Lsi11G003140 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTTTCTCTTATTAGATGAATCTTCAACTTTAATAGAATTTCTCTTCTCTTACAACTCAAACTCTGTCGCCATAATTAGAAAGAATCCGATTCTTGTTTCTTCACAGATCTACCATTAGCTATCTGGGAATTCCATTCTTCACTTCACTCTCAAAATCTTCAATCTCCTTCTTCAGAAGTTTTACTTTGATCTCACATTTCCATGGCAAATGCCTGGAAAAAAGACAAAACCCACAAGTTACTTTCCCCCATTTCTCTCTTCTTTCTCTTCTCTTTCTCCATCCTCATCATCTTCTTCTTCCTCTTCGGTAACTCAAGCTCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAACCCCATTTTCCATTTCGAACAATCTCCCCCTTCGATTGCTTCAAATGCCCTCAATCGTACCCTGTGATTGCCAACGTTGTGGAAGGAGTTCGATACCCGTTTCTGTTTTCGATTGCAGATTTGGGAAATTTGCCCGACAAACCCCACAAGAATATTGTCAGGATGCTGAAGGGAAAACCCTTTCGGAAGCCAGACATTTCAGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGGGCGATTCGAGTAATGGGTTTGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGTTTCGCGGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTACTTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAGGCTTGGGAATATCACTGTTCATAAGGTATTATTATCTGCTTCATAATATCAAACTTTACAAGTTTTATGGTTCTTGTTGCTGAACTTGCAGTCTCATTTGTGATTATATTTGATTAGATCTTGTTCCAATTTTATCTGATGTTCCCGAAGGGACAGATTTGATTAGATCTTGAAACTGGGAAATTGTGAGAAATAACCTCTAAAAATTTCAGAGCAACCTTTTTGGCTCTAAATATGGTAACAAAATTGTTCCCTTTTTGGGAGCTATCTGGATGGGTTGGCGGTGAGGAAGATTGAGGAAGATTGAAAGTTAACTTGCATATTATACTTCAGAAGTTTATTTTCTATATATGTCTATCCCTTCAGTATTTTTAGTGTAATAAAACTTGTTTATATTGGGCATGAAAAACCTGCTTAGCTTATCTAATTATGTAGATTACAGTGAGAATCAACAACTTTGAAAAAAATGGAAGAATACCAATAAAGAGAAAAAAAAAGACCCAAGAAGGGAAAAAAAAAACACTAGAAAAGGGTTTCGAATAATTACAAAAAAAAAACTCTGATACCGAGGCTCAGGCTCAAAGAGAAAAATAGAACCTCATCAAGGATCAAGGCATTTCCATATGTTTATGTTACGAACCTGAAATCAAGATGGAAGGTAACAGGAAATAGTGTTGTTTATATAAGAATGTCCCAACAGATTTGAAATCTCCTAAAACTAATGTCCAAATTTTTCATTCCCAAACCCGTTAACACACTATTTATTACCACCTTTCACCAGCCAACTTTTTGCTGATGAAAAGTTTCCCTCCTAGTATTCTTATAATATCTTTAATGAATTCATATTACCAATTGATTCTTTGTCATGGTGCCTTAAAAACTCTTTTAGATGTTCTTGAACGAAGTTGAATAATGAGAAAGTTTGGTTTGCATTTGGTCTAGATTTCTTCTTAACTACATTGGAATGATGGAAATGTTTATAAAGTCAAAGGAATTCGGAGGTATGATTCAATCTTCAAGATGCATAAGAAGCTGCCAAATACAGTAGAATTTTATATTAGAATCTTAGAATCTACTTCAGATATACTTACGAGTTTCACGATAACCCAACACAGTAGTGTATTCTTTTGTGAAATTAGTCGATGTGTGGGTTAGCTATCATTATACAGTTATAGTTGCTATATAAAAATGATATATATTAGGATTTCTTTTTGGAATTGAGATGATGACAGAAAACATCACCTAAACTTAGTTTTACCAGCAGCATTGTGAAAGTTTATTGGTTTCTTACAATTCAATGTCATGCCATTGGTCATATGTGCAATCTTCAAAATTTCTTTGCGTGACTTTTCATTTCTTTGCTTTTCTAATGAAGTGGGGGCATTGAGTGATCTGGTTCTGTTTTTTAGTAATCTTCTTTCCAAACACTTTAAGATGCATGATATGCTCACAGACTTTTGCTCATTACCCAGTTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACTGGTGCAAAGTTGGCATTCAAATCCAATGAAGAAATAGCAGTTCAAGTGAAGTCAATTCCACTGGATGAAGTAATCCCGGATTCAGAACGAGTGCTTCTAATAAAAATCGACGTACAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGGAAGGGCACTGAAGCCCCATATCTCATATATGAGGAAGATGAAAGGCTTCTAAAAGCCAGTAATAGTAGTTCCAGGGAGATCAGAGAATTCCTTCATTCTGTAGGTTACCATCATTGCACTCAACATGGTACAGATGCACATTGCACAAAGACTGGTTGA