Lsi11G004920 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G004920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DCD (Development and cell death) domain protein
Location	chr11 : 5193944 .. 5194759 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCCGGTTTCCCCCAAACTAAGAGGTCCTGCTTATCCAGACCCAACAGCCATACTGTTTTTCAGCTGAAAGACTGATTTTTTCATAAAGTCGGTTCATAGATCAAGAAAGAATTCAGCTGCTTATAGGGCGGTTACGCGATACGTCTTTAGCCTAACGAAAAGGAAAATGTTAAGCAAAGTATCTCAAAAGAGGAGCATATCGAAAAGGGAGAAGAGACTTTCTACTAGCCATAAACACAATTCTAAGTCTAAAAGTAGCATCAAAGAAGGGAAGATCATGGAGAAGGCTGGTTCTTCAGATAAGAGCACAAAGAATCAGAAAAAGAAAGAAAATGATAGAGAGAAAAAGAGTCGAAGAGAAGATATAATAAGTAAAGAAAACCTTGGTGGACTGATTTTCATGTGTAGTGCGAAAACGAAGCTAGATTGTTTTCACTATAACGTAATGAGTGTTTCTGCTGGCAAAAAGGATGTAGTCTTGGCAATCAAACCTGGGTTGAAACTCTTTCTCTACGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGTATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTGTGGGGCTTTTCTTGCTCAGGTTCAAGTTTTGTTAGTTATTATAAACTACTCTAGAAGCTATTTTTTCATCTGCCAAGGATATCGTCTCAATTTCAAAATTGAAATTTCAGGTATAGTACAATATTACAAGGATTGTATCCACAACCTAAAAGTATTTTCAAGAAGGCTATCCAAGAAAGCTATCATGAGAAGCACAACTTTAAAGCTAAACTCATAG

mRNA sequence

ATGGGCTCCGGTTTCCCCCAAACTAAGAGATCAAGAAAGAATTCAGCTGCTTATAGGGCGGTTACGCGATACGTCTTTAGCCTAACGAAAAGGAAAATGTTAAGCAAAGTATCTCAAAAGAGGAGCATATCGAAAAGGGAGAAGAGACTTTCTACTAGCCATAAACACAATTCTAAGTCTAAAAGTAGCATCAAAGAAGGGAAGATCATGGAGAAGGCTGGTTCTTCAGATAAGAGCACAAAGAATCAGAAAAAGAAAGAAAATGATAGAGAGAAAAAGAGTCGAAGAGAAGATATAATAAGTAAAGAAAACCTTGGTGGACTGATTTTCATGTGTAGTGCGAAAACGAAGCTAGATTGTTTTCACTATAACGTAATGAGTGTTTCTGCTGGCAAAAAGGATGTAGTCTTGGCAATCAAACCTGGGTTGAAACTCTTTCTCTACGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGTATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTGTGGGGCTTTTCTTGCTCAGGTTCAAGTTTTGTATAGTACAATATTACAAGGATTGTATCCACAACCTAAAAGTATTTTCAAGAAGGCTATCCAAGAAAGCTATCATGAGAAGCACAACTTTAAAGCTAAACTCATAG

Coding sequence (CDS)

ATGGGCTCCGGTTTCCCCCAAACTAAGAGATCAAGAAAGAATTCAGCTGCTTATAGGGCGGTTACGCGATACGTCTTTAGCCTAACGAAAAGGAAAATGTTAAGCAAAGTATCTCAAAAGAGGAGCATATCGAAAAGGGAGAAGAGACTTTCTACTAGCCATAAACACAATTCTAAGTCTAAAAGTAGCATCAAAGAAGGGAAGATCATGGAGAAGGCTGGTTCTTCAGATAAGAGCACAAAGAATCAGAAAAAGAAAGAAAATGATAGAGAGAAAAAGAGTCGAAGAGAAGATATAATAAGTAAAGAAAACCTTGGTGGACTGATTTTCATGTGTAGTGCGAAAACGAAGCTAGATTGTTTTCACTATAACGTAATGAGTGTTTCTGCTGGCAAAAAGGATGTAGTCTTGGCAATCAAACCTGGGTTGAAACTCTTTCTCTACGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGTATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTGTGGGGCTTTTCTTGCTCAGGTTCAAGTTTTGTATAGTACAATATTACAAGGATTGTATCCACAACCTAAAAGTATTTTCAAGAAGGCTATCCAAGAAAGCTATCATGAGAAGCACAACTTTAAAGCTAAACTCATAG

Protein sequence

MGSGFPQTKRSRKNSAAYRAVTRYVFSLTKRKMLSKVSQKRSISKREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKENDREKKSRREDIISKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCIHNLKVFSRRLSKKAIMRSTTLKLNS

Homology

[Close]

BLAST of Lsi11G004920 vs. Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = 1


Query: 63  SIKEGKIMEKAGSSDKSTKNQKKKENDREKKSRR----EDIISKENLGGLIFMCSAKTKL 122
           S+K+ K      +S+   KN  + +N  EK+ +     E +   E +GG IF+C+  T  
Sbjct: 28  SVKKNKNKNNNNNSESGNKNGGENKNGVEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQ 87

Query: 123 DCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSSSGGMKLEPKAF 175
           +     +  +    +D V AI PGL LFLY++    L+G+++ +S GG  ++P A+
Sbjct: 88  ENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAW 143

[Close]

BLAST of Lsi11G004920 vs. TrEMBL
Match: A0A067JI05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23414 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 45  KREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKEN-DREKKSRREDIISKE 104
           K ++R++ S ++ S  +S   EGK     G++DK++++Q+ KE  D ++KS+R++   KE
Sbjct: 181 KSQERIAGSSRNGSNLRS---EGK----PGNTDKNSRSQRNKEKLDLKEKSQRDE--RKE 240

Query: 105 NLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSS 164
            LGGLIFMCSAKTK DCF Y VM V+  KKD+VL +KPGLKLFLYDFDLRL+YGIYK SS
Sbjct: 241 KLGGLIFMCSAKTKPDCFRYQVMGVTGSKKDLVLGVKPGLKLFLYDFDLRLMYGIYKASS 300

Query: 165 SGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           SGGM+LEPKAF G F ++ +F I   +KDC
Sbjct: 301 SGGMRLEPKAFGGSFPVQVRFSI---HKDC 318

[Close]

BLAST of Lsi11G004920 vs. TrEMBL
Match: V4T9Z2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000711mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 1


Query: 43  ISKREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKENDREKKSRREDIISK 102
           + K  ++     +     K+  K+G   +K   SDKS KNQK+KE  R+    +E  + K
Sbjct: 121 LDKNHRKQRGEEEIGGADKNLWKQGG-EQKIPGSDKSLKNQKEKEKQRDAGRSQEKEMRK 180

Query: 103 ENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVS 162
           + LGGLIFMCS KTK DCFHY+VM VS  +KD+VL IKPGLKLFLYDFDL+ +YGIYK S
Sbjct: 181 DKLGGLIFMCSKKTKPDCFHYHVMGVSGSRKDLVLGIKPGLKLFLYDFDLKFMYGIYKAS 240

Query: 163 SSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCI 195
           SSGGMKLEPKAF G F  +  F +   ++DC+
Sbjct: 241 SSGGMKLEPKAFGGAFPAQVHFDV---HRDCL 268

[Close]

BLAST of Lsi11G004920 vs. TrEMBL
Match: A0A067DTL8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039335mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 1


Query: 43  ISKREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKENDREKKSRREDIISK 102
           + K  ++     +     K+  K+G   +K   SDKS KNQK+KE  R+    +E  + K
Sbjct: 121 LDKNHRKQRGEEEIGGADKNLWKQGG-EQKIPGSDKSLKNQKEKEKQRDAGRSQEKEMRK 180

Query: 103 ENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVS 162
           + LGGLIFMCS KTK DCFHY+VM VS  +KD+VL IKPGLKLFLYDFDL+ +YGIYK S
Sbjct: 181 DKLGGLIFMCSKKTKPDCFHYHVMGVSGSRKDLVLGIKPGLKLFLYDFDLKFMYGIYKAS 240

Query: 163 SSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCI 195
           SSGGMKLEPKAF G F  +  F +   ++DC+
Sbjct: 241 SSGGMKLEPKAFGGAFPAQVHFDV---HRDCL 268

[Close]

BLAST of Lsi11G004920 vs. TrEMBL
Match: M5WGY2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004210mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29
Identity = 85/156 (54.49%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 44  SKREKRLS-TSHKHNSKSKSSIKE-GKIMEKAGSSDKSTKNQKKKENDREKKSRREDII- 103
           SKREK+ + T+ KH  KS  + K  GKI E   S       +K++ +D+  KS+R     
Sbjct: 3   SKREKQENITNEKHAEKSHRAQKNPGKIDESEKSLQNQQSTEKRRGSDKSVKSQRNSEKH 62

Query: 104 --SKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGI 163
              +E LGGLIFMCS KTK DCFHY +M VS GKKD+VL IKPGLKLFL+DFDL+LLYG+
Sbjct: 63  DEKREKLGGLIFMCSGKTKPDCFHYRIMGVSMGKKDLVLGIKPGLKLFLFDFDLKLLYGV 122

Query: 164 YKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCI 195
           YK SSSGG+KLEPKAF G F  + +F +    KDC+
Sbjct: 123 YKASSSGGLKLEPKAFGGAFPAQVRFNV---EKDCL 155

[Close]

BLAST of Lsi11G004920 vs. TrEMBL
Match: M5X872_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026140mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 83/156 (53.21%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 44  SKREKRLS-TSHKHNSKSKSSIKE-GKIMEKAGSSDKSTKNQKKKENDREKKSRREDII- 103
           SKREK+ + T+ +H  KS  + K  GKI E   S  K    +K++ +D+  KS+R     
Sbjct: 3   SKREKQENITNGEHAEKSHQAQKTPGKIDESEKSRQKQKGTEKRRGSDKSVKSQRNSEKH 62

Query: 104 --SKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGI 163
              +E LGGLIFMCS KTK DCFHY++M VS G+KD+VL IKPGLKLFL+DFDL+LLYG+
Sbjct: 63  DEKREKLGGLIFMCSGKTKPDCFHYSIMGVSMGEKDLVLGIKPGLKLFLFDFDLKLLYGV 122

Query: 164 YKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCI 195
           YK SSSGG++LEPKAF G F  + +F +    KDC+
Sbjct: 123 YKASSSGGLELEPKAFGGAFPAQVRFNV---EKDCL 155

[Close]

BLAST of Lsi11G004920 vs. TAIR10
Match: AT2G32910.1 (AT2G32910.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 68/169 (40.24%), Postives = 103/169 (60.95%), Query Frame = 1


Query: 28  LTKRKMLSKVSQKRSIS--KREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKK 87
           + K+ +   V  K  ++  KR KR   + +    +K   ++  ++  A ++++  + +K+
Sbjct: 244 VAKKAIDGSVEAKTGLTEDKRRKRKRPTKQVRDSNKKLRQD--VVAGADTTEQGMEERKE 303

Query: 88  KENDREKKSRREDIISKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKL 147
           +  D EK  R  D   K  +GGLIFMC+ KT+ DCF ++VM V   +KD V  IKPGLKL
Sbjct: 304 QPVDPEK--REMDGPGKVKIGGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKL 363

Query: 148 FLYDFDLRLLYGIYKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDCI 195
           FLYD+DL+LLYGI++ SS+GGMKLE  AF G F  + +F   + + DCI
Sbjct: 364 FLYDYDLKLLYGIFEASSAGGMKLERNAFGGSFPAQVRF---KVFSDCI 405

[Close]

BLAST of Lsi11G004920 vs. TAIR10
Match: AT5G61910.1 (AT5G61910.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 103 ENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVS 162
           E L G IFMC+ +TK DC+ Y V  +  G KDVV +IKPG+KLFLYDF+ RLLYG+Y+ +
Sbjct: 59  EQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEAT 118

Query: 163 SSGGMKLEPKAFVGLFLLRFKFCIV 188
             G + +EP+AF G +  +  F IV
Sbjct: 119 VGGRLDIEPEAFEGKYPAQVGFRIV 143

[Close]

BLAST of Lsi11G004920 vs. TAIR10
Match: AT5G42050.1 (AT5G42050.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 43/133 (32.33%), Postives = 66/133 (49.62%), Query Frame = 1


Query: 55  KHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKENDREKKSRR-------------EDIIS 114
           K+N+K+K  I E   ++K G   K+ KNQ+   N R +  +              E +  
Sbjct: 156 KNNNKNKG-IDEDHQIQKGGK--KNRKNQQNNNNQRNEDDKNNGLDKRFKTLPPAEALPR 215

Query: 115 KENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKV 174
            E +GG IF+C+  T  +     +  +    +D V AI PGL LFLY++    L+GIY+ 
Sbjct: 216 NETIGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEA 275

[Close]

BLAST of Lsi11G004920 vs. TAIR10
Match: AT2G35140.1 (AT2G35140.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.4e-08
Identity = 23/68 (33.82%), Postives = 39/68 (57.35%), Query Frame = 1


Query: 107 GLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSSSGG 166
           G IFM +  T+ +C    +  +  G    V  +K G+ LFL++F+ R L+G+++  S G 
Sbjct: 23  GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82

Query: 167 MKLEPKAF 175
           + +EP AF
Sbjct: 83  INIEPNAF 90

[Close]

BLAST of Lsi11G004920 vs. TAIR10
Match: AT3G11000.2 (AT3G11000.2 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.4e-08
Identity = 25/75 (33.33%), Postives = 44/75 (58.67%), Query Frame = 1


Query: 100 ISKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIY 159
           + K +L G+IF C   T  +C+  N+  + A     +  I PGL LFL+++  R L+GI+
Sbjct: 125 LKKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIF 184

Query: 160 KVSSSGGMKLEPKAF 175
           + +S G + ++ KA+
Sbjct: 185 EAASEGKLNIDSKAW 199

[Close]

BLAST of Lsi11G004920 vs. NCBI nr
Match: gi|778730855|ref|XP_011659868.1| (PREDICTED: uncharacterized protein LOC101215107 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.3e-47
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 36  KVSQKRSISKRE-----KRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKENDR 95
           K + K+S+SK E     +  S S K NS+SK+S+KEGKI+EKAGSS KS KNQKKKE  R
Sbjct: 230 KENVKKSVSKEEHIEKGEETSASKKQNSESKNSVKEGKIIEKAGSSSKSIKNQKKKEKVR 289

Query: 96  EKKSRREDIISKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDF 155
           E++SRRED  +KENLGGLIFMCSAKTK DCFHYNVM VSAGK DVVLAIKPGLKLFLYDF
Sbjct: 290 EQRSRREDK-NKENLGGLIFMCSAKTKPDCFHYNVMGVSAGKMDVVLAIKPGLKLFLYDF 349

Query: 156 DLRLLYGIYKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           DL+LLYGIYK SS+GGMKLEPKAF G F  + +F I   YKDC
Sbjct: 350 DLKLLYGIYKASSTGGMKLEPKAFNGAFPAQVRFNI---YKDC 388

[Close]

BLAST of Lsi11G004920 vs. NCBI nr
Match: gi|659071592|ref|XP_008460785.1| (PREDICTED: uncharacterized protein LOC103499546 [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 1.7e-47
Identity = 118/164 (71.95%), Postives = 130/164 (79.27%), Query Frame = 1


Query: 30  KRKMLSKVSQKRSISKREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKEND 89
           K  +   VS+K  I K E   S S K NS+SK+S+KEGKI+EKAGSS KS KNQKKKE  
Sbjct: 205 KENVKKSVSKKEHIEKGEDT-SASKKQNSESKNSVKEGKIIEKAGSSSKSIKNQKKKEKV 264

Query: 90  REKKSRREDIISKENLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYD 149
           RE++ +RED  SKENLGGLIFMCSAKTK DCFHYNVM VSAGKKDVVLAIKPGLKLFLYD
Sbjct: 265 REQRIQREDN-SKENLGGLIFMCSAKTKPDCFHYNVMGVSAGKKDVVLAIKPGLKLFLYD 324

Query: 150 FDLRLLYGIYKVSSSGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           FDLRLLYGIYK SS+GGMKLEPKAF G F  + +F I   YKDC
Sbjct: 325 FDLRLLYGIYKASSTGGMKLEPKAFNGAFPAQVRFNI---YKDC 363

[Close]

BLAST of Lsi11G004920 vs. NCBI nr
Match: gi|643708665|gb|KDP23581.1| (hypothetical protein JCGZ_23414 [Jatropha curcas])

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 45  KREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKEN-DREKKSRREDIISKE 104
           K ++R++ S ++ S  +S   EGK     G++DK++++Q+ KE  D ++KS+R++   KE
Sbjct: 181 KSQERIAGSSRNGSNLRS---EGK----PGNTDKNSRSQRNKEKLDLKEKSQRDE--RKE 240

Query: 105 NLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSS 164
            LGGLIFMCSAKTK DCF Y VM V+  KKD+VL +KPGLKLFLYDFDLRL+YGIYK SS
Sbjct: 241 KLGGLIFMCSAKTKPDCFRYQVMGVTGSKKDLVLGVKPGLKLFLYDFDLRLMYGIYKASS 300

Query: 165 SGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           SGGM+LEPKAF G F ++ +F I   +KDC
Sbjct: 301 SGGMRLEPKAFGGSFPVQVRFSI---HKDC 318

[Close]

BLAST of Lsi11G004920 vs. NCBI nr
Match: gi|802757312|ref|XP_012089143.1| (PREDICTED: uncharacterized protein LOC105647607 [Jatropha curcas])

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 45  KREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKEN-DREKKSRREDIISKE 104
           K ++R++ S ++ S  +S   EGK     G++DK++++Q+ KE  D ++KS+R++   KE
Sbjct: 206 KSQERIAGSSRNGSNLRS---EGK----PGNTDKNSRSQRNKEKLDLKEKSQRDE--RKE 265

Query: 105 NLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSS 164
            LGGLIFMCSAKTK DCF Y VM V+  KKD+VL +KPGLKLFLYDFDLRL+YGIYK SS
Sbjct: 266 KLGGLIFMCSAKTKPDCFRYQVMGVTGSKKDLVLGVKPGLKLFLYDFDLRLMYGIYKASS 325

Query: 165 SGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           SGGM+LEPKAF G F ++ +F I   +KDC
Sbjct: 326 SGGMRLEPKAFGGSFPVQVRFSI---HKDC 343

[Close]

BLAST of Lsi11G004920 vs. NCBI nr
Match: gi|802760533|ref|XP_012089462.1| (PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas])

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 45  KREKRLSTSHKHNSKSKSSIKEGKIMEKAGSSDKSTKNQKKKEN-DREKKSRREDIISKE 104
           K ++R++ S ++ S  +S   EGK     G++DK++++Q+ KE  D ++KS+R++   KE
Sbjct: 44  KSQERIAGSSRNGSNLRS---EGK----PGNTDKNSRSQRNKEKLDLKEKSQRDE--RKE 103

Query: 105 NLGGLIFMCSAKTKLDCFHYNVMSVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKVSS 164
            LGGLIFMCSAKTK DCF Y VM V+  KKD+VL +KPGLKLFLYDFDLRL+YGIYK SS
Sbjct: 104 KLGGLIFMCSAKTKPDCFRYQVMGVTGSKKDLVLGVKPGLKLFLYDFDLRLMYGIYKASS 163

Query: 165 SGGMKLEPKAFVGLFLLRFKFCIVQYYKDC 194
           SGGM+LEPKAF G F ++ +F I   +KDC
Sbjct: 164 SGGMRLEPKAFGGSFPVQVRFSI---HKDC 181

The following BLAST results are available for this feature:

BLAST of Lsi11G004920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
B2_DAUCA	2.3e-07	30.17	B2 protein OS=Daucus carota PE=2 SV=1	[more]

BLAST of Lsi11G004920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067JI05_JATCU	1.8e-30	56.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23414 PE=4 SV=1	[more]
V4T9Z2_9ROSI	1.1e-29	52.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000711mg PE=4 SV=1	[more]
A0A067DTL8_CITSI	1.1e-29	52.63	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039335mg PE=4 SV=1	[more]
M5WGY2_PRUPE	1.1e-29	54.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004210mg PE=4 SV=1	[more]
M5X872_PRUPE	1.3e-28	53.21	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026140mg PE=4 SV=1	[more]

BLAST of Lsi11G004920 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32910.1	1.3e-21	40.24	DCD (Development and Cell Death) domain protein	[more]
AT5G61910.1	1.9e-20	51.76	DCD (Development and Cell Death) domain protein	[more]
AT5G42050.1	2.9e-08	32.33	DCD (Development and Cell Death) domain protein	[more]
AT2G35140.1	8.4e-08	33.82	DCD (Development and Cell Death) domain protein	[more]
AT3G11000.2	8.4e-08	33.33	DCD (Development and Cell Death) domain protein	[more]

BLAST of Lsi11G004920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730855\|ref\|XP_011659868.1\|	1.3e-47	71.17	PREDICTED: uncharacterized protein LOC101215107 [Cucumis sativus]	[more]
gi\|659071592\|ref\|XP_008460785.1\|	1.7e-47	71.95	PREDICTED: uncharacterized protein LOC103499546 [Cucumis melo]	[more]
gi\|643708665\|gb\|KDP23581.1\|	2.5e-30	56.00	hypothetical protein JCGZ_23414 [Jatropha curcas]	[more]
gi\|802757312\|ref\|XP_012089143.1\|	2.5e-30	56.00	PREDICTED: uncharacterized protein LOC105647607 [Jatropha curcas]	[more]
gi\|802760533\|ref\|XP_012089462.1\|	2.5e-30	56.00	PREDICTED: uncharacterized protein LOC105647846 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013989	Dev_and_cell_death_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G004920.1	Lsi11G004920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013989	Development/cell death domain	PFAM	PF10539	Dev_Cell_Death	coord: 106..175 score: 1.9
IPR013989	Development/cell death domain	SMART	SM00767	dcd	coord: 103..212 score: 6.4
IPR013989	Development/cell death domain	PROFILE	PS51222	DCD	coord: 103..219 score: 31
None	No IPR available	PANTHER	PTHR10857	COPINE	coord: 35..194 score: 7.8
None	No IPR available	PANTHER	PTHR10857:SF46	DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN	coord: 35..194 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G004920	Silver-seed gourd	carlsiB271
Lsi11G004920	Silver-seed gourd	carlsiB654
Lsi11G004920	Cucumber (Chinese Long) v3	cuclsiB108
Lsi11G004920	Watermelon (97103) v2	lsiwmbB087
Lsi11G004920	Wax gourd	lsiwgoB108
Lsi11G004920	Cucurbita maxima (Rimu)	cmalsiB159
Lsi11G004920	Cucurbita maxima (Rimu)	cmalsiB715
Lsi11G004920	Cucurbita moschata (Rifu)	cmolsiB148
Lsi11G004920	Cucurbita moschata (Rifu)	cmolsiB706
Lsi11G004920	Cucurbita pepo (Zucchini)	cpelsiB074
Lsi11G004920	Cucurbita pepo (Zucchini)	cpelsiB659
Lsi11G004920	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G004920	Cucumber (Chinese Long) v2	culsiB098
Lsi11G004920	Melon (DHL92) v3.5.1	lsimeB115
Lsi11G004920	Watermelon (Charleston Gray)	lsiwcgB098
Lsi11G004920	Watermelon (97103) v1	lsiwmB107
Lsi11G004920	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G004920	Melon (DHL92) v3.6.1	lsimedB123