Lsi11G002720 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G002720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Serine incorporator 3
Location	chr11 : 2773557 .. 2784542 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCCACGTTCCTTTTACCAATGATGAGCAAGAAGCATTCACATTGAGTTGAAGTACTAAATTTGTTGCAAGGAGAGTCCACCAACCCTTTCCAATTCTCGCCACCATTCCGCCGCGGGCACCACCAACCACCTGCAACTCATGAATAAAACTGAAGATCCGTTCCACCTTTGAGACAATCTAAAAGATAGGCAACTGCTGATTCACCAAATTTCTGTCAGACCAAAGAGCCCAACATTCCATACAAAACAACACCATATCCGAACTCGAGAGGTTGTCAACCAGACCCACACACACCTCCATAATAGACCGCCTTCAGAAAGCCAAATTCAAAACGGAAGGAACCAATGTTTGTCACAGACTTTAGTTCTCTTACATCTAATAAAGGTATACTCCATAATCTCTCAATCTTTACCGTAACAAATACACTAAAGAAAGATTGAGATTTCTTTTCCCTATTTAGATTGTGATTAGAGGGCAAAATATTGTGATACGTTTTCCACATCATAAATTGTATTTTGTTTGGAGGGAAAGACATATAGCTTCTAAGCACACTGTGTTTGTGAATTAGTTGTTAATCTTGATACTTAATGAAAAATATGGTAAAAAAAATTGAAAGCATATAACATTTTAAAAAAATCTAAATTATAAAAATTAATTAGTCTAGATTTGACAGTATATTTATTTGAGTCATTATAGCTAAACCACACTATTCATTTTATTTTTCAAAAAATGTTGATTACAAAATTCAATTCCTCACCATTCAATATTTTAAAAATTCATGGATTTATTTGAAACAAAATTAAAGGTTAAAAAGTTCCCTTACACATAAAATTAAAATTTACATCACCAAATTAATACAAATCTCAAATTTAGTACCAATTAGACACAAACTTCAATGTTAAATTACAAATTAAGTCCTTAAACTTTCAATATATTTTTTTTCGAATCATGAATTTCAAGAATTTCAAATTTAATCCTTCAACTTTCAATATATTTTTAAATCATGAACTACTTGACTCAAAATCGAAAGTTCAAAATCTCATTAAACAACATTAAATTAAATTTTACATCTAATAGACTAAATAAAAATAAACTTCAAAGTTGATGATCAAATAGACACAAATTATACTTTTAAATTACAAATTTAGTCGTGAACTTTGAGACTTTTATCTCTTTGGTCTATAAAACTTTCAAAATTATATATTTAGTCCATGAACTTTTATTTATTTAATTTTTTTAAAAAAAATCATGAATATACCATACACAAAATTGAAAATTCAGACTTCCATTAAATGTATCATTAAAATTTATATCTAGTAAACCAAATAATCACAAACTTCTAAATTTGGAGAGGAAACTTGTAATTTCACATAAGACAATTTTTCTTTTTCTTTTTTTTTTTTAAATTAGCAAAATAAGGATTCATTTAGCACTACCTTTTCAGTTTAAAGCTGAAATTTACTTCATAAGTTTGGACGTCACGAGAAGAAAGAGAGCTGAAGCGAAAAGAAGAAGCTTACGGCGGGAAAAAGAAACAGCACAAAGCAAACCTTCCTAAAAGCAATCTCTCTCTCTCTCGTTCATATTATATAATTCAACTCCCAAAAATCTTGAGCAAATTCCAGATTCTCTCTCTGCTTCCTTTCTTCGATCCGGAGGGATTTTGTGCAGAATTTATCCGGAGGAAGAAGGCGAACATCCACCTTTTCTGCACTAACATTTTCAATCTCTTCAATCTCCTCTTCTTGAGTTCGGTAACTGGATCCGTTGCAGGTACGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTGGATAGTTAGTTTAACTGTTTAATTTTTGCTTTCTGCTGAGATAACTACTGGTTTTTATATGACTTATAACTCTTCGCTCTGAAATGTGTATTCGGATTCAGTGCGAATGTGCCGTGGTAATGGATCGTTTTAGTATTTGCGATCGAAATTTTGATTTCTGAATTTAATCAGAAACTAATGTGTACCGATACTGCATTTCTTCGTCAAGTTGGATTCCTCTATGAGAAATTTAGTCGTTCTTTTTTTTTTCCTTCTCTCCATTGCCGGCCAATGGATAGGTTCTTCGGTAGATATTTCTTTCTGTTCTATGTAGTAGTTATTCTTCGTGTTCAATCTGAAGGAAGAGAAGGTTTGACCGCGATCCGATCTATGTTTATCACAATCAAATTACGGTATATAGTTACAGTTCGTCAGAAGTTATTGTCCTGAAAAATGTTTAAATCGTTTTTCTGGAGGCTAATTTGATCGAGATAATTATTTTAAGTAAAGCAATGCCATCCGTAGGGAAACTGATGAACGAAGAATCATTTTGCTTCAAATTTGGTCTTCTGCAGTTCCTGCTTTTTTCATGCCTATACAGTACTGCTTAGCGAAACTTGGTCTAGGATCATAGAGCCGAGCCCACACAGATGCAATTACCAAGCTGACAGTTAAAGTATCAATGGTTATTTTATTATCGTCCTAATTTAAATTCAATCCGGGGGTATAATCGTCATAGAAGGAGTTTGGTAGAAGTTATTCCCCTGCAGCGGACTTACATTTCAAGAAATAGTCTCTTTTGTGCCCATTGCCCAAACTTGATGATGATTGATGCCCGCACGTATCCCGACGAACCAGCTTTTCTGGAATTAGAGTTGAAATTTCGGGTTCTTGGCTGATCGCCGAAAGGCGCATTTGATGCCGTGCCGGGCGGAAGGGGCCCTGATTTTTATTTATTATTAATTAATTTCTTTTTAGGGAGGGGTATGGCAGCGGCACAGGATCTCTGTTGAAACTTGAAATTAAACTCAAACCGTCTAACGTGCTTTTGATGGCGTTGATTTGATCCATCATAAACTGCTACATAGATTTAACATGACAGATCTCGAGAACGAAAGCAAAAGATATATCGCAGTAATAAGTTAATTTCATAACTTCCTGTTCCAGATCTCAAAACTGTAATTTTCAGTTTTTAACCCACAGTTCACACATCCAATTTTGGACTTTTGTTTCTCCGCTTAGTCATTGAGATTTCTTACCGCACCGCCTCCAACTCTTTTGTAATTGCTTCAGGGAAGAGAAGCAAGCAGTGGTGAAAACCCAGTTTGATTCTATATACTATACAACGAGTAATGGATGAAATGTAGCCTCCCTTAAGTAGACATGGAGACTAGCGGCGGAGGAAGCTCCGATGAGGGTCGCCGCATATTCAAGGCTGATACATGGTTTAGCCAATTTCGCAATGGGTCCAATCCTTGGATGGCAAGATATATTTATGCTTTAATGTTTCTAATTGCTAATCTGTTGGCATGGGCTGTCCGGGATTATGGCCGTGGCGCATTGACGGAGATGGAAAGTAAGACTGCTTTCTTCCTAACCATTTTTTTTACTATAAAAACTCTGATACATGTTCATGTCTTTCTGGCTGATACTGCAATTTTCCTGGCTTTCTATTCAGCCCAACCGTATGATCTCTTTTATATTGTTTAAAGTAGCTTCATGTCCACTTAATGACACATGTTTCTTTTTCAGATAACATTTAATGCCATTTTCATCTATGAACATGTTTAAAAGTAACTAGGGAGGGAAATGATCGTTTGTTTGATTGCCGTACGAAGTATTACTGATTTTACTTAATCTTTAGCCTGTGGATTAGAGTCGGCAATGCATTGCATTTCAATTTTTTATGCATGGCATTATCTCAACAATCTTTTTCAACCATTTTCTACTACTAATTGTTGGAATCTAACACGTGTTGAGAATGGGCATAGGATTAAAAGGATGTCACGGGGCGCGTGATTGTCTAGGTGCTGAAGGAGTTCTCCGTGTAAGCTTGGGTTGCTTTGTATCCTTCAGATAATTGAAGTCGCTACAGAAGTGTCAGCTCTGTCTTTGAGTTATAGTTTAATTTCAAGTTAAGGTCAATATCTAGTCCTTAACGTCTATTTTAGATATTTTATTTCACCATGTTTCTTTCTACAACCGGCACTTCAAAGATGCGAGGACGCAGAAGTACTTGGCATTCTGGATGGTGGTCTGCGAAGATTATCTTATGGATTGCCTTCATAATCATCCCCTTTGTGCTTCCTGCCACCGTTATTCGGCTATATGGTTAGTCCCTCCTCACCCCTTCCCCCTAAAAAGGAGTTTAAATTAACTAAAAAAAACTTCTGATGCATATTTTTGCAGGGGACGTTGCACATTTTGGTGCCGGGTACTTCCTTTTTCGCCGATGTACATTACTTAAAAGTTTACCCAAACTTTCAAATTTTGTTTCAGAAGCTGGTGGAATATATTTTGAATTTAACAAGAAGATTTCGATTGCTGGAACATGACGTATAAAGTTTTTGCCATTTTCAGGGTCTTTCTCCTGATTCAGCTTGTAAGCGTGATAAGCTTTATAACATGGTTGAATGATTGTTGTCAATCCGACAAGCCTGCAGACAGATGGTAAGCTACGTTACCTCATTCATTGTATACCAAATCCTTTCTGAAAAGAATTTTATGTACAGTTTTGATTTAGCTCTGAAATACTTTACAATTTGCAGTACTTTTGCAGGTGTGAAGTTTTTTTACCGAAAAAAGTGAATATATATATATATATATTAGAAGAAATAGATGAATCTTGAAAATTTAATTGAAGAAACTTTCTGACAGTTGAATTTAAATTTTGACATTTTGATAAACGTTTGGGGTGATAATTATTTCTGCCCCTATCATTTGGCAAGCACAGCGATATCAGATTATTTTCTTATAGCCTGAATTGATGTTTTGTGTTTGTATGACCAAGACTGGTCTATTGAAGATTCAATGTATATGAGAAATGATAAAGATGGCATTACATATGAGAAAGCAATAGGCTATGGTCTTACACTTGTAGTTTTCTAAATGTAACCTACTTTTCTTGCAGTCAAATACACATCATGTTACTTGCAACAATGGCATATGTCATCTGTTTAGTGGGAATCATTTCGATGTACATATGGTATGTGCCTCAGCCGACTTGTCTTCTCAATATATTTTTCATTACGTGGACACTGGTACTACTCCAACTCATGACCAGCGTTTCTCTCCATCCAAAAGTAAGTTCCAGCACAATTTATATATCCGTTCTTAGACTTCCCTGTCACTGAGTGATTTGGTGTATGACTGCTGTGCTAACTAAGACCACAACAGGTGAATGCTGGCATCTTAACTCCGGGTCTGATGGGGCTGTACATAGTATTTATTTGCTGGTGTGCCATTCGGAGGTATGCTGATCTTCTTTTATCCCCATCTCTCATAGTCATCATTAGTGTCAGTTTAGTACTCACGTCTAGTTTGATGATTTATATTCAACAATGTGTAGGTAGAGATAGAGATTCAAACATGGAACTTTTAGGATAAATAAACTAGAACTCATTGAGTTTGAGTTTGAAATAGCTTTTGAACGTTGTGTTTTTAAGTGAACAGTTGTTTACAAGTATTTTTTTTTTTTTCTTTCTTTTAAAGAAAACTAGTCAAGTGCTTTTTTAGAACTCAAAGATGTTTTTATTACAACAAAAGTCCTACCAATTCATAATTAATCTGCTCCAGACAAACCATTAGTTATTTACGTTATTCTCCTGTGGAGTGTGGGTGGGTGGTGAGGAGCCTATTTTTTCTTCAGTCCAATGGCACCCACAACAATTCTTTTATATTCTAAGAAACGCAAGTGCAAGGCGACATCATGCCTTCATCATCATTAAACGAAGGCAAACTTTGGATTTCATTTTAGAAGAGAGATTGGTATTCTTAACAACGGTTCTTGTAGTTGATATGTTACGATATATGTTCTTCCAGCTTCACCTTCAAAGTTCAAACACAATAGAAATAAACATTCTTTGCAATAAACTGCATTACAGTGTACAACAAATACTCTCGTGTATCAATATATGGTTATTAATTCTGTTAGGCTTTTAAGAATTTTGGGAATGCTGCTAAGTTGGACAATTTTCTTGTAGTGAACCAGGGGGAGGAAAGTGTGTTAGAAATGCAGAGACTTCAACCAAAACCGACTGGCTTACCATTATAGTAAGTTTTTTTCATTTTCCTTCCATCCATTTCTAGATCTATTTACTTCTAAAATGCATTATTGAGTAAGCAACAGTAGACCTTGTTTGATAACTATTTTGTTCCGATCTTTTATTTTTAATATTTAAGTTTATAAACACTATTTTTAGTGATGAGTTTTTTTGTTTTGTTAACTACTTTTTTCAAAAGTTTTCAAGATTCAAGTCAAGTTTTGAAATGCAACCAAATAAATAGATTTAAAGAATTTATTTTAGTTTTTGAAATTTTGATTAAGAATTCTAACCTTTGTTTTTGTTAAAGAAAAATTCTAACCTTCGTTGTGGAAATTAAATTAAAGAAACCGAGAGAAAACCAACTGAAATTTCAAGATTAAAAAACTTAGATTTGATAACAATTTCATTTTTTGTTTTCTATTTTTTAAATTTATGTTTGTTTCTTCACTATTTTTCAATTATGGTTTTCACATTTGTTTAAGAAGCAGTTAAAATTTTAGTCAAATTTTAAAACCAAATATTACTTTTTAAAAATCAAATAATTATCTAACTAAACTTAAAAAAACTATATCCTTGTAATGGGGCTTTTGTTTTCCAAAATTCAATTATATTCTTGATTTGGTATAGAAGTTTTTACATGGCACACTAGTGCTTATCATCAATTTAGTGCGATATATCTTTTCTTTATTTACTAATGATTTCACGAGTTCGTTGGTAATGATTTTACAAGTAGTCCGAGTACGCTAATTTTAAAATTAAAAAGTCAGTTGACAGAAAAATATTTTGGAAGTGGTTTCCCAATTCTCTCCTTAAAAGTCCAAATAACATAAATATTCTATTTTTCTATTTTTATGATATGATTCTATTTTTCCTCCACCTCTTTCTTACACAAGTTACAACAATCATAACGCGTGTGACAGAGCTTTATCGTTGCTGTACTCGCAATGGTTATAGCAACATTCTCCACCGGAATAGACTCCAAATGCTTCCAGGTGCGTTCTTATGCACTCTCAAAAAGCTTTATTTTCATCATTATTATTCCCACAAAAAAAGAACAAAGAAAAAGGGAAAAAGTTAATTGATAAAAGCTGCAGTTCAGGAAGGATGACAAACAGGACGAAGAAGATGATGTCCCATATGGCTATGGTTTTTTCCACTTGGTTTTCGCCACCGGAGCAATGTACTTTGCAATGCTTTTGATTGGTTGGAATACAAATCATCCCATTCGAAAGTACGTTTCCCCCACTCCTACTTTTTTGTCCATTAATTCAGGATTCTTTACAAAAAAGAATAATATAACACATATTTTGAGCTAAATTACAAAAAAAAGAGTACAATTCAACTTTGTCTTTTGTTTAAGAAAATAATAATATATTAGGAAAATTTTTAAAAATTGAAAAATAAGAGAAATTATTTACACAAAATAGTAAAATTTTTAGATAGTTGTGATAAATGTAAATAGAAATCTATTAGAGTCTATCAGTGATAGAAATGATAGAAGTCTATCACTGATAGATGTTGATAGAAGTCTATCAATGTCTATCAGTGTTTTTTTTGCTATTTTTTGTAAATAGTTTGACATTTTTCCTATTTGTAAAAATTTTCCTATTTTTTAATATGAAAGTTGCAATAATATTGATAAACATAAATGTTTCAAAACTATTTTTATTAAGACATTATGTTGAATGTGATTGTGTTAGTGAAATAGAAATTGGGACTCAATCATTATCCATTCACATGGTTTCAATTCACCAACATACCTATTTCAAGTTCTAATTTTCATACTAAATTCTGAAGGATCTTTACTTTAATGGTAGTTTTGAAACATCTATGAAAGGTTTAAAGGTTAATTTGCAACTTTCTGTTTCTTTAAAAAAAAACAAATAATTAAGTTCAAGGAATTTTTTTTTCTTCTTTTTGGGTAATTCAGCCTGTATTTTAATTACGTATCTTAAAATATAATGAATAAAATTCTTGGTTCAAGAAATGATTTTATTGGAAGACAAACACATCTAAATTAACAATAAAAACTTACACAAAATCCACTAAGAGTCACGTCTGCATCTTTTAATGCTTTTTTTTATGACCAATGTCGACATTAAAACGCCAACCAAATCTTGCTGCTATCACTTCTGGAATCCGACTTTAAGTTCCTTCTTTTTATCTTTGTTTCCGTTATTAAAAACCAAGCTTTAGTTGGCCACTAAGTGTTGCCTCCTTTGACTCCTCATGACTTTTGAATCCACTAAACATTTCTTTAATTAGGCAATAAACGCCAACTCGAAGATTCCTATGGACCCTTTTATAAGCGACTCGACATCGACTCAGATTCCAACTAACCCATTAATTAATGCGATAATTCTGGATTTTATTATGGGTTATGTTGAGGATTAAGGGATCAAAAGTTGGATTTGATTTTGTTTGATGGTTAATTTTAAACTCTGCAGGTGGACAATTGACGTCGGATGGACAAGCACTTGGGTTAGGATTGTCAATGAATGGCTCGCTGTCTGTGTTTACCGTAAGTTCTATTTTCTGATGCCGTTTGTCTATATTACTATATTAGGGTGCTATTTTCAACAATAACTTATATCTCTATTTTAAAAAAACAACTGATATCTTTTACTTCTCTTCTTATGAAATTAAGAAAATTCATATTTTAATTAAAGAGTTGTTTTCAAATATAGAAAAATGAGCCAAATTATTTACAAATAGAGAAAAAAAAATTATTGTTTATCAGCGATAAATCGCGATAGAATTCTATCGCTTGATCGCTTGATCGCAGTTTATCACTGACAGTAAAAAATTTATATATTTGTAAATAGTTTATATTTTTTCTATTTATAGTCATTTCTCTTAATTAAACTATCTTTCCATATTTGTATTTAAGATTAGTAATAATTTTAAAAATAAAAAATAAAAAGGAAACAAATTATTACACAACTTAACATGTTTGATTTTCTATTTTTCGAAAATTGAAAACTTAAAAAGTAGTTGATCAGATACGTTTGGTCTTAGAAAATAGAAAACAAGGAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

