Lsi11G004960 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G004960
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNucleotide-binding site leucine-rich repeat protein
Locationchr11 : 5245101 .. 5245526 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAAGTATCCTAGTTTTGTTGGATGATGTCTGGGATTATATTAATTTGGAAACAATAGGAATTCCAAGTGTTGAAGATCACACAGGATGCAAAATCTTGTTTACCTCTAGAGATACACATTTGTTCGCAAATGAAATCTATGTCGATAAAATCTTTGAGATAAAAGTTTTAGGAGAAGATGAGTCGTGGAATTTATTTGAGGCAATAATGGCAGGTAAAATAATTGATGAAGCATGTGATCTGACGCCTATAGCTATTCAAATTGTGAGAGAATGTGGAGGTTTGCCTATTGCTATCACTACTGTTGCTAAGGCATTACAAAATAAACCATCCGCCATTTGGAAGGATGCCTTGGATCAACTAAGAAGGGATGATGTGGTTATGTCGAACATTAGAGGAATGAACAAGAAAGTGTATTGA

mRNA sequence

ATGGAGAAAAGTATCCTAGTTTTGTTGGATGATGTCTGGGATTATATTAATTTGGAAACAATAGGAATTCCAAGTGTTGAAGATCACACAGGATGCAAAATCTTGTTTACCTCTAGAGATACACATTTGTTCGCAAATGAAATCTATGTCGATAAAATCTTTGAGATAAAAGTTTTAGGAGAAGATGAGTCGTGGAATTTATTTGAGGCAATAATGGCAGGTAAAATAATTGATGAAGCATGTGATCTGACGCCTATAGCTATTCAAATTGTGAGAGAATGTGGAGGTTTGCCTATTGCTATCACTACTGTTGCTAAGGCATTACAAAATAAACCATCCGCCATTTGGAAGGATGCCTTGGATCAACTAAGAAGGGATGATGTGGTTATGTCGAACATTAGAGGAATGAACAAGAAAGTGTATTGA

Coding sequence (CDS)

ATGGAGAAAAGTATCCTAGTTTTGTTGGATGATGTCTGGGATTATATTAATTTGGAAACAATAGGAATTCCAAGTGTTGAAGATCACACAGGATGCAAAATCTTGTTTACCTCTAGAGATACACATTTGTTCGCAAATGAAATCTATGTCGATAAAATCTTTGAGATAAAAGTTTTAGGAGAAGATGAGTCGTGGAATTTATTTGAGGCAATAATGGCAGGTAAAATAATTGATGAAGCATGTGATCTGACGCCTATAGCTATTCAAATTGTGAGAGAATGTGGAGGTTTGCCTATTGCTATCACTACTGTTGCTAAGGCATTACAAAATAAACCATCCGCCATTTGGAAGGATGCCTTGGATCAACTAAGAAGGGATGATGTGGTTATGTCGAACATTAGAGGAATGAACAAGAAAGTGTATTGA

Protein sequence

MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
Homology
[Close]
BLAST of Lsi11G004960 vs. Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = 1 

Query: 3   KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGED 62
           +  ++LLDD+W+ +NL+ +G+P      GCK+ FT+R   +    + VD   E+  L  +
Sbjct: 258 RKFVLLLDDIWEKVNLKAVGVPYPSKDNGCKVAFTTRSRDV-CGRMGVDDPMEVSCLQPE 317

Query: 63  ESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDALD 122
           ESW+LF+  +    +    D+  +A ++ R+C GLP+A+  + +A+  K +   W  A+D
Sbjct: 318 ESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAID 377

Query: 123 QLRRDDVVMSNI 134
            L    +  S +
Sbjct: 378 VLTSSAIDFSGM 388

[Close]
BLAST of Lsi11G004960 vs. Swiss-Prot
Match: DRL17_ARATH (Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g61300 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-14
Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 1 

Query: 3   KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGED 62
           K  +++LDD+W+ ++LE IG+P   +   CK+ FT+RD  +   E+   K  ++K L  +
Sbjct: 143 KRFVLMLDDIWEKVDLEAIGVPYPSEVNKCKVAFTTRDQKV-CGEMGDHKPMQVKCLEPE 202

Query: 63  ESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLPIAITTVAKALQNKPSA-IWK 122
           ++W LF+     K+ D      P+ +++ RE    C GLP+A++ + + + +K     W+
Sbjct: 203 DAWELFK----NKVGDNTLRSDPVIVELAREVAQKCRGLPLALSVIGETMASKTMVQEWE 262

Query: 123 DALDQLRRDDVVMSNI 134
            A+D L R     SN+
Sbjct: 263 HAIDVLTRSAAEFSNM 273

[Close]
BLAST of Lsi11G004960 vs. Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 36/123 (29.27%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           ++  ++LLDD+W+ +NLE +G+P      GCK++FT+R   +    + VD   E+  L  
Sbjct: 257 KQKFVLLLDDIWEKVNLEVLGVPYPSRQNGCKVVFTTRSRDV-CGRMRVDDPMEVSCLEP 316

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDAL 121
           +E+W LF+  +    +    D+  +A ++  +C GLP+A+  + + +  K     W++A+
Sbjct: 317 NEAWELFQMKVGENTLKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAI 376

Query: 122 DQL 124
           D L
Sbjct: 377 DVL 378

[Close]
BLAST of Lsi11G004960 vs. Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           E+  L++LDDVW  I+L+ +GIP  E++ G K++ TSR   +    +  D    +  L E
Sbjct: 246 ERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEV-CRSMKTDLDVRVDCLLE 305

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDAL 121
           +++W LF    AG ++  +  +  IA  + +ECGGLP+AI TV  A++ K +  +W   L
Sbjct: 306 EDAWELF-CKNAGDVV-RSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVL 365

Query: 122 DQLRRDDVVMSNIRGMNKKVY 142
            +L +    +  I+ + +K++
Sbjct: 366 SKLSKS---VPWIKSIEEKIF 380

[Close]
BLAST of Lsi11G004960 vs. Swiss-Prot
Match: DRL2_ARATH (Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-13
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           +K  ++LLDD+W  + L  IGIP+     GCKI FT+R   + A+ + V    E++ LG 
Sbjct: 256 KKRFVLLLDDIWKRVELTEIGIPNPTSENGCKIAFTTRCQSVCAS-MGVHDPMEVRCLGA 315

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQ-NKPSAIWKDAL 121
           D++W+LF+  +    +    D+  IA ++ + C GLP+A+  + + +   K +  W  A+
Sbjct: 316 DDAWDLFKKKVGDITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQEWDRAV 375

[Close]
BLAST of Lsi11G004960 vs. TrEMBL
Match: A0A0A0LMT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403680 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-51
Identity = 105/141 (74.47%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+ ILV+LDD+W+YI+LETIGIPSVEDHTGCKILFTSR+ HL +N++  ++IFEIKVLG
Sbjct: 248 MERRILVVLDDIWEYIDLETIGIPSVEDHTGCKILFTSRNKHLISNQMCANQIFEIKVLG 307

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           E+ESWNLF+A MAGKI+ EA DL PIAIQ+VREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 308 ENESWNLFKA-MAGKIV-EASDLKPIAIQVVRECAGLPIAITTVAKALRNKPSDIWNDAL 367

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M+KKVY
Sbjct: 368 DQLKSVDVFMTNIGEMDKKVY 386

[Close]
BLAST of Lsi11G004960 vs. TrEMBL
Match: A0A097NYW9_CUCME (Vat-like protein OS=Cucumis melo PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.9e-51
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG
Sbjct: 249 MERSILVVLDDVWEYIDLETIGIPSVEDHTGCKILFTTRIKHLISNQMCANKIFEIKVLG 308

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           +DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 309 KDESWNLFKA-MAGDIVD-ASDLKPIAIRIVRECAGLPIAITTVAKALRNKPSDIWNDAL 368

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M KKVY
Sbjct: 369 DQLKSVDVGMANIGEMEKKVY 387

[Close]
BLAST of Lsi11G004960 vs. TrEMBL
Match: A0A097NYY2_CUCME (Vat protein OS=Cucumis melo PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.9e-51
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG
Sbjct: 249 MERSILVVLDDVWEYIDLETIGIPSVEDHTGCKILFTTRIKHLISNQMCANKIFEIKVLG 308

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           +DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 309 KDESWNLFKA-MAGDIVD-ASDLKPIAIRIVRECAGLPIAITTVAKALRNKPSDIWNDAL 368

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M KKVY
Sbjct: 369 DQLKTVDVGMANIGEMEKKVY 387

[Close]
BLAST of Lsi11G004960 vs. TrEMBL
Match: A0A0A0LLJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G014830 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTG-CKILFTSRDTHLFANEIYVDKIFEIKVLG 61
           E+SILV+LDDVW+YI+LETIGIPSVEDH G CKILFTSR+  L +N++  +KIFEIKVLG
Sbjct: 251 ERSILVVLDDVWEYIDLETIGIPSVEDHKGICKILFTSRNKQLISNDMGANKIFEIKVLG 310

Query: 62  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 121
           EDESWNLF+A MAG+I+ EA DL PIAIQI+REC GLPIAITTVAKAL NKPS IW DAL
Sbjct: 311 EDESWNLFKA-MAGEIV-EATDLKPIAIQIMRECAGLPIAITTVAKALLNKPSDIWNDAL 370

Query: 122 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M+KKVY
Sbjct: 371 DQLKSVDVGMANIGEMDKKVY 389

[Close]
BLAST of Lsi11G004960 vs. TrEMBL
Match: A0A0A0LN08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G096930 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.6e-38
Identity = 86/139 (61.87%), Postives = 106/139 (76.26%), Query Frame = 1 

Query: 3   KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGED 62
           + IL++LDDVW  I+LE IGIPS+EDH+GCKILFTSRD  +  N+    K FEIK L ED
Sbjct: 249 QKILIVLDDVWKQIDLEKIGIPSIEDHSGCKILFTSRDNDVLFNDWRTYKNFEIKFLQED 308

Query: 63  ESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDALDQ 122
           E+WNLF   MAG+I+ E  D   IA++IVREC  LPIAITT+A+AL+NKP++IWKDAL Q
Sbjct: 309 ETWNLFRK-MAGEIV-ETSDFKSIAVEIVRECAHLPIAITTIARALRNKPASIWKDALIQ 368

Query: 123 LRRDDVVMSNIRGMNKKVY 142
           LR  + V  NIR +NKKVY
Sbjct: 369 LR--NPVFVNIREINKKVY 383

[Close]
BLAST of Lsi11G004960 vs. TAIR10
Match: AT1G12220.1 (AT1G12220.1 Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 80.9 bits (198), Expect = 7.0e-16
Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = 1 

Query: 3   KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGED 62
           +  ++LLDD+W+ +NL+ +G+P      GCK+ FT+R   +    + VD   E+  L  +
Sbjct: 258 RKFVLLLDDIWEKVNLKAVGVPYPSKDNGCKVAFTTRSRDV-CGRMGVDDPMEVSCLQPE 317

Query: 63  ESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDALD 122
           ESW+LF+  +    +    D+  +A ++ R+C GLP+A+  + +A+  K +   W  A+D
Sbjct: 318 ESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAID 377

Query: 123 QLRRDDVVMSNI 134
            L    +  S +
Sbjct: 378 VLTSSAIDFSGM 388

[Close]
BLAST of Lsi11G004960 vs. TAIR10
Match: AT1G61300.1 (AT1G61300.1 LRR and NB-ARC domains-containing disease resistance protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15
Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 1 

Query: 3   KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGED 62
           K  +++LDD+W+ ++LE IG+P   +   CK+ FT+RD  +   E+   K  ++K L  +
Sbjct: 143 KRFVLMLDDIWEKVDLEAIGVPYPSEVNKCKVAFTTRDQKV-CGEMGDHKPMQVKCLEPE 202

Query: 63  ESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLPIAITTVAKALQNKPSA-IWK 122
           ++W LF+     K+ D      P+ +++ RE    C GLP+A++ + + + +K     W+
Sbjct: 203 DAWELFK----NKVGDNTLRSDPVIVELAREVAQKCRGLPLALSVIGETMASKTMVQEWE 262

Query: 123 DALDQLRRDDVVMSNI 134
            A+D L R     SN+
Sbjct: 263 HAIDVLTRSAAEFSNM 273

[Close]
BLAST of Lsi11G004960 vs. TAIR10
Match: AT1G12280.1 (AT1G12280.1 LRR and NB-ARC domains-containing disease resistance protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 36/123 (29.27%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           ++  ++LLDD+W+ +NLE +G+P      GCK++FT+R   +    + VD   E+  L  
Sbjct: 257 KQKFVLLLDDIWEKVNLEVLGVPYPSRQNGCKVVFTTRSRDV-CGRMRVDDPMEVSCLEP 316

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDAL 121
           +E+W LF+  +    +    D+  +A ++  +C GLP+A+  + + +  K     W++A+
Sbjct: 317 NEAWELFQMKVGENTLKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAI 376

Query: 122 DQL 124
           D L
Sbjct: 377 DVL 378

[Close]
BLAST of Lsi11G004960 vs. TAIR10
Match: AT4G27190.1 (AT4G27190.1 NB-ARC domain-containing disease resistance protein)

HSP 1 Score: 77.4 bits (189), Expect = 7.8e-15
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           E+  L++LDDVW  I+L+ +GIP  E++ G K++ TSR   +    +  D    +  L E
Sbjct: 246 ERKFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEV-CRSMKTDLDVRVDCLLE 305

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSA-IWKDAL 121
           +++W LF    AG ++  +  +  IA  + +ECGGLP+AI TV  A++ K +  +W   L
Sbjct: 306 EDAWELF-CKNAGDVV-RSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVL 365

Query: 122 DQLRRDDVVMSNIRGMNKKVY 142
            +L +    +  I+ + +K++
Sbjct: 366 SKLSKS---VPWIKSIEEKIF 380

[Close]
BLAST of Lsi11G004960 vs. TAIR10
Match: AT1G12290.1 (AT1G12290.1 Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-14
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 1 

Query: 2   EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGE 61
           +K  ++LLDD+W  + L  IGIP+     GCKI FT+R   + A+ + V    E++ LG 
Sbjct: 256 KKRFVLLLDDIWKRVELTEIGIPNPTSENGCKIAFTTRCQSVCAS-MGVHDPMEVRCLGA 315

Query: 62  DESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQ-NKPSAIWKDAL 121
           D++W+LF+  +    +    D+  IA ++ + C GLP+A+  + + +   K +  W  A+
Sbjct: 316 DDAWDLFKKKVGDITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQEWDRAV 375

[Close]
BLAST of Lsi11G004960 vs. NCBI nr
Match: gi|778674416|ref|XP_011650207.1| (PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51
Identity = 105/141 (74.47%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+ ILV+LDD+W+YI+LETIGIPSVEDHTGCKILFTSR+ HL +N++  ++IFEIKVLG
Sbjct: 248 MERRILVVLDDIWEYIDLETIGIPSVEDHTGCKILFTSRNKHLISNQMCANQIFEIKVLG 307

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           E+ESWNLF+A MAGKI+ EA DL PIAIQ+VREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 308 ENESWNLFKA-MAGKIV-EASDLKPIAIQVVRECAGLPIAITTVAKALRNKPSDIWNDAL 367

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M+KKVY
Sbjct: 368 DQLKSVDVFMTNIGEMDKKVY 386

[Close]
BLAST of Lsi11G004960 vs. NCBI nr
Match: gi|700207994|gb|KGN63113.1| (hypothetical protein Csa_2G403680 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51
Identity = 105/141 (74.47%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+ ILV+LDD+W+YI+LETIGIPSVEDHTGCKILFTSR+ HL +N++  ++IFEIKVLG
Sbjct: 248 MERRILVVLDDIWEYIDLETIGIPSVEDHTGCKILFTSRNKHLISNQMCANQIFEIKVLG 307

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           E+ESWNLF+A MAGKI+ EA DL PIAIQ+VREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 308 ENESWNLFKA-MAGKIV-EASDLKPIAIQVVRECAGLPIAITTVAKALRNKPSDIWNDAL 367

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M+KKVY
Sbjct: 368 DQLKSVDVFMTNIGEMDKKVY 386

[Close]
BLAST of Lsi11G004960 vs. NCBI nr
Match: gi|699009313|gb|AIU36098.1| (vat protein [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG
Sbjct: 249 MERSILVVLDDVWEYIDLETIGIPSVEDHTGCKILFTTRIKHLISNQMCANKIFEIKVLG 308

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           +DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 309 KDESWNLFKA-MAGDIVD-ASDLKPIAIRIVRECAGLPIAITTVAKALRNKPSDIWNDAL 368

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M KKVY
Sbjct: 369 DQLKTVDVGMANIGEMEKKVY 387

[Close]
BLAST of Lsi11G004960 vs. NCBI nr
Match: gi|699009315|gb|AIU36099.1| (vat-like protein [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG
Sbjct: 249 MERSILVVLDDVWEYIDLETIGIPSVEDHTGCKILFTTRIKHLISNQMCANKIFEIKVLG 308

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           +DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIAITTVAKAL+NKPS IW DAL
Sbjct: 309 KDESWNLFKA-MAGDIVD-ASDLKPIAIRIVRECAGLPIAITTVAKALRNKPSDIWNDAL 368

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M KKVY
Sbjct: 369 DQLKSVDVGMANIGEMEKKVY 387

[Close]
BLAST of Lsi11G004960 vs. NCBI nr
Match: gi|659070479|ref|XP_008455306.1| (PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 3.2e-50
Identity = 104/141 (73.76%), Postives = 121/141 (85.82%), Query Frame = 1 

Query: 1   MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLG 60
           ME+SILV+LDD+W+YI+LE IGIPSVEDH GCKILFTSR+ HL +NE+  +K FEIKVLG
Sbjct: 249 MERSILVVLDDIWEYIDLEIIGIPSVEDHAGCKILFTSRNKHLISNEMCANKFFEIKVLG 308

Query: 61  EDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQNKPSAIWKDAL 120
           EDESWNLF+A MAG+I+ EA DL PI IQIVREC GLPIAITTVA+AL+NKPS IW DAL
Sbjct: 309 EDESWNLFKA-MAGEIV-EASDLKPIVIQIVRECAGLPIAITTVARALRNKPSDIWNDAL 368

Query: 121 DQLRRDDVVMSNIRGMNKKVY 142
           DQL+  DV M+NI  M+KKVY
Sbjct: 369 DQLKSVDVGMANIGEMDKKVY 387

The following BLAST results are available for this feature:
BLAST of Lsi11G004960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPS5_ARATH1.3e-1429.55Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2[more]
DRL17_ARATH3.6e-1430.15Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana GN=At1g613... [more]
DRL1_ARATH1.1e-1329.27Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g122... [more]
DRL27_ARATH1.4e-1331.91Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 S... [more]
DRL2_ARATH2.4e-1332.23Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g122... [more]
BLAST of Lsi11G004960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMT4_CUCSA1.5e-5174.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403680 PE=3 SV=1[more]
A0A097NYW9_CUCME9.9e-5175.18Vat-like protein OS=Cucumis melo PE=3 SV=1[more]
A0A097NYY2_CUCME9.9e-5175.18Vat protein OS=Cucumis melo PE=3 SV=1[more]
A0A0A0LLJ0_CUCSA2.1e-4874.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G014830 PE=3 SV=1[more]
A0A0A0LN08_CUCSA9.6e-3861.87Uncharacterized protein OS=Cucumis sativus GN=Csa_2G096930 PE=3 SV=1[more]
BLAST of Lsi11G004960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12220.17.0e-1629.55 Disease resistance protein (CC-NBS-LRR class) family[more]
AT1G61300.12.1e-1530.15 LRR and NB-ARC domains-containing disease resistance protein[more]
AT1G12280.16.0e-1529.27 LRR and NB-ARC domains-containing disease resistance protein[more]
AT4G27190.17.8e-1531.91 NB-ARC domain-containing disease resistance protein[more]
AT1G12290.11.3e-1432.23 Disease resistance protein (CC-NBS-LRR class) family[more]
BLAST of Lsi11G004960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778674416|ref|XP_011650207.1|2.2e-5174.47PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus][more]
gi|700207994|gb|KGN63113.1|2.2e-5174.47hypothetical protein Csa_2G403680 [Cucumis sativus][more]
gi|699009313|gb|AIU36098.1|1.4e-5075.18vat protein [Cucumis melo][more]
gi|699009315|gb|AIU36099.1|1.4e-5075.18vat-like protein [Cucumis melo][more]
gi|659070479|ref|XP_008455306.1|3.2e-5073.76PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Cucumis mel... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043531ADP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR002182NB-ARC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
cellular_component GO:0005575 cellular_component
molecular_function GO:0043531 ADP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G004960.1Lsi11G004960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 3..132
score: 8.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..132
score: 1.04
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 1..141
score: 1.6
NoneNo IPR availablePANTHERPTHR23155:SF554SUBFAMILY NOT NAMEDcoord: 1..141
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G004960Cucumber (Chinese Long) v3cuclsiB108
Lsi11G004960Watermelon (97103) v2lsiwmbB087
Lsi11G004960Wax gourdlsiwgoB108
Lsi11G004960Cucumber (Gy14) v1cgylsiB100
Lsi11G004960Cucurbita maxima (Rimu)cmalsiB159
Lsi11G004960Cucurbita maxima (Rimu)cmalsiB715
Lsi11G004960Cucurbita moschata (Rifu)cmolsiB148
Lsi11G004960Cucurbita moschata (Rifu)cmolsiB706
Lsi11G004960Cucurbita pepo (Zucchini)cpelsiB074
Lsi11G004960Cucurbita pepo (Zucchini)cpelsiB659
Lsi11G004960Wild cucumber (PI 183967)cpilsiB096
Lsi11G004960Cucumber (Chinese Long) v2culsiB098
Lsi11G004960Melon (DHL92) v3.5.1lsimeB115
Lsi11G004960Melon (DHL92) v3.5.1lsimeB118
Lsi11G004960Watermelon (Charleston Gray)lsiwcgB098
Lsi11G004960Watermelon (97103) v1lsiwmB107
Lsi11G004960Cucumber (Gy14) v2cgyblsiB089
Lsi11G004960Melon (DHL92) v3.6.1lsimedB123
Lsi11G004960Silver-seed gourdcarlsiB271
Lsi11G004960Silver-seed gourdcarlsiB654