11  DQFMSAILSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWL 70
           DQ +S    G +Y+ ALGEIYRV +++ AS  LYKPW+L G +DP  L +LLNEC  IWL
Sbjct: 654 DQILSN-RKGVQYILALGEIYRVAEIIGASAKLYKPWMLSGSLDPKSLCALLNECYSIWL 713

Query: 71  SSGLVGALCKIDG-----PID-CKALLDSINVIQNLDEW--------------------- 130
            SGL  AL  I       P D  + L++SI  I  LDE                      
Sbjct: 714 DSGLEEALLSISNQNNIEPDDISRELVESIKYIHELDEHALQSYVISGEQTTCQLSALSA 773

Query: 131 ----GMDLVVWNGENYFLKLANLWANLIGRDPP 133
               G +LV WNG++YF+KLANLW NLI  DPP
Sbjct: 774 GFIPGFNLVSWNGKHYFVKLANLWINLISSDPP 805

[Close]

BLAST of Lsi11G005330 vs. TAIR10
Match: AT1G54920.3 (AT1G54920.3 unknown protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 61/138 (44.20%), Postives = 78/138 (56.52%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK Y  ++GEIYRVV++LRAS  LYKPWILL     S+++++L+EC  +WLSSGLV AL 
Sbjct: 755 GKSYALSVGEIYRVVKILRASTRLYKPWILLAPTS-SNVLAVLDECLKLWLSSGLVEALL 814

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 133
                     LL+SI  I  +D +                         G+  V WNGE+
Sbjct: 815 NSHDD-SADQLLESIKYINEVDAFTLYTCITSATSPTCYISGLNTDIVPGIKTVEWNGEH 874

[Close]

BLAST of Lsi11G005330 vs. NCBI nr
Match: gi|778666776|ref|XP_011648807.1| (PREDICTED: uncharacterized protein LOC101210593 isoform X1 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 815 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 874

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 875 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 934

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 935 YFLKLANLWANLIGRDPPIIQHSSNR 960

[Close]

BLAST of Lsi11G005330 vs. NCBI nr
Match: gi|700205778|gb|KGN60897.1| (hypothetical protein Csa_2G021680 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 781 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 840

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 841 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 900

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 901 YFLKLANLWANLIGRDPPIIQHSSNR 926

[Close]

BLAST of Lsi11G005330 vs. NCBI nr
Match: gi|778666779|ref|XP_011648808.1| (PREDICTED: uncharacterized protein LOC101210593 isoform X2 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 814 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 873

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 874 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 933

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 934 YFLKLANLWANLIGRDPPIIQHSSNR 959

[Close]

BLAST of Lsi11G005330 vs. NCBI nr
Match: gi|778666782|ref|XP_011648809.1| (PREDICTED: uncharacterized protein LOC101210593 isoform X3 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 793 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 852

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 853 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 912

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 913 YFLKLANLWANLIGRDPPIIQHSSNR 938

[Close]

BLAST of Lsi11G005330 vs. NCBI nr
Match: gi|778666785|ref|XP_004139183.2| (PREDICTED: uncharacterized protein LOC101210593 isoform X4 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 108/146 (73.97%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 20  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALC 79
           GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALC
Sbjct: 792 GKQYICALGEIYRVAQVLRASFVLYKPWVLLGQVDPSGLISLVNECSNIWLSSGLVGALC 851

Query: 80  KIDGPIDCKALLDSINVIQNLDEW-------------------------GMDLVVWNGEN 139
           KIDGPIDCKALLDSIN I NLDEW                         GMDLVVWNGEN
Sbjct: 852 KIDGPIDCKALLDSINAIDNLDEWGLRKHVLFRQQPICNLSLLSAESIPGMDLVVWNGEN 911

Query: 140 YFLKLANLWANLIGRDPPFIQHSNNR 141
           YFLKLANLWANLIGRDPP IQHS+NR
Sbjct: 912 YFLKLANLWANLIGRDPPIIQHSSNR 937

The following BLAST results are available for this feature:

BLAST of Lsi11G005330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G005330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJK9_CUCSA	1.5e-54	73.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021680 PE=4 SV=1	[more]
A6YTC8_CUCME	6.8e-52	72.60	Nucleolar GTPase OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
B9H5Q6_POPTR	1.6e-24	43.95	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s03700g PE=4 SV=2	[more]
A0A061F2S7_THECC	7.8e-24	41.78	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026571 PE=4 SV=1	[more]
A0A151U4Z9_CAJCA	3.9e-23	44.44	Uncharacterized protein OS=Cajanus cajan GN=KK1_007019 PE=4 SV=1	[more]

BLAST of Lsi11G005330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54920.3	1.2e-23	44.20	unknown protein	[more]

BLAST of Lsi11G005330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666776\|ref\|XP_011648807.1\|	2.1e-54	73.97	PREDICTED: uncharacterized protein LOC101210593 isoform X1 [Cucumis sativus]	[more]
gi\|700205778\|gb\|KGN60897.1\|	2.1e-54	73.97	hypothetical protein Csa_2G021680 [Cucumis sativus]	[more]
gi\|778666779\|ref\|XP_011648808.1\|	2.1e-54	73.97	PREDICTED: uncharacterized protein LOC101210593 isoform X2 [Cucumis sativus]	[more]
gi\|778666782\|ref\|XP_011648809.1\|	2.1e-54	73.97	PREDICTED: uncharacterized protein LOC101210593 isoform X3 [Cucumis sativus]	[more]
gi\|778666785\|ref\|XP_004139183.2\|	2.1e-54	73.97	PREDICTED: uncharacterized protein LOC101210593 isoform X4 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G005330.1	Lsi11G005330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35701	FAMILY NOT NAMED	coord: 9..140 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G005330	Csa2G021680	Cucumber (Chinese Long) v2	culsiB098
Lsi11G005330	CSPI02G03860	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G005330	Cucsa.091560	Cucumber (Gy14) v1	cgylsiB100
Lsi11G005330	CmaCh12G010770	Cucurbita maxima (Rimu)	cmalsiB159
Lsi11G005330	CmaCh05G011450	Cucurbita maxima (Rimu)	cmalsiB715
Lsi11G005330	CmoCh05G011560	Cucurbita moschata (Rifu)	cmolsiB706
Lsi11G005330	CmoCh12G010930	Cucurbita moschata (Rifu)	cmolsiB148
Lsi11G005330	Cla019883	Watermelon (97103) v1	lsiwmB107
Lsi11G005330	MELO3C004275	Melon (DHL92) v3.5.1	lsimeB115
Lsi11G005330	ClCG02G015880	Watermelon (Charleston Gray)	lsiwcgB098
Lsi11G005330	MELO3C004275.2	Melon (DHL92) v3.6.1	lsimedB123
Lsi11G005330	Cla97C02G041630	Watermelon (97103) v2	lsiwmbB087
Lsi11G005330	Bhi05G001649	Wax gourd	lsiwgoB120
Lsi11G005330	Cp4.1LG07g09130	Cucurbita pepo (Zucchini)	cpelsiB659
Lsi11G005330	Cp4.1LG11g09440	Cucurbita pepo (Zucchini)	cpelsiB074
Lsi11G005330	CsGy2G003930	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G005330	Carg17549	Silver-seed gourd	carlsiB654
Lsi11G005330	Carg12897	Silver-seed gourd	carlsiB822
Lsi11G005330	CsaV3_2G005180	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None