GGCCCACGTTCCTTTTACCAATGATGAGCAAGAAGCATTCACATTGAGTTGAAGTACTAAATTTGTTGCAAGGAGAGTCCACCAACCCTTTCCAATTCTCGCCACCATTCCGCCGCGGGCACCACCAACCACCTGCAACTCATGAATAAAACTGAAGATCCGTTCCACCTTTGAGACAATCTAAAAGATAGGCAACTGCTGATTCACCAAATTTCTGTCAGACCAAAGAGCCCAACATTCCATACAAAACAACACCATATCCGAACTCGAGAGGTTGTCAACCAGACCCACACACACCTCCATAATAGACCGCCTTCAGAAAGCCAAATTCAAAACGGAAGGAACCAATGTTTGTCACAGACTTTAGTTCTCTTACATCTAATAAAGTTTAAAGCTGAAATTTACTTCATAAGTTTGGACGTCACGAGAAGAAAGAGAGCTGAAGCGAAAAGAAGAAGCTTACGGCGGGAAAAAGAAACAGCACAAAGCAAACCTTCCTAAAAGCAATCTCTCTCTCTCTCGTTCATATTATATAATTCAACTCCCAAAAATCTTGAGCAAATTCCAGATTCTCTCTCTGCTTCCTTTCTTCGATCCGGAGGGATTTTGTGCAGAATTTATCCGGAGGAAGAAGGCGAACATCCACCTTTTCTGCACTAACATTTTCAATCTCTTCAATCTCCTCTTCTTGAGTTCGGTAACTGGATCCGTTGCAGGGAAGAGAAGCAAGCAGTGGTGAAAACCCAGTTTGATTCTATATACTATACAACGAGTAATGGATGAAATGTAGCCTCCCTTAAGTAGACATGGAGACTAGCGGCGGAGGAAGCTCCGATGAGGGTCGCCGCATATTCAAGGCTGATACATGGTTTAGCCAATTTCGCAATGGGTCCAATCCTTGGATGGCAAGATATATTTATGCTTTAATGTTTCTAATTGCTAATCTGTTGGCATGGGCTGTCCGGGATTATGGCCGTGGCGCATTGACGGAGATGGAAAGATTAAAAGGATGTCACGGGGCGCGTGATTGTCTAGGTGCTGAAGGAGTTCTCCGTATATTTTATTTCACCATGTTTCTTTCTACAACCGGCACTTCAAAGATGCGAGGACGCAGAAGTACTTGGCATTCTGGATGGTGGTCTGCGAAGATTATCTTATGGATTGCCTTCATAATCATCCCCTTTGTGCTTCCTGCCACCGTTATTCGGCTATATGGGGACGTTGCACATTTTGGTGCCGGGGTCTTTCTCCTGATTCAGCTTGTAAGCGTGATAAGCTTTATAACATGGTTGAATGATTGTTGTCAATCCGACAAGCCTGCAGACAGATGGTGTGAATCAAATACACATCATGTTACTTGCAACAATGGCATATGTCATCTGTTTAGTGGGAATCATTTCGATGTACATATGGTATGTGCCTCAGCCGACTTGTCTTCTCAATATATTTTTCATTACGTGGACACTGGTACTACTCCAACTCATGACCAGCGTTTCTCTCCATCCAAAAGTGAATGCTGGCATCTTAACTCCGGGTCTGATGGGGCTGTACATAGTATTTATTTGCTGGTGTGCCATTCGGAGGCTTTTAAGAATTTTGGGAATGCTGCTAATGAACCAGGGGGAGGAAAGTGTGTTAGAAATGCAGAGACTTCAACCAAAACCGACTGGCTTACCATTATAAGCTTTATCGTTGCTGTACTCGCAATGGTTATAGCAACATTCTCCACCGGAATAGACTCCAAATGCTTCCAGGTGCGTTCTTATGCACTCTCAAAAAGCTTTATTTTCATCATTATTATTCCCACAAAAAAAGAACAAAGAAAAAGGGAAAAATTCAGGAAGGATGACAAACAGGACGAAGAAGATGATGTCCCATATGGCTATGGTTTTTTCCACTTGGTTTTCGCCACCGGAGCAATGTACTTTGCAATGCTTTTGATTGGTTGGAATACAAATCATCCCATTCGAAAGTGGACAATTGACGTCGGATGGACAAGCACTTGGGTTAGGATTGTCAATGAATGGCTCGCTGTCTGTGTTTACCTATGGATGCTGGTGGCTCCAGTGATATGGAAGAATAGGCAAATGGTGGTAGGAGCTGTATGAGTAAACAAACCCTCATTCATTCAATGCGTGGCTCCAGAATTCCTTGTTGATTGAATTGTATTGGATTTGGAGCGACTGCAAAATTCAAAACATGTAATATCCAAAAGCCTAATTTTATTTTGTTTTTTGATGATTTAATTTGTTCCACAAATAGAAATGGGAAAAAAGGTGTAATCCCATATAAGATTACCTCATTTGTAAATATATAGCAGCTTATTAAGCTTATTAACCAACAGGCCCAACTTATTATGAAATTAGAATATTAAATAAATTATAAATAAATAAATAAATGACCCACCTGTTTGACTGATTGATTAAATAACCAACTCGTAGCAAACCAATATAAAGGTTAAATTACAAATTTAGCCGTTGCTGTTTTGAAGTTTGATAAAATTTCATAAATAGTCCCCTATGGTTTGTTCATAAATAGTTTCTAACATAGTAATTATTTACAAATATTTTATCAAACTATAAAAACTAAATTCTAATTATAAACTATGTG

Coding sequence (CDS)

ATGGAGACTAGCGGCGGAGGAAGCTCCGATGAGGGTCGCCGCATATTCAAGGCTGATACATGGTTTAGCCAATTTCGCAATGGGTCCAATCCTTGGATGGCAAGATATATTTATGCTTTAATGTTTCTAATTGCTAATCTGTTGGCATGGGCTGTCCGGGATTATGGCCGTGGCGCATTGACGGAGATGGAAAGATTAAAAGGATGTCACGGGGCGCGTGATTGTCTAGGTGCTGAAGGAGTTCTCCGTATATTTTATTTCACCATGTTTCTTTCTACAACCGGCACTTCAAAGATGCGAGGACGCAGAAGTACTTGGCATTCTGGATGGTGGTCTGCGAAGATTATCTTATGGATTGCCTTCATAATCATCCCCTTTGTGCTTCCTGCCACCGTTATTCGGCTATATGGGGACGTTGCACATTTTGGTGCCGGGGTCTTTCTCCTGATTCAGCTTGTAAGCGTGATAAGCTTTATAACATGGTTGAATGATTGTTGTCAATCCGACAAGCCTGCAGACAGATGGTGTGAATCAAATACACATCATGTTACTTGCAACAATGGCATATGTCATCTGTTTAGTGGGAATCATTTCGATGTACATATGGTATGTGCCTCAGCCGACTTGTCTTCTCAATATATTTTTCATTACGTGGACACTGGTACTACTCCAACTCATGACCAGCGTTTCTCTCCATCCAAAAGTGAATGCTGGCATCTTAACTCCGGGTCTGATGGGGCTGTACATAGTATTTATTTGCTGGTGTGCCATTCGGAGGCTTTTAAGAATTTTGGGAATGCTGCTAATGAACCAGGGGGAGGAAAGTGTGTTAGAAATGCAGAGACTTCAACCAAAACCGACTGGCTTACCATTATAAGCTTTATCGTTGCTGTACTCGCAATGGTTATAGCAACATTCTCCACCGGAATAGACTCCAAATGCTTCCAGGTGCGTTCTTATGCACTCTCAAAAAGCTTTATTTTCATCATTATTATTCCCACAAAAAAAGAACAAAGAAAAAGGGAAAAATTCAGGAAGGATGACAAACAGGACGAAGAAGATGATGTCCCATATGGCTATGGTTTTTTCCACTTGGTTTTCGCCACCGGAGCAATGTACTTTGCAATGCTTTTGATTGGTTGGAATACAAATCATCCCATTCGAAAGTGGACAATTGACGTCGGATGGACAAGCACTTGGGTTAGGATTGTCAATGAATGGCTCGCTGTCTGTGTTTACCTATGGATGCTGGTGGCTCCAGTGATATGGAAGAATAGGCAAATGGTGGTAGGAGCTGTATGA

Protein sequence

METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGALTEMERLKGCHGARDCLGAEGVLRIFYFTMFLSTTGTSKMRGRRSTWHSGWWSAKIILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADRWCESNTHHVTCNNGICHLFSGNHFDVHMVCASADLSSQYIFHYVDTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV

Homology

[Close]

BLAST of Lsi11G002720 vs. Swiss-Prot
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-09
Identity = 46/172 (26.74%), Postives = 75/172 (43.60%), Query Frame = 1


Query: 266 NAANEPGGGKCVRNAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKS 325
           +A N    G C  N  +S K   + II  +  ++++  + F +   ++     ++  S  
Sbjct: 257 SAINSEPPGTCSSNNTSSPKESTI-IIGAVFTIISVCYSAFRSSDSTELLGNHNHYSS-- 316

Query: 326 FIFIIIIPTKKEQRKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGW---- 385
                 IPT                DE +   Y Y FFH  FA GAMY + LL  W    
Sbjct: 317 ------IPTDPNAETTGV-----ADDECECTAYNYSFFHFTFACGAMYLSALLTNWATMT 376

Query: 386 -------NTNHPIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIWKNR 427
                  +T+      ++D G  S WV++V+ W+ V +YLW L+ P++ +NR
Sbjct: 377 STDITSSSTSSSNSTISVDSGMVSVWVKVVSSWVVVLLYLWTLIGPILLRNR 414

[Close]

BLAST of Lsi11G002720 vs. Swiss-Prot
Match: SERC1_BOVIN (Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 1


Query: 351 DEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAV 410
           +E D V Y Y FFH +    ++Y  M L  W    P R+      WT+ WV+I + W+ +
Sbjct: 377 NERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQ--WTAVWVKISSSWIGI 436

Query: 411 CVYLWMLVAPVIWKNR 427
            +Y+W LVAP++  NR
Sbjct: 437 VLYVWTLVAPLVLTNR 450

[Close]

BLAST of Lsi11G002720 vs. Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 1


Query: 351 DEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAV 410
           +E D V Y Y FFH +    ++Y  M L  W    P R+      WT+ WV+I + W+ +
Sbjct: 377 NERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQ--WTAVWVKISSSWIGI 436

Query: 411 CVYLWMLVAPVIWKNR 427
            +Y+W LVAP++  NR
Sbjct: 437 VLYVWTLVAPLVLTNR 450

[Close]

BLAST of Lsi11G002720 vs. Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 1


Query: 351 DEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAV 410
           +E D V Y Y FFH +    ++Y  M L  W    P R+      WT+ WV+I + W+ +
Sbjct: 377 NERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQ--WTAVWVKISSSWIGI 436

Query: 411 CVYLWMLVAPVIWKNR 427
            +Y+W LVAP++  NR
Sbjct: 437 VLYVWTLVAPLVLTNR 450

[Close]

BLAST of Lsi11G002720 vs. Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-09
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 1


Query: 351 DEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAV 410
           +E D V Y Y FFH +    ++Y  M L  W    P R+      WT+ WV+I + W+ +
Sbjct: 377 NERDGVTYSYSFFHFMLFLASLYIMMTLTNWYRYEPSREMKSQ--WTAVWVKISSSWIGI 436

Query: 411 CVYLWMLVAPVIWKNR 427
            +Y+W LVAP++  NR
Sbjct: 437 VLYVWTLVAPLVLTNR 450

[Close]

BLAST of Lsi11G002720 vs. TrEMBL
Match: A0A0A0LF26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005270 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 4.7e-168
Identity = 323/455 (70.99%), Postives = 339/455 (74.51%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL
Sbjct: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEMERLKGCHGARDCLGAEGVLR      IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK
Sbjct: 61  TEMERLKGCHGARDCLGAEGVLRVSLGCFIFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           IILW+AFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR
Sbjct: 121 IILWVAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C+      +   +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CQIHIMLLATMAYVICLVGIISMYIWYVPQPTCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ +++  C            +EPGGGKCVR
Sbjct: 241 DAGI-----------------LTPGLMG-LYIVFICWC---------AIRSEPGGGKCVR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
           NA++S KTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ                      
Sbjct: 301 NADSSNKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ---------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
                FRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS
Sbjct: 361 -----FRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 400

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 434
           TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV
Sbjct: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 400

[Close]

BLAST of Lsi11G002720 vs. TrEMBL
Match: M1TDA1_9ROSI (Maternal effect embryo arrest 55-1 OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 5.8e-126
Identity = 252/437 (57.67%), Postives = 293/437 (67.05%), Query Frame = 1


Query: 5   GGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGALTEME 64
           G GSS+E +  FK D+WFSQFRNGSNPWMARY+Y L+FL ANLLAWAVRDYGRGALTEME
Sbjct: 4   GAGSSNERQAGFKEDSWFSQFRNGSNPWMARYVYGLIFLAANLLAWAVRDYGRGALTEME 63

Query: 65  RLKGCHGARDCLGAEGVLRI------FYFTMFLSTTGTSKMRGRRSTWHSGWWSAKIILW 124
           RLK C G  DCLGAEGVLR+      FYF MF ST GTSK+   R +WHSGWWSAKI+LW
Sbjct: 64  RLKNCKGGHDCLGAEGVLRVSLGCFVFYFLMFFSTAGTSKLYESRDSWHSGWWSAKIVLW 123

Query: 125 IAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADRWCE- 184
           IA  +IPF++P++ I++YGD+AHFGAGVFLLIQL+SVISFI WLNDCC S+K A R C  
Sbjct: 124 IALTVIPFLIPSSFIQIYGDIAHFGAGVFLLIQLISVISFINWLNDCCLSEKNAAR-CHI 183

