Lsi10G012530 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGTAAGCCTTACATTTGGAATTGATATTAGGACCACATCTCCTAAAAATACATTTCAAAAAAAATTTGAATACTATGTTCTTCATGATTTAGTTCTATTAGATAAACATGCATATCGATCCTTAAAATTATATCTCTTTAGGTTCACCATTTTTTGATCGATTTTTTTTTTTTGTGTGTAGAATATCTATTTGAATTTCATGGACTCCGATATCTTATTAGAGAAACATAAAATTGTTGGACCGGTATGGCAACCCTAGAGGGGGGTGAATAGGGTTTTATTGAGCTAATTAAAACTTTTTACTAATGTGGGCCCAATTAAACAAATTAATACACTTTATACTAACAAGTAATTTGAACAATAATTTCATGCAAATAAATTCAATCCAAAATTAACCAAGAAAATAAAACTAATACTTTTAAGCACCCTATTTAATTCTAATAATAAGATTGGTAAATGATATGCAAATTTAAGGACTACCAATCAAAGTAAACAAATATGACCAATTAATTTCAATGAATAAATATTGCAATTAATTTCATACAATAAAATATAATAACAAAATAATTGCAAAAATAAATAGGAGATGGATAGAGAAATTAACACCGAGAATTTTTATAGTGGTTCGGTCAAACTCGACCTACATCCACTTTCCCAAACACCTCTTGGGATTTTGAATAAGGATCTACCGACTCTTTCCACGGATTAGAGCCCAACCGCTACACTGCTCTTTTTGCGAGATCAAGAGCAAACTCAATCCTTTCCACGGATTAGAATCAAACCGTTACAACCACTCTTTTTCCGGGATCAAGAGCAACCGTTACAAAAGTTTGGAAAAAATTAAAGAACACACTTGAGCAACTAAATAGAGTGTATTTACAAATTTTGAGCTCACAACAAATCAATCCTCACCATACATAAATTTCTCTCAAGAATAAGATGAAAAGAATAAAATTGAAGCTTGGAGAGAGAGCAACAATGGAAGCTTAATGAATTATGGAGGATTGTAAAAAGATGTGAAATTGTTGTTTTTTTATTTTGGAGAATATGAAGTGTTTAAAAAGAGAGAAAAGATGTTGGAAACTACATTAAATTTGGACCATTAGATGTTGGTAAAAGAAAATTGAATGGTTGAGATTTAAACTCAACTAGCCGTTAGACACACACATAAAATAATATAAAATTCATTTTCTTTTAAAGACAACTAGCCGTTAGACACAAACATATAATAATATTAAATTCATTTTCTTTTTAAAACCATTCTTTTTAAAACCAACAAAAATCAAAATCTCCATGTGTCACTTATCTATTTCTCCACTTGTCATCCTCTAGTAGGTCCACTTTGATGATTTGGCCGCCACGTCATCGACATCGGGTATTTTTTCGTTAAGCTTGTTCCAGCCATATTTTCTTCGTTTGAACTCCGATTTGAGTGATTCAAATTGTGTTGGAACCGTTGTTCCAAGCTCTACACAATGGACACTTCAAAACACTCAAATTGTTAATAAATAAAAGCAGGTTTGTTATCATCAAAATATTAATTAATTAATTAATTTGATAATAAGGGCCAAAAAGCCAACAAAAATTTCATCTCATAACTAATTGACAATAAAAAGAATAGTTGGTGTATCTTTTAAAGATTGTGAAGACTTTCTATACTACTAATCTGGAATTCTCAATACAAGTTCCCCCACTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAGAGAAAAAATCGACCATCTTGTCGAGTTGGGATTCATTTTTAGATTCCCAGAAGAAAAAGAGAATCCAACACTATAAATCTTTCCAAGTTCCATTAAAGAAATGAAAGTTAAGACAAACAAAACACCAAATCATTGATGAGTATTGCCCTGCATGATGTGTAATACCCACTTCTTAATTGACGTGATTATTCGTCAATCAGTATATTCCACGACCAATCGGCATGTTCACACTATGATATTAAATTTTCATCAATATCTCAATGTTTCTACCAATATTTTCATATATATATTTCTATCGAATTCGATATTAACCTAAAGAGTAAATCGACATTTCTATTATATCATAAAAAAAATCCATAAAATATATATAAAAAAAAGTAAAGCGATAAAATGTACACACAGTTGTTTAATTCACATATACATAATCATACAGAATGACAAATCAACACTATTGGCACCATATAGAATTAAAAAGAATCCATAAGCGGCTGAATTTTGGGTTCTTATATATATAAAGGCAAACAATGGGTCACTTTGATTCAAATCACTTGAAAAGAATCAAGTCTCTTCTTCTTCATTATGGCAAATTTGGGATTGCAGCTGTTTTTTGTTATTCTATCCGCTACTTCTTTTTTTCACCTTTGTAGAGCAATCTCTTCTTGTAACGGGCCATGTCACACCCTAAATGATTGTCAAGGCCAATTAATTTGCATAAACGGAATATGCCAAGATGATCCTAACCTTGGCACACACCTATGTTCCGGTGGAGGAGGATCGGGCCCGCCATCTTCTGGCAATAATGGTTGTCATTCAATTGGAAACTTGAATTGTAAGGGAAAATCATTTCCCCAATTCAAGTGCTCGCCTCCAGTGACTTCCTCTACTCGAGCCGTGCTTACAAATAATGACTTCACCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGTGATGGGCAGTTCCATCATAACTCTGACCCAATAGTGGCGTTGTCCACAGGTTGGTACAATGGAGGATCGAGATGTGGAAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTGTTGGCTAAAGTGGTGGATGAGTGTGATTCTGTGAACGGATGTGACAAGGAGCATGCTCATTTGCCTCCATGTCACAACAATATTGTGGATGGCTCAGATGCAGTATGGCATGCTTTGGGACTTGATATAAATGTGGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG ATGACGATTCCCAGAAGAAAAAGAGAATCCAACACTATAAATCTTTCCAAAGCAATCTCTTCTTGTAACGGGCCATGTCACACCCTAAATGATTGTCAAGGCCAATTAATTTGCATAAACGGAATATGCCAAGATGATCCTAACCTTGGCACACACCTATGTTCCGGTGGAGGAGGATCGGGCCCGCCATCTTCTGGCAATAATGGTTGTCATTCAATTGGAAACTTGAATTGTAAGGGAAAATCATTTCCCCAATTCAAGTGCTCGCCTCCAGTGACTTCCTCTACTCGAGCCGTGCTTACAAATAATGACTTCACCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGTGATGGGCAGTTCCATCATAACTCTGACCCAATAGTGGCGTTGTCCACAGGTTGGTACAATGGAGGATCGAGATGTGGAAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTGTTGGCTAAAGTGGTGGATGAGTGTGATTCTGTGAACGGATGTGACAAGGAGCATGCTCATTTGCCTCCATGTCACAACAATATTGTGGATGGCTCAGATGCAGTATGGCATGCTTTGGGACTTGATATAAATGTGGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG ATGACGATTCCCAGAAGAAAAAGAGAATCCAACACTATAAATCTTTCCAAAGCAATCTCTTCTTGTAACGGGCCATGTCACACCCTAAATGATTGTCAAGGCCAATTAATTTGCATAAACGGAATATGCCAAGATGATCCTAACCTTGGCACACACCTATGTTCCGGTGGAGGAGGATCGGGCCCGCCATCTTCTGGCAATAATGGTTGTCATTCAATTGGAAACTTGAATTGTAAGGGAAAATCATTTCCCCAATTCAAGTGCTCGCCTCCAGTGACTTCCTCTACTCGAGCCGTGCTTACAAATAATGACTTCACCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGTGATGGGCAGTTCCATCATAACTCTGACCCAATAGTGGCGTTGTCCACAGGTTGGTACAATGGAGGATCGAGATGTGGAAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTGTTGGCTAAAGTGGTGGATGAGTGTGATTCTGTGAACGGATGTGACAAGGAGCATGCTCATTTGCCTCCATGTCACAACAATATTGTGGATGGCTCAGATGCAGTATGGCATGCTTTGGGACTTGATATAAATGTGGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG MTIPRRKRESNTINLSKAISSCNGPCHTLNDCQGQLICINGICQDDPNLGTHLCSGGGGSGPPSSGNNGCHSIGNLNCKGKSFPQFKCSPPVTSSTRAVLTNNDFTKGGSGGDPSECDGQFHHNSDPIVALSTGWYNGGSRCGKMIQITATNGRSVLAKVVDECDSVNGCDKEHAHLPPCHNNIVDGSDAVWHALGLDINVGEEPVTWSDA
BLAST of Lsi10G012530 vs. Swiss-Prot
Match: KIWEL_ACTDE (Kiwellin OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 3.6e-74 Identity = 132/193 (68.39%), Postives = 149/193 (77.20%), Query Frame = 1
BLAST of Lsi10G012530 vs. Swiss-Prot
Match: GRI22_VITVI (Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.3e-73 Identity = 135/198 (68.18%), Postives = 153/198 (77.27%), Query Frame = 1
BLAST of Lsi10G012530 vs. Swiss-Prot
Match: RIP2_ORYSJ (Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0637000 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.6e-45 Identity = 96/179 (53.63%), Postives = 120/179 (67.04%), Query Frame = 1
BLAST of Lsi10G012530 vs. Swiss-Prot
Match: RIP1_ORYSJ (Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica GN=Os04g0364800 PE=3 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44 Identity = 89/137 (64.96%), Postives = 105/137 (76.64%), Query Frame = 1
BLAST of Lsi10G012530 vs. Swiss-Prot
Match: RIP4_ORYSJ (Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0490666 PE=3 SV=2) HSP 1 Score: 179.1 bits (453), Expect = 5.1e-44 Identity = 95/174 (54.60%), Postives = 115/174 (66.09%), Query Frame = 1
BLAST of Lsi10G012530 vs. TrEMBL
Match: A0A0A0KBF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147470 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.2e-100 Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 1
BLAST of Lsi10G012530 vs. TrEMBL
Match: K7NBR3_SIRGR (Ripening-related protein OS=Siraitia grosvenorii PE=2 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.5e-90 Identity = 161/200 (80.50%), Postives = 173/200 (86.50%), Query Frame = 1
BLAST of Lsi10G012530 vs. TrEMBL
Match: A0A0A0KDC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G147480 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.1e-85 Identity = 149/199 (74.87%), Postives = 166/199 (83.42%), Query Frame = 1
BLAST of Lsi10G012530 vs. TrEMBL
Match: A0A0A0K532_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G106800 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 8.9e-80 Identity = 141/198 (71.21%), Postives = 165/198 (83.33%), Query Frame = 1
BLAST of Lsi10G012530 vs. TrEMBL
Match: V4SG37_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029991mg PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 7.5e-79 Identity = 140/198 (70.71%), Postives = 159/198 (80.30%), Query Frame = 1
BLAST of Lsi10G012530 vs. NCBI nr
Match: gi|778713247|ref|XP_011657008.1| (PREDICTED: kiwellin-like [Cucumis sativus]) HSP 1 Score: 374.0 bits (959), Expect = 1.7e-100 Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 1
BLAST of Lsi10G012530 vs. NCBI nr
Match: gi|700191649|gb|KGN46853.1| (hypothetical protein Csa_6G147470 [Cucumis sativus]) HSP 1 Score: 374.0 bits (959), Expect = 1.7e-100 Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 1
BLAST of Lsi10G012530 vs. NCBI nr
Match: gi|659130827|ref|XP_008465373.1| (PREDICTED: kiwellin-like [Cucumis melo]) HSP 1 Score: 369.8 bits (948), Expect = 3.2e-99 Identity = 172/198 (86.87%), Postives = 183/198 (92.42%), Query Frame = 1
BLAST of Lsi10G012530 vs. NCBI nr
Match: gi|659130831|ref|XP_008465375.1| (PREDICTED: kiwellin-like [Cucumis melo]) HSP 1 Score: 341.7 bits (875), Expect = 9.4e-91 Identity = 159/205 (77.56%), Postives = 177/205 (86.34%), Query Frame = 1
BLAST of Lsi10G012530 vs. NCBI nr
Match: gi|343466195|gb|AEM42991.1| (ripening-related protein [Siraitia grosvenorii]) HSP 1 Score: 340.5 bits (872), Expect = 2.1e-90 Identity = 161/200 (80.50%), Postives = 173/200 (86.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |