Lsi10G014040 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G014040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	RAN GTPase 3
Location	chr10 : 18135437 .. 18140123 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATCGATCATATAGGTATGAGTTGTAGTTTGAAGAAAAGAAGAGGAGTTAGCGAGAGGATCAACCATCGAGGATCGATTGCGAATGGCCTATGTTTAGAGGAAAGAAGCGGAGCGAGAGCGAGAAAAAATCGAGAAAATCACGCGTGTTGTGCTTCTTTAGTTGTTTTGGTAAATCACCCAATACTGACATAAGCAAAAGGCCAACAAATTTAGGTTTTCAAAAGTTTGGTTAAAACTCGTTTGCACCCTTCCCATCAGTACAAACTCCCCTTTTCATTTTCCACGTGTTTTACTTAATTTTTTTTTTGTTTTGACTAAAATTTGAATTGCTATAATGTCGAGGCTCAAGTTTATTTGAGATTCTAAAGAATTTATACTCTAATCAGAGTAATTTTGCAAGGTTGGAAAGAATAAAGGTATTTTTGAAACAAAGAAATTTTTTTAGGGGTGTTTCATATAATTTTATATTATTTTAGTACGATAAATGTGGGATTTGAAGATTTAAACTTCTAACCCTACACGAAATAAGTATGATTGAGCTGTGCAAGTGTTAGTGCCTTAAATAGGTTGTTAATTAAATGTAGAAATTTACCATAGATTCATAAAATTGGAGTATTGTGTCTAATTTAATGAAACAATTTATAAAATGTCTCAAGTTTATTCTTACAGTTTTCACCATTTTTAGTGAGATATTTGAATTTTTAGACAAATGCTGAAAATAAGATAGAAACATGAATATGTTTCTAAAATTTATTAAAAAATTGACTAAAAGAGATTGATATTTTAAAAAATTAACTTCATTTTTTTTTATAATATGTAAGAAGGGAAAATTAGAACATTGATCTCGAGATCGATAGTACAAATTGTATGTTAGTTAAGTTATGCTTATGTTGACAATTTTTTATAGGATTGAAAGTAAAACTACATTTATACATTTAAAAGCATAAAAATGATCCAAATTCCATTTTAACCAATATTATGTAATAAATTCATAAAATTTAAATCTTGGTTTTTTTTTTTTAGTACATAGTCCCATGATTTTTTTAATTATTATTATTATTATTATTATTTCTTTTACAATAATTGAGGTAAAAATCAAACATCTAACTTCAAAAAATACAGTACAAGCTTTATGTACGTTGAATTATATTTATATTGGGTAATCTCCTAACTTTACTTAGCTATGCTTAAATGGGCTTTGTATATATTTAAACTTAAAAAATTTAGGGCAAATATCAATTCATATCCCTAAATTTTGTAAGTTGTATCAATTAAAATTCTAAACCACTAATTGTATCAATTTGAACCCTGAACTTTCATAAGTATATCAATTTATATCATTATCCAACTTATTCGACCAACATCATGTGACACTTGTAATTTAAGTCAATTAAACTCTTAAATTTTCATAAGCCAATCAATTTATATCATTCATTACGATTGCCTTTGAAAATCATCTATGCAATAATTATAATGTGTGTAGACTTCTTTAAATGTCAGTTTTTATAAAATGAATAATTAGAGTAAATGCACGGACGATTTTCAAATAAAATTTTGTATAAAGGTTTAAATCGATTCATTTATGAAATACTAGAGGTTAAATTGATACAATTATAAGTTTTATACGAGCCTTTTCCAAACGGAACATAATAAAAGGTATAAATTGATACAATTGTTAGTCTATAGTTTAAATTGATACACCTGGGTATAAAATGACATTTTTCCAAAAATTTATTAAAACATCATTTAAAAAGCAAAAAATTATTTTAAATGATAAAATGCTGAAAATATTTATAAATATAATAAATTTTTACTGTCTATCTGTATCGCGATAGACTACATATAGATACAAATAGTAGTCTATCACGATCAGTCGTAGATAGACAGTGAAATTTTGCTATATTTGTAAATATTTTAGTTTATTTTTTATATTTGAAAACGGACGTTTAAAAAGCTTCTTAAACAAAAAACGTAAGGGTTAACCTGTAATTTCACAAAAATAAAAAGAATCTCCGTATTTATTAAAATTTCAATTTTTTTTTTGTTCACCACCTTTTTCGCTTGCACTTTCCATTCAGCCGTGTAAACAAGCAACGTCAAACTCGCCTCAGACGACAACTCCATCAATCTTCTCTCTGTTCTGTCTGTAACTTCCCTCATTAATTCTCTCTGCTTAATTCATTCCTCTTTCTTCCTTCGATTCTTCCGCCGCCGCCGCCGCCGTCGCTGTAGTCAACCTTCTTTCCCACCAATCCACTCTCAAACTCATCCTCCATTTCTTCGCCAACAGGTCTCAATTCTTCCTTCCCATTTTTCATTTTGGGGCTTCTCTTGCTCCTTCAAGTTTTTCGTTTCAGCTACTGTAGATGATTCCGATTTTTTCAATTTTAGTTTGTGAATTGCTGAATTTGGTGTTTTTGGATCAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCCATGGCTCATAAAGTGGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTCGGAAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGTCTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTTCAGGTACAAGCTTAATCGTTTCAACTCTCCGCGATTAAATTAGCATTTTTCAATTTATTGATTGATCGTGTGAGTTGTCGTCTGTTATTGAAGAACTTCATAATCTACGTTCCGATGATTTCGAAATTGTGGCTTGCGCCTTAGTTTCTACTTTCGATCGTTAAAGTACAGTGGATTTATTGCATGTAGGGTTTGAGTGCTTTGAAGTAGTTGCTTTGTTGCTTGAGGCTACAAACGTTTAGGATTGAATGAATAGGTGTAGGATTTATGAAATATAAATAATTTGTTGCTGATCTAGCAAGCAAACGATCTGGATTTTTTAGCCATGTCTAACGGAAGACATGTGTGGTCAATTATTCTAAAATATGGTTGTGAGTAGTTAAAGCAGTAGGAAATTGGCAGAGTCCTTTTCCCATATTTCTAGATTACACTTATTTCTTACCAAATTATAAAGCACCCTTGTAAATTTGTAGTATTCCTCTAATTTTGCAAGTCAAATTTTGAGTGTTTTCACTTATGAAAAGTATTATAAACGATTGTTCTCTTTTAACTGATTTAAACGTAGTTAAAAGTTAAAACCAAAAGTTTCTTATGAAAAGTTAAAGGTATGCCACCCACCAACGTGAGAGCTCAATCTTAATCGACTTATGCTCTTTCCTTTGAAGTCGGATGTTCAAATCCATGTACCCCACATTTATTGTACGGAAAAGAAAAAAGAAGAAAAGTTAGGGTATGCCAATCCTATTATGGCTAAACCAATAGATATTACCTGAGGGATGGCTAATTCATGTGAAAAGCTATTAGTCAATGGAGCATAGATTCTGAAATTTTTGAAGGAGCTGGAGAAGAGAGATAGGGGTCTATAACTAAAATTATCCGATATTCCCACGTGTGGAATCATATACATTCTGAATCCATTCCCCACTGTTTCTTGTTTGTCACGAACCCAAAATTTTGTTATAAGAGATTATACATTGAAGGCCAACGAGATGGAGGGTTGCCCTGATTGACGATATCACTGAATTGGGCAATATTATTCAGTCTGTAATCATTTTCCATTCCGGAGTTCTTTACTCTTAGTAGTTGAAGTGTTAGCCATCTCATTTTAGTCAATATTATTGACAGGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGAGGAGCTGTTGGTGCTCTCCTCGTCTATGATCTGACAAAGAGACAGACTTTCGAGAATGTTCAAAGGTGGCTTCGGGAGCTGAGAGATCATGCAGACTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTGAGATCTGTCTCAGAGGATGACGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTCATCGAGACCTCGGCCTTGGATGCTACCAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCTAGTGTGGTCCATCCCGGTCAAGGAACGACCATCAACGTTTCGGATACTTCTGGGGACTCAAACAGGAGGGGTTGCTGTTCTTCTTGAGCAAATACAGAAAGATAGAACCGATAGTTCACATCAAAGGTTTCTCTTGTGTCTCTCTTTCCTTTTTATTCATAATTGATCTGTTGTTGTTGATCTTCTGGATTTGGAGAAACTAGGAAAATGTAGCGTATTCATAGCGGGCATGTAGAATGATTATCTTACTCGACCCCTCTCCATCCCCTGGTTTATCTCATTAGCAAGTGTTAGTTATTTTCAGCAATTTCCAAATTTCTTCCTTAATTCCTTTACTTACCCATTCATATAACAACGATTACTTGAGGAATTTGATTTGTATTTGTTCTCCATTTGCAACTCTTATTCATAAATTCTTACATTTTTCAGCTAGCAATTAAACAGATATGATACAGTTGGAATTGCTAGTTGTGTGTGGGTGTGTTTGTCACTGACTGGCTTATTTTGTAGTAAATAAAATTGAATTCTGCTCTC

mRNA sequence

ATGGAGATCGATCATATAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCCATGGCTCATAAAGTGGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTCGGAAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGTCTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTTCAGGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGAGGAGCTGTTGGTGCTCTCCTCGTCTATGATCTGACAAAGAGACAGACTTTCGAGAATGTTCAAAGGTGGCTTCGGGAGCTGAGAGATCATGCAGACTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTGAGATCTGTCTCAGAGGATGACGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTCATCGAGACCTCGGCCTTGGATGCTACCAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCTAGTGTGGTCCATCCCGGTCAAGGAACGACCATCAACGTTTCGGATACTTCTGGGGACTCAAACAGGAGGGGTTGCTGTTCTTCTTGAGCAAATACAGAAAGATAGAACCGATAGTTCACATCAAAGGTTTCTCTTGTGTCTCTCTTTCCTTTTTATTCATAATTGATCTGTTGTTGTTGATCTTCTGGATTTGGAGAAACTAGGAAAATGTAGCGTATTCATAGCGGGCATGTAGAATGATTATCTTACTCGACCCCTCTCCATCCCCTGGTTTATCTCATTAGCAAGTGTTAGTTATTTTCAGCAATTTCCAAATTTCTTCCTTAATTCCTTTACTTACCCATTCATATAACAACGATTACTTGAGGAATTTGATTTGTATTTGTTCTCCATTTGCAACTCTTATTCATAAATTCTTACATTTTTCAGCTAGCAATTAAACAGATATGATACAGTTGGAATTGCTAGTTGTGTGTGGGTGTGTTTGTCACTGACTGGCTTATTTTGTAGTAAATAAAATTGAATTCTGCTCTC

Coding sequence (CDS)

ATGGAGATCGATCATATAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCCATGGCTCATAAAGTGGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTCGGAAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGTCTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTTCAGGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGAGGAGCTGTTGGTGCTCTCCTCGTCTATGATCTGACAAAGAGACAGACTTTCGAGAATGTTCAAAGGTGGCTTCGGGAGCTGAGAGATCATGCAGACTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTGAGATCTGTCTCAGAGGATGACGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTCATCGAGACCTCGGCCTTGGATGCTACCAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCCAGGAAGCAGCTGCTAGTGTGGTCCATCCCGGTCAAGGAACGACCATCAACGTTTCGGATACTTCTGGGGACTCAAACAGGAGGGGTTGCTGTTCTTCTTGA

Protein sequence

MEIDHIGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS

Homology

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BLAST of Lsi10G014040 vs. Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.3e-104
Identity = 189/217 (87.10%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLR+VSEDDG  ++EKEGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEA A    PGQGTTINV+DTSG++ ++GCCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNT-KKGCCST 216

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BLAST of Lsi10G014040 vs. Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.5e-101
Identity = 187/217 (86.18%), Postives = 206/217 (94.93%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL HLR+VSE+DGQ +AEKEGLSF+ETSAL+A NI+KAFQTILTEIYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEA++++  PGQGTTINV+D S  + RR CCS+
Sbjct: 181 ALAAQEASSNL--PGQGTTINVADASA-NQRRSCCST 214

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BLAST of Lsi10G014040 vs. Swiss-Prot
Match: RAA2B_ARATH (Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 8.5e-101
Identity = 185/217 (85.25%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFENV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA ++  PGQGT IN+SD+S  +NR+GCCS+
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

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BLAST of Lsi10G014040 vs. Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4)

HSP 1 Score: 364.8 bits (935), Expect = 7.2e-100
Identity = 186/218 (85.32%), Postives = 204/218 (93.58%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 198 ALAAQE-AAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQE AAA+   PGQGTTINV DTSG + +R CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217

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BLAST of Lsi10G014040 vs. Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 9.4e-100
Identity = 183/217 (84.33%), Postives = 201/217 (92.63%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA++VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+TKRQTF+NVQRWLRELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           ++ GNKSDL HLR+VSE D Q + +KEGLSF+ETSAL+A N+DKAFQTILT+IYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAAAS   PGQGTTINVSD S +  +RGCCS+
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANV-KRGCCST 216

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BLAST of Lsi10G014040 vs. TrEMBL
Match: A0A0A0KE61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G188120 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 7.2e-115
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAAAS+ HPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

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BLAST of Lsi10G014040 vs. TrEMBL
Match: I1LQK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G058900 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.8e-103
Identity = 191/217 (88.02%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDLSHLR+VSEDDGQ +AE+EGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA   + PGQGTTINV D SG++ +RGCCS+
Sbjct: 181 ALAAQEAAVGTILPGQGTTINVGDASGNT-KRGCCSA 216

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BLAST of Lsi10G014040 vs. TrEMBL
Match: A0A0B2R005_GLYSO (Ras-related protein Rab11C OS=Glycine soja GN=glysoja_010149 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.8e-103
Identity = 191/217 (88.02%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDLSHLR+VSEDDGQ +AE+EGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA   + PGQGTTINV D SG++ +RGCCS+
Sbjct: 181 ALAAQEAAVGTILPGQGTTINVGDASGNT-KRGCCST 216

[Close]

BLAST of Lsi10G014040 vs. TrEMBL
Match: M5WCS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011297mg PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.8e-103
Identity = 191/217 (88.02%), Postives = 210/217 (96.77%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRPTFENVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSVSEDDGQT+AE+EGLSF+ETSAL+ATN++KAFQTILTEIYHI+SKK
Sbjct: 121 MMTGNKSDLNHLRSVSEDDGQTLAEREGLSFLETSALEATNVEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEA ++ + PGQGTTINVSD SG++N+RGCCS+
Sbjct: 181 ALAAQEAVSTTL-PGQGTTINVSDASGNNNKRGCCST 216

[Close]

BLAST of Lsi10G014040 vs. TrEMBL
Match: A0A0D2TGK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G095700 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 6.3e-103
Identity = 190/217 (87.56%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALMVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLR+V+E+DGQ +AE+EGLSF+ETSAL+ATNI+KAFQTILTEIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVTEEDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAAAS   PGQGTTINV+DTSG++ +RGCCS+
Sbjct: 181 ALAAQEAAASTAIPGQGTTINVTDTSGNT-KRGCCST 216

[Close]

BLAST of Lsi10G014040 vs. TAIR10
Match: AT1G07410.1 (AT1G07410.1 RAB GTPase homolog A2B)

HSP 1 Score: 367.9 bits (943), Expect = 4.8e-102
Identity = 185/217 (85.25%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTFENV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA ++  PGQGT IN+SD+S  +NR+GCCS+
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of Lsi10G014040 vs. TAIR10
Match: AT3G46830.1 (AT3G46830.1 RAB GTPase homolog A2C)

HSP 1 Score: 364.8 bits (935), Expect = 4.1e-101
Identity = 186/218 (85.32%), Postives = 204/218 (93.58%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 198 ALAAQE-AAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQE AAA+   PGQGTTINV DTSG + +R CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217

[Close]

BLAST of Lsi10G014040 vs. TAIR10
Match: AT5G59150.1 (AT5G59150.1 RAB GTPase homolog A2D)

HSP 1 Score: 364.4 bits (934), Expect = 5.3e-101
Identity = 184/218 (84.40%), Postives = 206/218 (94.50%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNK+DL+HLRSV+E+DGQT+AE EGLSF+ETSAL+ATN++KAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 198 ALAAQE-AAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQE AAA+   PGQGTTINV DTSG + +RGCCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of Lsi10G014040 vs. TAIR10
Match: AT1G09630.1 (AT1G09630.1 RAB GTPase 11C)

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-87
Identity = 159/217 (73.27%), Postives = 192/217 (88.48%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+TRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFENV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           ++IGNK+DL HLR+V+ +D Q+ AEKEGLSFIETSAL+A N++KAFQTIL+E+Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ++++ +  A+  +  +G TI+V+ TS  + ++ CCSS
Sbjct: 181 SISSDQTTAN-ANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of Lsi10G014040 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D)

HSP 1 Score: 284.6 bits (727), Expect = 5.3e-77
Identity = 138/215 (64.19%), Postives = 174/215 (80.93%), Query Frame = 1


Query: 20  HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKTVK 79
           ++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+TR+L V  K +K
Sbjct: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIK 63

Query: 80  AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVM 139
           AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TFENV+RWLRELRDH D NIV+++
Sbjct: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123

Query: 140 IGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKAL 199
           +GNKSDL HL +V  +D ++ AE E L F+ETSAL++TN++ AF  +LT+IYH++SKKA+
Sbjct: 124 VGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAM 183

Query: 200 AAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
            A E + +V   G+   ++VS       + GCCS+
Sbjct: 184 EAGEDSGNVPSKGEKIDVDVSAV----KKTGCCSN 214

[Close]

BLAST of Lsi10G014040 vs. NCBI nr
Match: gi|449450768|ref|XP_004143134.1| (PREDICTED: ras-related protein Rab11C [Cucumis sativus])

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAAAS+ HPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Lsi10G014040 vs. NCBI nr
Match: gi|734387469|gb|KHN25232.1| (Ras-related protein Rab11C [Glycine soja])

HSP 1 Score: 382.9 bits (982), Expect = 4.1e-103
Identity = 191/217 (88.02%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDLSHLR+VSEDDGQ +AE+EGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA   + PGQGTTINV D SG++ +RGCCS+
Sbjct: 181 ALAAQEAAVGTILPGQGTTINVGDASGNT-KRGCCST 216

[Close]

BLAST of Lsi10G014040 vs. NCBI nr
Match: gi|356542139|ref|XP_003539528.1| (PREDICTED: ras-related protein Rab11C-like [Glycine max])

HSP 1 Score: 382.9 bits (982), Expect = 4.1e-103
Identity = 191/217 (88.02%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDLSHLR+VSEDDGQ +AE+EGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA   + PGQGTTINV D SG++ +RGCCS+
Sbjct: 181 ALAAQEAAVGTILPGQGTTINVGDASGNT-KRGCCSA 216

[Close]

BLAST of Lsi10G014040 vs. NCBI nr
Match: gi|595829487|ref|XP_007205884.1| (hypothetical protein PRUPE_ppa011297mg [Prunus persica])

HSP 1 Score: 382.9 bits (982), Expect = 4.1e-103
Identity = 191/217 (88.02%), Postives = 210/217 (96.77%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRPTFENVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDL+HLRSVSEDDGQT+AE+EGLSF+ETSAL+ATN++KAFQTILTEIYHI+SKK
Sbjct: 121 MMTGNKSDLNHLRSVSEDDGQTLAEREGLSFLETSALEATNVEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEA ++ + PGQGTTINVSD SG++N+RGCCS+
Sbjct: 181 ALAAQEAVSTTL-PGQGTTINVSDASGNNNKRGCCST 216

[Close]

BLAST of Lsi10G014040 vs. NCBI nr
Match: gi|1009114793|ref|XP_015873880.1| (PREDICTED: ras-related protein Rab2BV [Ziziphus jujuba])

HSP 1 Score: 382.1 bits (980), Expect = 7.0e-103
Identity = 192/217 (88.48%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 18  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 77
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 78  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 137
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 138 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 197
           +M GNKSDLSHLR+VSEDDGQ +AE+EGLSF+ETSAL+A NI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEAINIEKAFQTILTEIYHIVSKK 180

Query: 198 ALAAQEAAASVVHPGQGTTINVSDTSGDSNRRGCCSS 235
           ALAAQEAA +   PGQGTTINV++TSG++ RRGCCS+
Sbjct: 181 ALAAQEAATNSTLPGQGTTINVNETSGNA-RRGCCST 216

The following BLAST results are available for this feature:

BLAST of Lsi10G014040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RB11C_LOTJA	6.3e-104	87.10	Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1	[more]
RB2BV_BETVU	8.5e-101	86.18	Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1	[more]
RAA2B_ARATH	8.5e-101	85.25	Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2 SV=2	[more]
RAA2C_ARATH	7.2e-100	85.32	Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4	[more]
RB11A_TOBAC	9.4e-100	84.33	Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1	[more]

BLAST of Lsi10G014040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE61_CUCSA	7.2e-115	98.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G188120 PE=4 SV=1	[more]
I1LQK7_SOYBN	2.8e-103	88.02	Uncharacterized protein OS=Glycine max GN=GLYMA_12G058900 PE=4 SV=1	[more]
A0A0B2R005_GLYSO	2.8e-103	88.02	Ras-related protein Rab11C OS=Glycine soja GN=glysoja_010149 PE=4 SV=1	[more]
M5WCS1_PRUPE	2.8e-103	88.02	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011297mg PE=4 SV=1	[more]
A0A0D2TGK7_GOSRA	6.3e-103	87.56	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G095700 PE=4 SV=1	[more]

BLAST of Lsi10G014040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07410.1	4.8e-102	85.25	RAB GTPase homolog A2B	[more]
AT3G46830.1	4.1e-101	85.32	RAB GTPase homolog A2C	[more]
AT5G59150.1	5.3e-101	84.40	RAB GTPase homolog A2D	[more]
AT1G09630.1	2.0e-87	73.27	RAB GTPase 11C	[more]
AT4G18800.1	5.3e-77	64.19	RAB GTPase homolog A1D	[more]

BLAST of Lsi10G014040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450768\|ref\|XP_004143134.1\|	1.0e-114	98.62	PREDICTED: ras-related protein Rab11C [Cucumis sativus]	[more]
gi\|734387469\|gb\|KHN25232.1\|	4.1e-103	88.02	Ras-related protein Rab11C [Glycine soja]	[more]
gi\|356542139\|ref\|XP_003539528.1\|	4.1e-103	88.02	PREDICTED: ras-related protein Rab11C-like [Glycine max]	[more]
gi\|595829487\|ref\|XP_007205884.1\|	4.1e-103	88.02	hypothetical protein PRUPE_ppa011297mg [Prunus persica]	[more]
gi\|1009114793\|ref\|XP_015873880.1\|	7.0e-103	88.48	PREDICTED: ras-related protein Rab2BV [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G014040.1	Lsi10G014040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 31..191 score: 2.7
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 28..187 score: 9.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 23..232 score: 4.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 25..196 score: 2.93
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 71..93 score: 9.0E-42coord: 30..51 score: 9.0E-42coord: 168..190 score: 9.0E-42coord: 133..146 score: 9.0E-42coord: 53..69 score: 9.0
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 18..234 score: 1.5E
None	No IPR available	PANTHER	PTHR24073:SF495	SUBFAMILY NOT NAMED	coord: 18..234 score: 1.5E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 27..193 score: 4.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 32..189 score: 1.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 30..193 score: 2.4E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 35..227 score: 1.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 18..195 score: 0.
None	No IPR available	PROFILE	PS51419	RAB	coord: 25..232 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G014040	Csa6G188120	Cucumber (Chinese Long) v2	culsiB413
Lsi10G014040	CSPI06G14170	Wild cucumber (PI 183967)	cpilsiB416
Lsi10G014040	Cucsa.138960	Cucumber (Gy14) v1	cgylsiB222
Lsi10G014040	CmaCh20G003770	Cucurbita maxima (Rimu)	cmalsiB506
Lsi10G014040	CmaCh02G007740	Cucurbita maxima (Rimu)	cmalsiB547
Lsi10G014040	CmoCh20G004090	Cucurbita moschata (Rifu)	cmolsiB490
Lsi10G014040	CmoCh02G007760	Cucurbita moschata (Rifu)	cmolsiB532
Lsi10G014040	Cla013332	Watermelon (97103) v1	lsiwmB078
Lsi10G014040	MELO3C025885	Melon (DHL92) v3.5.1	lsimeB044
Lsi10G014040	ClCG02G019840	Watermelon (Charleston Gray)	lsiwcgB054
Lsi10G014040	MELO3C025885.2	Melon (DHL92) v3.6.1	lsimedB046
Lsi10G014040	Cla97C02G045860	Watermelon (97103) v2	lsiwmbB052
Lsi10G014040	Cp4.1LG05g09330	Cucurbita pepo (Zucchini)	cpelsiB588
Lsi10G014040	Cp4.1LG16g06250	Cucurbita pepo (Zucchini)	cpelsiB219
Lsi10G014040	CsGy6G014030	Cucumber (Gy14) v2	cgyblsiB378
Lsi10G014040	Carg26591	Silver-seed gourd	carlsiB832
Lsi10G014040	Carg03339	Silver-seed gourd	carlsiB303
Lsi10G014040	CsaV3_7G010050	Cucumber (Chinese Long) v3	cuclsiB525
Lsi10G014040	CsaV3_6G016560	Cucumber (Chinese Long) v3	cuclsiB438

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G014040	Cucurbita maxima (Rimu)	cmalsiB196
Lsi10G014040	Cucurbita maxima (Rimu)	cmalsiB745
Lsi10G014040	Cucurbita moschata (Rifu)	cmolsiB186
Lsi10G014040	Cucurbita moschata (Rifu)	cmolsiB738
Lsi10G014040	Cucurbita moschata (Rifu)	cmolsiB771
Lsi10G014040	Cucurbita pepo (Zucchini)	cpelsiB318
Lsi10G014040	Cucurbita pepo (Zucchini)	cpelsiB412
Lsi10G014040	Cucurbita pepo (Zucchini)	cpelsiB487
Lsi10G014040	Cucurbita pepo (Zucchini)	cpelsiB700
Lsi10G014040	Watermelon (97103) v1	lsiwmB063
Lsi10G014040	Cucumber (Gy14) v2	cgyblsiB002
Lsi10G014040	Silver-seed gourd	carlsiB137
Lsi10G014040	Silver-seed gourd	carlsiB348
Lsi10G014040	Silver-seed gourd	carlsiB910
Lsi10G014040	Wax gourd	lsiwgoB068