Query: 185 -----SNTHHVTCNNGICHLFSGNHFDVHMVCASADLSSQYIFHYVDTGTTPTHDQRFSP 244
                +   +VTC  GI  ++         +  + D S      ++ T T        S 
Sbjct: 184 HVMLIATVAYVTCIVGIIMMY---------IWYTPDPSCLLNIFFI-TWTLVLLQLMTSV 243

Query: 245 S---KSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAETSTKTDWL 304
           S   K     L  G  G ++ +++  C   +         EP G  C R AE S +TDWL
Sbjct: 244 SLHPKVNAGFLTPGLMG-LYVVFICWCAIRS---------EPVGENCNRKAEASNRTDWL 303

Query: 305 TIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDK 364
           TIISFIVA+LAMVIATFSTGIDSKCFQ+R                           KDD 
Sbjct: 304 TIISFIVALLAMVIATFSTGIDSKCFQLR---------------------------KDDS 363

Query: 365 QDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLA 424
              EDDVPYGYGFFHLVFATGAMYFAMLLIGWNT+H ++KWTIDVGWTSTWVRIVNEWLA
Sbjct: 364 P-AEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTHHAMKKWTIDVGWTSTWVRIVNEWLA 391

Query: 425 VCVYLWMLVAPVIWKNR 427
           VCVY+WMLVAPVI K+R
Sbjct: 424 VCVYIWMLVAPVILKHR 391

[Close]

BLAST of Lsi11G002720 vs. TrEMBL
Match: D7TBR4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04200 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.2e-125
Identity = 250/446 (56.05%), Postives = 291/446 (65.25%), Query Frame = 1


Query: 3   TSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGALTE 62
           +SG G   EG +    ++WFSQFRN  NPWMARY+Y LMFLI NLLAWAVRDYGRGALTE
Sbjct: 6   SSGNGRHPEGMK----ESWFSQFRNSPNPWMARYVYGLMFLITNLLAWAVRDYGRGALTE 65

Query: 63  MERLKGCHGARDCLGAEGVLRI------FYFTMFLSTTGTSKMRGRRSTWHSGWWSAKII 122
           MERL+GC G RDCLGAEGVLR+      FYF MFLST GTSK+   R  WHSGWWSAKII
Sbjct: 66  MERLQGCKGVRDCLGAEGVLRVSLGCFTFYFIMFLSTAGTSKLHKPRELWHSGWWSAKII 125

Query: 123 LWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADRWC 182
           LW+A +++PF++P+  I+LYG++AHFGAGVFLLIQL+S+ISFI WLNDCC S K ADR C
Sbjct: 126 LWVALMMLPFLVPSAFIQLYGEIAHFGAGVFLLIQLISIISFIKWLNDCCHSGKYADR-C 185

Query: 183 E------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFHYVDTG 242
                  + T +V C  GI  ++           N F +        L +    H     
Sbjct: 186 RIHVMLLATTAYVICIMGIILMYIWYVPEPSCLLNIFFITWTLVLLQLMTSVSLH----- 245

Query: 243 TTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAE 302
             P  D+ F         L  G  G ++ ++L  C   +         EP   +C +  E
Sbjct: 246 --PKVDESF---------LTPGLMG-LYVVFLCWCAIRS---------EPPEDRCNQKVE 305

Query: 303 TSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKR 362
           ++TK DWLTIISFIVA+LAMVIATFSTGIDSKCFQ                         
Sbjct: 306 SATKADWLTIISFIVALLAMVIATFSTGIDSKCFQ------------------------- 365

Query: 363 EKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWV 422
             FRKDD Q  EDDVPYGYGFFH VFATGAMYF+MLLIGWNT+H IRKWTIDVGWTSTWV
Sbjct: 366 --FRKDDTQ-AEDDVPYGYGFFHFVFATGAMYFSMLLIGWNTHHSIRKWTIDVGWTSTWV 392

Query: 423 RIVNEWLAVCVYLWMLVAPVIWKNRQ 428
           RIVNEWLA CVYLWMLVAP+IWK+RQ
Sbjct: 426 RIVNEWLAACVYLWMLVAPIIWKSRQ 392

[Close]

BLAST of Lsi11G002720 vs. TrEMBL
Match: K7KRM5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G232100 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.4e-124
Identity = 243/448 (54.24%), Postives = 290/448 (64.73%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           ME     S +E R I K  +W SQFRN SNPWMARY YAL+FL+ANLLAWA RDYGRGAL
Sbjct: 1   MEVGESNSGNERRIISKDSSWCSQFRNASNPWMARYAYALIFLVANLLAWAARDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEM+RLKGC+G +DCL AEGVLR      IFY  MFLST  TSK+   R TWHSGWWS K
Sbjct: 61  TEMKRLKGCNGGKDCLDAEGVLRVNLGCFIFYIIMFLSTARTSKLNNVRDTWHSGWWSVK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           I LW+   +IPF+LP+  I++YG+VAHFGAGVFLLIQL+S+ISFITWLN+CC+S+K A R
Sbjct: 121 IALWVVTTVIPFLLPSEFIQIYGEVAHFGAGVFLLIQLISIISFITWLNECCESEKFAAR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C       + T +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CRIHVMFFATTAYVVCLMGIILMYIWYAPKPSCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ ++L  C            +EP GG C+R
Sbjct: 241 DAGI-----------------LTPGLMG-LYVVFLCWC---------AIRSEPAGGNCIR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
            ++++TKTDWL+IISF+VA+LA+VIATFSTGIDSKCFQ                      
Sbjct: 301 KSDSATKTDWLSIISFVVAILAIVIATFSTGIDSKCFQ---------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
                FRKDD    +DDVPYGYGFFH VFATGAMYFAMLLIGWN++H +RKWTIDVGWTS
Sbjct: 361 -----FRKDDTPPAQDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKWTIDVGWTS 393

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNR 427
           TWVRIVNEWLAVCVYLWML+AP+IWK+R
Sbjct: 421 TWVRIVNEWLAVCVYLWMLIAPIIWKSR 393

[Close]

BLAST of Lsi11G002720 vs. TrEMBL
Match: K7L4U1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G039500 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.7e-123
Identity = 243/449 (54.12%), Postives = 287/449 (63.92%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           ME     S +E R I K  +W SQFRN SNPWMARY YAL+FL+ANLLAWA RDYGRGAL
Sbjct: 1   MEAGESNSGNERRIISKDSSWCSQFRNASNPWMARYAYALIFLVANLLAWAARDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEM+R KGC+G +DCL AEGVLR      IFY  MFLST  TSK+   R TWHSGWWS K
Sbjct: 61  TEMKRFKGCNGGKDCLDAEGVLRVSLGCFIFYIIMFLSTARTSKLNNLRDTWHSGWWSVK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           I LW+    IPF+LP   I++YG+VAHFGAGVFLLIQL+S+ISFITWLN+C +S+K A R
Sbjct: 121 IALWVVTTAIPFLLPTEFIQIYGEVAHFGAGVFLLIQLISIISFITWLNECSESEKFASR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C       + T +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CRIHVMFFATTAYVVCLMGIILMYIWYSPKPSCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ ++L  C            +EP GG C+R
Sbjct: 241 DAGI-----------------LTPGLMG-LYVVFLCWC---------AIRSEPAGGNCIR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
            ++++TKTDWL+IISF+VA+LA+VIATFSTGIDSKCFQ                      
Sbjct: 301 KSDSATKTDWLSIISFVVAILAIVIATFSTGIDSKCFQ---------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
                FRKDD    EDDVPYGYGFFH VFATGAMYFAMLLIGWN++H +RKWTIDVGWTS
Sbjct: 361 -----FRKDDTAPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKWTIDVGWTS 394

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQ 428
           TWV+IVNEWLAVCVYLWML+AP+IWKNRQ
Sbjct: 421 TWVKIVNEWLAVCVYLWMLIAPIIWKNRQ 394

[Close]

BLAST of Lsi11G002720 vs. TAIR10
Match: AT3G24460.1 (AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 417.9 bits (1073), Expect = 7.5e-117
Identity = 222/432 (51.39%), Postives = 271/432 (62.73%), Query Frame = 1


Query: 17  KADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGALTEMERLKGCHGARDCL 76
           K  +WF+QFRNG NPWMARY+Y L+FLIANLLAWA RDYGRGAL ++ R K C G  +CL
Sbjct: 23  KNGSWFNQFRNGCNPWMARYVYGLIFLIANLLAWAARDYGRGALRKVTRFKNCKGGENCL 82

Query: 77  GAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAKIILWIAFIIIPFVLPA 136
           G +GVLR      +FYF MFLST GTSK    R  WHSGWW  K+I+W A  IIPF+LP+
Sbjct: 83  GTDGVLRVSLGCFLFYFVMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPS 142

Query: 137 TVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADRWCE------SNTHHVT 196
           ++I LYG++AHFGAGVFLLIQL+SVISFI WLN+C QS K A+R C       S T +  
Sbjct: 143 SIIHLYGEIAHFGAGVFLLIQLISVISFIQWLNECYQSQKDAER-CRVYVMLLSTTSYTV 202

Query: 197 CNNGICHLFSG---------NHFDVHMVCASADLSSQYIFHYVDTGTTPTHDQRFSPSKS 256
           C  G+  ++           N F +        L +    H                 K 
Sbjct: 203 CIVGVILMYIWYAPDSSCLLNIFFITWTLFLIQLMTSIALH----------------PKV 262

Query: 257 ECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAETSTKTDWLTIISFI 316
              +L     G ++ +++  C            +EP G  C R A  S +TDWLTIISF+
Sbjct: 263 NAGYLTPALMG-LYVVFICWC---------AIRSEPVGESCNRKAAASNRTDWLTIISFV 322

Query: 317 VAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDKQDEEDD 376
           VA+LAMVIATFSTGIDS+CFQ +                        K   D +++ EDD
Sbjct: 323 VALLAMVIATFSTGIDSQCFQFK------------------------KDENDQEEEAEDD 382

Query: 377 VPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAVCVYLW 428
           VPYGYGFFH VFATGAMYFAMLLIGWNT+HP++KWTIDVGWTSTWVR+VNEWLAVCVY+W
Sbjct: 383 VPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVYIW 403

[Close]

BLAST of Lsi11G002720 vs. TAIR10
Match: AT2G33205.1 (AT2G33205.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 256.5 bits (654), Expect = 2.9e-68
Identity = 164/416 (39.42%), Postives = 220/416 (52.88%), Query Frame = 1


Query: 34  ARYIYALMFLIANLLAWAVRDYGRGALTEMERLKGC--HGARDCLGAEGVLR------IF 93
           ARY Y  +FLI NL AW +RDY + AL  +  +  C   G+R C    GVLR      IF
Sbjct: 49  ARYTYGTIFLIINLCAWFIRDYAQKALALLPYVSSCGPEGSR-CFHTLGVLRVSLGCFIF 108

Query: 94  YFTMFLSTTGTSKMRGRRSTWHSGWWSAKIILWIAFIIIPFVLPATVIRLYGDVAHFGAG 153
           YF MFLST  T K+   +++WHS  W  K  L +  ++  F +P   I++YG++A  GAG
Sbjct: 109 YFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIPQLYIQIYGEIARVGAG 168

Query: 154 VFLLIQLVSVISFITWLNDCCQSDKPADRWCESNTHHVTCNNGICHLFSGNHFDVHMVCA 213
           +FL +QLVSVI FITW N         + W   N    +C+ G   L     F +  VC 
Sbjct: 169 IFLGLQLVSVIEFITWWN---------NYWMPQNQSKQSCSFG---LVMSIVFYIGSVCG 228

Query: 214 SADLSSQYIFHYVDTGTTPTHDQRFSPS--------------KSECWHLNSGSDGAVHSI 273
            A      + +Y    +T      F  S               S+  +    S G + S 
Sbjct: 229 IA------VMYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNRGLLSSGIMASY 288

Query: 274 YLLVCHSEAFKNFGNAANEPGGGKCVRNAET-STKTDWLTIISFIVAVLAMVIATFSTGI 333
            + +C S          +EP   KC  NA T ++ TDW TI+SF++A+ A+V+ATFSTGI
Sbjct: 289 IVFLCWSA-------IRSEPSHTKC--NAHTQNSHTDWTTILSFLIAIGAIVMATFSTGI 348

Query: 334 DSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDKQDEEDDVPYGYGFFHLVFATG 393
           DS+ F                           +FRKD+ + EEDD+PY YGFFHLVF+ G
Sbjct: 349 DSESF---------------------------RFRKDEAK-EEDDIPYSYGFFHLVFSLG 408

Query: 394 AMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVIWKNR 427
           AMYFAML I WN +H   KW+IDVGWTSTWV+IVNEW A  +YLW L+AP++ ++R
Sbjct: 409 AMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVNEWFAAAIYLWKLIAPIVRQHR 408

[Close]

BLAST of Lsi11G002720 vs. TAIR10
Match: AT4G13345.1 (AT4G13345.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 231.9 bits (590), Expect = 7.6e-61
Identity = 109/180 (60.56%), Postives = 132/180 (73.33%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           MET G    + G    K  +WF QFRNG NPWMARY+Y L+FL+ANLLAWA+RDYGRGAL
Sbjct: 1   MET-GTSIDNTGYEGIKNGSWFIQFRNGCNPWMARYVYGLIFLLANLLAWALRDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLRI------FYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEM + K C    DCLG EGVLR+      FYF MFLST GTSK    R  WHSGWW AK
Sbjct: 61  TEMRKFKNCKEGGDCLGTEGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 175
           + + +   I PF+LP+++I+ YG++AHFGAGVFLLIQL+S+ISFITWLN+C Q+ K A+R
Sbjct: 121 LFMLLGLTIFPFLLPSSIIQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAER 179

[Close]

BLAST of Lsi11G002720 vs. TAIR10
Match: AT1G16180.1 (AT1G16180.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 126.3 bits (316), Expect = 4.5e-29
Identity = 108/426 (25.35%), Postives = 179/426 (42.02%), Query Frame = 1


Query: 34  ARYIYALMFLIANLLAWAVRDYGRGALTEMERLKGCHGA--RDCLGAEGVLRI----FYF 93
           AR  Y  +F ++ +++W +R+     + ++  +   H    R+    + VLR+    F F
Sbjct: 31  ARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAVLRVSLGNFLF 90

Query: 94  TMFLSTT--GTSKMRGRRSTWHSGWWSAKIILWIAFIIIPFVLPATVIRLYGDVAHFGAG 153
              LS    G    +  R   H G W  KII W   +I  F LP  +I  Y  ++ FGAG
Sbjct: 91  FSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIISFYESMSKFGAG 150

Query: 154 VFLLIQLVSVISFITWLNDCCQSDKPADRWCESNTHHVTCNNGICHLFSGNHFDVHMVCA 213
            FLL+Q+V ++ F+   N         D W   +             +      V +VC 
Sbjct: 151 FFLLVQVVLLLDFVHGWN---------DTWVGYDE----------QFWYAALLVVSLVCY 210

Query: 214 SAD-LSSQYIFHYVDTGTTPTHDQRFSPSKSEC---------------------WHLNSG 273
            A  + S ++FH+            F+PS  +C                      H   G
Sbjct: 211 LATFVFSGFLFHW------------FTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVG 270

Query: 274 SDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKC--VRNAETSTKTDWLTIISFIVAVLAM 333
                 S+  L C    +  +   A+EP   +C  + N   +  T  +T I  +  VL++
Sbjct: 271 GSILPASVISLYC---MYLCYSGLASEPRDYECNGLHNHSKAVSTGTMT-IGLLTTVLSV 330

Query: 334 VIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDKQDEEDDVPYGYG 393
           V +    G  +          ++  +  I      + +  EK  K++K+     V Y Y 
Sbjct: 331 VYSAVRAGSSTTLLSPPDSPRAEKPLLPI------DGKAEEKEEKENKK----PVSYSYA 390

Query: 394 FFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPV 428
           FFH++F+  +MY AMLL GW+T+       +DVGW S WVR+V  W    +++W LVAP+
Sbjct: 391 FFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSWATAGLFIWSLVAPI 411

[Close]

BLAST of Lsi11G002720 vs. TAIR10
Match: AT3G06170.1 (AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-14
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1


Query: 346 KDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVN 405
           K   + E   V Y Y FFH++FA  +MY AMLL GW T+       IDVGWTS WV+I  
Sbjct: 327 KKSGEAEARPVSYSYSFFHIIFALASMYAAMLLSGW-TDSSESATLIDVGWTSVWVKICT 386

Query: 406 EWLAVCVYLWMLVAPVIWKNRQ 428
            W+   +Y+W L+AP+I  +R+
Sbjct: 387 GWVTAGLYIWTLIAPLILPDRE 407

[Close]

BLAST of Lsi11G002720 vs. NCBI nr
Match: gi|659071120|ref|XP_008458214.1| (PREDICTED: probable serine incorporator isoform X1 [Cucumis melo])

HSP 1 Score: 604.0 bits (1556), Expect = 2.1e-169
Identity = 326/455 (71.65%), Postives = 341/455 (74.95%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL
Sbjct: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEMERLKGCHGARDCLGAEGVLR      IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK
Sbjct: 61  TEMERLKGCHGARDCLGAEGVLRVSLGCFIFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           IILWIAFIIIPFVLPAT+IRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR
Sbjct: 121 IILWIAFIIIPFVLPATIIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C+      S   +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CQIHIMLLSTMAYVICLVGIISMYIWYVPQPTCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ +++  C   +         EPGGGKCVR
Sbjct: 241 DAGI-----------------LTPGLMG-LYIVFICWCAIRS---------EPGGGKCVR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
           NAETS KTDWLTIISFIVAVLAMVIATFSTGIDSKCFQV                     
Sbjct: 301 NAETSNKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQV--------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
               +FRKDDKQDE+DDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS
Sbjct: 361 ----QFRKDDKQDEDDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 402

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 434
           TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV
Sbjct: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 402

[Close]

BLAST of Lsi11G002720 vs. NCBI nr
Match: gi|659071122|ref|XP_008458224.1| (PREDICTED: probable serine incorporator isoform X2 [Cucumis melo])

HSP 1 Score: 601.7 bits (1550), Expect = 1.0e-168
Identity = 325/455 (71.43%), Postives = 339/455 (74.51%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL
Sbjct: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEMERLKGCHGARDCLGAEGVLR      IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK
Sbjct: 61  TEMERLKGCHGARDCLGAEGVLRVSLGCFIFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           IILWIAFIIIPFVLPAT+IRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR
Sbjct: 121 IILWIAFIIIPFVLPATIIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C+      S   +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CQIHIMLLSTMAYVICLVGIISMYIWYVPQPTCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ +++  C            +EPGGGKCVR
Sbjct: 241 DAGI-----------------LTPGLMG-LYIVFICWC---------AIRSEPGGGKCVR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
           NAETS KTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ                      
Sbjct: 301 NAETSNKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ---------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
                FRKDDKQDE+DDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS
Sbjct: 361 -----FRKDDKQDEDDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 400

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 434
           TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV
Sbjct: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 400

[Close]

BLAST of Lsi11G002720 vs. NCBI nr
Match: gi|449443319|ref|XP_004139427.1| (PREDICTED: probable serine incorporator isoform X1 [Cucumis sativus])

HSP 1 Score: 599.0 bits (1543), Expect = 6.7e-168
Identity = 323/455 (70.99%), Postives = 339/455 (74.51%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL
Sbjct: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLR------IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TEMERLKGCHGARDCLGAEGVLR      IFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK
Sbjct: 61  TEMERLKGCHGARDCLGAEGVLRVSLGCFIFYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           IILW+AFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR
Sbjct: 121 IILWVAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180

Query: 181 WCE------SNTHHVTCNNGICHLFSG---------NHFDVHMVCASADLSSQYIFH-YV 240
            C+      +   +V C  GI  ++           N F +        L +    H  V
Sbjct: 181 -CQIHIMLLATMAYVICLVGIISMYIWYVPQPTCLLNIFFITWTLVLLQLMTSVSLHPKV 240

Query: 241 DTGTTPTHDQRFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVR 300
           D G                  L  G  G ++ +++  C            +EPGGGKCVR
Sbjct: 241 DAGI-----------------LTPGLMG-LYIVFICWC---------AIRSEPGGGKCVR 300

Query: 301 NAETSTKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQ 360
           NA++S KTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ                      
Sbjct: 301 NADSSNKTDWLTIISFIVAVLAMVIATFSTGIDSKCFQ---------------------- 360

Query: 361 RKREKFRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 420
                FRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS
Sbjct: 361 -----FRKDDKQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTS 400

Query: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 434
           TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV
Sbjct: 421 TWVRIVNEWLAVCVYLWMLVAPVIWKNRQMVVGAV 400

[Close]

BLAST of Lsi11G002720 vs. NCBI nr
Match: gi|1009160439|ref|XP_015898350.1| (PREDICTED: probable serine incorporator [Ziziphus jujuba])

HSP 1 Score: 464.9 bits (1195), Expect = 1.5e-127
Identity = 253/439 (57.63%), Postives = 296/439 (67.43%), Query Frame = 1


Query: 1   METSGGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGAL 60
           ME S   +S+E R   K ++WFSQFRNGSNPWMARY+YALMFL+ANLLAWAVRDYGR AL
Sbjct: 1   MEGSSRSNSNEWRGSIKDNSWFSQFRNGSNPWMARYVYALMFLLANLLAWAVRDYGRSAL 60

Query: 61  TEMERLKGCHGARDCLGAEGVLRI------FYFTMFLSTTGTSKMRGRRSTWHSGWWSAK 120
           TE++RL+GC GA+DCLGAEGVLR+      FYFTMFL+T GTSK+   R +W SGWW AK
Sbjct: 61  TEVQRLEGCQGAKDCLGAEGVLRVSLGCCTFYFTMFLTTAGTSKLNEPRDSWQSGWWFAK 120

Query: 121 IILWIAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADR 180
           I+LW+AF IIPF+LP+ VI+LYGDVAHFGAGVFLLIQL+SVISFITWLND CQS+K A+R
Sbjct: 121 IVLWVAFTIIPFLLPSAVIQLYGDVAHFGAGVFLLIQLISVISFITWLNDWCQSEKHAER 180

Query: 181 WCE------SNTHHVTCNNGICHLFSGNHFDVHMVCASADLSSQYIFHYVDTGTTPTHDQ 240
            C+      + T +V C  GI          + M    A   S  +  +  T T      
Sbjct: 181 -CQIQAMLVATTAYVVCIVGI----------IMMYIWYAPEPSCLLNIFFITWTLVLLQL 240

Query: 241 RFSPSKSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAETSTKTDW 300
             S S     +    + G +    + +C       +    +EP G  C   AE S KTDW
Sbjct: 241 MTSVSLHPKVNAGILTPGLMGLYIVFIC-------WCAIRSEPAGENCNMKAEASNKTDW 300

Query: 301 LTIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDD 360
           LTIISF+VAVLAMVIATFSTGIDS+CFQ                           FRK D
Sbjct: 301 LTIISFVVAVLAMVIATFSTGIDSQCFQ---------------------------FRK-D 360

Query: 361 KQDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWL 420
           K   EDDVPYGYGFFH VFATGAMYFAMLLIGWNT+H ++KWTIDVGWTSTWVR+VNEWL
Sbjct: 361 KIVSEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHAMKKWTIDVGWTSTWVRVVNEWL 393

Query: 421 AVCVYLWMLVAPVIWKNRQ 428
           AVCVYLWMLVAP+IWK+ Q
Sbjct: 421 AVCVYLWMLVAPIIWKSSQ 393

[Close]

BLAST of Lsi11G002720 vs. NCBI nr
Match: gi|452916776|gb|AGG19193.1| (maternal effect embryo arrest 55-1, partial [Dimocarpus longan])

HSP 1 Score: 459.1 bits (1180), Expect = 8.3e-126
Identity = 252/437 (57.67%), Postives = 293/437 (67.05%), Query Frame = 1


Query: 5   GGGSSDEGRRIFKADTWFSQFRNGSNPWMARYIYALMFLIANLLAWAVRDYGRGALTEME 64
           G GSS+E +  FK D+WFSQFRNGSNPWMARY+Y L+FL ANLLAWAVRDYGRGALTEME
Sbjct: 4   GAGSSNERQAGFKEDSWFSQFRNGSNPWMARYVYGLIFLAANLLAWAVRDYGRGALTEME 63

Query: 65  RLKGCHGARDCLGAEGVLRI------FYFTMFLSTTGTSKMRGRRSTWHSGWWSAKIILW 124
           RLK C G  DCLGAEGVLR+      FYF MF ST GTSK+   R +WHSGWWSAKI+LW
Sbjct: 64  RLKNCKGGHDCLGAEGVLRVSLGCFVFYFLMFFSTAGTSKLYESRDSWHSGWWSAKIVLW 123

Query: 125 IAFIIIPFVLPATVIRLYGDVAHFGAGVFLLIQLVSVISFITWLNDCCQSDKPADRWCE- 184
           IA  +IPF++P++ I++YGD+AHFGAGVFLLIQL+SVISFI WLNDCC S+K A R C  
Sbjct: 124 IALTVIPFLIPSSFIQIYGDIAHFGAGVFLLIQLISVISFINWLNDCCLSEKNAAR-CHI 183

Query: 185 -----SNTHHVTCNNGICHLFSGNHFDVHMVCASADLSSQYIFHYVDTGTTPTHDQRFSP 244
                +   +VTC  GI  ++         +  + D S      ++ T T        S 
Sbjct: 184 HVMLIATVAYVTCIVGIIMMY---------IWYTPDPSCLLNIFFI-TWTLVLLQLMTSV 243

Query: 245 S---KSECWHLNSGSDGAVHSIYLLVCHSEAFKNFGNAANEPGGGKCVRNAETSTKTDWL 304
           S   K     L  G  G ++ +++  C   +         EP G  C R AE S +TDWL
Sbjct: 244 SLHPKVNAGFLTPGLMG-LYVVFICWCAIRS---------EPVGENCNRKAEASNRTDWL 303

Query: 305 TIISFIVAVLAMVIATFSTGIDSKCFQVRSYALSKSFIFIIIIPTKKEQRKREKFRKDDK 364
           TIISFIVA+LAMVIATFSTGIDSKCFQ+R                           KDD 
Sbjct: 304 TIISFIVALLAMVIATFSTGIDSKCFQLR---------------------------KDDS 363

Query: 365 QDEEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTNHPIRKWTIDVGWTSTWVRIVNEWLA 424
              EDDVPYGYGFFHLVFATGAMYFAMLLIGWNT+H ++KWTIDVGWTSTWVRIVNEWLA
Sbjct: 364 P-AEDDVPYGYGFFHLVFATGAMYFAMLLIGWNTHHAMKKWTIDVGWTSTWVRIVNEWLA 391

Query: 425 VCVYLWMLVAPVIWKNR 427
           VCVY+WMLVAPVI K+R
Sbjct: 424 VCVYIWMLVAPVILKHR 391

The following BLAST results are available for this feature:

BLAST of Lsi11G002720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SERIC_DICDI	1.3e-09	26.74	Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1	[more]
SERC1_BOVIN	2.2e-09	36.84	Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1	[more]
SERC1_HUMAN	2.2e-09	36.84	Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1	[more]
SERC1_PONAB	2.2e-09	36.84	Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1	[more]
SERC1_RAT	2.2e-09	36.84	Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1	[more]

BLAST of Lsi11G002720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF26_CUCSA	4.7e-168	70.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G005270 PE=4 SV=1	[more]
M1TDA1_9ROSI	5.8e-126	57.67	Maternal effect embryo arrest 55-1 OS=Dimocarpus longan PE=2 SV=1	[more]
D7TBR4_VITVI	2.2e-125	56.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04200 PE=4 SV=...	[more]
K7KRM5_SOYBN	5.4e-124	54.24	Uncharacterized protein OS=Glycine max GN=GLYMA_05G232100 PE=4 SV=1	[more]
K7L4U1_SOYBN	2.7e-123	54.12	Uncharacterized protein OS=Glycine max GN=GLYMA_08G039500 PE=4 SV=1	[more]

BLAST of Lsi11G002720 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24460.1	7.5e-117	51.39	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT2G33205.1	2.9e-68	39.42	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT4G13345.1	7.6e-61	60.56	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT1G16180.1	4.5e-29	25.35	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]
AT3G06170.1	3.1e-14	45.12	Serinc-domain containing serine and sphingolipid biosynthesis protei...	[more]

BLAST of Lsi11G002720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071120\|ref\|XP_008458214.1\|	2.1e-169	71.65	PREDICTED: probable serine incorporator isoform X1 [Cucumis melo]	[more]
gi\|659071122\|ref\|XP_008458224.1\|	1.0e-168	71.43	PREDICTED: probable serine incorporator isoform X2 [Cucumis melo]	[more]
gi\|449443319\|ref\|XP_004139427.1\|	6.7e-168	70.99	PREDICTED: probable serine incorporator isoform X1 [Cucumis sativus]	[more]
gi\|1009160439\|ref\|XP_015898350.1\|	1.5e-127	57.63	PREDICTED: probable serine incorporator [Ziziphus jujuba]	[more]
gi\|452916776\|gb\|AGG19193.1\|	8.3e-126	57.67	maternal effect embryo arrest 55-1, partial [Dimocarpus longan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005016	TDE1/TMS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G002720.1	Lsi11G002720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005016	Serine incorporator/TMS membrane protein	PANTHER	PTHR10383	SERINE INCORPORATOR	coord: 34..430 score: 8.4E
IPR005016	Serine incorporator/TMS membrane protein	PFAM	PF03348	Serinc	coord: 268..427 score: 1.7E-26coord: 24..168 score: 4.1
None	No IPR available	PANTHER	PTHR10383:SF23	SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN	coord: 34..430 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi11G002720	Csa2G005270	Cucumber (Chinese Long) v2	culsiB098
Lsi11G002720	CSPI02G01270	Wild cucumber (PI 183967)	cpilsiB096
Lsi11G002720	Cucsa.116280	Cucumber (Gy14) v1	cgylsiB163
Lsi11G002720	CmaCh12G012390	Cucurbita maxima (Rimu)	cmalsiB159
Lsi11G002720	CmaCh05G013310	Cucurbita maxima (Rimu)	cmalsiB715
Lsi11G002720	CmoCh05G013410	Cucurbita moschata (Rifu)	cmolsiB706
Lsi11G002720	CmoCh12G012680	Cucurbita moschata (Rifu)	cmolsiB148
Lsi11G002720	Cla016754	Watermelon (97103) v1	lsiwmB116
Lsi11G002720	MELO3C004548	Melon (DHL92) v3.5.1	lsimeB116
Lsi11G002720	ClCG11G002580	Watermelon (Charleston Gray)	lsiwcgB078
Lsi11G002720	MELO3C004548.2	Melon (DHL92) v3.6.1	lsimedB124
Lsi11G002720	Cla97C11G209030	Watermelon (97103) v2	lsiwmbB074
Lsi11G002720	Bhi06G001736	Wax gourd	lsiwgoB103
Lsi11G002720	Cp4.1LG07g10000	Cucurbita pepo (Zucchini)	cpelsiB660
Lsi11G002720	Cp4.1LG11g10990	Cucurbita pepo (Zucchini)	cpelsiB074
Lsi11G002720	CsGy2G001300	Cucumber (Gy14) v2	cgyblsiB089
Lsi11G002720	Carg25997	Silver-seed gourd	carlsiB250
Lsi11G002720	Carg10870	Silver-seed gourd	carlsiB514
Lsi11G002720	CsaV3_2G002380	Cucumber (Chinese Long) v3	cuclsiB108

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi11G002720	Bottle gourd (USVL1VR-Ls)	lsilsiB057
Lsi11G002720	Cucurbita maxima (Rimu)	cmalsiB049
Lsi11G002720	Cucurbita maxima (Rimu)	cmalsiB102
Lsi11G002720	Cucurbita moschata (Rifu)	cmolsiB035
Lsi11G002720	Cucurbita moschata (Rifu)	cmolsiB088
Lsi11G002720	Cucurbita pepo (Zucchini)	cpelsiB282
Lsi11G002720	Cucurbita pepo (Zucchini)	cpelsiB527
Lsi11G002720	Wild cucumber (PI 183967)	cpilsiB012
Lsi11G002720	Cucumber (Chinese Long) v2	culsiB010
Lsi11G002720	Melon (DHL92) v3.5.1	lsimeB102
Lsi11G002720	Watermelon (Charleston Gray)	lsiwcgB107
Lsi11G002720	Watermelon (97103) v1	lsiwmB120
Lsi11G002720	Melon (DHL92) v3.6.1	lsimedB111
Lsi11G002720	Silver-seed gourd	carlsiB033
Lsi11G002720	Silver-seed gourd	carlsiB111
Lsi11G002720	Cucumber (Chinese Long) v3	cuclsiB010
Lsi11G002720	Watermelon (97103) v2	lsiwmbB094
Lsi11G002720	Wax gourd	lsiwgoB143