TTTAGTTTCTCTTATTAGATGAATCTTCAACTTTAATAGAATTTCTCTTCTCTTACAACTCAAACTCTGTCGCCATAATTAGAAAGAATCCGATTCTTGTTTCTTCACAGATCTACCATTAGCTATCTGGGAATTCCATTCTTCACTTCACTCTCAAAATCTTCAATCTCCTTCTTCAGAAGTTTTACTTTGATCTCACATTTCCATGGCAAATGCCTGGAAAAAAGACAAAACCCACAAGTTACTTTCCCCCATTTCTCTCTTCTTTCTCTTCTCTTTCTCCATCCTCATCATCTTCTTCTTCCTCTTCGGTAACTCAAGCTCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAACCCCATTTTCCATTTCGAACAATCTCCCCCTTCGATTGCTTCAAATGCCCTCAATCGTACCCTGTGATTGCCAACGTTGTGGAAGGAGTTCGATACCCGTTTCTGTTTTCGATTGCAGATTTGGGAAATTTGCCCGACAAACCCCACAAGAATATTGTCAGGATGCTGAAGGGAAAACCCTTTCGGAAGCCAGACATTTCAGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGGGCGATTCGAGTAATGGGTTTGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGTTTCGCGGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTACTTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAGGCTTGGGAATATCACTGTTCATAAGTTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACTGGTGCAAAGTTGGCATTCAAATCCAATGAAGAAATAGCAGTTCAAGTGAAGTCAATTCCACTGGATGAAGTAATCCCGGATTCAGAACGAGTGCTTCTAATAAAAATCGACGTACAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGGAAGGGCACTGAAGCCCCATATCTCATATATGAGGAAGATGAAAGGCTTCTAAAAGCCAGTAATAGTAGTTCCAGGGAGATCAGAGAATTCCTTCATTCTGTAGGTTACCATCATTGCACTCAACATGGTACAGATGCACATTGCACAAAGACTGGTTGA ATGGCAAATGCCTGGAAAAAAGACAAAACCCACAAGTTACTTTCCCCCATTTCTCTCTTCTTTCTCTTCTCTTTCTCCATCCTCATCATCTTCTTCTTCCTCTTCGGTAACTCAAGCTCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAACCCCATTTTCCATTTCGAACAATCTCCCCCTTCGATTGCTTCAAATGCCCTCAATCGTACCCTGTGATTGCCAACGTTGTGGAAGGAGTTCGATACCCGTTTCTGTTTTCGATTGCAGATTTGGGAAATTTGCCCGACAAACCCCACAAGAATATTGTCAGGATGCTGAAGGGAAAACCCTTTCGGAAGCCAGACATTTCAGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGGGCGATTCGAGTAATGGGTTTGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGTTTCGCGGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTACTTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAGGCTTGGGAATATCACTGTTCATAAGTTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACTGGTGCAAAGTTGGCATTCAAATCCAATGAAGAAATAGCAGTTCAAGTGAAGTCAATTCCACTGGATGAAGTAATCCCGGATTCAGAACGAGTGCTTCTAATAAAAATCGACGTACAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGGAAGGGCACTGAAGCCCCATATCTCATATATGAGGAAGATGAAAGGCTTCTAAAAGCCAGTAATAGTAGTTCCAGGGAGATCAGAGAATTCCTTCATTCTGTAGGTTACCATCATTGCACTCAACATGGTACAGATGCACATTGCACAAAGACTGGTTGA MANAWKKDKTHKLLSPISLFFLFSFSILIIFFFLFGNSSSSEQSTPSFTIKPHFPFRTISPFDCFKCPQSYPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVTIQEVLEKMKGDSSNGFVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRVGELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVIPDSERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSREIREFLHSVGYHHCTQHGTDAHCTKTG
BLAST of Lsi11G003140 vs. TrEMBL
Match: A0A0A0LKZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006220 PE=4 SV=1) HSP 1 Score: 623.6 bits (1607), Expect = 1.3e-175 Identity = 313/322 (97.20%), Postives = 316/322 (98.14%), Query Frame = 1
BLAST of Lsi11G003140 vs. TrEMBL
Match: F6HH87_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g05250 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 2.6e-139 Identity = 250/322 (77.64%), Postives = 279/322 (86.65%), Query Frame = 1
BLAST of Lsi11G003140 vs. TrEMBL
Match: V7C9Y0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G164300g PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 7.8e-136 Identity = 241/321 (75.08%), Postives = 280/321 (87.23%), Query Frame = 1
BLAST of Lsi11G003140 vs. TrEMBL
Match: I1LZZ0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G167400 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-134 Identity = 239/320 (74.69%), Postives = 273/320 (85.31%), Query Frame = 1
BLAST of Lsi11G003140 vs. TrEMBL
Match: G7JCY4_MEDTR (FkbM family methyltransferase OS=Medicago truncatula GN=MTR_4g114160 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-133 Identity = 238/320 (74.38%), Postives = 276/320 (86.25%), Query Frame = 1
BLAST of Lsi11G003140 vs. TAIR10
Match: AT2G26680.1 (AT2G26680.1 Methyltransferase FkbM (InterPro:IPR006342)) HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-131 Identity = 239/322 (74.22%), Postives = 269/322 (83.54%), Query Frame = 1
BLAST of Lsi11G003140 vs. NCBI nr
Match: gi|449443085|ref|XP_004139311.1| (PREDICTED: uncharacterized protein LOC101221290 [Cucumis sativus]) HSP 1 Score: 623.6 bits (1607), Expect = 1.9e-175 Identity = 313/322 (97.20%), Postives = 316/322 (98.14%), Query Frame = 1
BLAST of Lsi11G003140 vs. NCBI nr
Match: gi|659070985|ref|XP_008457587.1| (PREDICTED: uncharacterized protein LOC103497251 [Cucumis melo]) HSP 1 Score: 619.4 bits (1596), Expect = 3.6e-174 Identity = 309/322 (95.96%), Postives = 316/322 (98.14%), Query Frame = 1
BLAST of Lsi11G003140 vs. NCBI nr
Match: gi|1009166818|ref|XP_015901790.1| (PREDICTED: uncharacterized protein LOC107434822 [Ziziphus jujuba]) HSP 1 Score: 513.8 bits (1322), Expect = 2.1e-142 Identity = 253/324 (78.09%), Postives = 290/324 (89.51%), Query Frame = 1
BLAST of Lsi11G003140 vs. NCBI nr
Match: gi|225445491|ref|XP_002285177.1| (PREDICTED: uncharacterized protein LOC100259301 isoform X1 [Vitis vinifera]) HSP 1 Score: 503.1 bits (1294), Expect = 3.7e-139 Identity = 250/322 (77.64%), Postives = 279/322 (86.65%), Query Frame = 1
BLAST of Lsi11G003140 vs. NCBI nr
Match: gi|502151567|ref|XP_004508504.1| (PREDICTED: uncharacterized protein LOC101512447 [Cicer arietinum]) HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-136 Identity = 245/320 (76.56%), Postives = 278/320 (86.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |